Pregenerated sensors for SYDE2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036863Ensembl transcript IDs: ENSMUST00000039517.11, ENSMUST00000200546.2, ENSMUST00000212479.2
Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TGCACAGGGACTCTGACTGCAAATCAGTCCAGCTGCAGTGTCCTCTaGAGAGAACATCCGTCTCCACGTACAGAAGAACATTCTCGCCGA | + |
Preference number: 1 (lower is better) Translates to: CTGTLTANQSSCSVL*REHPSPRTEEHSRR Trigger: TCGGCGAGAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTGGACTGATTTGCAGTCAGAGTCCCTGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR TCA 90 bp | GTAGCATTCTGGCAAGATGACTTCCTTAGAAACAAGGGCAGTTACTaGAGTCAGCATGTTAAGGATACCTCTATAAATAAATACTTAGAG | + |
Preference number: 1 (lower is better) Translates to: VAFWQDDFLRNKGSY*SQHVKDTSINKYLE Trigger: CTCTAAGTATTTATTTATAGAGGTATCCTTAACATGCTGACTTCAGTAACTGCCCTTGTTTCTAAGGAAGTCATCTTGCCAGAATGCTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR GCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGTCTGGTTACCTTTATaGCCAGAACAGCTCAGTTCA | + |
Preference number: 2 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSVWLPL*PEQLSS Trigger: TGAACTGAGCTGTTCTGGGCATAAAGGTAACCAGAC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR TCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTATTGCACAGGGACTCTaGCTGCAAATCAGTCCAGCT | + |
Preference number: 2 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAIAQGL*LQISPA Trigger: AGCTGGACTGATTTGCAGTCAGAGTCCCTGTGCAAT...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAAGCTGCAGTGTCCTCTaGAGAGAACATCCGTCTCCA | + |
Preference number: 2 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKSCSVL*REHPSP Trigger: TGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAACACAGGGACTCTGACTaGAAATCAGTCCAGCTGCAG | + |
Preference number: 2 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKHRDSD*KSVQLQ Trigger: CTGCAGCTGGACTGATTTGCAGTCAGAGTCCCTGTG...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGTCTGGTTACCTTTATaGCCAGAACAGCTCAGTTCA | + |
Preference number: 2 (lower is better) Translates to: ERLQHKIQLSTGETVSTKVWLPL*PEQLSS Trigger: TGAACTGAGCTGTTCTGGGCATAAAGGTAACCAGAC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTTAAAATATTTGGAATaGTGTAACCAACCCCTTCCC | + |
Preference number: 2 (lower is better) Translates to: NFPQGRLCLQSKNRKAIALKYLE*CNQPLP Trigger: GGGAAGGGGTTGGTTACAGCATTCCAAATATTTTAA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR CCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATCTCCTCCATACAACTaGCAAGGTTTATTAAACTAT | + |
Preference number: 2 (lower is better) Translates to: LQHKIQLSTGETVSTKQKSPPYN*QGLLNY Trigger: ATAGTTTAATAAACCTTGCCAGTTGTATGGAGGAGA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR GCA 72 bp | CATTGCACAGGGACTCTGACTGCAAATCAGTCCAGCTaGAGTGTCCTCTGCAGAGAACATCCGTCTCCACGT | + |
Preference number: 3 (lower is better) Translates to: HCTGTLTANQSS*SVLCREHPSPR Trigger: ACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTGGACTGATTTGCAGTCAGAGTCCCTGTGCAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR CCA 72 bp | CAACTGGCAAGGTTTATTAAACTATCCCCCAAGGTCTaGTTACCTTTATGCCCAGAACAGCTCAGTTCACAA | + |
Preference number: 3 (lower is better) Translates to: QLARFIKLSPKV*LPLCPEQLSSQ Trigger: TTGTGAACTGAGCTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGCCAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR CCA 72 bp | ACCCTTACAAACATCTGCATGTCTCCTCCATACAACTaGCAAGGTTTATTAAACTATCCCCCAAGGTCTGGT | + |
Preference number: 3 (lower is better) Translates to: TLTNICMSPPYN*QGLLNYPPRSG Trigger: ACCAGACCTTGGGGGATAGTTTAATAAACCTTGCCAGTTGTATGGAGGAGACATGCAGATGTTTGTAAGGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTATGACCAAATGACATaGCACAGGGACTCTGACTGC | + |
Preference number: 3 (lower is better) Translates to: ERLQHKIQLSTGETVSTKYDQMT*HRDSDC Trigger: GCAGTCAGAGTCCCTGTGCAATGTCATTTGGTCATA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR-3UTR CAA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATATGACCAAATGACATaGCACAGGGACTCTGACTGC | + |
Preference number: 3 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKYDQMT*HRDSDC Trigger: GCAGTCAGAGTCCCTGTGCAATGTCATTTGGTCATA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR TCA 72 bp | AAACAAAAAGCACGGGTACTTTCTCTAGAAAACATTTaGAATGTTAACCCATGGTGTACACCTGCATCACCT | + |
Preference number: 3 (lower is better) Translates to: KQKARVLSLENI*NVNPWCTPASP Trigger: AGGTGATGCAGGTGTACACCATGGGTTAACATTTCAAATGTTTTCTAGAGAAAGTACCCGTGCTTTTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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3UTR TCA 72 bp | TGGCAAGATGACTTCCTTAGAAACAAGGGCAGTTACTaGAGTCAGCATGTTAAGGATACCTCTATAAATAAA | + |
Preference number: 3 (lower is better) Translates to: WQDDFLRNKGSY*SQHVKDTSINK Trigger: TTTATTTATAGAGGTATCCTTAACATGCTGACTTCAGTAACTGCCCTTGTTTCTAAGGAAGTCATCTTGCCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCAGAGCGGCGGCCTCCTaGGCCCCGCGAGACCATGGC | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFRAAAS*APRDHG Trigger: GCCATGGTCTCGCGGGGCGCAGGAGGCCGCCGCTCT...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGACGTAGCAGCCCTGTaGCTGCCCGGGCTCCAGCCG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSDVAAL*LPGLQP Trigger: CGGCTGGAGCCCGGGCAGCCACAGGGCTGCTACGTC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGACCCGCTGGGGTCATaGCAGATGGGAGGCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFDPLGS*QMGGRR Trigger: TCTCCTGCCTCCCATCTGCCATGACCCCAGCGGGTC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTGTCCGCCCCGCCGCGTaGCCGAGTCAGGGGGTAGGT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSVRPAA*PSQGVG Trigger: ACCTACCCCCTGACTCGGGCACGCGGCGGGGCGGAC...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGCTGCTCCAGTCTCCTaGATAGCGGTTGCTGAGTGG | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFAAPVS*IAVAEW Trigger: CCACTCAGCAACCGCTATGCAGGAGACTGGAGCAGC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCCACCTCCACGTGGCTaGGGCTCGTCCCTGTCCCGG | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAPPPRG*GSSLSR Trigger: CCGGGACAGGGACGAGCCCCAGCCACGTGGAGGTGG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR CCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTGACGTAGCAGCCCTGTaGCTGCCCGGGCTCCAGCCG | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIADVAAL*LPGLQP Trigger: CGGCTGGAGCCCGGGCAGCCACAGGGCTGCTACGTC...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGGTGCGCACCGCACCTaGTGCAGCTGTCGCTCGCCC | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKGAHRT*CSCRSP Trigger: GGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTCGTCCCTGTCCCGGTaGGCACCGCACCTGATGCAG | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIASSLSR*APHLMQ Trigger: CTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGCTGCTCCAGTCTCCTaGATAGCGGTTGCTGAGTGG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSAAPVS*IAVAEW Trigger: CCACTCAGCAACCGCTATGCAGGAGACTGGAGCAGC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGGGGTAGGTCGTGCATaGCCTGGATCAGCAGATAAT | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFGVGRA*PGSADN Trigger: ATTATCTGCTGATCCAGGCCATGCACGACCTACCCC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGACAGTCACCGCAGGTaGCTTGAGGGGAAGATCCTC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSDSHRR*LEGKIL Trigger: GAGGATCTTCCCCTCAAGCCACCTGCGGTGACTGTC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGACCTCAGGGTGCTCTaGTACAGCCAATTGCGCTTC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSDLRVL*YSQLRF Trigger: GAAGCGCAATTGGCTGTATCAGAGCACCCTGAGGTC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCCAGGAGGTCCACAGTaGGCCTGGAGTCACTGGGCT | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAPGGPQ*AWSHWA Trigger: AGCCCAGTGACTCCAGGCTCACTGTGGACCTCCTGG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAACTGGGTCTGCAGCCTaGCCGTCTCCAGGCGGCCGC | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKTGSAA*PSPGGR Trigger: GCGGCCGCCTGGAGACGGGCAGGCTGCAGACCCAGT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCATCCCACCTCCACGTaGCTGGGGCTCGTCCCTGTC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSHPTST*LGLVPV Trigger: GACAGGGACGAGCCCCAGCCACGTGGAGGTGGGATG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGCCGAGAGGATACGGTaGTATCAAGATGGTACCGGC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSAERIR*YQDGTG Trigger: GCCGGTACCATCTTGATACCACCGTATCCTCTCGGC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGAAGCCTCTTGCCTCTaGTTAAGCAACACTGGTCCA | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFEASCL*LSNTGP Trigger: TGGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTGGGGTCATGGCAGATaGGAGGCAGGAGAGCGGCGG | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKWGHGR*EAGERR Trigger: CCGCCGCTCTCCTGCCTCCCATCTGCCATGACCCCA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTGACCCGCTGGGGTCATaGCAGATGGGAGGCAGGAGA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSDPLGS*QMGGRR Trigger: TCTCCTGCCTCCCATCTGCCATGACCCCAGCGGGTC...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCCTGGTTAAGCAACACTaGTCCAAAGCACACAGCCAA | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFLVKQH*SKAHSQ Trigger: TTGGCTGTGTGCTTTGGACCAGTGTTGCTTAACCAG...