Pregenerated sensors for SYN3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059602Ensembl transcript IDs: ENSMUST00000120638.8, ENSMUST00000121789.2
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACAGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTaGCTTGCTGGCCCTTTTGAGTTGGGTGTACCCATGAGACTGTTC | + |
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Preference number: 1 (lower is better) Translates to: HRSKDSGTVAGWLAC*LAGPFELGVPMRLF Trigger: GAACAGTCTCATGGGTACACCCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | AATCATTTGTCTCACAGAAGCAAGGACAGTGGCACTGTGGCTGGCTaGCTGGCTTGCTGGCTTGCTGGCCCTTTTGAGTTGGGTGTACCC | + |
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Preference number: 1 (lower is better) Translates to: NHLSHRSKDSGTVAG*LACWLAGPFELGVP Trigger: GGGTACACCCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCTGTGAGACAAATGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR GCA 90 bp | ACTGTGTGCAGGTACTGCACTGGCACACAGAGAAGCACCCAGGTTTaGTTGGGTCTACAGACATTTAGACCACTAGGGGCGCAGAGCATA | + |
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Preference number: 1 (lower is better) Translates to: TVCRYCTGTQRSTQV*LGLQTFRPLGAQSI Trigger: TATGCTCTGCGCCCCTAGTGGTCTAAATGTCTGTAGACCCAAGCAAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | CGCTGTTGGCACGGTCTGGGGAGATTCTCCAGGTTGGATTCAGGGTaGGAAAGACTTGTAGAGATGTCCAGTTCAAGGCTCTCTAGGACA | + |
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Preference number: 1 (lower is better) Translates to: RCWHGLGRFSRLDSG*ERLVEMSSSRLSRT Trigger: TGTCCTAGAGAGCCTTGAACTGGACATCTCTACAAGTCTTTCCCACCCTGAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | TACTTCTTAATCATTTGTCTCACAGAAGCAAGGACAGTGGCACTGTaGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCCCTTTTGAGTTGG | + |
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Preference number: 1 (lower is better) Translates to: YFLIICLTEARTVAL*LAGWLAGLLALLSW Trigger: CCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCTGTGAGACAAATGATTAAGAAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR TCA 90 bp | AGTTCCTGCATCTTTAGGAAGCATATTTCCGTTGGGAACCAAGGCTaGGAAGGAGGGAACCAGAGAAAGGCTCCAGTGATCGAGTCTTCT | + |
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Preference number: 1 (lower is better) Translates to: SSCIFRKHISVGNQG*EGGNQRKAPVIESS Trigger: AGAAGACTCGATCACTGGAGCCTTTCTCTGGTTCCCTCCTTCTCAGCCTTGGTTCCCAACGGAAATATGCTTCCTAAAGATGCAGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR TCA 90 bp | TTCTATAGGAGTGGTGTCACCTCCAGTTGCAGCTCAGGGTGCTGTTaGGAAGAGGCAGATCAGAGAGGATCTTGTACATCTTCGGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: FYRSGVTSSCSSGCC*EEADQRGSCTSSEF Trigger: AAACTCCGAAGATGTACAAGATCCTCTCTGATCTGCCTCTTCTCAACAGCACCCTGAGCTGCAACTGGAGGTGACACCACTCCTATAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR TCA 90 bp | CAAGTAACTCTGAGAACTCTGGGAAAATATAGCAATGGATTCTACTaGGCCACTATCAGCCAGCTCAGGTACACCCCAGGGACCTTAGGG | + |
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Preference number: 1 (lower is better) Translates to: QVTLRTLGKYSNGFY*ATISQLRYTPGTLG Trigger: CCCTAAGGTCCCTGGGGTGTACCTGAGCTGGCTGATAGTGGCTCAGTAGAATCCATTGCTATATTTTCCCAGAGTTCTCAGAGTTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR TCA 90 bp | GAGCATAAGAGGTGCCCAGATGGACAGCTGAAAGGGAATGTTCTCTaGAGGGAGTCAGAGAACATTCCAAAGCTGGTGGTCCTAATTGAT | + |
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Preference number: 1 (lower is better) Translates to: EHKRCPDGQLKGNVL*RESENIPKLVVLID Trigger: ATCAATTAGGACCACCAGCTTTGGAATGTTCTCTGACTCCCTTCAGAGAACATTCCCTTTCAGCTGTCCATCTGGGCACCTCTTATGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR TCA 90 bp | AGAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTaGCCACCACTCAGGCACACAGGTATACACACGCAATCAATTTTT | + |
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Preference number: 1 (lower is better) Translates to: RTHVLERETQLSPVL*PPLRHTGIHTQSIF Trigger: AAAAATTGATTGCGTGTGTATACCTGTGTGCCTGAGTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | ACAGTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTaGCTTTTGACAGTGGACACAGCTTCCATCAGAAAGAAAATTCAA | + |
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Preference number: 1 (lower is better) Translates to: TVGVVSSAIITIQRD*LLTVDTASIRKKIQ Trigger: TTGAATTTTCTTTCTGATGGAAGCTGTGTCCACTGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | GTTGAGAAGAGAAAATTTCAAGGTGTTTTCCCTAGAAGTTCCTCTTaGGATGTCCTCAATCCATGTTCTAATTTCACACCCACCAACTCA | + |
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Preference number: 1 (lower is better) Translates to: VEKRKFQGVFPRSSS*DVLNPCSNFTPTNS Trigger: TGAGTTGGTGGGTGTGAAATTAGAACATGGATTGAGGACATCCCAAGAGGAACTTCTAGGGAAAACACCTTGAAATTTTCTCTTCTCAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR GCA 90 bp | GTGAGGAGGTATAGGACTCTTCCACTATCAGAATATAATAAGGTATaGCATGAACATGTGTTGCCTGCCTACTTCTTAATCATTTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: VRRYRTLPLSEYNKV*HEHVLPAYFLIICL Trigger: GAGACAAATGATTAAGAAGTAGGCAGGCAACACATGTTCATGGCATACCTTATTATATTCTGATAGTGGAAGAGTCCTATACCTCCTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | CAGACATTTGACTCAGGATTCTATTCCTTTTTAACTTTAAGATGGTaGGGAAATTATGTGCACTCAGTTGGAACCAACCTCCAGATCTCT | + |
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Preference number: 1 (lower is better) Translates to: QTFDSGFYSFLTLRW*GNYVHSVGTNLQIS Trigger: AGAGATCTGGAGGTTGGTTCCAACTGAGTGCACATAATTTCCCCACCATCTTAAAGTTAAAAAGGAATAGAATCCTGAGTCAAATGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 90 bp | ACACAGACATTTGACTCAGGATTCTATTCCTTTTTAACTTTAAGATaGTGGGGAAATTATGTGCACTCAGTTGGAACCAACCTCCAGATC | + |
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Preference number: 1 (lower is better) Translates to: TQTFDSGFYSFLTLR*WGNYVHSVGTNLQI Trigger: GATCTGGAGGTTGGTTCCAACTGAGTGCACATAATTTCCCCACCATCTTAAAGTTAAAAAGGAATAGAATCCTGAGTCAAATGTCTGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCAGCTCAGGGTGCTGTTaGGAAGAGGCAGATCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RSKDSGTVAGWLACWLAGSSGCC*EEADQR Trigger: TCTCTGATCTGCCTCTTCTCAACAGCACCCTGAGCT...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCGCTGGTGGTCCTAATTaGTTCCTGGCAGATGGGAGT | + |
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Preference number: 2 (lower is better) Translates to: RSKDSGTVAGWLACWLAGAGGPN*FLADGS Trigger: ACTCCCATCTGCCAGGAATCAATTAGGACCACCAGC...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | ATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACTCAGGCCCGCAGGGCCAGTTATaGCGCTGTTGGCACGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: MCWKERPNSHQSSDHHSGPQGQL*RCWHGL Trigger: CAGACCGTGCCAACAGCGCCATAACTGGCCCTGCGG...GCCTGAGTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACGGCACTGTGGCTGGCTaGCTGGCTTGCTGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: EPMCWKERPNSHQSSDHHGTVAG*LACWLA Trigger: AGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCC...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAAACAAGCCACACAGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGGTTGGGAACCAAGGCTaGGAAGGAGGGAACCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: CKNKPHRHLTWYRRQGSRVGNQG*EGGNQR Trigger: TCTCTGGTTCCCTCCTTCTCAGCCTTGGTTCCCAAC...CCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCTGTGTGGCTTGTTTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR GCA 90 bp | CCCGTGTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGTCTTCTTGCCTGCCTaGCTGTCTTCCAGCCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: PVLRNLGAPKATIQSDSIVFLPA*LSSSLD Trigger: ATCCAGGCTGGAAGACAGGCAGGCAGGCAAGAAGAC...AATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAACACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR GCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGTCGAGTCTTCTTGCCTaGCTGCCTGTCTTCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVSSLLA*LPVFQP Trigger: AGGCTGGAAGACAGGCAGGCAGGCAAGAAGACTCGA...