Pregenerated sensors for SYNDIG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074736Ensembl transcript IDs: ENSMUST00000109934.2, ENSMUST00000109935.8, ENSMUST00000137280.2, ENSMUST00000140870.8, ENSMUST00000144179.2, ENSMUST00000149705.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTaGTGCTCCAAGCTGGGGCAGCGTGCTGGGACTGAGCAGGGCCAG | + |
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Preference number: 1 (lower is better) Translates to: SEAPQMCIAGYLQEA*CSKLGQRAGTEQGQ Trigger: CTGGCCCTGCTCAGTCCCAGCACGCTGCCCCAGCTTGGAGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR TCA 90 bp | TCTGCAAGAAGCCTGATGCTCCAAGCTGGGGCAGCGTGCTGGGACTaGGCAGGGCCAGGTCAGGCGTTATGCTCCTCTAATTCTGCATTC | + |
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Preference number: 1 (lower is better) Translates to: SARSLMLQAGAACWD*AGPGQALCSSNSAF Trigger: GAATGCAGAATTAGAGGAGCATAACGCCTGACCTGGCCCTGCTCAGTCCCAGCACGCTGCCCCAGCTTGGAGCATCAGGCTTCTTGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | TCATTCAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTaGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: SFRVSHWDGIFGTSM*KNRQRWLPGALHSA Trigger: AGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | TCAGTGGTGTTCATGGCCAGGATGAGTGTCCAGGAGTTAAACATCTaGTGTGTCTTCACAGCTCCTTTCCCCCAGGCTCCTGGGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SVVFMARMSVQELNI*CVFTAPFPQAPGGK Trigger: TTTTCCCCCAGGAGCCTGGGGGAAAGGAGCTGTGAAGACACACCAGATGTTTAACTCCTGGACACTCATCCTGGCCATGAACACCACTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | TGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAACGCTaGCTGCCTGGTGCTCTGCACAGTGCTGAAGATGAAGTTGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: WDGIFGTSMWKNRQR*LPGALHSAEDEVEG Trigger: TCCTTCAACTTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | CATCCAATAGAATTCATTCAGGGTCAGCCACTGGGATGGAATCTTTaGAACTTCCATGTGGAAGAATCGGCAACGCTGGCTGCCTGGTGC | + |
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Preference number: 1 (lower is better) Translates to: HPIEFIQGQPLGWNL*NFHVEESATLAAWC Trigger: GCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATGAATTCTATTGGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR TCA 90 bp | TCTCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCCCCACTTGTTTCTaGCAAGGAAGCCACAAAGATGGGGTACACATAGAGGATTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: SPSRCFLSLLSPTCF*QGSHKDGVHIEDLS Trigger: GCTTAAATCCTCTATGTGTACCCCATCTTTGTGGCTTCCTTGTCAGAAACAAGTGGGGCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | GTTGTCATCCATCCAATAGAATTCATTCAGGGTCAGCCACTGGGATaGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAACGCTGGCT | + |
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Preference number: 1 (lower is better) Translates to: VVIHPIEFIQGQPLG*NLWNFHVEESATLA Trigger: AGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATGAATTCTATTGGATGGATGACAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR GCA 90 bp | GAACTTCCATGTGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTaGACAGTGCTGAAGATGAAGTTGAAGGATAAAAATGAAAGAACT | + |
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Preference number: 1 (lower is better) Translates to: ELPCGRIGNAGCLVL*TVLKMKLKDKNERT Trigger: AGTTCTTTCATTTTTATCCTTCAACTTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 90 bp | ATTTTAACTGTTTGTATATTGCTAATGGGGTGTTGGTCCAGGCACTaGCAGGCTGCAGAGCTGGGTTGTCATCCATCCAATAGAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: ILTVCILLMGCWSRH*QAAELGCHPSNRIH Trigger: ATGAATTCTATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCCTGGACCAACACCCCATTAGCAATATACAAACAGTTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGATGAACAGGTGTCTCTTCTCTaGCCTCGTACAGCTGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: WKNRQRWLPGALHSAEDEQVSLL*PRTAGL Trigger: CAAGCCAGCTGTACGAGGGCAGAGAAGAGACACCTG...TTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCTGTTGGTCCAGGCACTaGCAGGCTGCAGAGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: VDRVRPISFPGSPTSVVFCWSRH*QAAELG Trigger: ACCCAGCTCTGCAGCCTGCCAGTGCCTGGACCAACA...GAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTGATGCTCAGGCACTGGCAGGCTaGAGAGCTGGGTTGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: LVRPHKCVLLGICKKPDAQALAG*RAGLSS Trigger: GGATGACAACCCAGCTCTGCAGCCTGCCAGTGCCTG...AGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | GTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCGGCTGCCTGGTGCTCTaGACAGTGCTGAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: VDRVRPISFPGSPTSVVFGCLVL*TVLKMK Trigger: CTTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCC...GAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTCATTTAGTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACCAGGCACTGGCAGGCTaGAGAGCTGGGTTGTCATCC | + |