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCAAGACTCTGTTGTTGTaGGTTGAAGCCTCTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFKTLLL*VEASCL Trigger: GAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTT...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCCTTTCTGATCCACCGTaGATTCAATGGTCTGTACCG | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFLSDPP*IQWSVP Trigger: CGGTACAGACCATTGAATCCACGGTGGATCAGAAAG...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGGACCTCAGGGTGCTCTaGTACAGCCAATTGCGCTTC | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQDLRVL*YSQLRF Trigger: GAAGCGCAATTGGCTGTATCAGAGCACCCTGAGGTC...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCAGGGCGGCGGTGTTTaGCTCCTCAAGACTCAAGAC | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAQGGGV*LLKTQD Trigger: GTCTTGAGTCTTGAGGAGGCAAACACCGCCGCCCTG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCCTTTCTTGTGTCCTGTaGCCTAACCTTTGTTTGCAG | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFLSCVL*PNLCLQ Trigger: CTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAG...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGCCCCCAGCTTTCGGCTaGATTCTGGCAACCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQPPAFG*ILATFS Trigger: TGAAAAGGTTGCCAGAATTCAGCCGAAAGCTGGGGG...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTCCCGGAAGTCAGAGTaGCACCCTGAGGAATTTCTC | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQSRKSE*HPEEFL Trigger: GAGAAATTCCTCAGGGTGTCACTCTGACTTCCGGGA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCTCTGGGCTCCAGCTTaGCAGCCAGCTGATGCGTTT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSLWAPA*QPADAF Trigger: AAACGCATCAGCTGGCTGTCAAGCTGGAGCCCAGAG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACCAGGAGGTCCACAGTaGGCCTGGAGTCACTGGGCT | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKPGGPQ*AWSHWA Trigger: AGCCCAGTGACTCCAGGCTCACTGTGGACCTCCTGG...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCGCCACCAGTTTCAGATaGTCCAACAACATCTTCAGG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSATSFR*SNNIFR Trigger: CCTGAAGATGTTGTTGGATCATCTGAAACTGGTGGC...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATCTCGCAACTGGGTCTaGAGCCTGCCCGTCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKSRNWV*SLPVSR Trigger: CCTGGAGACGGGCAGGCTGCAGACCCAGTTGCGAGA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTCAGGGGGTAGGTCGTaGATGGCCTGGATCAGCAGA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSSGGRS*MAWISR Trigger: TCTGCTGATCCAGGCCATGCACGACCTACCCCCTGA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTTTGGAGAGGTTGTCTaGGCTCCGGGAACTTTGGGT | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQFGEVV*APGTLG Trigger: ACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCACCAGCTTCAGATGCTaGGCATTTTCAATCTCTATG | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFTSFRC*AFSISM Trigger: CATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGT...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTAGCTCTCCCCACAGCTaGTCCAGTCTCCTGCATAGC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSSSPHS*SSLLHS Trigger: GCTATGCAGGAGACTGGAGCAGCTGTGGGGAGAGCT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGCTCACGTTCCAGATTaGCAATCAAAGTATCAATGC | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFAHVPD*QSKYQC Trigger: GCATTGATACTTTGATTGGCAATCTGGAACGTGAGC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCCTTCATCAGATCTCTaGCAGACAACATGCTCACAG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSPSSDL*QTTCSQ Trigger: CTGTGAGCATGTTGTCTGCCAGAGATCTGATGAAGG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCTGGTTAAGCAACACTaGTCCAAAGCACACAGCCAA | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSLVKQH*SKAHSQ Trigger: TTGGCTGTGTGCTTTGGACCAGTGTTGCTTAACCAG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTCTGTTGTTGTGGGTTaGAGCCTCTTGCCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQSVVVG*SLLPLV Trigger: AACCAGAGGCAAGAGGCTTCAACCCACAACAACAGA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCTCAGCTTGTTTTTGTTaGGCTCACGTTCCAGATTGC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSSACFC*AHVPDC Trigger: GCAATCTGGAACGTGAGCTCAACAAAAACAAGCTGA...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAGGGCGGCGGTGTTTaGCTCCTCAAGACTCAAGAC | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKQGGGV*LLKTQD Trigger: GTCTTGAGTCTTGAGGAGGCAAACACCGCCGCCCTG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCTCTGGCAGACAACATaGTCACAGGAAGCTTCAGGG | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIALWQTT*SQEASG Trigger: CCCTGAAGCTTCCTGTGAGCATGTTGTCTGCCAGAG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCTTTCTTGTGTCCTGTaGCCTAACCTTTGTTTGCAG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSLSCVL*PNLCLQ Trigger: CTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGAGCTCTCCCCACAGCTaGTCCAGTCTCCTGCATAGC | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKSSPHS*SSLLHS Trigger: GCTATGCAGGAGACTGGAGCAGCTGTGGGGAGAGCT...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCGTATCAATGCTCTCTTaGAAATCTCTGAGGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFVSMLS*KSLRLA Trigger: AGCTAACCTCAGAGATTTGCAAGAGAGCATTGATAC...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGACAGTCACCGCAGGTaGCTTGAGGGGAAGATCCTC | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKDSHRR*LEGKIL Trigger: GAGGATCTTCCCCTCAAGCCACCTGCGGTGACTGTC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCTTTCCTCACAGTGCGTaGAGACTTTATTTTATCTGG | + |
Preference number: 4 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFFPHSA*RLYFIW Trigger: CCAGATAAAATAAAGTCTCCACGCACTGTGAGGAAA...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCGTTCTCACAACCACTaGACGACATTTTCAAAGGAC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSRSHNH*TTFSKD Trigger: GTCCTTTGAAAATGTCGTCCAGTGGTTGTGAGAACG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACTTCTGCAGTTTCTTaGCAGTCACCGCAGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSTSAVS*QSPQVA Trigger: AGCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCCCCCAGCTTTCGGCTaGATTCTGGCAACCTTTTCA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSPPAFG*ILATFS Trigger: TGAAAAGGTTGCCAGAATTCAGCCGAAAGCTGGGGG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACTCTGGGCTCCAGCTTaGCAGCCAGCTGATGCGTTT | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKLWAPA*QPADAF Trigger: AAACGCATCAGCTGGCTGTCAAGCTGGAGCCCAGAG...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCTGCATAGCGGTTGCTaGGTGGACTGTCTAATCGGG | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKLHSGC*VDCLIG Trigger: CCCGATTAGACAGTCCACTCAGCAACCGCTATGCAG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCATTTTTGCTACAACTaGTTGGGACAGTTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSHFCYN*LGQFLS Trigger: GGAGAGAAACTGTCCCAAGCAGTTGTAGCAAAAATG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGGTCCTCTTGGCTGCTaGATATCACAGAGGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKGPLGC*ISQRSP Trigger: TGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTACCCAATGCTTGGGTaGAGACACAGGAGAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSYPMLG*RHRREG Trigger: TCCCTCTCTCCTGTGTCTCCACCCAAGCATTGGGTA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGACGGTGGTATCAAGATaGTACCGGCTTATCACGTTC | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQTVVSR*YRLITF Trigger: GAACGTGATAAGCCGGTACCATCTTGATACCACCGT...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCCAATTGCGCTTCTTTaGAACTGTGATGTTGTTAAG | + |
Preference number: 4 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSPIALL*NCDVVK Trigger: CTTAACAACATCACAGTTTCAAAGAAGCGCAATTGG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGAGAAGTGTACGCTCATaGGGCCGGATATGTACTGCG | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKRSVRS*GRICTA Trigger: CGCAGTACATATCCGGCCTCATGAGCGTACACTTCT...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTCAAGACGTGTGCTATaGCCAAGCTGTCATCCTCAG | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSSRRVL*PSCHPQ Trigger: CTGAGGATGACAGCTTGGGCATAGCACACGTCTTGA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCCTTTCCCAAGTTTGTaGTCCGATCCATGCTTGCTA | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAPFPSL*SDPCLL Trigger: TAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAAGGTCCTCTTGGCTGCTaGATATCACAGAGGTCCCCA | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKGPLGC*ISQRSP Trigger: TGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACC...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTAAGACTCTGTTGTTGTaGGTTGAAGCCTCTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAKTLLL*VEASCL Trigger: GAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTT...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAAACTTCTGCAGTTTCTTaGCAGTCACCGCAGGTGGCT | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKTSAVS*QSPQVA Trigger: AGCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGT...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATCCCGGAAGTCAGAGTaGCACCCTGAGGAATTTCTC | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKSRKSE*HPEEFL Trigger: GAGAAATTCCTCAGGGTGTCACTCTGACTTCCGGGA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAAGAAGTGTACGCTCATaGGGCCGGATATGTACTGCG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKRSVRS*GRICTA Trigger: CGCAGTACATATCCGGCCTCATGAGCGTACACTTCT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTAGCTTGACAGCCAGCTaGTGCGTTTTTGTAACTCTG | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSSLTAS*CVFVTL Trigger: CAGAGTTACAAAAACGCATCAGCTGGCTGTCAAGCT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTCTGTTGTTGTGGGTTaGAGCCTCTTGCCTCTGGTT | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKSVVVG*SLLPLV Trigger: AACCAGAGGCAAGAGGCTTCAACCCACAACAACAGA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTTGGAGAGGTTGTCTaGGCTCCGGGAACTTTGGGT | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFGEVV*APGTLG Trigger: ACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTCAAGACGTGTGCTATaGCCAAGCTGTCATCCTCAG | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKSRRVL*PSCHPQ Trigger: CTGAGGATGACAGCTTGGGCATAGCACACGTCTTGA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGACCAGCTTCAGATGCTaGGCATTTTCAATCTCTATG | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQTSFRC*AFSISM Trigger: CATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGT...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTCTTATCCAGGCCGTaGAGAGAATTCTCCCACTGT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSFLSRP*REFSHC Trigger: ACAGTGGGAGAATTCTCTGCACGGCCTGGATAAGAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
||
CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTTTCAATCTCCACGATaGATTTCTGTATCAGCAGCG | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQFQSPR*ISVSAA Trigger: CGCTGCTGATACAGAAATGCATCGTGGAGATTGAAA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
||
CDS-3UTR CCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTTCTCGTTTCTTCAGTaGAGAGCCATAGACATTCTC | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQFSFLQ*RAIDIL Trigger: GAGAATGTCTATGGCTCTCCACTGAAGAAACGAGAA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATACCCAATGCTTGGGTaGAGACACAGGAGAGAGGGA | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKYPMLG*RHRREG Trigger: TCCCTCTCTCCTGTGTCTCCACCCAAGCATTGGGTA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTGTACTGCGAGCATTTaGGTTGATCCGCAAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSCTASI*VDPQSC Trigger: ACAGCTTTGCGGATCAACCCAAATGCTCGCAGTACA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTCTATGTTGAACGTGTaGTCCATGTCTAAGAAGGTC | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQSMLNV*SMSKKV Trigger: GACCTTCTTAGACATGGACCACACGTTCAACATAGA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAGGCTCTCGAGACTTCTaGAACTGGACAGTTGTATCC | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKGSRDF*NWTVVS Trigger: GGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCC...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTTGTACATCCACTTCTaGAGTTTCTTGACAGTCACC | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIALYIHF*SFLTVT Trigger: GGTGACTGTCAAGAAACTGCAGAAGTGGATGTACAA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTAGGACGTGGTTTTCATaGACTTTCCAACTGCCCAAA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSRTWFS*TFQLPK Trigger: TTTGGGCAGTTGGAAAGTGCATGAAAACCACGTCCT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
||
CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTGTCTAGTTCATTTTTaGTACAACTGCTTGGGACAG | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQCLVHF*YNCLGQ Trigger: CTGTCCCAAGCAGTTGTAGCAAAAATGAACTAGACA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTTCTTATCCAGGCCGTaGAGAGAATTCTCCCACTGT | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKFLSRP*REFSHC Trigger: ACAGTGGGAGAATTCTCTGCACGGCCTGGATAAGAA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAGCCTCATACAGCTaGTTGGTTATTAGGGGAGAA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSTASYS*LVIRGE Trigger: TTCTCCCCTAATAACCAAGCAGCTGTATGAGGCTGT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCCTTCATCAGATCTCTaGCAGACAACATGCTCACAG | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKPSSDL*QTTCSQ Trigger: CTGTGAGCATGTTGTCTGCCAGAGATCTGATGAAGG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAGAAGCCTCTTGCCTCTaGTTAAGCAACACTGGTCCA | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKEASCL*LSNTGP Trigger: TGGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTC...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCCAATTGCGCTTCTTTaGAACTGTGATGTTGTTAAG | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAPIALL*NCDVVK Trigger: CTTAACAACATCACAGTTTCAAAGAAGCGCAATTGG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTCACTGAGTCTACCTaGATGGCACAAAACACATCT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSFTEST*MAQNTS Trigger: AGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAAGCTTGACAGCCAGCTaGTGCGTTTTTGTAACTCTG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKSLTAS*CVFVTL Trigger: CAGAGTTACAAAAACGCATCAGCTGGCTGTCAAGCT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAAGCCACCAGTTTCAGATaGTCCAACAACATCTTCAGG | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKATSFR*SNNIFR Trigger: CCTGAAGATGTTGTTGGATCATCTGAAACTGGTGGC...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAACTGAGGTTAGCTTTCTaGTCCACCGTGGATTCAATG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKLRLAF*STVDSM Trigger: CATTGAATCCACGGTGGATCAGAAAGCTAACCTCAG...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTGTACATCCACTTCTaGAGTTTCTTGACAGTCACC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSLYIHF*SFLTVT Trigger: GGTGACTGTCAAGAAACTGCAGAAGTGGATGTACAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGAGGACGTGGTTTTCATaGACTTTCCAACTGCCCAAA | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKRTWFS*TFQLPK Trigger: TTTGGGCAGTTGGAAAGTGCATGAAAACCACGTCCT...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCATTTTTGCTACAACTaGTTGGGACAGTTTCTCTCC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSHFCYN*LGQFLS Trigger: GGAGAGAAACTGTCCCAAGCAGTTGTAGCAAAAATG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGACAGCCTCATACAGCTaGTTGGTTATTAGGGGAGAA | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKTASYS*LVIRGE Trigger: TTCTCCCCTAATAACCAAGCAGCTGTATGAGGCTGT...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTGCTCACGTTCCAGATTaGCAATCAAAGTATCAATGC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSAHVPD*QSKYQC Trigger: GCATTGATACTTTGATTGGCAATCTGGAACGTGAGC...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGCTTTCGGCTGAATTCTaGCAACCTTTTCATTTTCAT | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQLSAEF*QPFHFH Trigger: ATGAAAATGAAAAGGTTGCCAGAATTCAGCCGAAAG...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAACGGTGGTATCAAGATaGTACCGGCTTATCACGTTC | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKTVVSR*YRLITF Trigger: GAACGTGATAAGCCGGTACCATCTTGATACCACCGT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATGTACTGCGAGCATTTaGGTTGATCCGCAAAGCTGT | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKCTASI*VDPQSC Trigger: ACAGCTTTGCGGATCAACCCAAATGCTCGCAGTACA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCGTTCTCACAACCACTaGACGACATTTTCAAAGGAC | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKRSHNH*TTFSKD Trigger: GTCCTTTGAAAATGTCGTCCAGTGGTTGTGAGAACG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAACTTTCTGATCCACCGTaGATTCAATGGTCTGTACCG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKLSDPP*IQWSVP Trigger: CGGTACAGACCATTGAATCCACGGTGGATCAGAAAG...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATCAGCTTGTTTTTGTTaGGCTCACGTTCCAGATTGC | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKSACFC*AHVPDC Trigger: GCAATCTGGAACGTGAGCTCAACAAAAACAAGCTGA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTCTTTGTTTGCAGTGCTaGATAATTTCTGTAGAATGC | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIALCLQC*IISVEC Trigger: GCATTCTACAGAAATTATGCAGCACTGCAAACAAAG...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGAACCTTTGTTTGCAGTaGTGCATAATTTCTGTAGAA | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQNLCLQ*CIISVE Trigger: TTCTACAGAAATTATGCAGCACTGCAAACAAAGGTT...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGAAAGTTTCCTCACAGTaGGTGGAGACTTTATTTTAT | + |
Preference number: 4 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQKVSSQ*VETLFY Trigger: ATAAAATAAAGTCTCCACGCACTGTGAGGAAACTTT...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTTTGCTACAACTGCTTaGGACAGTTTCTCTCCCTTT | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKFATTA*DSFSPF Trigger: AAAGGGAGAGAAACTGTCCCAAGCAGTTGTAGCAAA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR TCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTCACTGAGTCTACCTaGATGGCACAAAACACATCT | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFTEST*MAQNTS Trigger: AGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCTTTGTTTGCAGTGCTaGATAATTTCTGTAGAATGC | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSLCLQC*IISVEC Trigger: GCATTCTACAGAAATTATGCAGCACTGCAAACAAAG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTAACCTTTGTTTGCAGTaGTGCATAATTTCTGTAGAA | + |