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR CAA 90 bp | GGCCAGTTATGGCGCTGTTGGCACGGTCTGGGGAGATTCTCCAGGTaGGATTCAGGGTGGGAAAGACTTGTAGAGATGTCCAGTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: GQLWRCWHGLGRFSR*DSGWERLVEMSSSR Trigger: CCTTGAACTGGACATCTCTACAAGTCTTTCCCACCCTGAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCGCCATAACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAAACAAGCCACACAGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCAGTGATCGAGTCTTCTTaGCTGCCTGCCTGTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QKQATQTSHLVPATGEQAVIESS*LPACLP Trigger: TGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCAC...TGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCTGTGTGGCTTGTTTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR GCA 90 bp | GTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTGACAACTGTGTGCAGGTACTaGACTGGCACACAGAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: VGVVSSAIITIQRDWLLTTVCRY*TGTQRS Trigger: GCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGT...TGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGGAAGCATATTTCCGTTaGGAACCAAGGCTGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVEAYFR*EPRLRR Trigger: CCTTCTCAGCCTTGGTTCCCAACGGAAATATGCTTC...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR TCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACCTCAAAGTGTTCTGGTaGGGAGGTATAGGACTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EPMCWKERPNSHQSSDHHLKVFW*GGIGLF Trigger: GAAGAGTCCTATACCTCCTCACCAGAACACTTTGAG...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTGACAGTCCTAATTGATTCCTaGCAGATGGGAGTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VGVVSSAIITIQRDWLLTVLIDS*QMGVEE Trigger: CTCCTCCACTCCCATCTGCCAGGAATCAATTAGGAC...TGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CAA 90 bp | GGCTGTAGATCATCAGTTCCTGCATCTTTAGGAAGCATATTTCCGTaGGGAACCAAGGCTGAGAAGGAGGGAACCAGAGAAAGGCTCCAG | + |
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Preference number: 2 (lower is better) Translates to: GCRSSVPASLGSIFP*GTKAEKEGTRERLQ Trigger: CTGGAGCCTTTCTCTGGTTCCCTCCTTCTCAGCCTTGGTTCCCAACGGAAATATGCTTCCTAAAGATGCAGGAACTGATGATCTACAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR TCA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCGCCCAGATGGACAGCTaGAAGGGAATGTTCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VAMPVISVLGKQRHADLFAQMDS*KGMFSE Trigger: TTCAGAGAACATTCCCTTTCAGCTGTCCATCTGGGC...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCGCAGAGCATAAGAGGTaGCCAGATGGACAGCTGAAA | + |
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Preference number: 2 (lower is better) Translates to: VAMPVISVLGKQRHADLFAEHKR*PDGQLK Trigger: TTTCAGCTGTCCATCTGGGCACCTCTTATGCTCTGC...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTGACACCAGAACCCATGTGTTaGAAAGAGAGACCCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VGVVSSAIITIQRDWLLTPEPMC*KERPNS Trigger: AGAGTTGGGTCTCTCTTTCCAACACATGGGTTCTGG...TGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCGCACCCAGGTTTGCTTaGGTCTACAGACATTTAGAC | + |
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Preference number: 2 (lower is better) Translates to: VAMPVISVLGKQRHADLFAPRFA*VYRHLD Trigger: GTCTAAATGTCTGTAGACCCAAGCAAACCTGGGTGC...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTTGACATCCAGAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCAGGTTGGATTCAGGGTaGGAAAGACTTGTAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: SLTSRTHVLERETQLSPVRLDSG*ERLVEM Trigger: CATCTCTACAAGTCTTTCCCACCCTGAATCCAACCT...GACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTCTGGATGTCAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CAA 90 bp | ACTTACAGAGTAAACGTGCTTGACACAAAGCCTGACAACCTGAGTTaGACATCCAGAACCCATGTGTTGGAAAGAGAGACCCAACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: TYRVNVLDTKPDNLS*TSRTHVLERETQLS Trigger: TGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTCTGGATGTCAAACTCAGGTTGTCAGGCTTTGTGTCAAGCACGTTTACTCTGTAAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTGACATCCAGAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCAAAGGGAATGTTCTCTaGAGGGAGTCAGAGAACATT | + |
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Preference number: 2 (lower is better) Translates to: SLTSRTHVLERETQLSPVKGNVL*RESENI Trigger: AATGTTCTCTGACTCCCTTCAGAGAACATTCCCTTT...GACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTCTGGATGTCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTTCAGTCAGACAGCATTaGAATGTCATGGTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PTIMYAFDEGESRPRRGPSVRQH*NVMVKE Trigger: CTCCTTGACCATGACATTCCAATGCTGTCTGACTGA...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR CAA 90 bp | ACTCTTCCACTATCAGAATATAATAAGGTATGCCATGAACATGTGTaGCCTGCCTACTTCTTAATCATTTGTCTCACAGAAGCAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: TLPLSEYNKVCHEHV*PAYFLIICLTEART Trigger: TGTCCTTGCTTCTGTGAGACAAATGATTAAGAAGTAGGCAGGCAACACATGTTCATGGCATACCTTATTATATTCTGATAGTGGAAGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCTGGTGTCACCTCCAGTaGCAGCTCAGGGTGCTGTTG | + |
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Preference number: 3 (lower is better) Translates to: RSKDSGTVAGWLACWLAGWCHLQ*QLRVLL Trigger: CAACAGCACCCTGAGCTGCAACTGGAGGTGACACCA...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 72 bp | GCAAGAGAAGAGCCGGACAGAGAAGGAGAAAAGGACTaGGGCCGCAGGGCCAGTTATGGCGCTGTTGGCACG | + |
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Preference number: 3 (lower is better) Translates to: AREEPDREGEKD*GRRASYGAVGT Trigger: CGTGCCAACAGCGCCATAACTGGCCCTGCGGCCCCAGTCCTTTTCTCCTTCTCTGTCCGGCTCTTCTCTTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCCAGCTCAGGGTGCTGTaGAGAAGAGGCAGATCAGAG | + |
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Preference number: 3 (lower is better) Translates to: RSKDSGTVAGWLACWLAGQLRVL*RRGRSE Trigger: CTCTGATCTGCCTCTTCTCAACAGCACCCTGAGCTG...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 72 bp | AAAGGACTGGGGCCGCAGGGCCAGTTATGGCGCTGTTaGCACGGTCTGGGGAGATTCTCCAGGTTGGATTCA | + |
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Preference number: 3 (lower is better) Translates to: KGLGPQGQLWRC*HGLGRFSRLDS Trigger: TGAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCGCCATAACTGGCCCTGCGGCCCCAGTCCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR CCA 72 bp | AAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTaGCTTGCTGGCCCTTTTGAGTTGGGTGTACCCATG | + |
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Preference number: 3 (lower is better) Translates to: KDSGTVAGWLAC*LAGPFELGVPM Trigger: CATGGGTACACCCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR-3UTR CAA 90 bp | CTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTAGTGATCGAGTCTTCTaGCCTGCCTGCCTGTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTWYRRQGSRHMVDVVMPSDRVF*PACLSS Trigger: GGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACT...AGGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR CCA 72 bp | ATCATTTGTCTCACAGAAGCAAGGACAGTGGCACTGTaGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: IICLTEARTVAL*LAGWLAGLLAL Trigger: AAGGGCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCTGTGAGACAAATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