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Preference number: 2 (lower is better) Translates to: SHSFSGQSKAHLISRISNQALAG*RAGLSS Trigger: GGATGACAACCCAGCTCTGCAGCCTGCCAGTGCCTG...GTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCACTAAATGAATGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CAA 90 bp | CCATCCAATAGAATTCATTCAGGGTCAGCCACTGGGATGGAATCTTaGGAACTTCCATGTGGAAGAATCGGCAACGCTGGCTGCCTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PSNRIHSGSATGMES*ELPCGRIGNAGCLV Trigger: CACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATGAATTCTATTGGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CAA 90 bp | GTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTATaGCTGGGTATCTGCAAGAAGCCTGATGCTCCAAGCTGGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VASSPLRLVRPHKCV*LGICKKPDAPSWGS Trigger: GCTGCCCCAGCTTGGAGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTAGGCTGCCTGGTGCTCTaGACAGTGCTGAAGATGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGAVASSPLRLVRPHKCVGCLVL*TVLKMK Trigger: CTTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCC...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGAGATCTCCCAGCAGGTaGTTTCTTTCCCTTCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: RPISFPGSPTSVVFMARMRSPSR*FLSLLS Trigger: GCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGATCT...CATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CAA 90 bp | CAGAAGATCTCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCCCCACTaGTTTCTGACAAGGAAGCCACAAAGATGGGGTACACATAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: QKISQQVLSFPSQPH*FLTRKPQRWGTHRG Trigger: TCCTCTATGTGTACCCCATCTTTGTGGCTTCCTTGTCAGAAACAAGTGGGGCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGATCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTTGCTAATGGGGTGTTaGTCCAGGCACTGGCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: FTRSCGFFSFKISEAPQMLLMGC*SRHWQA Trigger: AGCCTGCCAGTGCCTGGACCAACACCCCATTAGCAA...CATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGTCCAGGAGTTAAACATCTGGTGTGTCTTCACAGCTCCTTTCCCCCAGGCTCCCACAAATGTGTATTaGTGGGTATCTGCAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SVQELNIWCVFTAPFPQAPTNVY*WVSARS Trigger: GCTTCTTGCAGATACCCAGCAATACACATTTGTGGG...AGCCTGGGGGAAAGGAGCTGTGAAGACACACCAGATGTTTAACTCCTGGACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCGTTATGCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGATTCAGGGTCAGCCACTaGGATGGAATCTTTGGAACT | + |
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Preference number: 2 (lower is better) Translates to: VRRYAPLILHSQAGSICGFRVSH*DGIFGT Trigger: AGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAA...TCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGCATAACGCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTGATGCTGGTCAGCCACTGGGATaGAATCTTTGGAACTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: LVRPHKCVLLGICKKPDAGQPLG*NLWNFH Trigger: ATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACC...AGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | TTTACGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGGGCAGGATCCATCTGTaGACAGAGACAGAAGATCTC | + |
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Preference number: 2 (lower is better) Translates to: FTRSCGFFSFKISEAPQMGRIHL*TETEDL Trigger: GAGATCTTCTGTCTCTGTCCACAGATGGATCCTGCC...CATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGACAAATGTGTATTGCTaGGTATCTGCAAGAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: RPISFPGSPTSVVFMARMTNVYC*VSARSL Trigger: CAGGCTTCTTGCAGATACCCAGCAATACACATTTGT...CATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CAA 90 bp | AGGAGTAGAAGATTCCAGGGCATCATGGAGTTGTTTGGCAATCACTaGTACTGTACAGTAACACACAGGTGTCTCTTCTCTGCCCTCGTA | + |
