Pregenerated sensors for SYF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028821Ensembl transcript IDs: ENSMUST00000030622.3
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTaGTTCTCAGTCCCCTCCTGGCCAGTCCCAAAGCCCGGCTGGAGC | + |
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Preference number: 1 (lower is better) Translates to: RAQCQNSRSICLNSL*FSVPSWPVPKPGWS Trigger: GCTCCAGCCGGGCTTTGGGACTGGCCAGGAGGGGACTGAGAAGCAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR CCA 90 bp | CTGACTCCAGTCCGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCTTCTCAGTCCCCTCCTaGCCAGTCCCAAAGCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: LTPVRAQCQNSRSICLNSFSVPS*PVPKPG Trigger: GCCGGGCTTTGGGACTGGCCAGGAGGGGACTGAGAA...GCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCGGACTGGAGTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTGCTTCTCAGTCCCAAAGCCCGGCTaGAGCTTCCGTCTTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: RAQCQNSRSICLNSLCFSVPKPG*SFRLPP Trigger: AGGAGGAAGACGGAAGCTCCAGCCGGGCTTTGGGAC...TGAGAAGCAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTCCGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTGTCCCACGAGGGAGGTTaGATTTGCCAGCAGAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SSPGTVPELQEHLSQQPLSHEGG*ICQQKP Trigger: AGGCTTCTGCTGGCAAATTCAACCTCCCTCGTGGGA...CAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCGGACTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR GCA 90 bp | TCCAAAGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGTGTCTCAACAGCCTCTaGTTCTCAGTCCCCTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SKAFYCSLKRECARLTAMCLNSL*FSVPSW Trigger: CCAGGAGGGGACTGAGAAGCAGAGGCTGTTGAGACA...CATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCTTTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACTCAAAAGCAGCAGTaGCTGCACCCGTGTACATCT | + |
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Preference number: 2 (lower is better) Translates to: SKAFYCSLKRECARLTAMTQKQQ*LHPCTS Trigger: AGATGTACACGGGTGCAGTCACTGCTGCTTTTGAGT...CATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCTTTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR GCA 72 bp | TGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTaGTTCTCAGTCCCCTCCTGGCCAGTCCCAAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: CQNSRSICLNSL*FSVPSWPVPKP Trigger: GGGCTTTGGGACTGGCCAGGAGGGGACTGAGAAGCAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR CCA 72 bp | TTCTCAGTCCCCTCCTGGCCAGTCCCAAAGCCCGGCTaGAGCTTCCGTCTTCCTCCTAACAACACTCAAAAG | + |
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Preference number: 3 (lower is better) Translates to: FSVPSWPVPKPG*SFRLPPNNTQK Trigger: CTTTTGAGTGTTGTTAGGAGGAAGACGGAAGCTCCAGCCGGGCTTTGGGACTGGCCAGGAGGGGACTGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR-3UTR CAA 90 bp | TCCAAAGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGCGAGGGAGGTTGAATTaGCCAGCAGAAGCCTCCGAC | + |
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Preference number: 3 (lower is better) Translates to: SKAFYCSLKRECARLTAMRGRLN*PAEASD Trigger: GTCGGAGGCTTCTGCTGGCAAATTCAACCTCCCTCG...CATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCTTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| 3UTR GCA 72 bp | GTCTTCCTCCTAACAACACTCAAAAGCAGCAGTGACTaGACCCGTGTACATCTAAGCCCCAATAATTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: VFLLTTLKSSSD*TRVHLSPNNSK Trigger: CTTTGAATTATTGGGGCTTAGATGTACACGGGTGCAGTCACTGCTGCTTTTGAGTGTTGTTAGGAGGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR TCA 90 bp | CGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTGCTTCTCATGCTTGGTCAGCCGGTaGTACTGGCGTAATTGGGCA | + |