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| 3UTR TCA 72 bp | AAGGCTGAGAAGGAGGGAACCAGAGAAAGGCTCCAGTaGTCGAGTCTTCTTGCCTGCCTGCCTGTCTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: KAEKEGTRERLQ*SSLLACLPVFQ Trigger: CTGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACTGGAGCCTTTCTCTGGTTCCCTCCTTCTCAGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| 3UTR-3UTR CAA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCGGCTGGCTTGCTGGCTaGCTGGCCCTTTTGAGTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VAMPVISVLGKQRHADLFGWLAG*LALLSW Trigger: CCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCC...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | AAACAGAGACATGCAGATCTCTTCTCTGCAGCTCACTaGCTGGTCAGCCTACTCGAATCAGGGAGCTCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KQRHADLFSAAH*LVSLLESGSSR Trigger: CCTGGAGCTCCCTGATTCGAGTAGGCTGACCAGCCAGTGAGCTGCAGAGAAGAGATCTGCATGTCTCTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR TCA 72 bp | GTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTaGCCACCACTCAGGCACACAGGTATACACACGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VLERETQLSPVL*PPLRHTGIHTQ Trigger: TTGCGTGTGTATACCTGTGTGCCTGAGTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR GCA 72 bp | AGTGCTGGGAAAACAGAGACATGCAGATCTCTTCTCTaGAGCTCACTGGCTGGTCAGCCTACTCGAATCAGG | + |
|
Preference number: 3 (lower is better) Translates to: SAGKTETCRSLL*SSLAGQPTRIR Trigger: CCTGATTCGAGTAGGCTGACCAGCCAGTGAGCTGCAGAGAAGAGATCTGCATGTCTCTGTTTTCCCAGCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR TCA 72 bp | AGTGGTGTCACCTCCAGTTGCAGCTCAGGGTGCTGTTaGGAAGAGGCAGATCAGAGAGGATCTTGTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SGVTSSCSSGCC*EEADQRGSCTS Trigger: AGATGTACAAGATCCTCTCTGATCTGCCTCTTCTCAACAGCACCCTGAGCTGCAACTGGAGGTGACACCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR GCA 72 bp | AATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATaGAGATCTCTTCTCTGCAGCTCACTGGCTGGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: NARNLSAGKTET*RSLLCSSLAGQ Trigger: CTGACCAGCCAGTGAGCTGCAGAGAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | GTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTaGCTTTTGACAGTGGACACAGCTTCCATCAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VVSSAIITIQRD*LLTVDTASIRK Trigger: CTTTCTGATGGAAGCTGTGTCCACTGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCGAGAAGCACCCAGGTTaGCTTGGGTCTACAGACATT | + |
|
Preference number: 3 (lower is better) Translates to: VAMPVISVLGKQRHADLFEKHPG*LGSTDI Trigger: AATGTCTGTAGACCCAAGCAAACCTGGGTGCTTCTC...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | GAGCCACAGAATATGAATAGATCTGTGAGACGACGATaGGCAGCAAGAGAAGAGCCGGACAGAGAAGGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: EPQNMNRSVRRR*AAREEPDREGE Trigger: TTCTCCTTCTCTGTCCGGCTCTTCTCTTGCTGCCCATCGTCGTCTCACAGATCTATTCATATTCTGTGGCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACTCGGAGTTTAAGACTTaGTTCAGAGAGCCACAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: EPMCWKERPNSHQSSDHHSEFKT*FREPQN Trigger: ATTCTGTGGCTCTCTGAACAAAGTCTTAAACTCCGA...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR TCA 72 bp | ATCTTTAGGAAGCATATTTCCGTTGGGAACCAAGGCTaGGAAGGAGGGAACCAGAGAAAGGCTCCAGTGATC | + |
|
Preference number: 3 (lower is better) Translates to: IFRKHISVGNQG*EGGNQRKAPVI Trigger: GATCACTGGAGCCTTTCTCTGGTTCCCTCCTTCTCAGCCTTGGTTCCCAACGGAAATATGCTTCCTAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR TCA 72 bp | GCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTaGCAGTGGACACAGCTTCCATCAGAAAGAAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: AQPSSPSSETGF*QWTQLPSERKF Trigger: GAATTTTCTTTCTGATGGAAGCTGTGTCCACTGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | TATTTTCTAAGTGTCTACTGTGTGCAGGTACTGCACTaGCACACAGAGAAGCACCCAGGTTTGCTTGGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: YFLSVYCVQVLH*HTEKHPGLLGS Trigger: AGACCCAAGCAAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGTAGACACTTAGAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | GCTACTGACACTCACTATAAACCTTTCCTGATATTCTaGACAGTGGCAATGAGCACAAACCCCAGCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: ATDTHYKPFLIF*TVAMSTNPSRS Trigger: GGACCTGCTGGGGTTTGTGCTCATTGCCACTGTCCAGAATATCAGGAAAGGTTTATAGTGAGTGTCAGTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACCTACTTCTTAATCATTaGTCTCACAGAAGCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EPMCWKERPNSHQSSDHHLLLNH*SHRSKD Trigger: GTCCTTGCTTCTGTGAGACAAATGATTAAGAAGTAG...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR TCA 72 bp | TGTACCCATGAGACTGTTCACCTCTGGGAATCTCTCTaGGAACTCAAGTTCAATGAGTTAGGTCCTAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: CTHETVHLWESL*ELKFNELGPRA Trigger: GGCTCTAGGACCTAACTCATTGAACTTGAGTTCTCAGAGAGATTCCCAGAGGTGAACAGTCTCATGGGTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | CCCAGTTTCCTTGATTATAAGGCAGACATACAGTGGTaGGGAGATGCTTGTTGCTGTGCAAGCTTAAGTACC | + |
|
Preference number: 3 (lower is better) Translates to: PSFLDYKADIQW*GDACCCASLST Trigger: GGTACTTAAGCTTGCACAGCAACAAGCATCTCCCCACCACTGTATGTCTGCCTTATAATCAAGGAAACTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | AGCCCCAGTTTCCTTGATTATAAGGCAGACATACAGTaGTGGGGAGATGCTTGTTGCTGTGCAAGCTTAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SPSFLDYKADIQ*WGDACCCASLS Trigger: ACTTAAGCTTGCACAGCAACAAGCATCTCCCCACCACTGTATGTCTGCCTTATAATCAAGGAAACTGGGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR TCA 72 bp | AACCAACCTCCAGATCTCTCACTTTTCATCATTTCCTaGGCTACTGACACTCACTATAAACCTTTCCTGATA | + |
|
Preference number: 3 (lower is better) Translates to: NQPPDLSLFIIS*ATDTHYKPFLI Trigger: TATCAGGAAAGGTTTATAGTGAGTGTCAGTAGCTCAGGAAATGATGAAAAGTGAGAGATCTGGAGGTTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | AGAAAATTTCAAGGTGTTTTCCCTAGAAGTTCCTCTTaGGATGTCCTCAATCCATGTTCTAATTTCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: RKFQGVFPRSSS*DVLNPCSNFTP Trigger: GGGTGTGAAATTAGAACATGGATTGAGGACATCCCAAGAGGAACTTCTAGGGAAAACACCTTGAAATTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CCA 72 bp | AACTTTAAGATGGTGGGGAAATTATGTGCACTCAGTTaGAACCAACCTCCAGATCTCTCACTTTTCATCATT | + |
|
Preference number: 3 (lower is better) Translates to: NFKMVGKLCALS*NQPPDLSLFII Trigger: AATGATGAAAAGTGAGAGATCTGGAGGTTGGTTCCAACTGAGTGCACATAATTTCCCCACCATCTTAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR GCA 72 bp | TATAGGACTCTTCCACTATCAGAATATAATAAGGTATaGCATGAACATGTGTTGCCTGCCTACTTCTTAATC | + |
|