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Preference number: 2 (lower is better) Translates to: RSRRFQGIMELFGNH*YCTVTHRCLFSALV Trigger: TACGAGGGCAGAGAAGAGACACCTGTGTGTTACTGTACAGTACAAGTGATTGCCAAACAACTCCATGATGCCCTGGAATCTTCTACTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | GCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGACAGAGACAGAAGCTGGGATGGAATCTTTaGAACTTCCATGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: APLILHSQAGSICGQRQKLGWNL*NFHVEE Trigger: TTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAG...CTTCTGTCTCTGTCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | GTCAGGCGTTATGCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGAAGGAAGCCACAAAGATaGGGTACACATAGAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: VRRYAPLILHSQAGSICGRKPQR*GTHRGF Trigger: AAATCCTCTATGTGTACCCCATCTTTGTGGCTTCCT...TCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGCATAACGCCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | GTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCAGGAAGCCACAAAGATaGGGTACACATAGAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: VDRVRPISFPGSPTSVVFRKPQR*GTHRGF Trigger: AAATCCTCTATGTGTACCCCATCTTTGTGGCTTCCT...GAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR GCA 90 bp | AGCCATTCATTTAGTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACCCCACAAATGTGTATTaGTGGGTATCTGCAAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SHSFSGQSKAHLISRISNPTNVY*WVSARS Trigger: GCTTCTTGCAGATACCCAGCAATACACATTTGTGGG...GTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCACTAAATGAATGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CCA 90 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTGATGCTCTGGGATGGAATCTTTaGAACTTCCATGTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LVRPHKCVLLGICKKPDALGWNL*NFHVEE Trigger: TTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAG...AGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR TCA 72 bp | CCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTaGTGCTCCAAGCTGGGGCAGCGTGCTGGGACTGAG | + |
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Preference number: 3 (lower is better) Translates to: PQMCIAGYLQEA*CSKLGQRAGTE Trigger: CTCAGTCCCAGCACGCTGCCCCAGCTTGGAGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 72 bp | GTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTaGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: VSHWDGIFGTSM*KNRQRWLPGAL Trigger: CAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR GCA 72 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTaGAAGAAGCCTGATGCTCCAAGCTGGGGCAGCGTG | + |
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Preference number: 3 (lower is better) Translates to: LVRPHKCVLLGI*KKPDAPSWGSV Trigger: CACGCTGCCCCAGCTTGGAGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 72 bp | TGGGGTGTTGGTCCAGGCACTGGCAGGCTGCAGAGCTaGGTTGTCATCCATCCAATAGAATTCATTCAGGGT | + |
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Preference number: 3 (lower is better) Translates to: WGVGPGTGRLQS*VVIHPIEFIQG Trigger: ACCCTGAATGAATTCTATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCCTGGACCAACACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CAA 90 bp | AGTGTCCAGGAGTTAAACATCTGGTGTGTCTTCACAGCTCCTTTCCCCCAGGCTGTGGTGACATGTCTCTaGCATTCTGCCTATTGCACC | + |
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Preference number: 3 (lower is better) Translates to: SVQELNIWCVFTAPFPQAVVTCL*HSAYCT Trigger: GGTGCAATAGGCAGAATGCAAGAGACATGTCACCAC...AGCCTGGGGGAAAGGAGCTGTGAAGACACACCAGATGTTTAACTCCTGGACACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGTGGACAGAGACAGAAGATCTCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCGTGGTGACATGTCTCTaGCATTCTGCCTATTGCACC | + |
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Preference number: 3 (lower is better) Translates to: SVDRDRRSPSRCFLSLLSVVTCL*HSAYCT Trigger: GGTGCAATAGGCAGAATGCAAGAGACATGTCACCAC...GCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGATCTTCTGTCTCTGTCCACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 72 bp | GTTTGTATATTGCTAATGGGGTGTTGGTCCAGGCACTaGCAGGCTGCAGAGCTGGGTTGTCATCCATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: VCILLMGCWSRH*QAAELGCHPSN Trigger: ATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCCTGGACCAACACCCCATTAGCAATATACAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 72 bp | CAGCCCCACTTGTTTCTGACAAGGAAGCCACAAAGATaGGGTACACATAGAGGATTTAAGCGGGCCACAAGC | + |