Preference number: 4 (lower is better) Translates to: NFPQGRLCLQSKNRKAIANLCLQ*CIISVE Trigger: TTCTACAGAAATTATGCAGCACTGCAAACAAAGGTT...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGTATCAATGCTCTCTTaGAAATCTCTGAGGTTAGCT | + |
Preference number: 4 (lower is better) Translates to: ERLQHKIQLSTGETVSTKVSMLS*KSLRLA Trigger: AGCTAACCTCAGAGATTTGCAAGAGAGCATTGATAC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATTCTCGTTTCTTCAGTaGAGAGCCATAGACATTCTC | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKFSFLQ*RAIDIL Trigger: GAGAATGTCTATGGCTCTCCACTGAAGAAACGAGAA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCTTTCGGCTGAATTCTaGCAACCTTTTCATTTTCAT | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSLSAEF*QPFHFH Trigger: ATGAAAATGAAAAGGTTGCCAGAATTCAGCCGAAAG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTTGCTACAACTGCTTaGGACAGTTTCTCTCCCTTT | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFATTA*DSFSPF Trigger: AAAGGGAGAGAAACTGTCCCAAGCAGTTGTAGCAAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAACTGAGTCTACCTGAATaGCACAAAACACATCTTTCG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKLSLPE*HKTHLS Trigger: CGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAG...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACTGAGTCTACCTGAATaGCACAAAACACATCTTTCG | + |
Preference number: 4 (lower is better) Translates to: LQHKIQLSTGETVSTKQKLSLPE*HKTHLS Trigger: CGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAG...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTTATATCTGGGTACTaGTTTTCACACAGACCAACA | + |
Preference number: 4 (lower is better) Translates to: EAERLQHKIQLSTGETVSFISGY*FSHRPT Trigger: TGTTGGTCTGTGTGAAAACCAGTACCCAGATATAAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTTCCTCACAGTGCGTaGAGACTTTATTTTATCTGG | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFPHSA*RLYFIW Trigger: CCAGATAAAATAAAGTCTCCACGCACTGTGAGGAAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTTATATCTGGGTACTaGTTTTCACACAGACCAACA | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFISGY*FSHRPT Trigger: TGTTGGTCTGTGTGAAAACCAGTACCCAGATATAAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR GCA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAAAAGTTTCCTCACAGTaGGTGGAGACTTTATTTTAT | + |
Preference number: 4 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKKVSSQ*VETLFY Trigger: ATAAAATAAAGTCTCCACGCACTGTGAGGAAACTTT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 36% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | CTCCACGTGGCTGGGGCTCGTCCCTGTCCCGGTGCGCACCGCACCTaGTGCAGCTGTCGCTCGCCCACCGCTGGAGCAGAGGCGGCCGCC | + |
Preference number: 5 (lower is better) Translates to: LHVAGARPCPGAHRT*CSCRSPTAGAEAAA Trigger: GGCGGCCGCCTCTGCTCCAGCGGTGGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGCCACGTGGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS GCA 90 bp | CCGTCCATCCCACCTCCACGTGGCTGGGGCTCGTCCCTGTCCCGGTaGGCACCGCACCTGATGCAGCTGTCGCTCGCCCACCGCTGGAGC | + |
Preference number: 5 (lower is better) Translates to: PSIPPPRGWGSSLSR*APHLMQLSLAHRWS Trigger: GCTCCAGCGGTGGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGCCACGTGGAGGTGGGATGGACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 90 bp | TCCCGGTGCGCACCGCACCTGATGCAGCTGTCGCTCGCCCACCGCTaGAGCAGAGGCGGCCGCCGGCTCACGCGGAGGCTCTCGAGACTT | + |
Preference number: 5 (lower is better) Translates to: SRCAPHLMQLSLAHR*SRGGRRLTRRLSRL Trigger: AAGTCTCGAGAGCCTCCGCGTGAGCCGGCGGCCGCCTCTGCTCCAGCGGTGGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACCGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 90 bp | CTGTGGCTGCCCGGGCTCCAGCCGTCCATCCCACCTCCACGTGGCTaGGGCTCGTCCCTGTCCCGGTGCGCACCGCACCTGATGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: LWLPGLQPSIPPPRG*GSSLSRCAPHLMQL Trigger: CAGCTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGCCACGTGGAGGTGGGATGGACGGCTGGAGCCCGGGCAGCCACAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS GCA 90 bp | GGAGCAGAGGCGGCCGCCGGCTCACGCGGAGGCTCTCGAGACTTCTaGAACTGGACAGTTGTATCCGAGGACTGGGAGGCCGTCCCTCTC | + |
Preference number: 5 (lower is better) Translates to: GAEAAAGSRGGSRDF*NWTVVSEDWEAVPL Trigger: GAGAGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCCGCGTGAGCCGGCGGCCGCCTCTGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 90 bp | CGGGTCCGCCCCGCCGCGTGCCCGAGTCAGGGGGTAGGTCGTGCATaGCCTGGATCAGCAGATAATAGGCCTCTCGCAACTGGGTCTGCA | + |
Preference number: 5 (lower is better) Translates to: RVRPAACPSQGVGRA*PGSADNRPLATGSA Trigger: TGCAGACCCAGTTGCGAGAGGCCTATTATCTGCTGATCCAGGCCATGCACGACCTACCCCCTGACTCGGGCACGCGGCGGGGCGGACCCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 90 bp | GGAGGCTCTCGAGACTTCTGCAACTGGACAGTTGTATCCGAGGACTaGGAGGCCGTCCCTCTCTCGACTCCGTCGGAGGCGACCGGGGCG | + |
Preference number: 5 (lower is better) Translates to: GGSRDFCNWTVVSED*EAVPLSTPSEATGA Trigger: CGCCCCGGTCGCCTCCGACGGAGTCGAGAGAGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 90 bp | GAGGCGGCCGCCGGCTCACGCGGAGGCTCTCGAGACTTCTGCAACTaGACAGTTGTATCCGAGGACTGGGAGGCCGTCCCTCTCTCGACT | + |
Preference number: 5 (lower is better) Translates to: EAAAGSRGGSRDFCN*TVVSEDWEAVPLST Trigger: AGTCGAGAGAGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCCGCGTGAGCCGGCGGCCGCCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS GCA 90 bp | ACTGCCCAAATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTTGGGTaGTGTCCCGCGATCGCGACCCTTCATCCCCAGGGACAGCAGACG | + |
Preference number: 5 (lower is better) Translates to: TAQIWRGCLRSGNFG*CPAIATLHPQGQQT Trigger: CGTCTGCTGTCCCTGGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | GGGTTGCCTTCTCAACGTCCGGCAGGCAATCCAGGAGGTCCACAGTaGGCCTGGAGTCACTGGGCTCGTTCTCACAACCACTGGACGACA | + |
Preference number: 5 (lower is better) Translates to: GLPSQRPAGNPGGPQ*AWSHWARSHNHWTT Trigger: TGTCGTCCAGTGGTTGTGAGAACGAGCCCAGTGACTCCAGGCTCACTGTGGACCTCCTGGATTGCCTGCCGGACGTTGAGAAGGCAACCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | TCCAACTGCCCAAATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTTaGGTGCTGTCCCGCGATCGCGACCCTTCATCCCCAGGGACAGCA | + |
Preference number: 5 (lower is better) Translates to: SNCPNLERLSALREL*VLSRDRDPSSPGTA Trigger: TGCTGTCCCTGGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | GTCACCGCAGGTGGCTTGAGGGGAAGATCCTCCGGATGGTCCTCTTaGCTGCTGGATATCACAGAGGTCCCCACAGGATCCTTAAAGGGT | + |
Preference number: 5 (lower is better) Translates to: VTAGGLRGRSSGWSS*LLDITEVPTGSLKG Trigger: ACCCTTTAAGGATCCTGTGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | TTCTTGACAGTCACCGCAGGTGGCTTGAGGGGAAGATCCTCCGGATaGTCCTCTTGGCTGCTGGATATCACAGAGGTCCCCACAGGATCC | + |
Preference number: 5 (lower is better) Translates to: FLTVTAGGLRGRSSG*SSWLLDITEVPTGS Trigger: GGATCCTGTGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGACTGTCAAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | GTAGCCCTGGCAGCATTACACACCGCATGTGTGCAGTGCGGCCTGTaGGATACCCAATGCTTGGGTGGAGACACAGGAGAGAGGGAGAAA | + |
Preference number: 5 (lower is better) Translates to: VALAALHTACVQCGL*DTQCLGGDTGEREK Trigger: TTTCTCCCTCTCTCCTGTGTCTCCACCCAAGCATTGGGTATCCCACAGGCCGCACTGCACACATGCGGTGTGTAATGCTGCCAGGGCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | TGCCATGACAGCACACGCGGTTCCTCCTCGGCGTGGGCTCCCAGCTaGACACCACCAGCTTCAGATGCTGCGCATTTTCAATCTCTATGT | + |
Preference number: 5 (lower is better) Translates to: CHDSTRGSSSAWAPS*TPPASDAAHFQSLC Trigger: ACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCACGCCGAGGAGGAACCGCGTGTGCTGTCATGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | AGCTCCCAAGGGGTTTCTTCCGGTAGCTGTGCCGAGAGGATACGGTaGTATCAAGATGGTACCGGCTTATCACGTTCCTGGTGGTGTTCC | + |
Preference number: 5 (lower is better) Translates to: SSQGVSSGSCAERIR*YQDGTGLSRSWWCS Trigger: GGAACACCACCAGGAACGTGATAAGCCGGTACCATCTTGATACCACCGTATCCTCTCGGCACAGCTACCGGAAGAAACCCCTTGGGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | GTAGGAGGCCACCAGTTTCAGATGATCCAACAACATCTTCAGGGTTaGCTTCTCAACGTCCGGCAGGCAATCCAGGAGGTCCACAGTGAG | + |
Preference number: 5 (lower is better) Translates to: VGGHQFQMIQQHLQG*LLNVRQAIQEVHSE Trigger: CTCACTGTGGACCTCCTGGATTGCCTGCCGGACGTTGAGAAGGCAACCCTGAAGATGTTGTTGGATCATCTGAAACTGGTGGCCTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCTCCCAGGACTGGGGCTaGGAGAAGACGGCTCCATCG | + |
Preference number: 5 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSSQDWG*EKTAPS Trigger: CGATGGAGCCGTCTTCTCCAAGCCCCAGTCCTGGGA...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | TCCGGGGCGGTTTTAAACCCTCAGCTCCATAGAAGTGTACGCTCATaGGGCCGGATATGTACTGCGAGCATTTGGGTTGATCCGCAAAGC | + |
Preference number: 5 (lower is better) Translates to: SGAVLNPQLHRSVRS*GRICTASIWVDPQS Trigger: GCTTTGCGGATCAACCCAAATGCTCGCAGTACATATCCGGCCTCATGAGCGTACACTTCTATGGAGCTGAGGGTTTAAAACCGCCCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | CTCCTCGGCGTGGGCTCCCAGCTGAACACCACCAGCTTCAGATGCTaGGCATTTTCAATCTCTATGTTGAACGTGTGGTCCATGTCTAAG | + |