Preference number: 3 (lower is better) Translates to: YRTLPLSEYNKV*HEHVLPAYFLI Trigger: GATTAAGAAGTAGGCAGGCAACACATGTTCATGGCATACCTTATTATATTCTGATAGTGGAAGAGTCCTATA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | TCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCGCCCCCTTGTGGAGGTaGCCTTGGCTGGGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVPATGEQAYGGCSDAAPLWR*PWLGLS Trigger: GGACAGCCCCAGCCAAGGCCACCTCCACAAGGGGGC...GGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | TCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCCTGCTGTGGAGAGCCTaGCTGGGGACTCACAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHLVPATGEQAYGGCSDALLWRA*LGTHRL Trigger: CAGCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCAG...GGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGTTATGGCGCTGTTGGCACGGTCTGGGGAGATTCTCCAGGTTGGATTCCTCTGTGGCCGGGGATaGTGGAGAGCTACTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPVMALLARSGEILQVGFLCGRG*WRATGA Trigger: AGCTCCAGTAGCTCTCCAGCATCCCCGGCCACAGAG...GAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCGCCATAACTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCAGTTATGGCGCTGTTGGCACGGTCTGGGGAGATTCTCCAGGTTGGATTCCCTCAGCCAGGGCCATaGTGTAGGCATGCTGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPVMALLARSGEILQVGFPQPGP*CRHAVG Trigger: TCCGACAGCATGCCTACAGCATGGCCCTGGCTGAGG...GAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCGCCATAACTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCGACCCCGGTGACCTTTaGTGCTGTGGAGAGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SHLVPATGEQAYGGCSDADPGDL*CCGEPD Trigger: GTCAGGCTCTCCACAGCAGCAAAGGTCACCGGGGTC...GGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | TTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGCCTGCTGGGAGGTGCTaGGTCCCTGCACTGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRNLGAPKATIQSDSIGMPAGRC*VPALEA Trigger: GGCCTCCAGTGCAGGGACGCAGCACCTCCCAGCAGG...CATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCAGGCTGCTGGCCTTGTaGCGAGAGTCGCTGTTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SHLVPATGEQAYGGCSDARLLAL*RESLLG Trigger: TCCCAACAGCGACTCTCGCCACAAGGCCAGCAGCCT...GGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTCTGCCGTCCTTGCTGTaGACAGCCTTGACAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTWYRRQGSRHMVDVVMPLPSLL*TALTAQ Trigger: CTGTGCTGTCAAGGCTGTCCACAGCAAGGACGGCAG...AGGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACCACCGGAGAAGGAGCTaGACAGGCTGGATCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EPMCWKERPNSHQSSDHHHRRRS*TGWILE Trigger: CTCCAGGATCCAGCCTGTTCAGCTCCTTCTCCGGTG...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | TGCAAAAACAAGCCACACAGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGGGGACTGAGATTTGTTaGGGTGGGGGTGGGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CKNKPHRHLTWYRRQGSRGTEIC*GGGGVM Trigger: CATCACCCCACCCCCACCTCAACAAATCTCAGTCCC...CCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCTGTGTGGCTTGTTTTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCCCATTTCTCACAACTTaGATGTCCACCATGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSKDSGTVAGWLACWLAGPFLTT*MSTMQP Trigger: AGGCTGCATGGTGGACATGCAAGTTGTGAGAAATGG...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCAAGGACAGTGGCACTGTGGCTGGCTGGCTGGCTTGCTGGCTTGCTGGCACACCCAAGGCTTGCTaGAGAAGTTGTATACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSKDSGTVAGWLACWLAGTPKAC*RSCIRS Trigger: ACTCCGTATACAACTTCTGCAGCAAGCCTTGGGTGT...GCCAGCAAGCCAGCAAGCCAGCCAGCCAGCCACAGTGCCACTGTCCTTGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | AACCAGAGAAAGGCTCCAGTGATCGAGTCTTCTTGCCTGCCTGCCTGTCTTCCACCCGGTGACCTTTGCTaGTGTGGAGAGCCTGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQRKAPVIESSCLPACLPPGDLC*CGEPDW Trigger: CCAGTCAGGCTCTCCACAGCAGCAAAGGTCACCGGG...TGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACTGGAGCCTTTCTCTGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGCTTGGCTTGGAGGCCTaGTTTGGAGAACTGCCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVLGLEA*FGELPP Trigger: CGGTGGCAGTTCTCCAAACCAGGCCTCCAAGCCAAG...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | CCCGTGTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGCTGGCACTTGGCTTaGAGGCCTGGTTTGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRNLGAPKATIQSDSIGWHLA*RPGLEN Trigger: GTTCTCCAAACCAGGCCTCCAAGCCAAGTGCCAGCC...AATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAACACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | GGCTGGCTGGCTTGCTGGCTTGCTGGCCCTTTTGAGTaGGGTGTACCCATGAGACTGTTCACCTCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GWLACWLAGPFE*GVPMRLFTSGN Trigger: ATTCCCAGAGGTGAACAGTCTCATGGGTACACCCAACTCAAAAGGGCCAGCAAGCCAGCAAGCCAGCCAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGCGGAGTAGAGAGAGTTaGCAGCAGGAAGCCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVRSRES*QQEALH Trigger: ATGGAGGGCTTCCTGCTGTCAACTCTCTCTACTCCG...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATCTCTGTGGCCGGGGATaGTGGAGAGCTACTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VEEPRGSQGYHSVRQHWNLCGRG*WRATGA Trigger: AGCTCCAGTAGCTCTCCAGCATCCCCGGCCACAGAG...ATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | TGCAAAAACAAGCCACACAGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGTCTGTCATGGCCACCTaGTCCAGCATAGCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CKNKPHRHLTWYRRQGSRSVMAT*SSIAEP Trigger: AGGCTCTGCTATGCTGGAGCAGGTGGCCATGACAGA...CCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCTGTGTGGCTTGTTTTTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGCACCCTGCTGGGAGGTaGTGCGTCCCTGCACTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRRGPLPKGKQNTNKHPAGR*CVPALE Trigger: CTCCAGTGCAGGGACGCAGCACCTCCCAGCAGGGTG...CTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAGGGCACCGTGGCCCCTaGCACCAGGAGTTGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPRRGPLPKGKQNTNKTAGHRGP*HQELAH Trigger: ATGAGCCAACTCCTGGTGCCAGGGGCCACGGTGCCC...TGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | TTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGGGAGGTGGCCTTGGCTaGGGCTGTCCTAGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNLGAPKATIQSDSIGMGGGLG*GCPSRG Trigger: ACCTCTACTAGGACAGCCCCAGCCAAGGCCACCTCC...CATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | GATGTAGTGATGCCTTGTCTGTCTAGAGGGCCCGTGTaGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DVVMPCLSRGPV*RNLGAPKATIQ Trigger: CTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAACACGGGCCCTCTAGACAGACAAGGCATCACTACATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | TGGCGCTGTTGGCACGGTCTGGGGAGATTCTCCAGGTaGGATTCAGGGTGGGAAAGACTTGTAGAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WRCWHGLGRFSR*DSGWERLVEMS Trigger: GGACATCTCTACAAGTCTTTCCCACCCTGAATCCAACCTGGAGAATCTCCCCAGACCGTGCCAACAGCGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | CTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTTCGATGGGAGGTATCTaGTGTGCTGAGGCTGTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTWYRRQGSRHMVDVVMPSMGGI*CAEAVS Trigger: ACTAACAGCCTCAGCACATCAGATACCTCCCATCGA...AGGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGTCATGGTCACCTGGTTTGGAGAACTaGCACCGGATGCCCGGGATA | + |
|