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Preference number: 3 (lower is better) Translates to: QPHLFLTRKPQR*GTHRGFKRATS Trigger: GCTTGTGGCCCGCTTAAATCCTCTATGTGTACCCCATCTTTGTGGCTTCCTTGTCAGAAACAAGTGGGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CAA 90 bp | GGCACTGGCAGGCTGCAGAGCTGGGTTGTCATCCATCCAATAGAATTCATTCAGCAGGGCATCATGGAGTaGTTTGGCAATCACTTGTAC | + |
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Preference number: 3 (lower is better) Translates to: GTGRLQSWVVIHPIEFIQQGIME*FGNHLY Trigger: GTACAAGTGATTGCCAAACAACTCCATGATGCCCTG...CTGAATGAATTCTATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CAA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTACCTTCTCAGCCCCACTaGTTTCTGACAAGGAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: RGAVASSPLRLVRPHKCVPSQPH*FLTRKP Trigger: TGGCTTCCTTGTCAGAAACAAGTGGGGCTGAGAAGG...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR CCA 72 bp | TCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTaGACAGAGACAGAAGATCTCCCAGCAGGTGCTTTC | + |
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Preference number: 3 (lower is better) Translates to: SSNSAFSGRIHL*TETEDLPAGAF Trigger: GAAAGCACCTGCTGGGAGATCTTCTGTCTCTGTCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| 3UTR-3UTR CAA 90 bp | GTCAGGCGTTATGCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGACAGGGCATCATGGAGTaGTTTGGCAATCACTTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VRRYAPLILHSQAGSICGQGIME*FGNHLY Trigger: GTACAAGTGATTGCCAAACAACTCCATGATGCCCTG...TCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGCATAACGCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR TCA 72 bp | AGGTGCTTTCTTTCCCTTCTCAGCCCCACTTGTTTCTaGCAAGGAAGCCACAAAGATGGGGTACACATAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RCFLSLLSPTCF*QGSHKDGVHIE Trigger: CTCTATGTGTACCCCATCTTTGTGGCTTCCTTGTCAGAAACAAGTGGGGCTGAGAAGGGAAAGAAAGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCATTGTTTGGCAATCACTaGTACTGTACAGTAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: QGQPLGWNLWNFHVEESALFGNH*YCTVTH Trigger: GTGTGTTACTGTACAGTACAAGTGATTGCCAAACAA...TGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGTTGTTTGGCAATCACTaGTACTGTACAGTAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: RPISFPGSPTSVVFMARMLFGNH*YCTVTH Trigger: GTGTGTTACTGTACAGTACAAGTGATTGCCAAACAA...CATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCAGGCGTTATGCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGATTAACTGTTTGTATATaGCTAATGGGGTGTTGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: VRRYAPLILHSQAGSICGLTVCI*LMGCWS Trigger: GGACCAACACCCCATTAGCAATATACAAACAGTTAA...TCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGCATAACGCCTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAACGCTGAGTCCCAGGTaGTCCCGTGGGGGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: QGQPLGWNLWNFHVEESATLSPR*SRGGIM Trigger: CATGATGCCCCCACGGGATCACCTGGGACTCAGCGT...TGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | TGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGATGAAAGTAATGGACAGGACTaGCAGGAACAGGGCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: WKNRQRWLPGALHSAEDESNGQD*QEQGPP Trigger: CGGAGGGCCCTGTTCCTGGCAGTCCTGTCCATTACT...TTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | AACACACAGGTGTCTCTTCTCTGCCCTCGTACAGCTGGCTTGACTCCCCCTCCTTCCGAGAGCTGGTGCTaGCCTGATGGAAGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTQVSLLCPRTAGLTPPPSESWC*PDGSLL Trigger: AAGGAGACTTCCATCAGGCCAGCACCAGCTCTCGGA...AGGAGGGGGAGTCAAGCCAGCTGTACGAGGGCAGAGAAGAGACACCTGTGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGCAGGCTGCAGAGCTGGGTTGTCATCCATCCAATAGAATTCATTCAGGGGCCCTCCGAGAGCTaGTGCTGGCCTGATGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GTGRLQSWVVIHPIEFIQGPSES*CWPDGS Trigger: ACTTCCATCAGGCCAGCACCAGCTCTCGGAGGGCCC...CTGAATGAATTCTATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR CAA 72 bp | ACACAGGTGTCTCTTCTCTGCCCTCGTACAGCTGGCTaGACTCCCCCTCCTTCATGCCAGCATTTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQVSLLCPRTAG*TPPPSCQHLGS Trigger: GCTTCCCAAATGCTGGCATGAAGGAGGGGGAGTCAAGCCAGCTGTACGAGGGCAGAGAAGAGACACCTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGGCACAGGCTCACTTCTaGCTCCTTCCAGGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPISFPGSPTSVVFMARMAQAHF*LLPGCL