Preference number: 5 (lower is better) Translates to: LLGVGSQLNTTSFRC*AFSISMLNVWSMSK Trigger: CTTAGACATGGACCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCACGCCGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | TTCCTCCTCGGCGTGGGCTCCCAGCTGAACACCACCAGCTTCAGATaGTGCGCATTTTCAATCTCTATGTTGAACGTGTGGTCCATGTCT | + |
Preference number: 5 (lower is better) Translates to: FLLGVGSQLNTTSFR*CAFSISMLNVWSMS Trigger: AGACATGGACCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCACGCCGAGGAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCCTAATCGGGCCTGCCTaGTCCTCAGCACCCCTGATG | + |
Preference number: 5 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSLIGPA*SSAPLM Trigger: CATCAGGGGTGCTGAGGACAAGGCAGGCCCGATTAG...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | TTTGTGCTCCGATCCATGCTTGCTAGATCTAGTTCTCAGTTCGGGTaGGTCTCCGTCGCTGAGGTACCCACCCTTGCAGGAATACTTCGA | + |
Preference number: 5 (lower is better) Translates to: FVLRSMLARSSSQFG*VSVAEVPTLAGILR Trigger: TCGAAGTATTCCTGCAAGGGTGGGTACCTCAGCGACGGAGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | CTTGGGACAGTTTCTCTCCCTTTCCCAAGTTTGTGCTCCGATCCATaGTTGCTAGATCTAGTTCTCAGTTCGGGTGAGTCTCCGTCGCTG | + |
Preference number: 5 (lower is better) Translates to: LGTVSLPFPSLCSDP*LLDLVLSSGESPSL Trigger: CAGCGACGGAGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGGGAGAGAAACTGTCCCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCTCCAACTGCCCAAATTaGGAGAGGTTGTCTGCGCTC | + |
Preference number: 5 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFSNCPN*ERLSAL Trigger: GAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGA...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | ACTCTGAGACCTCAGGGTGCTCTGATACAGCCAATTGCGCTTCTTTaGAACTGTGATGTTGTTAAGGGGCTGGTGACCTCTAAGCTCGGC | + |
Preference number: 5 (lower is better) Translates to: TLRPQGALIQPIALL*NCDVVKGLVTSKLG Trigger: GCCGAGCTTAGAGGTCACCAGCCCCTTAACAACATCACAGTTTCAAAGAAGCGCAATTGGCTGTATCAGAGCACCCTGAGGTCTCAGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | CCATATTTCTCCTTCATCGTCCGCATCATTGTCCTCGCTAAAGGCTaGAGAGCCGTTTCTGGACAACGTAGCCCTGGCAGCATTACACAC | + |
Preference number: 5 (lower is better) Translates to: PYFSFIVRIIVLAKG*RAVSGQRSPGSITH Trigger: GTGTGTAATGCTGCCAGGGCTACGTTGTCCAGAAACGGCTCTTCAGCCTTTAGCGAGGACAATGATGCGGACGATGAAGGAGAAATATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | CGACAGGTGAGCAGGGCCGTTCTGGCTTTGTTCACTGAGTCTACCTaGATGGCACAAAACACATCTTTCGAATCTATCCGGGGCGGTTTT | + |
Preference number: 5 (lower is better) Translates to: RQVSRAVLALFTEST*MAQNTSFESIRGGF Trigger: AAAACCGCCCCGGATAGATTCGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAACAAAGCCAGAACGGCCCTGCTCACCTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | GAAGGTCGTCCGACAGGTGAGCAGGGCCGTTCTGGCTTTGTTCACTaGGTCTACCTGAATGGCACAAAACACATCTTTCGAATCTATCCG | + |
Preference number: 5 (lower is better) Translates to: EGRPTGEQGRSGFVH*VYLNGTKHIFRIYP Trigger: CGGATAGATTCGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAACAAAGCCAGAACGGCCCTGCTCACCTGTCGGACGACCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | ACCAGCTTCAGATGCTGCGCATTTTCAATCTCTATGTTGAACGTGTaGTCCATGTCTAAGAAGGTCGTCCGACAGGTGAGCAGGGCCGTT | + |
Preference number: 5 (lower is better) Translates to: TSFRCCAFSISMLNV*SMSKKVVRQVSRAV Trigger: AACGGCCCTGCTCACCTGTCGGACGACCTTCTTAGACATGGACCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | CCTTGTCGGGATAATAATGTACCCGACCCTTACAAACATCTGCATGTCTCCTCCTGGGATACCCAATGCTaGGGTGGAGACACAGGAGAG | + |
Preference number: 5 (lower is better) Translates to: PCRDNNVPDPYKHLHVSSWDTQC*GGDTGE Trigger: CTCTCCTGTGTCTCCACCCAAGCATTGGGTATCCCA...GGAGGAGACATGCAGATGTTTGTAAGGGTCGGGTACATTATTATCCCGACAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTCCCAGGACTGGGGCTaGGAGAAGACGGCTCCATCG | + |
Preference number: 5 (lower is better) Translates to: NFPQGRLCLQSKNRKAIASQDWG*EKTAPS Trigger: CGATGGAGCCGTCTTCTCCAAGCCCCAGTCCTGGGA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | CTTATCACGTTCCTGGTGGTGTTCCCGGAAGTCAGAGTGACACCCTaGGGAATTTCTCGACAGTTCCATTTAGACAAAGGAGGGGTGCTA | + |
Preference number: 5 (lower is better) Translates to: LITFLVVFPEVRVTP*GISRQFHLDKGGVL Trigger: TAGCACCCCTCCTTTGTCTAAATGGAACTGTCGAGAAATTCCTCAGGGTGTCACTCTGACTTCCGGGAACACCACCAGGAACGTGATAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | ACTGGCAAGCTCTTCAGAATCGGTGAAGACTCTGTTGTTGTGGGTTaGAGCCTCTTGCCTCTGGTTAAGCAACACTGGTCCAAAGCACAC | + |
Preference number: 5 (lower is better) Translates to: TGKLFRIGEDSVVVG*SLLPLVKQHWSKAH Trigger: GTGTGCTTTGGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTTCACCGATTCTGAAGAGCTTGCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 90 bp | TCAGAGAAGACGACTGCTCCAGGCACAAACTGTCTCTGGGTTCTTTaGCAGTTAAGCGTTGCACTGGCCAGAGCTGGAGCAAGTAATGAA | + |
Preference number: 5 (lower is better) Translates to: SEKTTAPGTNCLWVL*QLSVALARAGASNE Trigger: TTCATTACTTGCTCCAGCTCTGGCCAGTGCAACGCTTAACTGTCAAAGAACCCAGAGACAGTTTGTGCCTGGAGCAGTCGTCTTCTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | GAATGCATGGAATCTGCAGAATTAATTCCATTTGACTGTGAGGTCTaGACGTCCCCTCTGTCTTCACTAGGAGGCTCCGCCTTCATCAGA | + |
Preference number: 5 (lower is better) Translates to: ECMESAELIPFDCEV*TSPLSSLGGSAFIR Trigger: TCTGATGAAGGCGGAGCCTCCTAGTGAAGACAGAGGGGACGTGCAGACCTCACAGTCAAATGGAATTAATTCTGCAGATTCCATGCATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | TTCAACACAGGGCTATCCTCTGCCGTCGGGCTTTCTTGTGTCCTGTaGCCTAACCTTTGTTTGCAGTGCTGCATAATTTCTGTAGAATGC | + |
Preference number: 5 (lower is better) Translates to: FNTGLSSAVGLSCVL*PNLCLQCCIISVEC Trigger: GCATTCTACAGAAATTATGCAGCACTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAGCCCGACGGCAGAGGATAGCCCTGTGTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 90 bp | TCTGCTGTCAGTGTGATTCTTTGGTCCGTTGTCACCGAGAGGACGTaGTTTTCATGCACTTTCCAACTGCCCAAATTTGGAGAGGTTGTC | + |
Preference number: 5 (lower is better) Translates to: SAVSVILWSVVTERT*FSCTFQLPKFGEVV Trigger: GACAACCTCTCCAAATTTGGGCAGTTGGAAAGTGCATGAAAACCACGTCCTCTCGGTGACAACGGACCAAAGAATCACACTGACAGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGCACTTCTGCAGTTTCTaGACAGTCACCGCAGGTGGC | + |
Preference number: 5 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQHFCSF*TVTAGG Trigger: GCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGTG...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS GCA 90 bp | TCTTCAGAATCGGTGAAGACTCTGTTGTTGTGGGTTGAAGCCTCTTaGCTCTGGTTAAGCAACACTGGTCCAAAGCACACAGCCAAATTC | + |
Preference number: 5 (lower is better) Translates to: SSESVKTLLLWVEAS*LWLSNTGPKHTAKF Trigger: GAATTTGGCTGTGTGCTTTGGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTTCACCGATTCTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTGGGATACCCAATGCTaGGGTGGAGACACAGGAGAG | + |
Preference number: 5 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAWDTQC*GGDTGE Trigger: CTCTCCTGTGTCTCCACCCAAGCATTGGGTATCCCA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGCTCTGTTGTTGTGGGTaGAAGCCTCTTGCCTCTGGT | + |
Preference number: 5 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQLCCCG*KPLASG Trigger: ACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAG...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCTAATCGGGCCTGCCTaGTCCTCAGCACCCCTGATG | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKLIGPA*SSAPLM Trigger: CATCAGGGGTGCTGAGGACAAGGCAGGCCCGATTAG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CAGCTGCAGTGTCCTCTGCAGAGAACATCCGTCTCCACGTACAGAAGAACATTCACACTCATGTTCAGCTaGTTTTTGTTGAGCTCACGT | + |
Preference number: 5 (lower is better) Translates to: QLQCPLQRTSVSTYRRTFTLMFS*FLLSSR Trigger: ACGTGAGCTCAACAAAAACAAGCTGAACATGAGTGT...GAATGTTCTTCTGTACGTGGAGACGGATGTTCTCTGCAGAGGACACTGCAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | TCAGTGGAGAGCCATAGACATTCTCAAATAAGTCTGCTGTCAGTGTaGTTCTTTGGTCCGTTGTCACCGAGAGGACGTGGTTTTCATGCA | + |
Preference number: 5 (lower is better) Translates to: SVESHRHSQISLLSV*FFGPLSPRGRGFHA Trigger: TGCATGAAAACCACGTCCTCTCGGTGACAACGGACCAAAGAATCACACTGACAGCAGACTTATTTGAGAATGTCTATGGCTCTCCACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCTGAGGTACCCACCCTaGCAGGAATACTTCGAGCTC | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSLRYPP*QEYFEL Trigger: GAGCTCGAAGTATTCCTGCAAGGGTGGGTACCTCAG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGCACAGACCAACAGTCTaGCTGTCCTTCTCAAAAGCC | + |
Preference number: 5 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQHRPTV*LSFSKA Trigger: GGCTTTTGAGAAGGACAGCAAGACTGTTGGTCTGTG...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCACTTCTGCAGTTTCTaGACAGTCACCGCAGGTGGC | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKHFCSF*TVTAGG Trigger: GCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGTG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTCCAACTGCCCAAATTaGGAGAGGTTGTCTGCGCTC | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSSNCPN*ERLSAL Trigger: GAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCTGAGGTACCCACCCTaGCAGGAATACTTCGAGCTC | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKLRYPP*QEYFEL Trigger: GAGCTCGAAGTATTCCTGCAAGGGTGGGTACCTCAG...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTGTGAAGACTCTGTTGTaGTGGGTTGAAGCCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAVKTLL*WVEASC Trigger: GCAAGAGGCTTCAACCCACAACAACAGAGTCTTCAC...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 90 bp | ATATGTACTGCGAGCATTTGGGTTGATCCGCAAAGCTGTAATGTCTaGAGGCACCGATGTCTAGTTCATTTTTGCTACAACTGCTTGGGA | + |