Preference number: 4 (lower is better) Translates to: LGAPKATIQSDSIGMSWSPGLEN*HRMPGI Trigger: TATCCCGGGCATCCGGTGGCAGTTCTCCAAACCAGG...TGACCATGACATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | TACTGCACTGGCACACAGAGAAGCACCCAGGTTTGCTaGGGTCTACAGACATTTAGACCACTAGGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YCTGTQRSTQVC*GLQTFRPLGAQ Trigger: CTGCGCCCCTAGTGGTCTAAATGTCTGTAGACCCAAGCAAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTGACATCCAGAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCATACTGGAGGCCGATaGCCAGGCTCCGGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSRTHVLERETQLSPVHTGGR*PGSGSP Trigger: AGGACTACCGGAGCCTGGTCATCGGCCTCCAGTATG...GACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTCTGGATGTCAAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAGGGCATGTCCCAGCTTaGTCACCACGGGGAAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: GLEEGLCPKASKILIRLQGHVPA*SPRGSS Trigger: CGAACTTCCCCGTGGTGATCAAGCTGGGACATGCCC...TTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAACCTCAGCCAGGGCCATaGTGTAGGCATGCTGTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLEEGLCPKASKILIRLQPQPGP*CRHAVG Trigger: TCCGACAGCATGCCTACAGCATGGCCCTGGCTGAGG...TTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | ATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTCTGCCCGGAAGCCCTCCATACTaGAGGCCGATGACCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: IMYAFDEGESRPRRGPLPGSPPY*RPMTRL Trigger: GAGCCTGGTCATCGGCCTCCAGTATGGAGGGCTTCC...GGGCAGAGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AACCAGAGAAAGGCTCCAGTGATCGAGTCTTCTTGCCTGCCTGCCTGTCTTCCACGGGGCTGTGAGCATTaGCTTGTGGTTGGGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQRKAPVIESSCLPACLPRGCEH*LVVGEK Trigger: TTTTTCCCCAACCACAAGCCAATGCTCACAGCCCCG...TGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACTGGAGCCTTTCTCTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGTGTGGAGAGCCTGACTaGGGACTCACAGGCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRRGPLPKGKQNTNKCGEPD*GLTGCW Trigger: CCAGCAGCCTGTGAGTCCCCAGTCAGGCTCTCCACA...CTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | GAGTGGTGTCACCTCCAGTTGCAGCTCAGGGTGCTGTaGAGAAGAGGCAGATCAGAGAGGATCTTGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: EWCHLQLQLRVL*RRGRSERILYI Trigger: GATGTACAAGATCCTCTCTGATCTGCCTCTTCTCAACAGCACCCTGAGCTGCAACTGGAGGTGACACCACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CAA 72 bp | CAGCAGGTCCCCTTCAAAACAGTGAGCCAGAGACACTaGCAGCATGTCTGTGGCTTGGCTCCAATGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QQVPFKTVSQRH*QHVCGLAPMFS Trigger: GCTAAACATTGGAGCCAAGCCACAGACATGCTGCAAGTGTCTCTGGCTCACTGTTTTGAAGGGGACCTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCAAGATCCTGGGTCTCTaGACCACGGGTGTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VAMPVISVLGKQRHADLFKILGL*TTGVTG Trigger: TCCTGTCACACCCGTGGTTCAGAGACCCAGGATCTT...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTCATACTGGAGGCCGATaGCCAGGCTCCGGTAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTIMYAFDEGESRPRRGPHTGGR*PGSGSP Trigger: AGGACTACCGGAGCCTGGTCATCGGCCTCCAGTATG...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTTGTCTGTCTAGAGGGCCCAAAACACCCAAGGCTTaGTGCAGAAGTTGTATACGG | + |
|
Preference number: 4 (lower is better) Translates to: QGSRHMVDVVMPCLSRGPKTPKA*CRSCIR Trigger: CCGTATACAACTTCTGCAGCAAGCCTTGGGTGTTTT...GGGCCCTCTAGACAGACAAGGCATCACTACATCCACCATATGCCTGCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | CCCGTGTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTTTGCCCTGGAGATTTTaGAGGTTTAGTCTGTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRNLGAPKATIQSDSILPWRF*RFSLWT Trigger: GGTCCACAGACTAAACCTGCAAAATCTCCAGGGCAA...AATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAACACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTTGTCTGTCTAGAGGGCCCTCCAGTTTCCAGAGATaGAGGTTCTCATGTATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QGSRHMVDVVMPCLSRGPSSFQR*RFSCMP Trigger: AGGCATACATGAGAACCTCCATCTCTGGAAACTGGA...GGGCCCTCTAGACAGACAAGGCATCACTACATCCACCATATGCCTGCTCCCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCACTTGGAGGCCTGGTTTaGAGAACTGCCACCGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: RPRRGPLPKGKQNTNKTALGGLV*RTATGC Trigger: GCATCCGGTGGCAGTTCTCCAAACCAGGCCTCCAAG...TGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAACACCGGAGAAGGAGCTaGACAGGCTGGATCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PRRGPLPKGKQNTNKTAKHRRRS*TGWILE Trigger: CTCCAGGATCCAGCCTGTTCAGCTCCTTCTCCGGTG...TTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTTGTCTGTCTAGAGGGCCCAAGATCTTAATGAGCTaGGAAAACACCCAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSRHMVDVVMPCLSRGPKILMS*ENTQGL Trigger: CAAGCCTTGGGTGTTTTCTCAGCTCATTAAGATCTT...GGGCCCTCTAGACAGACAAGGCATCACTACATCCACCATATGCCTGCTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGGCTGGTTTTCTACTTTaGTCTTTCCCATGCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVAGFLL*SFPCQH Trigger: ATGCTGGCATGGGAAAGATCAAAGTAGAAAACCAGC...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGATGCCTACCGCACAATTTTGGTaGCATTTCTCACAACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWYRRQGSRHMVDVVMPTAQFW*HFSQLA Trigger: TGCAAGTTGTGAGAAATGGCACCAAAATTGTGCGGT...AGGCATCACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | AACCAGAGAAAGGCTCCAGTGATCGAGTCTTCTTGCCTGCCTGCCTGTCTTCCAACACCCAAGGCTTGCTaGAGAAGTTGTATACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NQRKAPVIESSCLPACLPTPKAC*RSCIRS Trigger: ACTCCGTATACAACTTCTGCAGCAAGCCTTGGGTGT...TGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACTGGAGCCTTTCTCTGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | TGCAAAAACAAGCCACACAGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGGTGAGCATTGGCTTGTaGTTGGGGAAAAATGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CKNKPHRHLTWYRRQGSRVSIGL*LGKNVC Trigger: GCAAACATTTTTCCCCAACCACAAGCCAATGCTCAC...CCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCTGTGTGGCTTGTTTTTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGCTTGGGGTCCCTCGATaGGAGGTATCTGATGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRRGPLPKGKQNTNKLGVPR*EVSDVL Trigger: CAGCACATCAGATACCTCCCATCGAGGGACCCCAAG...CTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | TTGTTCAGAGAGCCACAGAATATGAATAGATCTGTGAGACGACGATGGGCAGCACGGAGTAGAGAGAGTTaGCAGCAGGAAGCCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFREPQNMNRSVRRRWAARSRES*QQEALH Trigger: ATGGAGGGCTTCCTGCTGTCAACTCTCTCTACTCCG...TGCTGCCCATCGTCGTCTCACAGATCTATTCATATTCTGTGGCTCTCTGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGTCATGGTCAAGGTCAGCCATTAGCTaGTTGTCTTCTTCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGAPKATIQSDSIGMSWSRSAIS*LSSSTC Trigger: ACACGTGGAAGAAGACAAGCAGCTAATGGCTGACCT...TGACCATGACATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | ATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACTCAGGCGCATTGGCTTGTGGTTaGGGAAAAATGTTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: MCWKERPNSHQSSDHHSGALACG*GKMFAP Trigger: TGGAGCAAACATTTTTCCCCAACCACAAGCCAATGC...GCCTGAGTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAGGATTGTCTCAGCCTTaGCCTCATCTTCACTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPRRGPLPKGKQNTNKTAGLSQP*PHLHLG Trigger: CCCCAAGTGAAGATGAGGCCAAGGCTGAGACAATCC...TGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAAAAGATCCTGGGTCTCTaGACCACGGGTGTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRRGPLPKGKQNTNKTAKKILGL*TTGVTG Trigger: TCCTGTCACACCCGTGGTTCAGAGACCCAGGATCTT...TTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGG 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACAAGATCTTAATGAGCTaGGAAAACACCCAAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: EPMCWKERPNSHQSSDHHKILMS*ENTQGL Trigger: CAAGCCTTGGGTGTTTTCTCAGCTCATTAAGATCTT...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGGGTGATGCTGATTTTTaGGGCTCTTCACCCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GPTIMYAFDEGESRPRRGGDADF*GSSPCW Trigger: CCAGCAGGGTGAAGAGCCTCAAAAATCAGCATCACC...CCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGGACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTCTGTTAGTCAGGGACTaGGATTTGTTGAGGTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTIMYAFDEGESRPRRGPLLVRD*DLLRWG Trigger: CCCCCACCTCAACAAATCTCAGTCCCTGACTAACAG...