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Preference number: 4 (lower is better) Translates to: RAQCQNSRSICLNSLCFSCLVSR*YWRNWA Trigger: TGCCCAATTACGCCAGTATCACCGGCTGACCAAGCA...TGAGAAGCAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR TCA 90 bp | CGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTGCTTCTCATCTGTCAATTTCCTCTaGGGAAGGCACGTGCGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RAQCQNSRSICLNSLCFSSVNFL*GRHVRP Trigger: GGGACGCACGTGCCTTCCTCAGAGGAAATTGACAGA...TGAGAAGCAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR GCA 90 bp | GTGGGGAGGCAGGGGAAGTGGGACAGTAATCGACTGGTCCCACGAGGGAGGTTGCTTGGCTTCCCAGTTTaGAGGCAACTTAAGTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: VGRQGKWDSNRLVPRGRLLGFPV*RQLKSF Trigger: AAAAGACTTAAGTTGCCTGCAAACTGGGAAGCCAAG...CAACCTCCCTCGTGGGACCAGTCGATTACTGTCCCACTTCCCCTGCCTCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR TCA 90 bp | TCCAGTCCGGGCACAGTGCCAGAACTCCAGGAGCATCTGTCTCAACAGCCTCTGTCTCTGCTTTCTTGTTaGACTTGGCGTTCCTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SSPGTVPELQEHLSQQPLSLLSC*TWRSSH Trigger: ATGAGAGGAACGCCAAGTTCAACAAGAAAGCAGAGA...CAGAGGCTGTTGAGACAGATGCTCCTGGAGTTCTGGCACTGTGCCCGGACTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR TCA 90 bp | AGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACCTCCAGCGTCCTCTGCGCTaGTCTCCAGCAACTTCACCT | + |
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Preference number: 4 (lower is better) Translates to: SILLFFKKGVCTADGHDLQRPLR*SPATSP Trigger: AGGTGAAGTTGCTGGAGATCAGCGCAGAGGACGCTG...GAGGTCATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR CCA 90 bp | AGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACCTCTTCTTCTCCTCTTCCTaGAGCTCCCACTCCAGACGC | + |
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Preference number: 4 (lower is better) Translates to: SILLFFKKGVCTADGHDLFFSSS*SSHSRR Trigger: GCGTCTGGAGTGGGAGCTCCAGGAAGAGGAGAAGAA...GAGGTCATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR GCA 90 bp | CAAAGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACTCTGAGGAAGGCACGTaGGTCCCATGGAGAAGACTG | + |
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Preference number: 4 (lower is better) Translates to: QSILLFFKKGVCTADGHDSEEGT*VPWRRL Trigger: CAGTCTTCTCCATGGGACGCACGTGCCTTCCTCAGA...GTCATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR CCA 90 bp | AGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACCTCGGCACGTGCGTCCCATaGAGAAGACTGTTGGATGTT | + |
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Preference number: 4 (lower is better) Translates to: SILLFFKKGVCTADGHDLGTCVP*RRLLDV Trigger: AACATCCAACAGTCTTCTCCATGGGACGCACGTGCC...GAGGTCATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR TCA 90 bp | AGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGACCTCTCCACAACTTCCTGGTaGTTCAGCTTACGAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SILLFFKKGVCTADGHDLSTTSW*FSLRAS Trigger: TGAAGCTCGTAAGCTGAATCACCAGGAAGTTGTGGA...GAGGTCATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR GCA 90 bp | GCACAAAAATGTGAACATATGCATGTGGCAGAGGAGGTGAGAAAAGACATTTATCCCGTAGAACCTCTCTaGTTTCTTGTTGAACTTGGC | + |
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Preference number: 4 (lower is better) Translates to: AQKCEHMHVAEEVRKDIYPVEPL*FLVELG Trigger: GCCAAGTTCAACAAGAAAGCAGAGAGGTTCTACGGG...ATAAATGTCTTTTCTCACCTCCTCTGCCACATGCATATGTTCACATTTTTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS GCA 90 bp | GCTTCATTCCGCTTCAGATGCAGCTCACGGAACTTGCGTAGTCTCTaGTCCCGCTTCTGCGCCGCCAGCTCCTCGGCCGCCAAGGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: ASFRFRCSSRNLRSL*SRFCAASSSAAKGL Trigger: CAGGCCCTTGGCGGCCGAGGAGCTGGCGGCGCAGAAGCGGGAGCAGAGACTACGCAAGTTCCGTGAGCTGCATCTGAAGCGGAATGAAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS GCA 90 bp | TCAGCTTACGAGCTTCATTCCGCTTCAGATGCAGCTCACGGAACTTaGGTAGTCTCTGCTCCCGCTTCTGCGCCGCCAGCTCCTCGGCCG | + |