Preference number: 5 (lower is better) Translates to: ICTASIWVDPQSCNV*RHRCLVHFCYNCLG Trigger: TCCCAAGCAGTTGTAGCAAAAATGAACTAGACATCGGTGCCTTCAGACATTACAGCTTTGCGGATCAACCCAAATGCTCGCAGTACATAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 90 bp | GCCGTCGGGCTTTCTTGTGTCCTGTGCCCTAACCTTTGTTTGCAGTaGTGCATAATTTCTGTAGAATGCATGGAATCTGCAGAATTAATT | + |
Preference number: 5 (lower is better) Translates to: AVGLSCVLCPNLCLQ*CIISVECMESAELI Trigger: AATTAATTCTGCAGATTCCATGCATTCTACAGAAATTATGCAGCACTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAGCCCGACGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGTTTTGCTACAACTGCTaGGGACAGTTTCTCTCCCTT | + |
Preference number: 5 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQFCYNC*GQFLSL Trigger: AAGGGAGAGAAACTGTCCCAAGCAGTTGTAGCAAAA...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTCACAGACCAACAGTCTaGCTGTCCTTCTCAAAAGCC | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSHRPTV*LSFSKA Trigger: GGCTTTTGAGAAGGACAGCAAGACTGTTGGTCTGTG...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS GCA 90 bp | GTCGGGCTTTCTTGTGTCCTGTGCCCTAACCTTTGTTTGCAGTGCTaGATAATTTCTGTAGAATGCATGGAATCTGCAGAATTAATTCCA | + |
Preference number: 5 (lower is better) Translates to: VGLSCVLCPNLCLQC*IISVECMESAELIP Trigger: TGGAATTAATTCTGCAGATTCCATGCATTCTACAGAAATTATGCAGCACTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAGCCCGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGGACAGCAGACGTCCTTaGTACATCCACTTCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKDSRRP*YIHFCS Trigger: ACTGCAGAAGTGGATGTACAAAGGACGTCTGCTGTC...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAACTCTGTTGTTGTGGGTaGAAGCCTCTTGCCTCTGGT | + |
Preference number: 5 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKLCCCG*KPLASG Trigger: ACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAG...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTCCGCTCCGGCTGTTTaGCTATACTGTCTACTTTCT | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSSAPAV*LYCLLS Trigger: AGAAAGTAGACAGTATAGCAAAACAGCCGGAGCGGA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GCAAGGTTTATTAAACTATCCCCCAAGGTCTGGTTACCTTTATGCCCAGAACAGAGCTCACGTTCCAGATaGCCAATCAAAGTATCAATG | + |
Preference number: 5 (lower is better) Translates to: ARFIKLSPKVWLPLCPEQSSRSR*PIKVSM Trigger: CATTGATACTTTGATTGGCAATCTGGAACGTGAGCT...CTGTTCTGGGCATAAAGGTAACCAGACCTTGGGGGATAGTTTAATAAACCTTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAGTGAAGACTCTGTTGTaGTGGGTTGAAGCCTCTTGC | + |
Preference number: 5 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKVKTLL*WVEASC Trigger: GCAAGAGGCTTCAACCCACAACAACAGAGTCTTCAC...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATCGGTGAAGACTCTGTaGTTGTGGGTTGAAGCCTCT | + |
Preference number: 5 (lower is better) Translates to: LQHKIQLSTGETVSTKQKSVKTL*LWVEAS Trigger: AGAGGCTTCAACCCACAACAACAGAGTCTTCACCGA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | AACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAACAGAAAGGCAATTGCTTTTTCAATCTCTATGTaGAACGTGTGGTCCATGTCT | + |
Preference number: 5 (lower is better) Translates to: NFPQGRLCLQSKNRKAIAFSISM*NVWSMS Trigger: AGACATGGACCACACGTTCAACATAGAGATTGAAAA...AGCAATTGCCTTTCTGTTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATCCGCTCCGGCTGTTTaGCTATACTGTCTACTTTCT | + |
Preference number: 5 (lower is better) Translates to: LQHKIQLSTGETVSTKQKSAPAV*LYCLLS Trigger: AGAAAGTAGACAGTATAGCAAAACAGCCGGAGCGGA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTAGCTCACGTTCCAGATaGCCAATCAAAGTATCAATG | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSSSRSR*PIKVSM Trigger: CATTGATACTTTGATTGGCAATCTGGAACGTGAGCT...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTCAGCTTGTTTTTGTaGAGCTCACGTTCCAGATTG | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSFSLFL*SSRSRL Trigger: CAATCTGGAACGTGAGCTCAACAAAAACAAGCTGAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAGCTGAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTTTTTCAATCTCTATGTaGAACGTGTGGTCCATGTCT | + |
Preference number: 5 (lower is better) Translates to: EAERLQHKIQLSTGETVSFSISM*NVWSMS Trigger: AGACATGGACCACACGTTCAACATAGAGATTGAAAA...AGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTCAGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGTTCAGCTTGTTTTTGTaGAGCTCACGTTCCAGATTG | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKFSLFL*SSRSRL Trigger: CAATCTGGAACGTGAGCTCAACAAAAACAAGCTGAA...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | GAAAGACTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGATGTTCAGCTTGTTTTaGTTGAGCTCACGTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: ERLQHKIQLSTGETVSTKMFSLF*LSSRSR Trigger: TCTGGAACGTGAGCTCAACAAAAACAAGCTGAACAT...CTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAGTCTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAAATGTTCAGCTTGTTTTaGTTGAGCTCACGTTCCAGA | + |
Preference number: 5 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKMFSLF*LSSRSR Trigger: TCTGGAACGTGAGCTCAACAAAAACAAGCTGAACAT...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAAACACTCATGTTCAGCTaGTTTTTGTTGAGCTCACGT | + |
Preference number: 5 (lower is better) Translates to: LQHKIQLSTGETVSTKQKTLMFS*FLLSSR Trigger: ACGTGAGCTCAACAAAAACAAGCTGAACATGAGTGT...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CATGGTGTACACCTGCATCACCTCTGGTTACATTTGTTACACAATGTTTTAAAATTTCTCTACAACTTTTaGAATGTCGACTCCGAACAT | + |
Preference number: 5 (lower is better) Translates to: HGVHLHHLWLHLLHNVLKFLYNF*NVDSEH Trigger: ATGTTCGGAGTCGACATTCAAAAAGTTGTAGAGAAA...TTTTAAAACATTGTGTAACAAATGTAACCAGAGGTGATGCAGGTGTACACCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS-3UTR CAA 90 bp | CTTCAACATAAAATACAACTTTCCACAGGGGAGACTGTGTCTACAAAGCAAAAATTTCTCTACAACTTTTaGAATGTCGACTCCGAACAT | + |
Preference number: 5 (lower is better) Translates to: LQHKIQLSTGETVSTKQKFLYNF*NVDSEH Trigger: ATGTTCGGAGTCGACATTCAAAAAGTTGTAGAGAAA...TTTTTGCTTTGTAGACACAGTCTCCCCTGTGGAAAGTTGTATTTTATGTTGAAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS GCA 72 bp | CTCGACTCCGTCGGAGGCGACCGGGGCGGGGACACCTaGTGCGGAGGGCGGTCGCCGCCTCGGAGGCTGCAG | + |
Preference number: 6 (lower is better) Translates to: LDSVGGDRGGDT*CGGRSPPRRLQ Trigger: CTGCAGCCTCCGAGGCGGCGACCGCCCTCCGCAGCAGGTGTCCCCGCCCCGGTCGCCTCCGACGGAGTCGAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 72 bp | GCACCGCACCTGATGCAGCTGTCGCTCGCCCACCGCTaGAGCAGAGGCGGCCGCCGGCTCACGCGGAGGCTC | + |
Preference number: 6 (lower is better) Translates to: APHLMQLSLAHR*SRGGRRLTRRL Trigger: GAGCCTCCGCGTGAGCCGGCGGCCGCCTCTGCTCCAGCGGTGGGCGAGCGACAGCTGCATCAGGTGCGGTGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 72 bp | CCCGGGCTCCAGCCGTCCATCCCACCTCCACGTGGCTaGGGCTCGTCCCTGTCCCGGTGCGCACCGCACCTG | + |
Preference number: 6 (lower is better) Translates to: PGLQPSIPPPRG*GSSLSRCAPHL Trigger: CAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGCCACGTGGAGGTGGGATGGACGGCTGGAGCCCGGG 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS TCA 72 bp | GCTGGGGCTCGTCCCTGTCCCGGTGCGCACCGCACCTaGTGCAGCTGTCGCTCGCCCACCGCTGGAGCAGAG | + |
Preference number: 6 (lower is better) Translates to: AGARPCPGAHRT*CSCRSPTAGAE Trigger: CTCTGCTCCAGCGGTGGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS GCA 72 bp | CCACCTCCACGTGGCTGGGGCTCGTCCCTGTCCCGGTaGGCACCGCACCTGATGCAGCTGTCGCTCGCCCAC | + |
Preference number: 6 (lower is better) Translates to: PPPRGWGSSLSR*APHLMQLSLAH Trigger: GTGGGCGAGCGACAGCTGCATCAGGTGCGGTGCGCACCGGGACAGGGACGAGCCCCAGCCACGTGGAGGTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CAA 90 bp | CCGCCGGCTCACGCGGAGGCTCTCGAGACTTCTGCAACTGGACAGTaGTATCCGAGGACTGGGAGGCCGTCCCTCTCTCGACTCCGTCGG | + |
Preference number: 6 (lower is better) Translates to: PPAHAEALETSATGQ*YPRTGRPSLSRLRR Trigger: CCGACGGAGTCGAGAGAGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCCGCGTGAGCCGGCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 72 bp | TCCTTAAAGGGTCGTCCCGAGGACCCGCTGGGGTCATaGCAGATGGGAGGCAGGAGAGCGGCGGACGTAGCA | + |
Preference number: 6 (lower is better) Translates to: SLKGRPEDPLGS*QMGGRRAADVA Trigger: TGCTACGTCCGCCGCTCTCCTGCCTCCCATCTGCCATGACCCCAGCGGGTCCTCGGGACGACCCTTTAAGGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | CCCGCCGCGTGCCCGAGTCAGGGGGTAGGTCGTGCATaGCCTGGATCAGCAGATAATAGGCCTCTCGCAACT | + |
Preference number: 6 (lower is better) Translates to: PAACPSQGVGRA*PGSADNRPLAT Trigger: AGTTGCGAGAGGCCTATTATCTGCTGATCCAGGCCATGCACGACCTACCCCCTGACTCGGGCACGCGGCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CCA 72 bp | GCCGGCTCACGCGGAGGCTCTCGAGACTTCTGCAACTaGACAGTTGTATCCGAGGACTGGGAGGCCGTCCCT | + |