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGTCATGGTCATTTGACCAGTCTGTATaGGCGTCATCGATAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LGAPKATIQSDSIGMSWSFDQSV*ASSITN Trigger: GTTGGTTATCGATGACGCCCATACAGACTGGTCAAA...TGACCATGACATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTGACATTTGACCAGTCTGTATaGGCGTCATCGATAACCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGVVSSAIITIQRDWLLTFDQSV*ASSITN Trigger: GTTGGTTATCGATGACGCCCATACAGACTGGTCAAA...TGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACAGGACCGCACAATTTTaGTGCCATTTCTCACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: EPMCWKERPNSHQSSDHHRTAQF*CHFSQL Trigger: AAGTTGTGAGAAATGGCACCAAAATTGTGCGGTCCT...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTTTTCCCATGCCAGCATaGGCATGTCCCAGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: PTIMYAFDEGESRPRRGPFPMPA*ACPSLI Trigger: GATCAAGCTGGGACATGCCCATGCTGGCATGGGAAA...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR TCA 90 bp | AGACATCTCACTTGGTACCGGCGACAGGGGAGCAGGCATATGGTGGATGTAGTGTTCACTTTCTTCCCATaGAAATACTTTGACCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHLTWYRRQGSRHMVDVVFTFFP*KYFDQS Trigger: AGACTGGTCAAAGTATTTTCATGGGAAGAAAGTGAA...CACTACATCCACCATATGCCTGCTCCCCTGTCGCCGGTACCAAGTGAGATGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GTGGCAATGCCCGTAATCTCAGTGCTGGGAAAACAGAGACATGCAGATCTCTTCAAAACACCCAAGGCTTaGTGCAGAAGTTGTATACGG | + |
|
Preference number: 4 (lower is better) Translates to: VAMPVISVLGKQRHADLFKTPKA*CRSCIR Trigger: CCGTATACAACTTCTGCAGCAAGCCTTGGGTGTTTT...GAAGAGATCTGCATGTCTCTGTTTTCCCAGCACTGAGATTACGGGCATTGCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAAACAGGTCCTAGCTGGCCTTaGCCTGGAGATTTTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRGPLPKGKQNTNKTAKTGPSWP*PGDFAG Trigger: ACCTGCAAAATCTCCAGGGCAAGGCCAGCTAGGACC...TGTTTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTCCATTTCTCACAACTTaGATGTCCACCATGCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PTIMYAFDEGESRPRRGPPFLTT*MSTMQP Trigger: AGGCTGCATGGTGGACATGCAAGTTGTGAGAAATGG...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GAACCCATGTGTTGGAAAGAGAGACCCAACTCTCACCAGTCCTCTGACCACCACTTGGGGAAAAATGTTTaGTCCACTAGTGGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPMCWKERPNSHQSSDHHLGKNV*STSGNF Trigger: GAAATTTCCACTAGTGGAGCAAACATTTTTCCCCAA...GTGGTGGTCAGAGGACTGGTGAGAGTTGGGTCTCTCTTTCCAACACATGGGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGTGTTGTGAGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTTGACAAAATGCATTGGCTTGTaGTTGGGGAAAAATGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGVVSSAIITIQRDWLLTKCIGL*LGKNVC Trigger: GCAAACATTTTTCCCCAACCACAAGCCAATGCATTT...TGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCTCACAACACCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAAACACCTGGCACCAGGAGTTaGCTCATCTTGGAAACGACA | + |
|
Preference number: 4 (lower is better) Translates to: RRGPLPKGKQNTNKTAKTPGTRS*LILETT Trigger: TGTCGTTTCCAAGATGAGCCAACTCCTGGTGCCAGG...TGTTTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | TCATCAGTTCCTGCATCTTTAGGAAGCATATTTCCGTaGGGAACCAAGGCTGAGAAGGAGGGAACCAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVPASLGSIFP*GTKAEKEGTRE Trigger: TTCTCTGGTTCCCTCCTTCTCAGCCTTGGTTCCCAACGGAAATATGCTTCCTAAAGATGCAGGAACTGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | GTAAACGTGCTTGACACAAAGCCTGACAACCTGAGTTaGACATCCAGAACCCATGTGTTGGAAAGAGAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VNVLDTKPDNLS*TSRTHVLERET Trigger: GGTCTCTCTTTCCAACACATGGGTTCTGGATGTCAAACTCAGGTTGTCAGGCTTTGTGTCAAGCACGTTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CAA 72 bp | AGCTCAGCCATCATCACCATCCAGCGAGACTGGCTTTaGACAGTGGACACAGCTTCCATCAGAAAGAAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SSAIITIQRDWL*TVDTASIRKKI Trigger: AATTTTCTTTCTGATGGAAGCTGTGTCCACTGTCAAAAGCCAGTCTCGCTGGATGGTGATGATGGCTGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CAA 72 bp | ACAGTGAGCCAGAGACACTTGCAGCATGTCTGTGGCTaGGCTCCAATGTTTAGCTGGTCAAGTATATTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TVSQRHLQHVCG*APMFSWSSILQ Trigger: CTGTAATATACTTGACCAGCTAAACATTGGAGCCAAGCCACAGACATGCTGCAAGTGTCTCTGGCTCACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | CCGACTATAATGTATGCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTGCATTGGCTTGTGGTTaGGGAAAAATGTTTGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTIMYAFDEGESRPRRGPALACG*GKMFAP Trigger: TGGAGCAAACATTTTTCCCCAACCACAAGCCAATGC...AGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGCATACATTATAGTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AAGTGTCTACTGTGTGCAGGTACTGCACTGGCACACAGAGAAGCACCCAGGTTTATGAGTAAAATGCATTaGCTTGTGGTTGGGGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: KCLLCAGTALAHREAPRFMSKMH*LVVGEK Trigger: TTTTTCCCCAACCACAAGCCAATGCATTTTACTCAT...AAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGTAGACACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAAACAAGTAGAGGTCCTAGCTaGCCTTGCCCTGGAGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RRGPLPKGKQNTNKTAKTSRGPS*PCPGDF Trigger: AAAATCTCCAGGGCAAGGCCAGCTAGGACCTCTACT...TGTTTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAATGTATGCCTTGTAGTTaGATCCAATCTTCTGTATGC | + |
|
Preference number: 4 (lower is better) Translates to: GLEEGLCPKASKILIRLQCMPCS*IQSSVC Trigger: GCATACAGAAGATTGGATCCAACTACAAGGCATACA...TTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | GAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGTTGGGGAAAAATGTTTaGTCCACTAGTGGAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESRPRRGPLPKGKQNTNKLGKNV*STSGNF Trigger: GAAATTTCCACTAGTGGAGCAAACATTTTTCCCCAA...CTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CCA 90 bp | AATGGCTGTAGATCATCAGTTCCTGCATCTTTAGGAAGCATATTTCCGTTGGGAAGGACCGCACAATTTTaGTGCCATTTCTCACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: NGCRSSVPASLGSIFPLGRTAQF*CHFSQL Trigger: AAGTTGTGAGAAATGGCACCAAAATTGTGCGGTCCT...TCCCAACGGAAATATGCTTCCTAAAGATGCAGGAACTGATGATCTACAGCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR GCA 90 bp | AATGGCTGTAGATCATCAGTTCCTGCATCTTTAGGAAGCATATTTCCGTTGGGAATCCAATCTTCTGTATaGGGATGTCATACTTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: NGCRSSVPASLGSIFPLGIQSSV*GCHTWS Trigger: ACTCCAAGTATGACATCCGCATACAGAAGATTGGAT...TCCCAACGGAAATATGCTTCCTAAAGATGCAGGAACTGATGATCTACAGCCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| 3UTR CAA 72 bp | CAGAGAGGATCTTGTACATCTTCGGAGTTTAAGACTTaGTTCAGAGAGCCACAGAATATGAATAGATCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QRGSCTSSEFKT*FREPQNMNRSV Trigger: CACAGATCTATTCATATTCTGTGGCTCTCTGAACAAAGTCTTAAACTCCGAAGATGTACAAGATCCTCTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CAA 72 bp | TACACATACTTTGTGAATGGCCTCTTGGGCAATTTTTaGTCATCAAGGATATCTTCACAGACATTGCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: YTYFVNGLLGNF*SSRISSQTLLL Trigger: TAAGAGCAATGTCTGTGAAGATATCCTTGATGACAAAAAATTGCCCAAGAGGCCATTCACAAAGTATGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| 3UTR CAA 72 bp | CTATCAGAATATAATAAGGTATGCCATGAACATGTGTaGCCTGCCTACTTCTTAATCATTTGTCTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSEYNKVCHEHV*PAYFLIICLTE Trigger: TTCTGTGAGACAAATGATTAAGAAGTAGGCAGGCAACACATGTTCATGGCATACCTTATTATATTCTGATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS GCA 90 bp | CTGCCACCGGATGCCCGGGATAGCTGTGGAGACCCCGGTGACCTTTaGTGCTGTGGAGAGCCTGACTGGGGACTCACAGGCTGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPDARDSCGDPGDL*CCGEPDWGLTGCWP Trigger: AGGCCAGCAGCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCAGCAAAGGTCACCGGGGTCTCCACAGCTATCCCGGGCATCCGGTGGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 90 bp | GGAGGCCGGTTGTGTGAACTGAGGCTGGCACTTGGCTTGGAGGCCTaGTTTGGAGAACTGCCACCGGATGCCCGGGATAGCTGTGGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GGRLCELRLALGLEA*FGELPPDARDSCGD Trigger: GTCTCCACAGCTATCCCGGGCATCCGGTGGCAGTTCTCCAAACCAGGCCTCCAAGCCAAGTGCCAGCCTCAGTTCACACAACCGGCCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS GCA 90 bp | GGTGACCTTTGCTGCTGTGGAGAGCCTGACTGGGGACTCACAGGCTaGTGGCCTTGTGGCGAGAGTCGCTGTTGGGATGGACTCCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GDLCCCGEPDWGLTG*WPCGESRCWDGLLD Trigger: ATCTAGGAGTCCATCCCAACAGCGACTCTCGCCACAAGGCCAGCAGCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCAGCAAAGGTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 90 bp | GACCTTTGCTGCTGTGGAGAGCCTGACTGGGGACTCACAGGCTGCTaGCCTTGTGGCGAGAGTCGCTGTTGGGATGGACTCCTAGATCTG | + |