Trigger: CAGGCAGCCTGGAAGGAGGCAGAAGTGAGCCTGTGC...CATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGATGAATCCCAGGTGATCCCGTaGGGGCATCATGAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: WKNRQRWLPGALHSAEDESQVIP*GHHEEV Trigger: AACTTCCTCATGATGCCCCCACGGGATCACCTGGGA...TTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGAGTGGGCCCTCCGAGAGCTaGTGCTGGCCTGATGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISFPGSPTSVVFMARMSGPSES*CWPDGS Trigger: ACTTCCATCAGGCCAGCACCAGCTCTCGGAGGGCCC...ACTCATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CATTCAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCACGCTGAGTCCCAGGTaGTCCCGTGGGGGCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: HSGSATGMESLELPCGRITLSPR*SRGGIM Trigger: CATGATGCCCCCACGGGATCACCTGGGACTCAGCGT...GATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | TCTGTGGACAGAGACAGAAGATCTCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCTGGAGAGGTAGGCAATaGGGGCAACAGCCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVDRDRRSPSRCFLSLLSWRGRQ*GQQPHP Trigger: TGGGTGTGGCTGTTGCCCTCATTGCCTACCTCTCCA...GCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGATCTTCTGTCTCTGTCCACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGACAGAGACAGAAGTGGAGAGGTAGGCAATaGGGGCAACAGCCACACCCA | + |
|
Preference number: 4 (lower is better) Translates to: APLILHSQAGSICGQRQKWRGRQ*GQQPHP Trigger: TGGGTGTGGCTGTTGCCCTCATTGCCTACCTCTCCA...CTTCTGTCTCTGTCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTAGCACAGGCTCACTTCTaGCTCCTTCCAGGCTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGAVASSPLRLVRPHKCVAQAHF*LLPGCL Trigger: CAGGCAGCCTGGAAGGAGGCAGAAGTGAGCCTGTGC...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | GTCAGGCGTTATGCTCCTCTAATTCTGCATTCTCAGGCAGGATCCATCTGTGGATGGGACTCGACGGACTaGTGCAGAGTGTTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VRRYAPLILHSQAGSICGWDSTD*CRVFGS Trigger: GGACCCAAACACTCTGCAGCAGTCCGTCGAGTCCCA...TCCACAGATGGATCCTGCCTGAGAATGCAGAATTAGAGGAGCATAACGCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAACTCCAGGCTGTCTTTaGTGGGTGACCGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QGQPLGWNLWNFHVEESATPGCL*WVTGPQ Trigger: TTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGT...TGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | GGCACTGGCAGGCTGCAGAGCTGGGTTGTCATCCATCCAATAGAATTCATTCAGTCCCAGGTGATCCCGTaGGGGCATCATGAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTGRLQSWVVIHPIEFIQSQVIP*GHHEEV Trigger: AACTTCCTCATGATGCCCCCACGGGATCACCTGGGA...CTGAATGAATTCTATTGGATGGATGACAACCCAGCTCTGCAGCCTGCCAGTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTCTTCTCTGCCCTCGTACAGCTGGCTTGACTCCCCCTCCTTCATGCCAGATGGAAGTCTCCTTTaGCCACAGCTTTGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVSSLPSYSWLDSPSFMPDGSLL*PQLCLS Trigger: AGACAAACAAAGCTGTGGCCAAAGGAGACTTCCATC...TGGCATGAAGGAGGGGGAGTCAAGCCAGCTGTACGAGGGCAGAGAAGAGACACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGAGTGTGACCGGTCCTCAATaGAGGTGGTCTCACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISFPGSPTSVVFMARMSVTGPQ*RWSHSS Trigger: ACTGCTGTGAGACCACCTTCATTGAGGACCGGTCAC...ACTCATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGGCTCTGGTACTGAGGTaGTGGGTAAACAGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPISFPGSPTSVVFMARMALVLR*WVNRHQ Trigger: CTGGTGTCTGTTTACCCAGCACCTCAGTACCAGAGC...CATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | TCTGTGGACAGAGACAGAAGATCTCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCCTGGTACTGAGGTGCTaGGTAAACAGACACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SVDRDRRSPSRCFLSLLSLVLRC*VNRHQT Trigger: GGTCTGGTGTCTGTTTACCCAGCACCTCAGTACCAG...GCTGAGAAGGGAAAGAAAGCACCTGCTGGGAGATCTTCTGTCTCTGTCCACAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAATCCGAGAGCTGGTGCTaGCCTGATGGAAGTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RVSHWDGIFGTSMWKNRQSESWC*PDGSLL Trigger: AAGGAGACTTCCATCAGGCCAGCACCAGCTCTCGGA...TTGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTAGTGACCGGTCCTCAATaGAGGTGGTCTCACAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGAVASSPLRLVRPHKCVVTGPQ*RWSHSS Trigger: ACTGCTGTGAGACCACCTTCATTGAGGACCGGTCAC...