Preference number: 6 (lower is better) Translates to: AGSRGGSRDFCN*TVVSEDWEAVP Trigger: AGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCCGCGTGAGCCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS GCA 72 bp | ATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTTGGGTaGTGTCCCGCGATCGCGACCCTTCATCCCCAGGGA | + |
Preference number: 6 (lower is better) Translates to: IWRGCLRSGNFG*CPAIATLHPQG Trigger: TCCCTGGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | GTCACCGCAGGTGGCTTGAGGGGAAGATCCTCCGGATaGTCCTCTTGGCTGCTGGATATCACAGAGGTCCCC | + |
Preference number: 6 (lower is better) Translates to: VTAGGLRGRSSG*SSWLLDITEVP Trigger: GGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | CACGCGGAGGCTCTCGAGACTTCTGCAACTGGACAGTaGTATCCGAGGACTGGGAGGCCGTCCCTCTCTCGA | + |
Preference number: 6 (lower is better) Translates to: HAEALETSATGQ*YPRTGRPSLSR Trigger: TCGAGAGAGGGACGGCCTCCCAGTCCTCGGATACAACTGTCCAGTTGCAGAAGTCTCGAGAGCCTCCGCGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039517.11 |
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CDS CAA 72 bp | CCCAAATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTaGGGTGCTGTCCCGCGATCGCGACCCTTCATCCCC | + |
Preference number: 6 (lower is better) Translates to: PKFGEVVCAPGT*GAVPRSRPFIP Trigger: GGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | TTCCAACTGCCCAAATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTaGGGTGCTGTCCCGCGATCGCGACCCTTCATCCCCAGGGACAGC | + |
Preference number: 6 (lower is better) Translates to: FQLPKFGEVVCAPGT*GAVPRSRPFIPRDS Trigger: GCTGTCCCTGGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | AGCACACGCGGTTCCTCCTCGGCGTGGGCTCCCAGCTaGACACCACCAGCTTCAGATGCTGCGCATTTTCAA | + |
Preference number: 6 (lower is better) Translates to: STRGSSSAWAPS*TPPASDAAHFQ Trigger: TTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCACGCCGAGGAGGAACCGCGTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | TCTCAACGTCCGGCAGGCAATCCAGGAGGTCCACAGTaGGCCTGGAGTCACTGGGCTCGTTCTCACAACCAC | + |
Preference number: 6 (lower is better) Translates to: SQRPAGNPGGPQ*AWSHWARSHNH Trigger: GTGGTTGTGAGAACGAGCCCAGTGACTCCAGGCTCACTGTGGACCTCCTGGATTGCCTGCCGGACGTTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | GTAGCCCTGGCAGCATTACACACCGCATGTGTGCAGTaGGGCCTGTGGGATACCCAATGCTTGGGTGGAGAC | + |
Preference number: 6 (lower is better) Translates to: VALAALHTACVQ*GLWDTQCLGGD Trigger: GTCTCCACCCAAGCATTGGGTATCCCACAGGCCGCACTGCACACATGCGGTGTGTAATGCTGCCAGGGCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | GGTGGCTTGAGGGGAAGATCCTCCGGATGGTCCTCTTaGCTGCTGGATATCACAGAGGTCCCCACAGGATCC | + |
Preference number: 6 (lower is better) Translates to: GGLRGRSSGWSS*LLDITEVPTGS Trigger: GGATCCTGTGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | CCAAATTTGGAGAGGTTGTCTGCGCTCCGGGAACTTTaGGTGCTGTCCCGCGATCGCGACCCTTCATCCCCA | + |
Preference number: 6 (lower is better) Translates to: PNLERLSALREL*VLSRDRDPSSP Trigger: TGGGGATGAAGGGTCGCGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | AGTCACCGCAGGTGGCTTGAGGGGAAGATCCTCCGGATGGTCCTCTaGGCTGCTGGATATCACAGAGGTCCCCACAGGATCCTTAAAGGG | + |
Preference number: 6 (lower is better) Translates to: SHRRWLEGKILRMVL*AAGYHRGPHRILKG Trigger: CCCTTTAAGGATCCTGTGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | GAGGCTCCGCCTTCATCAGATCTCTGGCAGACAACATaGTCACAGGAAGCTTCAGGGCGGCGGTGTTTGCCT | + |
Preference number: 6 (lower is better) Translates to: EAPPSSDLWQTT*SQEASGRRCLP Trigger: AGGCAAACACCGCCGCCCTGAAGCTTCCTGTGAGCATGTTGTCTGCCAGAGATCTGATGAAGGCGGAGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | AGGTGGCTTGAGGGGAAGATCCTCCGGATGGTCCTCTaGGCTGCTGGATATCACAGAGGTCCCCACAGGATC | + |
Preference number: 6 (lower is better) Translates to: RWLEGKILRMVL*AAGYHRGPHRI Trigger: GATCCTGTGGGGACCTCTGTGATATCCAGCAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | CCCAGGGACAGCAGACGTCCTTTGTACATCCACTTCTGCAGTTTCTaGACAGTCACCGCAGGTGGCTTGAGGGGAAGATCCTCCGGATGG | + |
Preference number: 6 (lower is better) Translates to: PRDSRRPLYIHFCSF*TVTAGGLRGRSSGW Trigger: CCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGTGGATGTACAAAGGACGTCTGCTGTCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | TGCACTTTCCAACTGCCCAAATTTGGAGAGGTTGTCTaGGCTCCGGGAACTTTGGGTGCTGTCCCGCGATCG | + |
Preference number: 6 (lower is better) Translates to: CTFQLPKFGEVV*APGTLGAVPRS Trigger: CGATCGCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGAAAGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | CACTTCTGCAGTTTCTTGACAGTCACCGCAGGTGGCTaGAGGGGAAGATCCTCCGGATGGTCCTCTTGGCTG | + |
Preference number: 6 (lower is better) Translates to: HFCSFLTVTAGG*RGRSSGWSSWL Trigger: CAGCCAAGAGGACCATCCGGAGGATCTTCCCCTCAAGCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | CTCTGGCAGACAACATGCTCACAGGAAGCTTCAGGGCGGCGGTGTTaGCCTCCTCAAGACTCAAGACGTGTGCTATGCCCAAGCTGTCAT | + |
Preference number: 6 (lower is better) Translates to: LWQTTCSQEASGRRC*PPQDSRRVLCPSCH Trigger: ATGACAGCTTGGGCATAGCACACGTCTTGAGTCTTGAGGAGGCAAACACCGCCGCCCTGAAGCTTCCTGTGAGCATGTTGTCTGCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | CGATCCATGCTTGCTAGATCTAGTTCTCAGTTCGGGTaGGTCTCCGTCGCTGAGGTACCCACCCTTGCAGGA | + |
Preference number: 6 (lower is better) Translates to: RSMLARSSSQFG*VSVAEVPTLAG Trigger: TCCTGCAAGGGTGGGTACCTCAGCGACGGAGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CAACATGCTCACAGGAAGCTTCAGGGCGGCGGTGTTTaGCTCCTCAAGACTCAAGACGTGTGCTATGCCCAA | + |
Preference number: 6 (lower is better) Translates to: QHAHRKLQGGGV*LLKTQDVCYAQ Trigger: TTGGGCATAGCACACGTCTTGAGTCTTGAGGAGGCAAACACCGCCGCCCTGAAGCTTCCTGTGAGCATGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | GGGGTTTCTTCCGGTAGCTGTGCCGAGAGGATACGGTaGTATCAAGATGGTACCGGCTTATCACGTTCCTGG | + |
Preference number: 6 (lower is better) Translates to: GVSSGSCAERIR*YQDGTGLSRSW Trigger: CCAGGAACGTGATAAGCCGGTACCATCTTGATACCACCGTATCCTCTCGGCACAGCTACCGGAAGAAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CGGTGTTTGCCTCCTCAAGACTCAAGACGTGTGCTATaGCCAAGCTGTCATCCTCAGGGATGGGATTGTACC | + |
Preference number: 6 (lower is better) Translates to: RCLPPQDSRRVL*PSCHPQGWDCT Trigger: GGTACAATCCCATCCCTGAGGATGACAGCTTGGGCATAGCACACGTCTTGAGTCTTGAGGAGGCAAACACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | GGCGTGGGCTCCCAGCTGAACACCACCAGCTTCAGATaGTGCGCATTTTCAATCTCTATGTTGAACGTGTGG | + |
Preference number: 6 (lower is better) Translates to: GVGSQLNTTSFR*CAFSISMLNVW Trigger: CCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCACGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | TCGCGACCCTTCATCCCCAGGGACAGCAGACGTCCTTaGTACATCCACTTCTGCAGTTTCTTGACAGTCACC | + |
Preference number: 6 (lower is better) Translates to: SRPFIPRDSRRP*YIHFCSFLTVT Trigger: GGTGACTGTCAAGAAACTGCAGAAGTGGATGTACAAAGGACGTCTGCTGTCCCTGGGGATGAAGGGTCGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | TTTCATGCACTTTCCAACTGCCCAAATTTGGAGAGGTaGTCTGCGCTCCGGGAACTTTGGGTGCTGTCCCGC | + |
Preference number: 6 (lower is better) Translates to: FHALSNCPNLER*SALRELWVLSR Trigger: GCGGGACAGCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGAAAGTGCATGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | GGGACAGTTTCTCTCCCTTTCCCAAGTTTGTGCTCCGATCCATGCTaGCTAGATCTAGTTCTCAGTTCGGGTGAGTCTCCGTCGCTGAGG | + |
Preference number: 6 (lower is better) Translates to: GTVSLPFPSLCSDPC*LDLVLSSGESPSLR Trigger: CCTCAGCGACGGAGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGGGAGAGAAACTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | GTGGGCTCCCAGCTGAACACCACCAGCTTCAGATGCTaGGCATTTTCAATCTCTATGTTGAACGTGTGGTCC | + |
Preference number: 6 (lower is better) Translates to: VGSQLNTTSFRC*AFSISMLNVWS Trigger: GGACCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCTGAAGCTGGTGGTGTTCAGCTGGGAGCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CACCAGTTTCAGATGATCCAACAACATCTTCAGGGTTaGCTTCTCAACGTCCGGCAGGCAATCCAGGAGGTC | + |
Preference number: 6 (lower is better) Translates to: HQFQMIQQHLQG*LLNVRQAIQEV Trigger: GACCTCCTGGATTGCCTGCCGGACGTTGAGAAGGCAACCCTGAAGATGTTGTTGGATCATCTGAAACTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | GACGTGGTTTTCATGCACTTTCCAACTGCCCAAATTTaGAGAGGTTGTCTGCGCTCCGGGAACTTTGGGTGC | + |
Preference number: 6 (lower is better) Translates to: DVVFMHFPTAQI*RGCLRSGNFGC Trigger: GCACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGAAAGTGCATGAAAACCACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | AGCAGACGTCCTTTGTACATCCACTTCTGCAGTTTCTaGACAGTCACCGCAGGTGGCTTGAGGGGAAGATCC | + |
Preference number: 6 (lower is better) Translates to: SRRPLYIHFCSF*TVTAGGLRGRS Trigger: GGATCTTCCCCTCAAGCCACCTGCGGTGACTGTCAAGAAACTGCAGAAGTGGATGTACAAAGGACGTCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | GGACGTGGTTTTCATGCACTTTCCAACTGCCCAAATTaGGAGAGGTTGTCTGCGCTCCGGGAACTTTGGGTG | + |
Preference number: 6 (lower is better) Translates to: GRGFHALSNCPN*ERLSALRELWV Trigger: CACCCAAAGTTCCCGGAGCGCAGACAACCTCTCCAAATTTGGGCAGTTGGAAAGTGCATGAAAACCACGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | GACATGGGGATTCGTTGTGCGGTCATGACTTCCGCTCCGGCTGTTTaGCTATACTGTCTACTTTCTCCACCTTCTAAGGGGCCGTCATCA | + |