|
Preference number: 5 (lower is better) Translates to: DLCCCGEPDWGLTGC*PCGESRCWDGLLDL Trigger: CAGATCTAGGAGTCCATCCCAACAGCGACTCTCGCCACAAGGCCAGCAGCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCAGCAAAGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | TTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGCTGACGAGGGCCCCCTaGTGGAGGTGGCCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LRNLGAPKATIQSDSIGMLTRAP*WRWPWL Trigger: CAGCCAAGGCCACCTCCACAAGGGGGCCCTCGTCAG...CATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 90 bp | CAAGGTCTCAGAGGTGAGGGCACCGTGGCCCCTGGCACCAGGAGTTaGCTCATCTTGGAAACGACAAGGTCAGCCATTAGCTGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QGLRGEGTVAPGTRS*LILETTRSAISCLS Trigger: AGACAAGCAGCTAATGGCTGACCTTGTCGTTTCCAAGATGAGCCAACTCCTGGTGCCAGGGGCCACGGTGCCCTCACCTCTGAGACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | CCCGTGTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTAGGCTGGCACTTGGCTaGGAGGCCTGGTTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVLRNLGAPKATIQSDSIRLALG*EAWFGE Trigger: TTCTCCAAACCAGGCCTCCAAGCCAAGTGCCAGCCT...AATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAACACGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS TCA 90 bp | CAGTCTGTATGGGCGTCATCGATAACCAACAAGATCCTGGGTCTCTaGACCACGGGTGTGACAGGAGTGGGTGGTTCCATCAGCCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSVWASSITNKILGL*TTGVTGVGGSISPE Trigger: CTCAGGGCTGATGGAACCACCCACTCCTGTCACACCCGTGGTTCAGAGACCCAGGATCTTGTTGGTTATCGATGACGCCCATACAGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATTGGGCATGTCCCAGCTaGATCACCACGGGGAAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VEEPRGSQGYHSVRQHWNWACPS*ITTGKF Trigger: GAACTTCCCCGTGGTGATCAAGCTGGGACATGCCCA...ATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | GCATTTGATGAAGGTGAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGTGGCGAGAGTCGCTGTaGGGATGGACTCCTAGATCT | + |
|
Preference number: 5 (lower is better) Translates to: AFDEGESRPRRGPLPKGKWRESL*GWTPRS Trigger: AGATCTAGGAGTCCATCCCAACAGCGACTCTCGCCA...CTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTCACCTTCATCAAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS TCA 90 bp | AGCCTTGGCCTCATCTTCACTTGGGGTCCCTCGATGGGAGGTATCTaGTGTGCTGAGGCTGTTAGTCAGGGACTGAGATTTGTTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGLIFTWGPSMGGI*CAEAVSQGLRFVEV Trigger: CACCTCAACAAATCTCAGTCCCTGACTAACAGCCTCAGCACATCAGATACCTCCCATCGAGGGACCCCAAGTGAAGATGAGGCCAAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAGCTTGGAGGCCTGGTTaGGAGAACTGCCACCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPRRGPLPKGKQNTNKTAAWRPG*ENCHRM Trigger: CATCCGGTGGCAGTTCTCCAAACCAGGCCTCCAAGC...TGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGCCATTTCTCACAACTaGCATGTCCACCATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEEPRGSQGYHSVRQHWNAISHN*HVHHAA Trigger: GGCTGCATGGTGGACATGCAAGTTGTGAGAAATGGC...ATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTACTGTGTGCAGGTACTGCACTGGCACACAGAGAAGCACCCAGGTTTGCCATTTCTCACAACTaGCATGTCCACCATGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: KCLLCAGTALAHREAPRFAISHN*HVHHAA Trigger: GGCTGCATGGTGGACATGCAAGTTGTGAGAAATGGC...AAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGTAGACACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CAA 90 bp | GTTGAGGAACCTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATATAGCAGAGCCTGTATaGGCCTTCCAGTTTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VEEPRGSQGYHSVRQHWNIAEPV*AFQFPE Trigger: CTCTGGAAACTGGAAGGCCAATACAGGCTCTGCTAT...ATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAGGTTCCTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | GAGTCAAGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGTCCTCAGGTTGCGGATaGTCTCAGCCTTGGCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ESRPRRGPLPKGKQNTNKSSGCG*SQPWPH Trigger: ATGAGGCCAAGGCTGAGACAATCCGCAACCTGAGGA...CTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCTTGACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS GCA 90 bp | ACCAGGAGTTGGCTCATCTTGGAAACGACAAGGTCAGCCATTAGCTaGTTGTCTTCTTCCACGTGTTCTCCAATCAGGGGCATTGAACTG | + |
|
Preference number: 5 (lower is better) Translates to: TRSWLILETTRSAIS*LSSSTCSPIRGIEL Trigger: CAGTTCAATGCCCCTGATTGGAGAACACGTGGAAGAAGACAAGCAGCTAATGGCTGACCTTGTCGTTTCCAAGATGAGCCAACTCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | AAGTGTCTACTGTGTGCAGGTACTGCACTGGCACACAGAGAAGCACCCAGGTTTGAAAACACCCAAGGCTaGCTGCAGAAGTTGTATACG | + |
|
Preference number: 5 (lower is better) Translates to: KCLLCAGTALAHREAPRFENTQG*LQKLYT Trigger: CGTATACAACTTCTGCAGCAAGCCTTGGGTGTTTTC...AAACCTGGGTGCTTCTCTGTGTGCCAGTGCAGTACCTGCACACAGTAGACACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CAA 90 bp | CTAGGGGCTCCCAAGGCTACCATTCAGTCAGACAGCATTGGAATGTCATGGTCAGCTGTGAGCATTGGCTaGTGGTTGGGGAAAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: LGAPKATIQSDSIGMSWSAVSIG*WLGKNV Trigger: AACATTTTTCCCCAACCACAAGCCAATGCTCACAGC...TGACCATGACATTCCAATGCTGTCTGACTGAATGGTAGCCTTGGGAGCCCCTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | AACCAGAGAAAGGCTCCAGTGATCGAGTCTTCTTGCCTGCCTGCCTGTCTTCCATGCTGGTTTTCTACTTaGATCTTTCCCATGCCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: NQRKAPVIESSCLPACLPCWFST*IFPMPA Trigger: TGCTGGCATGGGAAAGATCAAAGTAGAAAACCAGCA...TGGAAGACAGGCAGGCAGGCAAGAAGACTCGATCACTGGAGCCTTTCTCTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAACGGATTGTCTCAGCCTaGGCCTCATCTTCACTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRGPLPKGKQNTNKTAKRIVSA*ASSSLG Trigger: CCCAAGTGAAGATGAGGCCAAGGCTGAGACAATCCG...TTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCTAGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAGCATTGGCTTGTGGTaGGGGAAAAATGTTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPRRGPLPKGKQNTNKTASIGLW*GKNVCS Trigger: GGAGCAAACATTTTTCCCCAACCACAAGCCAATGCT...TGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCTAGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS-3UTR CAA 90 bp | TTGTTCAGAGAGCCACAGAATATGAATAGATCTGTGAGACGACGATGGGCAGCATGCATTGGCTTGTGGTaGGGGAAAAATGTTTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFREPQNMNRSVRRRWAACIGLW*GKNVCS Trigger: GGAGCAAACATTTTTCCCCAACCACAAGCCAATGCA...TGCTGCCCATCGTCGTCTCACAGATCTATTCATATTCTGTGGCTCTCTGAACAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000121789.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGAGGGCCTCTGCCCAAAGGCAAGCAAAATACTAATAAGACTGCAAAAACAGAAAACACCCAAGGCTaGCTGCAGAAGTTGTATACG | + |