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATTCATTTAGTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACTGGGACTCGACGGACTaGTGCAGAGTGTTTGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSFSGQSKAHLISRISNWDSTD*CRVFGS Trigger: GGACCCAAACACTCTGCAGCAGTCCGTCGAGTCCCA...GTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCACTAAATGAATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | AGCCATTCATTTAGTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACAGTAATGGACAGGACTaGCAGGAACAGGGCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: SHSFSGQSKAHLISRISNSNGQD*QEQGPP Trigger: CGGAGGGCCCTGTTCCTGGCAGTCCTGTCCATTACT...GTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCACTAAATGAATGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | CCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGAGTCTGGTACTGAGGTGCTaGGTAAACAGACACCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: PISFPGSPTSVVFMARMSLVLRC*VNRHQT Trigger: GGTCTGGTGTCTGTTTACCCAGCACCTCAGTACCAG...ACTCATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTAACTCCAGGCTGTCTTTaGTGGGTGACCGGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGAVASSPLRLVRPHKCVTPGCL*WVTGPQ Trigger: TTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGT...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | TGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGATGAAGATGGAAGTCTCCTTTaGCCACAGCTTTGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKNRQRWLPGALHSAEDEDGSLL*PQLCLS Trigger: AGACAAACAAAGCTGTGGCCAAAGGAGACTTCCATC...TTCATCTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR CAA 72 bp | TCCCAGCAGGTGCTTTCTTTCCCTTCTCAGCCCCACTaGTTTCTGACAAGGAAGCCACAAAGATGGGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SQQVLSFPSQPH*FLTRKPQRWGT Trigger: TGTACCCCATCTTTGTGGCTTCCTTGTCAGAAACAAGTGGGGCTGAGAAGGGAAAGAAAGCACCTGCTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | TTTACGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGCCCGTGGGGGCATCATaGGGAAGTTGTCCTCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FTRSCGFFSFKISEAPQMPVGAS*GSCPHF Trigger: AAAGTGAGGACAACTTCCTCATGATGCCCCCACGGG...CATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCGTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTAGCTCTGGTACTGAGGTaGTGGGTAAACAGACACCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGAVASSPLRLVRPHKCVALVLR*WVNRHQ Trigger: CTGGTGTCTGTTTACCCAGCACCTCAGTACCAGAGC...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR GCA 90 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTGATGCTTTTGGGTCCAGCAACTaGTGCACAGGCTCACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LVRPHKCVLLGICKKPDAFGSSN*CTGSLL Trigger: CAGAAGTGAGCCTGTGCAGCAGTTGCTGGACCCAAA...AGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CCA 90 bp | TTAGTGAGGCCCCACAAATGTGTATTGCTGGGTATCTGCAAGAAGCCTGATGCTCACTTTCTGTGTCGCTaGAGTAGTCACTCTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LVRPHKCVLLGICKKPDAHFLCR*SSHSPA Trigger: AGCTGGAGAGTGACTACTCCAGCGACACAGAAAGTG...AGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CCCATCTCATTTCCAGGATCTCCAACATCAGTGGTGTTCATGGCCAGGATGAGTTTTTGCCAGCATCACTaGTCTTACTGTGTACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PISFPGSPTSVVFMARMSFCQHH*SYCVPE Trigger: TTCTGGTACACAGTAAGATCAGTGATGCTGGCAAAA...ACTCATCCTGGCCATGAACACCACTGATGTTGGAGATCCTGGAAATGAGATGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR CAA 72 bp | TCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTATaGCTGGGTATCTGCAAGAAGCCTGATGCTCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPLRLVRPHKCV*LGICKKPDAPS Trigger: GCTTGGAGCATCAGGCTTCTTGCAGATACCCAGCAATACACATTTGTGGGGCCTCACTAATCTTAAAGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| 3UTR CAA 72 bp | AGATTCCAGGGCATCATGGAGTTGTTTGGCAATCACTaGTACTGTACAGTAACACACAGGTGTCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFQGIMELFGNH*YCTVTHRCLFS Trigger: AGAGAAGAGACACCTGTGTGTTACTGTACAGTACAAGTGATTGCCAAACAACTCCATGATGCCCTGGAATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR TCA 90 bp | CCAATAGAATTCATTCAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATTTTTGCCAGCATCACTaGTCTTACTGTGTACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PIEFIQGQPLGWNLWNFHFCQHH*SYCVPE Trigger: TTCTGGTACACAGTAAGATCAGTGATGCTGGCAAAA...ATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTGAATGAATTCTATTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS CCA 90 bp | GCACAGGCTCACTTCTGCCTCCTTCCAGGCTGCCTGGTGCCGCACTaGCCACTAGCCTGTGGCTCTGGTACTGAGGTGCTGGGTAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: AQAHFCLLPGCLVPH*PLACGSGTEVLGKQ Trigger: CTGTTTACCCAGCACCTCAGTACCAGAGCCACAGGCTAGTGGCCAGTGCGGCACCAGGCAGCCTGGAAGGAGGCAGAAGTGAGCCTGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000137280.2 ENSMUST00000140870.8 ENSMUST00000144179.2 ENSMUST00000149705.2 |
