Pregenerated sensors for SYNB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000047977Ensembl transcript IDs: ENSMUST00000059362.3
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTGCTATGGCTaGCAGGGTCCCAGCTCTGCCCCTAACAACTCTGGTAACATCTCC | + |
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Preference number: 1 (lower is better) Translates to: DWLVEDRWSSLACYG*QGPSSAPNNSGNIS Trigger: GGAGATGTTACCAGAGTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 90 bp | TGTGACAATGATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTaGTATGGCTGCCAGGGTCCCAGCTCTGCCCCTAACAACTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: CDNDWLVEDRWSSLA*YGCQGPSSAPNNSG Trigger: ACCAGAGTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATCATTGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | CCTTCCAGCTTCTGGAAGCTCCCTGACACCTCAATGTTCTTCGTATaGGGTCAGAAAGCAAGAAAGACAACGGAGGAACAAGCCACTCCC | + |
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Preference number: 1 (lower is better) Translates to: PSSFWKLPDTSMFFV*GQKARKTTEEQATP Trigger: GGGAGTGGCTTGTTCCTCCGTTGTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAGGTGTCAGGGAGCTTCCAGAAGCTGGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 90 bp | TTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGTaGTCAAGCCTAGCTTGCTATGGCTGCCAGGGTCCCAGCTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: FFTIKCDNDWLVEDR*SSLACYGCQGPSSA Trigger: GGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | CATAGAGAATCCTTGCTGGCCCCCTTCCAGCTTCTGGAAGCTCCCTaGCACCTCAATGTTCTTCGTATGAGGTCAGAAAGCAAGAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: HRESLLAPFQLLEAP*HLNVLRMRSESKKD Trigger: GTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAGGTGTCAGGGAGCTTCCAGAAGCTGGAAGGGGGCCAGCAAGGATTCTCTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 90 bp | GTCGTACATCCTACCCCAGCCTGTGCTCTCCACACCTTGTTCATGTaGTCCAGAAGAGCTCCACCTAAATATTCTACCACATCTACGGAT | + |
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Preference number: 1 (lower is better) Translates to: VVHPTPACALHTLFM*SRRAPPKYSTTSTD Trigger: ATCCGTAGATGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGTGGAGAGCACAGGCTGGGGTAGGATGTACGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 90 bp | AGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTCCCTTaGAGAAGAGACCAGACTGGAACAATGATGGTAGGAAGGGCGGGG | + |
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Preference number: 1 (lower is better) Translates to: RKRLHTTLIMCQTVP*RRDQTGTMMVGRAG Trigger: CCCCGCCCTTCCTACCATCATTGTTCCAGTCTGGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 90 bp | AGGCAGGGGTTAGAGTTGAGAATTCCATCTGGAATTGGAGAAGGCTaGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACA | + |
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Preference number: 1 (lower is better) Translates to: RQGLELRIPSGIGEG*GLLGGAYLSGRDYT Trigger: TGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATTCTCAACTCTAACCCCTGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | ATCCCAGCAACCACATGGTGGCTCACAACCATCTGTAACAAGATCTaGAGCCCTCTTCTGGAGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: IPATTWWLTTICNKI*SPLLECLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGCTTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | CTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAACTCTaGTCATGTGTCAGACAGTCCCTTGCAGAAGAGACCAGACTGGAA | + |
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Preference number: 1 (lower is better) Translates to: LLGGAYLSGRDYTQL*SCVRQSLAEETRLE Trigger: TTCCAGTCTGGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | GACAGAACTACCTCAGTTTACTGGGCTTTCTTTGAATGCAGGCAGTaGCAGGCAGGGGTTAGAGTTGAGAATTCCATCTGGAATTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: DRTTSVYWAFFECRQ*QAGVRVENSIWNWR Trigger: TCTCCAATTCCAGATGGAATTCTCAACTCTAACCCCTGCCTGTCACTGCCTGCATTCAAAGAAAGCCCAGTAAACTGAGGTAGTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 90 bp | TTCCTTCTTTGGCCATTGCTAAGAGTAGCTAAGCAGCAAGGTGAGTaGTGGATTAAAGAATGTCAGGTGAAACAACTCCAGAGGCCATGT | + |
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Preference number: 1 (lower is better) Translates to: FLLWPLLRVAKQQGE*WIKECQVKQLQRPC Trigger: ACATGGCCTCTGGAGTTGTTTCACCTGACATTCTTTAATCCATCACTCACCTTGCTGCTTAGCTACTCTTAGCAATGGCCAAAGAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | AATTCCATCTGGAATTGGAGAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCTCCCTCCCTTCCCTGTaGTCCTCTTGCCCATCCCAG | + |