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Preference number: 5 (lower is better) Translates to: SAYELHSASDAAHGT*VVSAPASAPPAPRP Trigger: CGGCCGAGGAGCTGGCGGCGCAGAAGCGGGAGCAGAGACTACGCAAGTTCCGTGAGCTGCATCTGAAGCGGAATGAAGCTCGTAAGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR CAA 90 bp | TCCAAAGCATTTTATTGTTCTTTAAAAAGGGAGTGTGCACGGCTGACGGCCATGGCTTTCTTGTTGAACTaGGCGTTCCTCTCATTGATG | + |
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Preference number: 5 (lower is better) Translates to: SKAFYCSLKRECARLTAMAFLLN*AFLSLM Trigger: CATCAATGAGAGGAACGCCAAGTTCAACAAGAAAGC...CATGGCCGTCAGCCGTGCACACTCCCTTTTTAAAGAACAATAAAATGCTTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS-3UTR CAA 90 bp | GCACAAAAATGTGAACATATGCATGTGGCAGAGGAGGTGAGAAAAGACATTTATCTCTCTGCTTTCTTGTaGAACTTGGCGTTCCTCTCA | + |
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Preference number: 5 (lower is better) Translates to: AQKCEHMHVAEEVRKDIYLSAFL*NLAFLS Trigger: TGAGAGGAACGCCAAGTTCAACAAGAAAGCAGAGAG...ATAAATGTCTTTTCTCACCTCCTCTGCCACATGCATATGTTCACATTTTTGTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS CCA 72 bp | GCTTCTGCGCCGCCAGCTCCTCGGCCGCCAAGGGCCTaGCTTCCGCGCCATCCGCGGGGACCACAACTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ASAPPAPRPPRA*LPRHPRGPQLQ Trigger: CTGAAGTTGTGGTCCCCGCGGATGGCGCGGAAGCCAGGCCCTTGGCGGCCGAGGAGCTGGCGGCGCAGAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS GCA 72 bp | AGCTCACGGAACTTGCGTAGTCTCTGCTCCCGCTTCTaGGCCGCCAGCTCCTCGGCCGCCAAGGGCCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSRNLRSLCSRF*AASSSAAKGLA Trigger: AGCCAGGCCCTTGGCGGCCGAGGAGCTGGCGGCGCAGAAGCGGGAGCAGAGACTACGCAAGTTCCGTGAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS GCA 72 bp | CGCTTCAGATGCAGCTCACGGAACTTGCGTAGTCTCTaGTCCCGCTTCTGCGCCGCCAGCTCCTCGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: RFRCSSRNLRSL*SRFCAASSSAA Trigger: GGCGGCCGAGGAGCTGGCGGCGCAGAAGCGGGAGCAGAGACTACGCAAGTTCCGTGAGCTGCATCTGAAGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS CAA 90 bp | TTCAGCTTACGAGCTTCATTCCGCTTCAGATGCAGCTCACGGAACTaGCGTAGTCTCTGCTCCCGCTTCTGCGCCGCCAGCTCCTCGGCC | + |
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Preference number: 6 (lower is better) Translates to: FSLRASFRFRCSSRN*RSLCSRFCAASSSA Trigger: GGCCGAGGAGCTGGCGGCGCAGAAGCGGGAGCAGAGACTACGCAAGTTCCGTGAGCTGCATCTGAAGCGGAATGAAGCTCGTAAGCTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS CAA 72 bp | TCCTCTTCCTGGAGCTCCCACTCCAGACGCGCTTTCTaGGCTTCCCAGTTTGCAGGCAACTTAAGTCTTTTG | + |
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Preference number: 6 (lower is better) Translates to: SSSWSSHSRRAF*ASQFAGNLSLL Trigger: CAAAAGACTTAAGTTGCCTGCAAACTGGGAAGCCAAGAAAGCGCGTCTGGAGTGGGAGCTCCAGGAAGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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| CDS CAA 90 bp | TTTTTCTTCTCCTCTTCCTGGAGCTCCCACTCCAGACGCGCTTTCTaGGCTTCCCAGTTTGCAGGCAACTTAAGTCTTTTGTCTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: FFFSSSWSSHSRRAF*ASQFAGNLSLLSSS Trigger: GGAAGAAGACAAAAGACTTAAGTTGCCTGCAAACTGGGAAGCCAAGAAAGCGCGTCTGGAGTGGGAGCTCCAGGAAGAGGAGAAGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030622.3 |
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