||
| CDS-3UTR CAA 90 bp | GGTGTCTCTTCTCTGCCCTCGTACAGCTGGCTTGACTCCCCCTCCTTCATGCCAACTGCTGCAGAGTGTTaGGGTCCAGCAACTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GVSSLPSYSWLDSPSFMPTAAEC*GPATAA Trigger: TGCAGCAGTTGCTGGACCCAAACACTCTGCAGCAGT...TGGCATGAAGGAGGGGGAGTCAAGCCAGCTGTACGAGGGCAGAGAAGAGACACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS TCA 90 bp | GTCGATGAATTTCCCATCGGGGTACTCCAGGCTGTCTTTGGTGGGTaGCCGGTCCTCAATGAAGGTGGTCTCACAGCAGTCAGTGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: VDEFPIGVLQAVFGG*PVLNEGGLTAVSGY Trigger: GTAGCCACTGACTGCTGTGAGACCACCTTCATTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGTACCCCGATGGGAAATTCATCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
||
| CDS-3UTR CAA 90 bp | CCATGTGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGGACAGGGTATGGATTTaGATGTCATCCCCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PCGRIGNAGCLVLCTVLKDRVWI*MSSPER Trigger: CCTCTCAGGGGATGACATCAAAATCCATACCCTGTC...CTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | CGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGTGTATACTCCAGGCTGTCTTaGGTGGGTGACCGGTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: RGAVASSPLRLVRPHKCVYSRLS*VGDRSS Trigger: TGAGGACCGGTCACCCACCAAAGACAGCCTGGAGTA...TACACATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | CCATGTGGAAGAATCGGCAACGCTGGCTGCCTGGTGCTCTGCACAGTGCTGAAGATTAAGCCATTCCTTTaGCCAGCATCACTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: PCGRIGNAGCLVLCTVLKIKPFL*PASLIL Trigger: TAAGATCAGTGATGCTGGCAAAAGGAATGGCTTAAT...CTTCAGCACTGTGCAGAGCACCAGGCAGCCAGCGTTGCCGATTCTTCCACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | CAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAGACAGGGTATGGATTTaGATGTCATCCCCTGAGAGG | + |
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Preference number: 5 (lower is better) Translates to: QGQPLGWNLWNFHVEESADRVWI*MSSPER Trigger: CCTCTCAGGGGATGACATCAAAATCCATACCCTGTC...TGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | AGCCATTCATTTAGTGGACAGAGTAAGGCCCATCTCATTTCCAGGATCTCCAACACTGCTGCAGAGTGTTaGGGTCCAGCAACTGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: SHSFSGQSKAHLISRISNTAAEC*GPATAA Trigger: TGCAGCAGTTGCTGGACCCAAACACTCTGCAGCAGT...GTTGGAGATCCTGGAAATGAGATGGGCCTTACTCTGTCCACTAAATGAATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | TTTACGAGGAGCTGTGGCTTCTTCTCCTTTAAGATTAGTGAGGCCCCACAAATGGGCATCATGAGGAAGTaGTCCTCACTTTCTGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: FTRSCGFFSFKISEAPQMGIMRK*SSLSVS Trigger: CGACACAGAAAGTGAGGACAACTTCCTCATGATGCC...CATTTGTGGGGCCTCACTAATCTTAAAGGAGAAGAAGCCACAGCTCCTCGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | GAAAGAACTCCAGGAGTAGAAGATTCCAGGGCATCATGGAGTTGTTTGGCAATCGGCATCATGAGGAAGTaGTCCTCACTTTCTGTGTCG | + |
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Preference number: 5 (lower is better) Translates to: ERTPGVEDSRASWSCLAIGIMRK*SSLSVS Trigger: CGACACAGAAAGTGAGGACAACTTCCTCATGATGCC...GATTGCCAAACAACTCCATGATGCCCTGGAATCTTCTACTCCTGGAGTTCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS-3UTR CAA 90 bp | CAGGGTCAGCCACTGGGATGGAATCTTTGGAACTTCCATGTGGAAGAATCGGCAATTAAGCCATTCCTTTaGCCAGCATCACTGATCTTA | + |
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Preference number: 5 (lower is better) Translates to: QGQPLGWNLWNFHVEESAIKPFL*PASLIL Trigger: TAAGATCAGTGATGCTGGCAAAAGGAATGGCTTAAT...TGCCGATTCTTCCACATGGAAGTTCCAAAGATTCCATCCCAGTGGCTGACCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS CCA 72 bp | CACTTCTGCCTCCTTCCAGGCTGCCTGGTGCCGCACTaGCCACTAGCCTGTGGCTCTGGTACTGAGGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: HFCLLPGCLVPH*PLACGSGTEVL Trigger: CAGCACCTCAGTACCAGAGCCACAGGCTAGTGGCCAGTGCGGCACCAGGCAGCCTGGAAGGAGGCAGAAGTG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000137280.2 ENSMUST00000140870.8 ENSMUST00000144179.2 ENSMUST00000149705.2 |