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Preference number: 2 (lower is better) Translates to: NSIWNWRRLGPVRRSLPLSLPSL*SSCPSQ Trigger: CTGGGATGGGCAAGAGGACCACAGGGAAGGGAGGGA...GAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCCATCCCAGTTACCAGGCCCAGCTCAGTCGTACATCCTACCCCAGCCTGTGTCAATGTTCTTCGTATaGGGTCAGAAAGCAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: CPSQLPGPAQSYILPQPVSMFFV*GQKARK Trigger: CTTTCTTGCTTTCTGACCTCATACGAAGAACATTGA...CACAGGCTGGGGTAGGATGTACGACTGAGCTGGGCCTGGTAACTGGGATGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAGAACAAGCCACTCCCTaGCAGCACAGGCCTGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: FLFKPKPHVRTQSVDFVREQATP*QHRPGS Trigger: GCTCCCAGGCCTGTGCTGCCAGGGAGTGGCTTGTTC...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGCTTTCTTTGAATGCAGGCAGTGACAGGCAGGGGTTAGAGTTGAGAATTCCCCCTTCCAGCTTCTaGAAGCTCCCTGACACCTCA | + |
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Preference number: 2 (lower is better) Translates to: TGLSLNAGSDRQGLELRIPPSSF*KLPDTS Trigger: TGAGGTGTCAGGGAGCTTCCAGAAGCTGGAAGGGGG...AATTCTCAACTCTAACCCCTGCCTGTCACTGCCTGCATTCAAAGAAAGCCCAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | AATGATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTGCTATGGCTGCCAGATAGAGAATCCTTGCTaGCCCCCTTCCAGCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NDWLVEDRWSSLACYGCQIENPC*PPSSFW Trigger: CCAGAAGCTGGAAGGGGGCCAGCAAGGATTCTCTAT...CTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATCATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | CTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAGAGAAGCCTAGCTTGCTATaGCTGCCAGGGTCCCAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LFKPKPHVRTQSVDFVREKPSLL*LPGSQL Trigger: GAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTT...CTCTCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CAA 90 bp | ACTGGGCTTTCTTTGAATGCAGGCAGTGACAGGCAGGGGTTAGAGTaGAGAATTCCATCTGGAATTGGAGAAGGCTGGGGCCTGTTAGGA | + |
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Preference number: 2 (lower is better) Translates to: TGLSLNAGSDRQGLE*RIPSGIGEGWGLLG Trigger: TCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATTCTCAACTCTAACCCCTGCCTGTCACTGCCTGCATTCAAAGAAAGCCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAACACACCTTGTTCATGTaGTCCAGAAGAGCTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQHTLFM*SRRAPP Trigger: AGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGTG...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTCTAGCTTGCTATGGCTaGCAGGGTCCCAGCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: ELTSQEEITHNSDHVSDSLACYG*QGPSSA Trigger: GGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAG...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | CTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAGAGCTGGCAGCACAGGCCTaGGAGCAGAGATCTCTGTAT | + |
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Preference number: 2 (lower is better) Translates to: LFKPKPHVRTQSVDFVRELAAQA*EQRSLY Trigger: ATACAGAGATCTCTGCTCCCAGGCCTGTGCTGCCAG...CTCTCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CAA 90 bp | AGCTCTGCCCCTAACAACTCTGGTAACATCTCCAGCATGAACGTCTaGCTCTTACCTCTGGAATCCTCTCTCGCCATCCACTCTTTCATC | + |
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Preference number: 2 (lower is better) Translates to: SSAPNNSGNISSMNV*LLPLESSLAIHSFI Trigger: GATGAAAGAGTGGATGGCGAGAGAGGATTCCAGAGGTAAGAGCAAGACGTTCATGCTGGAGATGTTACCAGAGTTGTTAGGGGCAGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CAA 90 bp | CAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTCCCTaGCAGAAGAGACCAGACTGGAACAATGATGGTAGGAAGGGCGGG | + |
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Preference number: 2 (lower is better) Translates to: QEEITHNSDHVSDSP*QKRPDWNNDGRKGG Trigger: CCCGCCCTTCCTACCATCATTGTTCCAGTCTGGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CAA 90 bp | CAGAAGAGACCAGACTGGAACAATGATGGTAGGAAGGGCGGGGTCTaGGACAGGTCTGCTTCCTTATGCCTGTCTCTTGCTTTCTATTTA | + |
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Preference number: 2 (lower is better) Translates to: QKRPDWNNDGRKGGV*DRSASLCLSLAFYL Trigger: TAAATAGAAAGCAAGAGACAGGCATAAGGAAGCAGACCTGTCCAAGACCCCGCCCTTCCTACCATCATTGTTCCAGTCTGGTCTCTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | AATTCCATCTGGAATTGGAGAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCGATTACACACAACTCTaGTCATGTGTCAGACAGTCC | + |
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Preference number: 2 (lower is better) Translates to: NSIWNWRRLGPVRRSLPLDYTQL*SCVRQS Trigger: GGACTGTCTGACACATGATCAGAGTTGTGTGTAATC...GAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR GCA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTGTCATAGAGAATCCTTaGTGGCCCCCTTCCAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: ELTSQEEITHNSDHVSDSVIENP*WPPSSF Trigger: GAAGCTGGAAGGGGGCCAGCAAGGATTCTCTATGAC...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | ACACCTTGTTCATGTGCTCCAGAAGAGCTCCACCTAAATATTCTACCACATCTAGGTAAGATGGCTCAGTaGGTAAGAGCACCCGACTGC | + |