|
Preference number: 5 (lower is better) Translates to: RRGPLPKGKQNTNKTAKTENTQG*LQKLYT Trigger: CGTATACAACTTCTGCAGCAAGCCTTGGGTGTTTTC...TGTTTTTGCAGTCTTATTAGTATTTTGCTTGCCTTTGGGCAGAGGCCCTCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 72 bp | GCCTCCTCTCTGTGGCCGGGGATGCTGGAGAGCTACTaGAGCTCTCTGGGCGCTGCAGGTCCGGCATGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASSLWPGMLESY*SSLGAAGPACS Trigger: GCTACATGCCGGACCTGCAGCGCCCAGAGAGCTCCAGTAGCTCTCCAGCATCCCCGGCCACAGAGAGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
||
| CDS TCA 72 bp | GGAGGTGCTGCGTCCCTGCACTGGAGGCCGGTTGTGTaGACTGAGGCTGGCACTTGGCTTGGAGGCCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGAASLHWRPVV*TEAGTWLGGLV Trigger: AACCAGGCCTCCAAGCCAAGTGCCAGCCTCAGTTCACACAACCGGCCTCCAGTGCAGGGACGCAGCACCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS GCA 72 bp | GATGCCCGGGATAGCTGTGGAGACCCCGGTGACCTTTaGTGCTGTGGAGAGCCTGACTGGGGACTCACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: DARDSCGDPGDL*CCGEPDWGLTG Trigger: GCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCAGCAAAGGTCACCGGGGTCTCCACAGCTATCCCGGGCATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CAA 90 bp | CCCTGCACTGGAGGCCGGTTGTGTGAACTGAGGCTGGCACTTGGCTaGGAGGCCTGGTTTGGAGAACTGCCACCGGATGCCCGGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: PCTGGRLCELRLALG*EAWFGELPPDARDS Trigger: GCTATCCCGGGCATCCGGTGGCAGTTCTCCAAACCAGGCCTCCAAGCCAAGTGCCAGCCTCAGTTCACACAACCGGCCTCCAGTGCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS TCA 72 bp | CACGGGTGTGACAGGAGTGGGTGGTTCCATCAGCCCTaGGGGAGCCTGTGGGGTCTGTTTCATGGCACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: HGCDRSGWFHQP*GSLWGLFHGTG Trigger: TCCGGTGCCATGAAACAGACCCCACAGGCTCCCTCAGGGCTGATGGAACCACCCACTCCTGTCACACCCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
||
| CDS CCA 72 bp | TGCTGTGGAGAGCCTGACTGGGGACTCACAGGCTGCTaGCCTTGTGGCGAGAGTCGCTGTTGGGATGGACTC | + |
|
Preference number: 6 (lower is better) Translates to: CCGEPDWGLTGC*PCGESRCWDGL Trigger: GAGTCCATCCCAACAGCGACTCTCGCCACAAGGCCAGCAGCCTGTGAGTCCCCAGTCAGGCTCTCCACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 72 bp | TCTGTGGACCCCAAGGTCTCAGAGGTGAGGGCACCGTaGCCCCTGGCACCAGGAGTTGGCTCATCTTGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: SVDPKVSEVRAP*PLAPGVGSSWK Trigger: TTTCCAAGATGAGCCAACTCCTGGTGCCAGGGGCCACGGTGCCCTCACCTCTGAGACCTTGGGGTCCACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 72 bp | AGAGGTGAGGGCACCGTGGCCCCTGGCACCAGGAGTTaGCTCATCTTGGAAACGACAAGGTCAGCCATTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGEGTVAPGTRS*LILETTRSAIS Trigger: GCTAATGGCTGACCTTGTCGTTTCCAAGATGAGCCAACTCCTGGTGCCAGGGGCCACGGTGCCCTCACCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CCA 72 bp | TTGTGTGAACTGAGGCTGGCACTTGGCTTGGAGGCCTaGTTTGGAGAACTGCCACCGGATGCCCGGGATAGC | + |
|
Preference number: 6 (lower is better) Translates to: LCELRLALGLEA*FGELPPDARDS Trigger: GCTATCCCGGGCATCCGGTGGCAGTTCTCCAAACCAGGCCTCCAAGCCAAGTGCCAGCCTCAGTTCACACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CAA 72 bp | ACTCACAGGCTGCTGGCCTTGTGGCGAGAGTCGCTGTaGGGATGGACTCCTAGATCTGGGAGGCTGAGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: THRLLALWRESL*GWTPRSGRLRR Trigger: TCTCCTCAGCCTCCCAGATCTAGGAGTCCATCCCAACAGCGACTCTCGCCACAAGGCCAGCAGCCTGTGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS GCA 72 bp | ATGCTGATTTTTGAGGCTCTTCACCCTGCTGGGAGGTaGTGCGTCCCTGCACTGGAGGCCGGTTGTGTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: MLIFEALHPAGR*CVPALEAGCVN Trigger: GTTCACACAACCGGCCTCCAGTGCAGGGACGCAGCACCTCCCAGCAGGGTGAAGAGCCTCAAAAATCAGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS GCA 72 bp | TCCACCCACAGCCTGTACCTTTCTGTCATGGCCACCTaGTCCAGCATAGCAGAGCCTGTATTGGCCTTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: STHSLYLSVMAT*SSIAEPVLAFQ Trigger: CTGGAAGGCCAATACAGGCTCTGCTATGCTGGAGCAGGTGGCCATGACAGAAAGGTACAGGCTGTGGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS TCA 72 bp | TGGGCGTCATCGATAACCAACAAGATCCTGGGTCTCTaGACCACGGGTGTGACAGGAGTGGGTGGTTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: WASSITNKILGL*TTGVTGVGGSI Trigger: GATGGAACCACCCACTCCTGTCACACCCGTGGTTCAGAGACCCAGGATCTTGTTGGTTATCGATGACGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
||
| CDS CCA 72 bp | TCAGCCTTGGCCTCATCTTCACTTGGGGTCCCTCGATaGGAGGTATCTGATGTGCTGAGGCTGTTAGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SALASSSLGVPR*EVSDVLRLLVR Trigger: CCTGACTAACAGCCTCAGCACATCAGATACCTCCCATCGAGGGACCCCAAGTGAAGATGAGGCCAAGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
||
| CDS CAA 72 bp | TTGATCTTTCCCATGCCAGCATGGGCATGTCCCAGCTaGATCACCACGGGGAAGTTCGGGGCTGTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: LIFPMPAWACPS*ITTGKFGAVSI Trigger: AATGCTCACAGCCCCGAACTTCCCCGTGGTGATCAAGCTGGGACATGCCCATGCTGGCATGGGAAAGATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS TCA 72 bp | CTCATCTTCACTTGGGGTCCCTCGATGGGAGGTATCTaGTGTGCTGAGGCTGTTAGTCAGGGACTGAGATTT | + |
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Preference number: 6 (lower is better) Translates to: LIFTWGPSMGGI*CAEAVSQGLRF Trigger: AAATCTCAGTCCCTGACTAACAGCCTCAGCACATCAGATACCTCCCATCGAGGGACCCCAAGTGAAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS GCA 72 bp | TGGCTCATCTTGGAAACGACAAGGTCAGCCATTAGCTaGTTGTCTTCTTCCACGTGTTCTCCAATCAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: WLILETTRSAIS*LSSSTCSPIRG Trigger: GCCCCTGATTGGAGAACACGTGGAAGAAGACAAGCAGCTAATGGCTGACCTTGTCGTTTCCAAGATGAGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS CCA 72 bp | TGCTGGTTTTCTACTTTGATCTTTCCCATGCCAGCATaGGCATGTCCCAGCTTGATCACCACGGGGAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: CWFSTLIFPMPA*ACPSLITTGKF Trigger: GAACTTCCCCGTGGTGATCAAGCTGGGACATGCCCATGCTGGCATGGGAAAGATCAAAGTAGAAAACCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS CAA 90 bp | GTCAGGTTTGAAGGACCGCACAATTTTGGTGCCATTTCTCACAACTaGCATGTCCACCATGCAGCCTCCGGTAACATAAGCAGCCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: VRFEGPHNFGAISHN*HVHHAASGNISSQV Trigger: AACCTGGCTGCTTATGTTACCGGAGGCTGCATGGTGGACATGCAAGTTGTGAGAAATGGCACCAAAATTGTGCGGTCCTTCAAACCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
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| CDS CAA 90 bp | AGGAGTTGGCTCATCTTGGAAACGACAAGGTCAGCCATTAGCTGCTaGTCTTCTTCCACGTGTTCTCCAATCAGGGGCATTGAACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: RSWLILETTRSAISC*SSSTCSPIRGIELS Trigger: GGACAGTTCAATGCCCCTGATTGGAGAACACGTGGAAGAAGACAAGCAGCTAATGGCTGACCTTGTCGTTTCCAAGATGAGCCAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS CAA 72 bp | CTCATCTTGGAAACGACAAGGTCAGCCATTAGCTGCTaGTCTTCTTCCACGTGTTCTCCAATCAGGGGCATT | + |
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Preference number: 6 (lower is better) Translates to: LILETTRSAISC*SSSTCSPIRGI Trigger: AATGCCCCTGATTGGAGAACACGTGGAAGAAGACAAGCAGCTAATGGCTGACCTTGTCGTTTCCAAGATGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120638.8 |
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| CDS CAA 72 bp | ACCAGGATGAAGTCAGGTTTGAAGGACCGCACAATTTaGGTGCCATTTCTCACAACTTGCATGTCCACCATG | + |
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Preference number: 6 (lower is better) Translates to: TRMKSGLKDRTI*VPFLTTCMSTM Trigger: CATGGTGGACATGCAAGTTGTGAGAAATGGCACCAAAATTGTGCGGTCCTTCAAACCTGACTTCATCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120638.8 ENSMUST00000121789.2 |
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