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| CDS GCA 72 bp | TGTTTGGGTCCAGCAACTGCTGCACAGGCTCACTTCTaGCTCCTTCCAGGCTGCCTGGTGCCGCACTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: CLGPATAAQAHF*LLPGCLVPHWP Trigger: TGGCCAGTGCGGCACCAGGCAGCCTGGAAGGAGGCAGAAGTGAGCCTGTGCAGCAGTTGCTGGACCCAAACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000137280.2 ENSMUST00000140870.8 ENSMUST00000149705.2 |
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| CDS CCA 72 bp | TGGACAGGACTGCCAGGAACAGGGCCCTCCGAGAGCTaGTGCTGGCCTGATGGAAGTCTCCTTTGGCCACAG | + |
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Preference number: 6 (lower is better) Translates to: WTGLPGTGPSES*CWPDGSLLWPQ Trigger: CTGTGGCCAAAGGAGACTTCCATCAGGCCAGCACCAGCTCTCGGAGGGCCCTGTTCCTGGCAGTCCTGTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS GCA 72 bp | ACAGGACTGCCAGGAACAGGGCCCTCCGAGAGCTGGTaGTGGCCTGATGGAAGTCTCCTTTGGCCACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: TGLPGTGPSESW*WPDGSLLWPQL Trigger: AAGCTGTGGCCAAAGGAGACTTCCATCAGGCCAGCACCAGCTCTCGGAGGGCCCTGTTCCTGGCAGTCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS CCA 72 bp | GGACTGCCAGGAACAGGGCCCTCCGAGAGCTGGTGCTaGCCTGATGGAAGTCTCCTTTGGCCACAGCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: GLPGTGPSESWC*PDGSLLWPQLC Trigger: ACAAAGCTGTGGCCAAAGGAGACTTCCATCAGGCCAGCACCAGCTCTCGGAGGGCCCTGTTCCTGGCAGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS CAA 72 bp | GACGATAGTGGGACTCGACGGACTGCTGCAGAGTGTTaGGGTCCAGCAACTGCTGCACAGGCTCACTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: DDSGTRRTAAEC*GPATAAQAHFC Trigger: GCAGAAGTGAGCCTGTGCAGCAGTTGCTGGACCCAAACACTCTGCAGCAGTCCGTCGAGTCCCACTATCGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000149705.2 |
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| CDS GCA 72 bp | CACATAGATGCCAGTTCCAATAGTAATGGACAGGACTaGCAGGAACAGGGCCCTCCGAGAGCTGGTGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: HIDASSNSNGQD*QEQGPPRAGAG Trigger: GCCAGCACCAGCTCTCGGAGGGCCCTGTTCCTGGCAGTCCTGTCCATTACTATTGGAACTGGCATCTATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS CAA 90 bp | CCTGAGAGGTCGATGAATTTCCCATCGGGGTACTCCAGGCTGTCTTaGGTGGGTGACCGGTCCTCAATGAAGGTGGTCTCACAGCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PERSMNFPSGYSRLS*VGDRSSMKVVSQQS Trigger: TGACTGCTGTGAGACCACCTTCATTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGTACCCCGATGGGAAATTCATCGACCTCTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS TCA 72 bp | ACTCCAGGCTGTCTTTGGTGGGTGACCGGTCCTCAATaGAGGTGGTCTCACAGCAGTCAGTGGCTACACCAT | + |
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Preference number: 6 (lower is better) Translates to: TPGCLWWVTGPQ*RWSHSSQWLHH Trigger: ATGGTGTAGCCACTGACTGCTGTGAGACCACCTTCATTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000149705.2 |
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| CDS CAA 72 bp | TCGATGAATTTCCCATCGGGGTACTCCAGGCTGTCTTaGGTGGGTGACCGGTCCTCAATGAAGGTGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: SMNFPSGYSRLS*VGDRSSMKVVS Trigger: TGAGACCACCTTCATTGAGGACCGGTCACCCACCAAAGACAGCCTGGAGTACCCCGATGGGAAATTCATCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 |
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| CDS CAA 90 bp | CTGCTCTCAGCCATGAAGTTTCTGGTGTTAATTAAGCCATTCCTTTaGCCAGCATCACTGATCTTACTGTGTACCAGAACACTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LLSAMKFLVLIKPFL*PASLILLCTRTLFC Trigger: GCAGAAGAGTGTTCTGGTACACAGTAAGATCAGTGATGCTGGCAAAAGGAATGGCTTAATTAACACCAGAAACTTCATGGCTGAGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000137280.2 ENSMUST00000140870.8 ENSMUST00000144179.2 ENSMUST00000149705.2 |
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| CDS CAA 72 bp | GCCATGAAGTTTCTGGTGTTAATTAAGCCATTCCTTTaGCCAGCATCACTGATCTTACTGTGTACCAGAACA | + |
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Preference number: 6 (lower is better) Translates to: AMKFLVLIKPFL*PASLILLCTRT Trigger: TGTTCTGGTACACAGTAAGATCAGTGATGCTGGCAAAAGGAATGGCTTAATTAACACCAGAAACTTCATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000109934.2 ENSMUST00000109935.8 ENSMUST00000137280.2 ENSMUST00000140870.8 ENSMUST00000144179.2 ENSMUST00000149705.2 |
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