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Preference number: 2 (lower is better) Translates to: TPCSCAPEELHLNILPHLGKMAQ*VRAPDC Trigger: GCAGTCGGGTGCTCTTACCCACTGAGCCATCTTACC...TAGATGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | ACTGGGCTTTCTTTGAATGCAGGCAGTGACAGGCAGGGGTTAGAGTTGAGAATTATCTGTAACAAGATCTaGAGCCCTCTTCTGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: TGLSLNAGSDRQGLELRIICNKI*SPLLEC Trigger: ACACTCCAGAAGAGGGCTTCAGATCTTGTTACAGAT...AATTCTCAACTCTAACCCCTGCCTGTCACTGCCTGCATTCAAAGAAAGCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAAAAAGTGCTGCTATGCTaGCAGCTTGAAACTACATAT | + |
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Preference number: 2 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQKVLLC*QLETTY Trigger: ATATGTAGTTTCAAGCTGTCAGCATAGCAGCACTTT...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTCTTGTTGAGGACAGGTaGTCAAGCCTAGCTTGCTAT | + |
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Preference number: 2 (lower is better) Translates to: ELTSQEEITHNSDHVSDSLVEDR*SSLACY Trigger: ATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAG...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGATTAAAGAATGTCAGGTaGAACAACTCCAGAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRLKNVR*NNSRGH Trigger: ATGGCCTCTGGAGTTGTTTCACCTGACATTCTTTAA...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGATTGGATTCTATTAACTaGGTAGAAGGGAGGGTATAC | + |
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Preference number: 2 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRLDSIN*VEGRVY Trigger: GTATACCCTCCCTTCTACCCAGTTAATAGAATCCAA...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGAAGGGAGGGTATACTTaGTGCTCTCTCAACTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRKGGYT*CSLNFS Trigger: GGAAAAGTTGAGAGAGCACCAAGTATACCCTCCCTT...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGTCTACGGATCAGAGTTaGTTCATGAGTCTTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRSTDQS*FMSLGS Trigger: AGATCCAAGACTCATGAATCAACTCTGATCCGTAGA...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGAAAACATTCCTTCTTTaGCCATTGCTAAGAGTAGCT | + |
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Preference number: 2 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRKTFLL*PLLRVA Trigger: AGCTACTCTTAGCAATGGCCAAAGAAGGAATGTTTT...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 72 bp | GTTGAGGACAGGTGGTCAAGCCTAGCTTGCTATGGCTaGCAGGGTCCCAGCTCTGCCCCTAACAACTCTGGT | + |
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Preference number: 3 (lower is better) Translates to: VEDRWSSLACYG*QGPSSAPNNSG Trigger: ACCAGAGTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 72 bp | GATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTaGTATGGCTGCCAGGGTCCCAGCTCTGCCCCTAAC | + |
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Preference number: 3 (lower is better) Translates to: DWLVEDRWSSLA*YGCQGPSSAPN Trigger: GTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 72 bp | AACGGAGGAACAAGCCACTCCCTGGCAGCACAGGCCTaGGAGCAGAGATCTCTGTATAAGAGAGCCCACTCT | + |
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Preference number: 3 (lower is better) Translates to: NGGTSHSLAAQA*EQRSLYKRAHS Trigger: AGAGTGGGCTCTCTTATACAGAGATCTCTGCTCCCAGGCCTGTGCTGCCAGGGAGTGGCTTGTTCCTCCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CAA 90 bp | TGCCCATCCCAGTTACCAGGCCCAGCTCAGTCGTACATCCTACCCCAGCCTGTGGAAGGGAGGGTATACTaGGTGCTCTCTCAACTTTTC | + |
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Preference number: 3 (lower is better) Translates to: CPSQLPGPAQSYILPQPVEGRVY*VLSQLF Trigger: GAAAAGTTGAGAGAGCACCAAGTATACCCTCCCTTC...CACAGGCTGGGGTAGGATGTACGACTGAGCTGGGCCTGGTAACTGGGATGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR TCA 72 bp | TCCTTGCTGGCCCCCTTCCAGCTTCTGGAAGCTCCCTaGCACCTCAATGTTCTTCGTATGAGGTCAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: SLLAPFQLLEAP*HLNVLRMRSES Trigger: GCTTTCTGACCTCATACGAAGAACATTGAGGTGTCAGGGAGCTTCCAGAAGCTGGAAGGGGGCCAGCAAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 72 bp | CTCTCTCTCTCTCTCAAAGCTGTCATAGAGAATCCTTaGTGGCCCCCTTCCAGCTTCTGGAAGCTCCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: LSLSLKAVIENP*WPPSSFWKLPD Trigger: GTCAGGGAGCTTCCAGAAGCTGGAAGGGGGCCAGCAAGGATTCTCTATGACAGCTTTGAGAGAGAGAGAGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 72 bp | TCTCTCTCTCTCAAAGCTGTCATAGAGAATCCTTGCTaGCCCCCTTCCAGCTTCTGGAAGCTCCCTGACACC | + |
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Preference number: 3 (lower is better) Translates to: SLSLKAVIENPC*PPSSFWKLPDT Trigger: GGTGTCAGGGAGCTTCCAGAAGCTGGAAGGGGGCCAGCAAGGATTCTCTATGACAGCTTTGAGAGAGAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 72 bp | AAAGCAAGAAAGACAACGGAGGAACAAGCCACTCCCTaGCAGCACAGGCCTGGGAGCAGAGATCTCTGTATA | + |