Preference number: 6 (lower is better) Translates to: DMGIRCAVMTSAPAV*LYCLLSPPSKGPSS Trigger: TGATGACGGCCCCTTAGAAGGTGGAGAAAGTAGACAGTATAGCAAAACAGCCGGAGCGGAAGTCATGACCGCACAACGAATCCCCATGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | CCGACAGGTGAGCAGGGCCGTTCTGGCTTTGTTCACTaGGTCTACCTGAATGGCACAAAACACATCTTTCGA | + |
Preference number: 6 (lower is better) Translates to: PTGEQGRSGFVH*VYLNGTKHIFR Trigger: TCGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAACAAAGCCAGAACGGCCCTGCTCACCTGTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | TTCGCTTGCTCTCGTCCAGACTCTGAGACCTCAGGGTaGTCTGATACAGCCAATTGCGCTTCTTTGAAACTG | + |
Preference number: 6 (lower is better) Translates to: FACSRPDSETSG*SDTANCASLKL Trigger: CAGTTTCAAAGAAGCGCAATTGGCTGTATCAGAGCACCCTGAGGTCTCAGAGTCTGGACGAGAGCAAGCGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CTCTTCGCCATGGCATCCAACACAGCCTCATACAGCTaGTTGGTTATTAGGGGAGAAGGGAGTTCTCTCAAG | + |
Preference number: 6 (lower is better) Translates to: LFAMASNTASYS*LVIRGEGSSLK Trigger: CTTGAGAGAACTCCCTTCTCCCCTAATAACCAAGCAGCTGTATGAGGCTGTGTTGGATGCCATGGCGAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | GGGCCGTTCTGGCTTTGTTCACTGAGTCTACCTGAATaGCACAAAACACATCTTTCGAATCTATCCGGGGCG | + |
Preference number: 6 (lower is better) Translates to: GPFWLCSLSLPE*HKTHLSNLSGA Trigger: CGCCCCGGATAGATTCGAAAGATGTGTTTTGTGCCATTCAGGTAGACTCAGTGAACAAAGCCAGAACGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | TCTCTCCCTTTCCCAAGTTTGTGCTCCGATCCATGCTaGCTAGATCTAGTTCTCAGTTCGGGTGAGTCTCCG | + |
Preference number: 6 (lower is better) Translates to: SLPFPSLCSDPC*LDLVLSSGESP Trigger: CGGAGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | GCTCATGAGGCCGGATATGTACTGCGAGCATTTGGGTaGATCCGCAAAGCTGTAATGTCTGAAGGCACCGAT | + |
Preference number: 6 (lower is better) Translates to: AHEAGYVLRAFG*IRKAVMSEGTD Trigger: ATCGGTGCCTTCAGACATTACAGCTTTGCGGATCAACCCAAATGCTCGCAGTACATATCCGGCCTCATGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | TCAGGGATGGGATTGTACCATATTTCTCCTTCATCGTCCGCATCATaGTCCTCGCTAAAGGCTGAAGAGCCGTTTCTGGACAACGTAGCC | + |
Preference number: 6 (lower is better) Translates to: SGMGLYHISPSSSAS*SSLKAEEPFLDNVA Trigger: GGCTACGTTGTCCAGAAACGGCTCTTCAGCCTTTAGCGAGGACAATGATGCGGACGATGAAGGAGAAATATGGTACAATCCCATCCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | CCTCAGGGTGCTCTGATACAGCCAATTGCGCTTCTTTaGAACTGTGATGTTGTTAAGGGGCTGGTGACCTCT | + |
Preference number: 6 (lower is better) Translates to: PQGALIQPIALL*NCDVVKGLVTS Trigger: AGAGGTCACCAGCCCCTTAACAACATCACAGTTTCAAAGAAGCGCAATTGGCTGTATCAGAGCACCCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | GCCGCTGAACCACACAATCGATACAGGCCTACAACCTaGCAACCCCTCTTTTCAATCTCCACGATGCATTTC | + |
Preference number: 6 (lower is better) Translates to: AAEPHNRYRPTT*QPLFSISTMHF Trigger: GAAATGCATCGTGGAGATTGAAAAGAGGGGTTGTCAGGTTGTAGGCCTGTATCGATTGTGTGGTTCAGCGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | CTCTTCAGAATCGGTGAAGACTCTGTTGTTGTGGGTTaGAGCCTCTTGCCTCTGGTTAAGCAACACTGGTCC | + |
Preference number: 6 (lower is better) Translates to: LFRIGEDSVVVG*SLLPLVKQHWS Trigger: GGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTTCACCGATTCTGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | TCGGTGAAGACTCTGTTGTTGTGGGTTGAAGCCTCTTaGCTCTGGTTAAGCAACACTGGTCCAAAGCACACA | + |
Preference number: 6 (lower is better) Translates to: SVKTLLLWVEAS*LWLSNTGPKHT Trigger: TGTGTGCTTTGGACCAGTGTTGCTTAACCAGAGGCAAGAGGCTTCAACCCACAACAACAGAGTCTTCACCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | TCGCCATGGCATCCAACACAGCCTCATACAGCTGCTTaGTTATTAGGGGAGAAGGGAGTTCTCTCAAGTAGT | + |
Preference number: 6 (lower is better) Translates to: SPWHPTQPHTAA*LLGEKGVLSSS Trigger: ACTACTTGAGAGAACTCCCTTCTCCCCTAATAACCAAGCAGCTGTATGAGGCTGTGTTGGATGCCATGGCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | ATTCGTTGTGCGGTCATGACTTCCGCTCCGGCTGTTTaGCTATACTGTCTACTTTCTCCACCTTCTAAGGGG | + |
Preference number: 6 (lower is better) Translates to: IRCAVMTSAPAV*LYCLLSPPSKG Trigger: CCCCTTAGAAGGTGGAGAAAGTAGACAGTATAGCAAAACAGCCGGAGCGGAAGTCATGACCGCACAACGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | CAGCAGCGGCACCATCAAGCCTACGTTTTCTTTCTCTACAACTTTTaGAATGTCGACTCCGAACATCACCGCTTCGCGGTTCTTATCCAG | + |
Preference number: 6 (lower is better) Translates to: QQRHHQAYVFFLYNF*NVDSEHHRFAVLIQ Trigger: CTGGATAAGAACCGCGAAGCGGTGATGTTCGGAGTCGACATTCAAAAAGTTGTAGAGAAAGAAAACGTAGGCTTGATGGTGCCGCTGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | GTTTCTCTCCCTTTCCCAAGTTTGTGCTCCGATCCATaGTTGCTAGATCTAGTTCTCAGTTCGGGTGAGTCT | + |
Preference number: 6 (lower is better) Translates to: VSLPFPSLCSDP*LLDLVLSSGES Trigger: AGACTCACCCGAACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGGGAGAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CTGCTTGGGACAGTTTCTCTCCCTTTCCCAAGTTTGTaGTCCGATCCATGCTTGCTAGATCTAGTTCTCAGT | + |
Preference number: 6 (lower is better) Translates to: LLGTVSLPFPSL*SDPCLLDLVLS Trigger: ACTGAGAACTAGATCTAGCAAGCATGGATCGGAGCACAAACTTGGGAAAGGGAGAGAAACTGTCCCAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS GCA 72 bp | CTACAACCTGACAACCCCTCTTTTCAATCTCCACGATaGATTTCTGTATCAGCAGCGGCACCATCAAGCCTA | + |
Preference number: 6 (lower is better) Translates to: LQPDNPSFQSPR*ISVSAAAPSSL Trigger: TAGGCTTGATGGTGCCGCTGCTGATACAGAAATGCATCGTGGAGATTGAAAAGAGGGGTTGTCAGGTTGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | AGATGCTGCGCATTTTCAATCTCTATGTTGAACGTGTaGTCCATGTCTAAGAAGGTCGTCCGACAGGTGAGC | + |
Preference number: 6 (lower is better) Translates to: RCCAFSISMLNV*SMSKKVVRQVS Trigger: GCTCACCTGTCGGACGACCTTCTTAGACATGGACCACACGTTCAACATAGAGATTGAAAATGCGCAGCATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CCA 72 bp | AACCACTGGACGACATTTTCAAAGGACTCTTCGCCATaGCATCCAACACAGCCTCATACAGCTGCTTGGTTA | + |
Preference number: 6 (lower is better) Translates to: NHWTTFSKDSSP*HPTQPHTAAWL Trigger: TAACCAAGCAGCTGTATGAGGCTGTGTTGGATGCCATGGCGAAGAGTCCTTTGAAAATGTCGTCCAGTGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | GGATTGTACCATATTTCTCCTTCATCGTCCGCATCATaGTCCTCGCTAAAGGCTGAAGAGCCGTTTCTGGAC | + |
Preference number: 6 (lower is better) Translates to: GLYHISPSSSAS*SSLKAEEPFLD Trigger: GTCCAGAAACGGCTCTTCAGCCTTTAGCGAGGACAATGATGCGGACGATGAAGGAGAAATATGGTACAATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | TCCTCTGCCGTCGGGCTTTCTTGTGTCCTGTGCCCTAACCTTTGTTaGCAGTGCTGCATAATTTCTGTAGAATGCATGGAATCTGCAGAA | + |
Preference number: 6 (lower is better) Translates to: SSAVGLSCVLCPNLC*QCCIISVECMESAE Trigger: TTCTGCAGATTCCATGCATTCTACAGAAATTATGCAGCACTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAGCCCGACGGCAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | GAGAGCCATAGACATTCTCAAATAAGTCTGTCAGTGTaGTTCTTTGGTCCGTTGTCACCGAGAGGACGTGGT | + |
Preference number: 6 (lower is better) Translates to: ESHRHSQISLSV*FFGPLSPRGRG Trigger: ACCACGTCCTCTCGGTGACAACGGACCAAAGAATCACACTGACAGACTTATTTGAGAATGTCTATGGCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 |
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CDS TCA 72 bp | GTTTTAAACCCTCAGCTCCATAGAAGTGTACGCTCATaGGGCCGGATATGTACTGCGAGCATTTGGGTTGAT | + |
Preference number: 6 (lower is better) Translates to: VLNPQLHRSVRS*GRICTASIWVD Trigger: ATCAACCCAAATGCTCGCAGTACATATCCGGCCTCATGAGCGTACACTTCTATGGAGCTGAGGGTTTAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | AGCCATAGACATTCTCAAATAAGTCTGCTGTCAGTGTaGTTCTTTGGTCCGTTGTCACCGAGAGGACGTGGT | + |
Preference number: 6 (lower is better) Translates to: SHRHSQISLLSV*FFGPLSPRGRG Trigger: ACCACGTCCTCTCGGTGACAACGGACCAAAGAATCACACTGACAGCAGACTTATTTGAGAATGTCTATGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212479.2 |
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CDS CCA 72 bp | AGTGTGATTCTTTGGTCCGTTGTCACCGAGAGGACGTaGTTTTCATGCACTTTCCAACTGCCCAAATTTGGA | + |
Preference number: 6 (lower is better) Translates to: SVILWSVVTERT*FSCTFQLPKFG Trigger: TCCAAATTTGGGCAGTTGGAAAGTGCATGAAAACCACGTCCTCTCGGTGACAACGGACCAAAGAATCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS TCA 72 bp | TCAATGCTCTCTTGCAAATCTCTGAGGTTAGCTTTCTaGTCCACCGTGGATTCAATGGTCTGTACCGTCAAG | + |
Preference number: 6 (lower is better) Translates to: SMLSCKSLRLAF*STVDSMVCTVK Trigger: CTTGACGGTACAGACCATTGAATCCACGGTGGATCAGAAAGCTAACCTCAGAGATTTGCAAGAGAGCATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 72 bp | GTCGGGCTTTCTTGTGTCCTGTGCCCTAACCTTTGTTaGCAGTGCTGCATAATTTCTGTAGAATGCATGGAA | + |
Preference number: 6 (lower is better) Translates to: VGLSCVLCPNLC*QCCIISVECME Trigger: TTCCATGCATTCTACAGAAATTATGCAGCACTGCAAACAAAGGTTAGGGCACAGGACACAAGAAAGCCCGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |
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CDS CAA 90 bp | GTTGAGCTCACGTTCCAGATTGCCAATCAAAGTATCAATGCTCTCTaGCAAATCTCTGAGGTTAGCTTTCTGATCCACCGTGGATTCAAT | + |
Preference number: 6 (lower is better) Translates to: VELTFQIANQSINAL*QISEVSFLIHRGFN Trigger: ATTGAATCCACGGTGGATCAGAAAGCTAACCTCAGAGATTTGCAAGAGAGCATTGATACTTTGATTGGCAATCTGGAACGTGAGCTCAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039517.11 ENSMUST00000200546.2 ENSMUST00000212479.2 |