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Preference number: 3 (lower is better) Translates to: KARKTTEEQATP*QHRPGSRDLCI Trigger: TATACAGAGATCTCTGCTCCCAGGCCTGTGCTGCCAGGGAGTGGCTTGTTCCTCCGTTGTCTTTCTTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 72 bp | CAGACTGGAACAATGATGGTAGGAAGGGCGGGGTCTTaGACAGGTCTGCTTCCTTATGCCTGTCTCTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: QTGTMMVGRAGS*TGLLPYACLLL Trigger: AAGCAAGAGACAGGCATAAGGAAGCAGACCTGTCCAAGACCCCGCCCTTCCTACCATCATTGTTCCAGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR-3UTR CAA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAATGTCATAGAGAATCCTaGCTGGCCCCCTTCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQCHRES*LAPFQL Trigger: AAGCTGGAAGGGGGCCAGCAAGGATTCTCTATGACA...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR GCA 72 bp | CCTACCCCAGCCTGTGCTCTCCACACCTTGTTCATGTaGTCCAGAAGAGCTCCACCTAAATATTCTACCACA | + |
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Preference number: 3 (lower is better) Translates to: PTPACALHTLFM*SRRAPPKYSTT Trigger: TGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGTGGAGAGCACAGGCTGGGGTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| 3UTR CCA 72 bp | TGTCAGGTGAAACAACTCCAGAGGCCATGTCTGAGATaGGGGCTACTGATAAGGAGAAGATCTAGAAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: CQVKQLQRPCLR*GLLIRRRSRRS Trigger: GCTCCTTCTAGATCTTCTCCTTATCAGTAGCCCCCATCTCAGACATGGCCTCTGGAGTTGTTTCACCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR TCA 72 bp | GGAGCTTACCTCTCAGGAAGAGATTACACACAACTCTaGTCATGTGTCAGACAGTCCCTTGCAGAAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: GAYLSGRDYTQL*SCVRQSLAEET Trigger: GGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR CCA 72 bp | TTAGAGTTGAGAATTCCATCTGGAATTGGAGAAGGCTaGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LELRIPSGIGEG*GLLGGAYLSGR Trigger: TCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATTCTCAACTCTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAAGAAAACATTCCTTCTTaGGCCATTGCTAAGAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQENIPS*AIAKSS Trigger: GCTACTCTTAGCAATGGCCAAAGAAGGAATGTTTTC...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR TCA 72 bp | TTCTGGAAGCTCCCTGACACCTCAATGTTCTTCGTATaGGGTCAGAAAGCAAGAAAGACAACGGAGGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: FWKLPDTSMFFV*GQKARKTTEEQ Trigger: TTGTTCCTCCGTTGTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAGGTGTCAGGGAGCTTCCAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR GCA 72 bp | TTACACACAACTCTGATCATGTGTCAGACAGTCCCTTaGAGAAGAGACCAGACTGGAACAATGATGGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LHTTLIMCQTVP*RRDQTGTMMVG Trigger: TCCTACCATCATTGTTCCAGTCTGGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGATTCCTTCTTTGGCCATaGCTAAGAGTAGCTAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRFLLWP*LRVAKQ Trigger: CTGCTTAGCTACTCTTAGCAATGGCCAAAGAAGGAA...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR TCA 72 bp | TGGCCATTGCTAAGAGTAGCTAAGCAGCAAGGTGAGTaGTGGATTAAAGAATGTCAGGTGAAACAACTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: WPLLRVAKQQGE*WIKECQVKQLQ Trigger: CTGGAGTTGTTTCACCTGACATTCTTTAATCCATCACTCACCTTGCTGCTTAGCTACTCTTAGCAATGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGCCACTCTTTCATCCCTaGACTTCTCCTTTCTCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRPLFHP*TSPFSP Trigger: AGGAGAGAAAGGAGAAGTCAAGGGATGAAAGAGTGG...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR TCA 72 bp | CCACCTAAATATTCTACCACATCTACGGATCAGAGTTaGTTCATGAGTCTTGGATCTACAGTACCAAAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PPKYSTTSTDQS*FMSLGSTVPKC Trigger: GCACTTTGGTACTGTAGATCCAAGACTCATGAATCAACTCTGATCCGTAGATGTGGTAGAATATTTAGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | TGGTCAAGCCTAGCTTGCTATGGCTGCCAGGGTCCCAGCTCTGCCCCTAACAACACCGGACCAATTGGCTaGGAGGCAGATGTAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WSSLACYGCQGPSSAPNNTGPIG*EADVSR Trigger: TCGACTTACATCTGCCTCCCAGCCAATTGGTCCGGT...GTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGAGCAGAGATCTCTGTATAAGAGAGCCCACTCTCCACCTACAGGCAGGTCTCAGTAAAGAGTaGTCCCCAGAGAGGGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RPGSRDLCIREPTLHLQAGLSKE*SPERAL Trigger: CAACGCCCTCTCTGGGGACCACTCTTTACTGAGACC...TGCCTGTAGGTGGAGAGTGGGCTCTCTTATACAGAGATCTCTGCTCCCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGAGCAGAGATCTCTGTATAAGAGAGCCCACTCTCCACCTACAGGCAGGGTCTCTGTGCCCCTaGAGTTTGACCTTGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGSRDLCIREPTLHLQAGSLCP*SLTLKW Trigger: CCACTTCAAGGTCAAACTCCAGGGGCACAGAGACCC...TGCCTGTAGGTGGAGAGTGGGCTCTCTTATACAGAGATCTCTGCTCCCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAAAGGAAGGGAAAGAGGTaGGGGGACCTCTTTGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQRKGKR*GDLFGR Trigger: TCGCCCAAAGAGGTCCCCTCACCTCTTTCCCTTCCT...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR GCA 90 bp | TGGTCAAGCCTAGCTTGCTATGGCTGCCAGGGTCCCAGCTCTGCCCCTAACAACGAGAGGCAGAGAGGTTaGCTACAAAAGTGGCATATG | + |
|
Preference number: 4 (lower is better) Translates to: WSSLACYGCQGPSSAPNNERQRG*LQKWHM Trigger: CATATGCCACTTTTGTAGGCAACCTCTCTGCCTCTC...GTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR CAA 72 bp | CCAGACTGGAACAATGATGGTAGGAAGGGCGGGGTCTaGGACAGGTCTGCTTCCTTATGCCTGTCTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PDWNNDGRKGGV*DRSASLCLSLA Trigger: AGCAAGAGACAGGCATAAGGAAGCAGACCTGTCCAAGACCCCGCCCTTCCTACCATCATTGTTCCAGTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGAGCAGAGATCTCTGTATAAGAGAGCCCACTCTCCACCTACAGGCAAGCAGACCCAACAGTTaGAAAACAGGGAAGAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGSRDLCIREPTLHLQASRPNS*KTGKSW Trigger: CCAACTCTTCCCTGTTTTCCAACTGTTGGGTCTGCT...TGCCTGTAGGTGGAGAGTGGGCTCTCTTATACAGAGATCTCTGCTCCCAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | GGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCTCACGTAGGATGTGGTaGGTGAGGTTTACAAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVRRSLPLRKRLHTTLISRRMW*VRFTRG Trigger: GCCCCTTGTAAACCTCACTCACCACATCCTACGTGA...GATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR GCA 90 bp | AGGCCATGTCTGAGATGGGGGCTACTGATAAGGAGAAGATCTAGAAGGAGCAGAAGAGATACCCAGGCCTaGAAGGAAGGGAAAGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RPCLRWGLLIRRRSRRSRRDTQA*KEGKEV Trigger: CACCTCTTTCCCTTCCTTGCAGGCCTGGGTATCTCT...TCTGCTCCTTCTAGATCTTCTCCTTATCAGTAGCCCCCATCTCAGACATGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGAGCAGAGATCTCTGTATAAGAGAGCCCACTCTCCACCTACAGGCAGCACCGTTTGGTTATTaGGGAGAAGTTCAATATCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPGSRDLCIREPTLHLQAAPFGY*GEVQYP Trigger: CGGATATTGAACTTCTCCCCAATAACCAAACGGTGC...TGCCTGTAGGTGGAGAGTGGGCTCTCTTATACAGAGATCTCTGCTCCCAGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR CAA 72 bp | GTCGTACATCCTACCCCAGCCTGTGCTCTCCACACCTaGTTCATGTGCTCCAGAAGAGCTCCACCTAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: VVHPTPACALHT*FMCSRRAPPKY Trigger: ATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGTGGAGAGCACAGGCTGGGGTAGGATGTACGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCATGTCTGAGATGGGGGCTACTGATAAGGAGAAGATCTAGAAGGAGCAGAAGGTATGGCAGTGTTTaGTGTCTGTTGGGCAGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RPCLRWGLLIRRRSRRSRRYGSV*CLLGRD Trigger: ATCCCTGCCCAACAGACATCAAACACTGCCATACCT...TCTGCTCCTTCTAGATCTTCTCCTTATCAGTAGCCCCCATCTCAGACATGGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR CAA 72 bp | CCTAACAACTCTGGTAACATCTCCAGCATGAACGTCTaGCTCTTACCTCTGGAATCCTCTCTCGCCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PNNSGNISSMNV*LLPLESSLAIH Trigger: GTGGATGGCGAGAGAGGATTCCAGAGGTAAGAGCAAGACGTTCATGCTGGAGATGTTACCAGAGTTGTTAGG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | GAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAATTTTCATTGCCTGTTTaGACGTATGGGTGGTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EGWGLLGGAYLSGRDYTQFSLPV*TYGWWK Trigger: TTTCCACCACCCATACGTTCAAACAGGCAATGAAAA...TTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | AGGCCATGTCTGAGATGGGGGCTACTGATAAGGAGAAGATCTAGAAGGAGCAGACTGGTTCAAATAAAGTaGGGTTATAGCAGGTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPCLRWGLLIRRRSRRSRLVQIK*GYSRCR Trigger: TCGGCACCTGCTATAACCTCACTTTATTTGAACCAG...TCTGCTCCTTCTAGATCTTCTCCTTATCAGTAGCCCCCATCTCAGACATGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCGCGGGTTTTTCCATTTaGCATCCGGTCTTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GPVRRSLPLRKRLHTTLIAGFSI*HPVFSL Trigger: CAATGAAAAGACCGGATGCCAAATGGAAAAACCCGC...GATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAAGACACCGGACCAATTaGCTGGGAGGCAGATGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRRHRTN*LGGRCK Trigger: CTTACATCTGCCTCCCAGCCAATTGGTCCGGTGTCT...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGTTAGGAGGAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCTGTCCACATGCCTTTTaGCAGTGTCTTGAACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVRRSLPLRKRLHTTLICPHAF*QCLEQR Trigger: CCTTTGTTCAAGACACTGCCAAAAGGCATGTGGACA...GATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTCCTCCTAACAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | ACTGGGCTTTCTTTGAATGCAGGCAGTGACAGGCAGGGGTTAGAGTTGAGAATTAGTTTGACCTTGAAGTaGGTAGGGTTCACTGACATG | + |
|
Preference number: 4 (lower is better) Translates to: TGLSLNAGSDRQGLELRISLTLK*VGFTDM Trigger: CATGTCAGTGAACCCTACCCACTTCAAGGTCAAACT...AATTCTCAACTCTAACCCCTGCCTGTCACTGCCTGCATTCAAAGAAAGCCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | CTCAATGTTCTTCGTATGAGGTCAGAAAGCAAGAAAGACAACGGAGGAACAAGCAAGGAGCCAAGTCTCTaGGACACAAAACGGGTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LNVLRMRSESKKDNGGTSKEPSL*DTKRVR Trigger: CCTAACCCGTTTTGTGTCCCAGAGACTTGGCTCCTT...GCTTGTTCCTCCGTTGTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | CTCAATGTTCTTCGTATGAGGTCAGAAAGCAAGAAAGACAACGGAGGAACAAGCCTTTTGGCAGTGTCTTaGACAAAGGAGCCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVLRMRSESKKDNGGTSLLAVS*TKEPSL Trigger: GAGACTTGGCTCCTTTGTTCAAGACACTGCCAAAAG...GCTTGTTCCTCCGTTGTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGAAGCAGCACTCTTCCTaGAGGAAGAGACAGGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRKQHSS*RKRQVP Trigger: GGGCACCTGTCTCTTCCTCCAGGAAGAGTGCTGCTT...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| 3UTR CAA 72 bp | ATTACACACAACTCTGATCATGTGTCAGACAGTCCCTaGCAGAAGAGACCAGACTGGAACAATGATGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITHNSDHVSDSP*QKRPDWNNDGR Trigger: CCTACCATCATTGTTCCAGTCTGGTCTCTTCTGCAAGGGACTGTCTGACACATGATCAGAGTTGTGTGTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | ACACCTTGTTCATGTGCTCCAGAAGAGCTCCACCTAAATATTCTACCACATCTAGTTGAGCTGACGAGTTaGAGAAAAGCAATCGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TPCSCAPEELHLNILPHLVELTS*RKAIAL Trigger: AAGGGCGATTGCTTTTCTTCAACTCGTCAGCTCAAC...TAGATGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAAGGCGTACGAGAAGCTaGGAAGATGTGAGAAAATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRRRTRS*EDVRKC Trigger: ACATTTTCTCACATCTTCTCAGCTTCTCGTACGCCT...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGTCAGATGCTCGTTCTTaGAGTTTCCTTGCCGCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRSDARS*SFLAAS Trigger: GGACGCGGCAAGGAAACTCCAAGAACGAGCATCTGA...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTATATGCCTGTTGAGCTaGCGAGTTGAAGAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: ELTSQEEITHNSDHVSDSICLLS*RVEEKQ Trigger: TTGCTTTTCTTCAACTCGTCAGCTCAACAGGCATAT...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAAAAAGTGGCATATGCTaGGACCTTGAAAAAGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRKSGIC*DLEKAR Trigger: TCTCGCTTTTTCAAGGTCTCAGCATATGCCACTTTT...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR TCA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTAGAAAATGTTGGAGGTaGTGTCCCAGTTTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELTSQEEITHNSDHVSDSRKCWR*CPSFLG Trigger: TCCAAGAAAACTGGGACATCACCTCCAACATTTTCT...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGGTGTTTGATGTCTGTTaGGCAGGGATAGTAAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRVFDVC*AGIVSR Trigger: CCGGCTTACTATCCCTGCCCAACAGACATCAAACAC...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CCA 90 bp | GGAAGCTCCCTGACACCTCAATGTTCTTCGTATGAGGTCAGAAAGCAAGAAAGATTATATTGGAAATTTTaGAGGATGCTGTCCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSSLTPQCSSYEVRKQERLYWKF*RMLSTC Trigger: GCATGTGGACAGCATCCTCCAAAATTTCCAATATAA...TCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAGGTGTCAGGGAGCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR GCA 90 bp | TTCTTTCTGTTCTTCACTATTAAGTGTGACAATGATTGGCTTGTTGAGGACAGGATCCGGTCTTTTCATTaGCTGTTTGAACGTATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FFLFFTIKCDNDWLVEDRIRSFH*LFERMG Trigger: ACCCATACGTTCAAACAGGCAATGAAAAGACCGGAT...CCTGTCCTCAACAAGCCAATCATTGTCACACTTAATAGTGAAGAACAGAAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS TCA 90 bp | CCAAGGGCAGAAGAGATACCCAGGCCTGCAAGGAAGGGAAAGAGGTaGGGGGACCTCTTTGGGCGAAGAACTGAGTCTGAGGAAAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: PRAEEIPRPARKGKR*GDLFGRRTESEERT Trigger: AGTTCTTTCCTCAGACTCAGTTCTTCGCCCAAAGAGGTCCCCTCACCTCTTTCCCTTCCTTGCAGGCCTGGGTATCTCTTCTGCCCTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CAA 90 bp | TGGTCAAGCCTAGCTTGCTATGGCTGCCAGGGTCCCAGCTCTGCCCCTAACAACAAGCAGACCCAACAGTaGGAAAACAGGGAAGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSLACYGCQGPSSAPNNKQTQQ*ENREEL Trigger: CAACTCTTCCCTGTTTTCCAACTGTTGGGTCTGCTT...GTTGTTAGGGGCAGAGCTGGGACCCTGGCAGCCATAGCAAGCTAGGCTTGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CAA 90 bp | CTCAATGTTCTTCGTATGAGGTCAGAAAGCAAGAAAGACAACGGAGGAACAAGCCTGTGCCCCTGGAGTTaGACCTTGAAGTGGGTAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LNVLRMRSESKKDNGGTSLCPWS*TLKWVG Trigger: CCCTACCCACTTCAAGGTCAAACTCCAGGGGCACAG...GCTTGTTCCTCCGTTGTCTTTCTTGCTTTCTGACCTCATACGAAGAACATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CAA 90 bp | AATGATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTGCTATGGCTGCCAGCCTTTTGGCAGTGTCTaGAACAAAGGAGCCAAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NDWLVEDRWSSLACYGCQPFGSV*NKGAKS Trigger: AGACTTGGCTCCTTTGTTCAAGACACTGCCAAAAGG...CTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
||
| CDS-3UTR CAA 90 bp | AATTCCATCTGGAATTGGAGAAGGCTGGGGCCTGTTAGGAGGAGCTTACCTCTCAGCGGGTTTTTCCATTaGGCATCCGGTCTTTTCATT | + |
|
Preference number: 5 (lower is better) Translates to: NSIWNWRRLGPVRRSLPLSGFFH*ASGLFI Trigger: AATGAAAAGACCGGATGCCAAATGGAAAAACCCGCT...GAGAGGTAAGCTCCTCCTAACAGGCCCCAGCCTTCTCCAATTCCAGATGGAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGAGAGGTATGGCAGTGTTaGATGTCTGTTGGGCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: FLFKPKPHVRTQSVDFVREVWQC*MSVGQG Trigger: TCCCTGCCCAACAGACATCAAACACTGCCATACCTC...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | ACACCTTGTTCATGTGCTCCAGAAGAGCTCCACCTAAATATTCTACCACATCTAGTTCTTGGAGTTTCCTaGCCGCGTCCCGGACTATTC | + |
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Preference number: 5 (lower is better) Translates to: TPCSCAPEELHLNILPHLVLGVS*PRPGLF Trigger: GAATAGTCCGGGACGCGGCAAGGAAACTCCAAGAAC...TAGATGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 90 bp | AGGAAAGAACTGAAGCAAAAAGGGGAACAGGCACCGTTTGGTTATTaGGGAGAAGTTCAATATCCGGGTATTGGAAGACCAGGGTACAGA | + |
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Preference number: 5 (lower is better) Translates to: RKELKQKGEQAPFGY*GEVQYPGIGRPGYR Trigger: TCTGTACCCTGGTCTTCCAATACCCGGATATTGAACTTCTCCCCAATAACCAAACGGTGCCTGTTCCCCTTTTTGCTTCAGTTCTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | AGGCCATGTCTGAGATGGGGGCTACTGATAAGGAGAAGATCTAGAAGGAGCAGAAACCTTAGAAAGCTGTaGGAAATAGAGAGTCGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RPCLRWGLLIRRRSRRSRNLRKL*EIESRG Trigger: ACCTCGACTCTCTATTTCCAACAGCTTTCTAAGGTT...TCTGCTCCTTCTAGATCTTCTCCTTATCAGTAGCCCCCATCTCAGACATGGCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS TCA 90 bp | TCTTTCAATGTCGCTAATGGAAAAGGAGCCAGAGAAGGGCCTGACTaGGTAGGTAAGATGAAGCTTCATGGGTGTATCTGTCCAAATGGA | + |
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Preference number: 5 (lower is better) Translates to: SFNVANGKGAREGPD*VGKMKLHGCICPNG Trigger: TCCATTTGGACAGATACACCCATGAAGCTTCATCTTACCTACTCAGTCAGGCCCTTCTCTGGCTCCTTTTCCATTAGCGACATTGAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | TTTCTATTTAAACCCAAACCTCATGTCAGGACCCAGAGCGTGGACTTTGTGAGATTCAATATCCGGGTATaGGAAGACCAGGGTACAGAC | + |
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Preference number: 5 (lower is better) Translates to: FLFKPKPHVRTQSVDFVRFNIRV*EDQGTD Trigger: GTCTGTACCCTGGTCTTCCAATACCCGGATATTGAA...TCTCACAAAGTCCACGCTCTGGGTCCTGACATGAGGTTTGGGTTTAAATAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | AATGATTGGCTTGTTGAGGACAGGTGGTCAAGCCTAGCTTGCTATGGCTGCCAGTTTATATTGGAAATTTaGGAGGATGCTGTCCACATG | + |
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Preference number: 5 (lower is better) Translates to: NDWLVEDRWSSLACYGCQFILEI*EDAVHM Trigger: CATGTGGACAGCATCCTCCAAAATTTCCAATATAAA...CTGGCAGCCATAGCAAGCTAGGCTTGACCACCTGTCCTCAACAAGCCAATCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | ACACCTTGTTCATGTGCTCCAGAAGAGCTCCACCTAAATATTCTACCACATCTAAGAGAGGCAGAGAGGTaGCCTACAAAAGTGGCATAT | + |
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Preference number: 5 (lower is better) Translates to: TPCSCAPEELHLNILPHLREAER*PTKVAY Trigger: ATATGCCACTTTTGTAGGCAACCTCTCTGCCTCTCT...TAGATGTGGTAGAATATTTAGGTGGAGCTCTTCTGGAGCACATGAACAAGGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS-3UTR CAA 90 bp | GAGCTTACCTCTCAGGAAGAGATTACACACAACTCTGATCATGTGTCAGACAGTAGATGTGAGAAAATGTaGGAGGTGATGTCCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: ELTSQEEITHNSDHVSDSRCEKM*EVMSQF Trigger: AAACTGGGACATCACCTCCAACATTTTCTCACATCT...ACTGTCTGACACATGATCAGAGTTGTGTGTAATCTCTTCCTGAGAGGTAAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS TCA 72 bp | GCATCCAGGGAGTGGCCGGAGAGGTATGGCAGTGTTTaGTGTCTGTTGGGCAGGGATAGTAAGCCGGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: ASREWPERYGSV*CLLGRDSKPAS Trigger: CGAAGCCGGCTTACTATCCCTGCCCAACAGACATCAAACACTGCCATACCTCTCCGGCCACTCCCTGGATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | GACAGAGGGGCTGGGACTGCTAAGGACCGCTGGGTTTaGGTAGACAAGCAGACCCAACAGTTGGAAAACAGG | + |
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Preference number: 6 (lower is better) Translates to: DRGAGTAKDRWV*VDKQTQQLENR Trigger: CCTGTTTTCCAACTGTTGGGTCTGCTTGTCTACCCAAACCCAGCGGTCCTTAGCAGTCCCAGCCCCTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS TCA 72 bp | GAAGAGATACCCAGGCCTGCAAGGAAGGGAAAGAGGTaGGGGGACCTCTTTGGGCGAAGAACTGAGTCTGAG | + |
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Preference number: 6 (lower is better) Translates to: EEIPRPARKGKR*GDLFGRRTESE Trigger: CTCAGACTCAGTTCTTCGCCCAAAGAGGTCCCCTCACCTCTTTCCCTTCCTTGCAGGCCTGGGTATCTCTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS GCA 72 bp | CGTCCAAGGTCAGGCCACTGTCCCCAAGAGTCAGAATaGTGGCCGAGTTCAGATGCTCGTTCTTGGAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RPRSGHCPQESE*WPSSDARSWSF Trigger: GAAACTCCAAGAACGAGCATCTGAACTCGGCCAGCATTCTGACTCTTGGGGACAGTGGCCTGACCTTGGACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | CAAATGGACAGAGGGGCTGGGACTGCTAAGGACCGCTaGGTTTGGGTAGACAAGCAGACCCAACAGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: QMDRGAGTAKDR*VWVDKQTQQLE Trigger: TTCCAACTGTTGGGTCTGCTTGTCTACCCAAACCCAGCGGTCCTTAGCAGTCCCAGCCCCTCTGTCCATTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | GAGTCAGAATGCTGGCCGAGTTCAGATGCTCGTTCTTaGAGTTTCCTTGCCGCGTCCCGGACTATTCCAGAC | + |
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Preference number: 6 (lower is better) Translates to: ESECWPSSDARS*SFLAASRTIPD Trigger: GTCTGGAATAGTCCGGGACGCGGCAAGGAAACTCCAAGAACGAGCATCTGAACTCGGCCAGCATTCTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | AGTGGCCGGAGAGGTATGGCAGTGTTTGATGTCTGTTaGGCAGGGATAGTAAGCCGGCTTCGAGAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: SGRRGMAVFDVC*AGIVSRLREDE Trigger: CTCATCTTCTCGAAGCCGGCTTACTATCCCTGCCCAACAGACATCAAACACTGCCATACCTCTCCGGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | CCAAGGTCAGGCCACTGTCCCCAAGAGTCAGAATGCTaGCCGAGTTCAGATGCTCGTTCTTGGAGTTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PRSGHCPQESEC*PSSDARSWSFL Trigger: AAGGAAACTCCAAGAACGAGCATCTGAACTCGGCCAGCATTCTGACTCTTGGGGACAGTGGCCTGACCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 72 bp | CACGGTCTCAGTAAAGAGTGGTCCCCAGAGAGGGCGTaGGGCAGATTCGAAGAAACGGTCCTTATGGGGATA | + |
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Preference number: 6 (lower is better) Translates to: HGLSKEWSPERA*GRFEETVLMGI Trigger: TATCCCCATAAGGACCGTTTCTTCGAATCTGCCCAACGCCCTCTCTGGGGACCACTCTTTACTGAGACCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 90 bp | CGACCTGAGCACGGTCTCAGTAAAGAGTGGTCCCCAGAGAGGGCGTaGGGCAGATTCGAAGAAACGGTCCTTATGGGGATATATCACAGA | + |
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Preference number: 6 (lower is better) Translates to: RPEHGLSKEWSPERA*GRFEETVLMGIYHR Trigger: TCTGTGATATATCCCCATAAGGACCGTTTCTTCGAATCTGCCCAACGCCCTCTCTGGGGACCACTCTTTACTGAGACCGTGCTCAGGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | ACGGTCTCAGTAAAGAGTGGTCCCCAGAGAGGGCGTTaGGCAGATTCGAAGAAACGGTCCTTATGGGGATAT | + |
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Preference number: 6 (lower is better) Translates to: TVSVKSGPQRGR*ADSKKRSLWGY Trigger: ATATCCCCATAAGGACCGTTTCTTCGAATCTGCCCAACGCCCTCTCTGGGGACCACTCTTTACTGAGACCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 90 bp | AGATACCCAGGCCTGCAAGGAAGGGAAAGAGGTGAGGGGACCTCTTaGGGCGAAGAACTGAGTCTGAGGAAAGAACTGAAGCAAAAAGGG | + |
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Preference number: 6 (lower is better) Translates to: RYPGLQGRERGEGTS*GEELSLRKELKQKG Trigger: CCCTTTTTGCTTCAGTTCTTTCCTCAGACTCAGTTCTTCGCCCAAAGAGGTCCCCTCACCTCTTTCCCTTCCTTGCAGGCCTGGGTATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS TCA 72 bp | GAAAACAGGGAAGAGTTGGTATCACGTAGGATGTGGTaGGTGAGGTTTACAAGGGGCATCCAGCTTTCCGGA | + |
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Preference number: 6 (lower is better) Translates to: ENREELVSRRMW*VRFTRGIQLSG Trigger: TCCGGAAAGCTGGATGCCCCTTGTAAACCTCACTCACCACATCCTACGTGATACCAACTCTTCCCTGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 72 bp | CGTTTGGTTATTGGGGAGAAGTTCAATATCCGGGTATaGGAAGACCAGGGTACAGACACCGGACCAATTGGC | + |
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Preference number: 6 (lower is better) Translates to: RLVIGEKFNIRV*EDQGTDTGPIG Trigger: GCCAATTGGTCCGGTGTCTGTACCCTGGTCTTCCAATACCCGGATATTGAACTTCTCCCCAATAACCAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 72 bp | TTGGAGGATGCTGTCCACATGCCTTTTGGCAGTGTCTaGAACAAAGGAGCCAAGTCTCTGGGACACAAAACG | + |
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Preference number: 6 (lower is better) Translates to: LEDAVHMPFGSV*NKGAKSLGHKT Trigger: CGTTTTGTGTCCCAGAGACTTGGCTCCTTTGTTCAAGACACTGCCAAAAGGCATGTGGACAGCATCCTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 90 bp | TTGAGGCAGAAGGCGTACGAGAAGCTGAGAAGATGTGAGAAAATGTaGGAGGTGATGTCCCAGTTTTCTTGGACAGTGATCTCGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRQKAYEKLRRCEKM*EVMSQFSWTVISFS Trigger: GGAGAACGAGATCACTGTCCAAGAAAACTGGGACATCACCTCCAACATTTTCTCACATCTTCTCAGCTTCTCGTACGCCTTCTGCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS TCA 72 bp | GTGATGATCCGAAATATGCCTGTTGAGCTGACGAGTTaGAGAAAAGCAATCGCCCTTCTGTCAGGATTGTGG | + |
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Preference number: 6 (lower is better) Translates to: VMIRNMPVELTS*RKAIALLSGLW Trigger: CCACAATCCTGACAGAAGGGCGATTGCTTTTCTTCAACTCGTCAGCTCAACAGGCATATTTCGGATCATCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 72 bp | AAGGCGTACGAGAAGCTGAGAAGATGTGAGAAAATGTaGGAGGTGATGTCCCAGTTTTCTTGGACAGTGATC | + |
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Preference number: 6 (lower is better) Translates to: KAYEKLRRCEKM*EVMSQFSWTVI Trigger: GATCACTGTCCAAGAAAACTGGGACATCACCTCCAACATTTTCTCACATCTTCTCAGCTTCTCGTACGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CAA 72 bp | TTCTTCCAAGGTTTCGGAAAGAACCTTAGAAAGCTGTaGGAAATAGAGAGTCGAGGTGGCCAAGCCAGCTAT | + |
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Preference number: 6 (lower is better) Translates to: FFQGFGKNLRKL*EIESRGGQASY Trigger: ATAGCTGGCTTGGCCACCTCGACTCTCTATTTCCAACAGCTTTCTAAGGTTCTTTCCGAAACCTTGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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| CDS CCA 72 bp | TTGAAGTGGGTAGGGTTCACTGACATGGTAACAGGGTaGGTTGAGTTGTCTGGTTCAAATAAAGTGAGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LKWVGFTDMVTG*VELSGSNKVRL Trigger: TAACCTCACTTTATTTGAACCAGACAACTCAACCCACCCTGTTACCATGTCAGTGAACCCTACCCACTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059362.3 |
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