Pregenerated sensors for SYDE1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032714Ensembl transcript IDs: ENSMUST00000040580.7
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGAAGGGCTGCTGGGGAAAGGAAAGGTCTGACTCTGTCTCCATTTaGTGGTTGGAAATTCATCTCGGAGTTTTTGCTAGAAGAGAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GKGCWGKERSDSVSI*WLEIHLGVFARREG Trigger: ACCCTCTCTTCTAGCAAAAACTCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCCCCAGCAGCCCTTCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | CCAATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGGGAAGGCTGGCCCCTTaGCAACTCCCTAGCAACCAG | + |
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Preference number: 2 (lower is better) Translates to: PMLGRGAMASVLKMPRAWGRLAP*QLPSNQ Trigger: CTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC...CCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACAGGGCCTTAGTAACTTaGAACCCAGTCACCAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNRALVT*NPVTSN Trigger: ATTACTGGTGACTGGGTTCCAAGTTACTAAGGCCCT...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTGATGCTCACAGTAATTGGTGTTCCCCTGCAAAGGGGAGGCAAGAGAGGCCAGTAATCAGAACCTaGTCCTTAGCAACCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: QGDAHSNWCSPAKGRQERPVIRT*SLATRK Trigger: CTTCCTGGTTGCTAAGGACCAGGTTCTGATTACTGG...CCTCTCTTGCCTCCCCTTTGCAGGGGAACACCAATTACTGTGAGCATCACCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR TCA 90 bp | TATCCCACTCTATGGTCCCTGAAAGAGTTCCACATATCCATTCCACACAGGCCAGGGAAAGGAAAGGTCTaGCTCTGTCTCCATTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: YPTLWSLKEFHISIPHRPGKGKV*LCLHLL Trigger: CAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCCC...TGGCCTGTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | GGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTGGTGTCAGTCTGAGCAACTCTaGTCAGGTCCTTTTAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: GLTRDVLTPQGDAHSNWCQSEQL*SGPFRS Trigger: TGACCTAAAAGGACCTGACCAGAGTTGCTCAGACTG...ACACCAATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATAAGCAGAACTGTTTCTaGCAGCAAGAGAAGCCCCAA | + |
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Preference number: 2 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNKQNCF*QQEKPQ Trigger: TTGGGGCTTCTCTTGCTGCCAGAAACAGTTCTGCTT...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAATGCTAATACTGGTTTaGTTGGCAGCAGCAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: GKERSDSVSICWLEIHLGMLILV*LAAARG Trigger: CCCTCTTGCTGCTGCCAACCAAACCAGTATTAGCAT...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR CAA 90 bp | CTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAGTTTTaGCTAGAAGAGAGGGTTAGGGGAAATCACCTGTTTCTCTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: LTLSPFAGWKFISEF*LEERVRGNHLFLSK Trigger: CTTAGAGAGAAACAGGTGATTTCCCCTAACCCTCTCTTCTAGCAAAAACTCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATTCTCCATTTGCTGGTTaGAAATTCATCTCGGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: ARQWKILSHSMVPERVPHSPFAG*KFISEF Trigger: AAACTCCGAGATGAATTTCCAACCAGCAAATGGAGA...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR CCA 72 bp | GGCAAGAGAGGCCAGCCTAGCAAGCAGAACTGTTTCTaGCAGCAAGAGAAGCCCCAATGCTCGGGAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: GKRGQPSKQNCF*QQEKPQCSGEG Trigger: CCCCTCTCCCGAGCATTGGGGCTTCTCTTGCTGCCAGAAACAGTTCTGCTTGCTAGGCTGGCCTCTCTTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR CCA 72 bp | GGGGTGCCAGGCAATGGAAAATCCTATCCCACTCTATaGTCCCTGAAAGAGTTCCACATATCCATTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: GVPGNGKSYPTL*SLKEFHISIPH Trigger: GTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGCACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR TCA 72 bp | CAGAGTCTGGTGCTGTTTCCCTTAAGTAGAATCCCATaGTTGCCTTTAGATACTTCAAGGGAGGGAGAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QSLVLFPLSRIP*LPLDTSREGER Trigger: TCTCTCTCCCTCCCTTGAAGTATCTAAAGGCAATCATGGGATTCTACTTAAGGGAAACAGCACCAGACTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR GCA 72 bp | TGCTGGGGAAAGGAAAGGTCTGACTCTGTCTCCATTTaGTGGTTGGAAATTCATCTCGGAGTTTTTGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: CWGKERSDSVSI*WLEIHLGVFAR Trigger: TCTAGCAAAAACTCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCCCCAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACTGGGGGTTTGGGCTCTaGGCGCTGGGCTGGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNWGFGL*ALGWVA Trigger: GGCCACCCAGCCCAGCGCTCAGAGCCCAAACCCCCA...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACTGGTCCGCTTCGAAGTaGCCCTGTGCGGGCCCGAGC | + |
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Preference number: 4 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNWSASK*PCAGPS Trigger: GCTCGGGCCCGCACAGGGCCACTTCGAAGCGGACCA...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | CCAATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGCATACAGGTGCAGGCTaGGACGCCCCCAGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PMLGRGAMASVLKMPRAWHTGAG*DAPRGQ Trigger: CTGCCCTCTGGGGGCGTCTCAGCCTGCACCTGTATG...CCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACAGTCCACAGCACTGGTaGCTCCTGGGCCAGAGCTAC | + |
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Preference number: 4 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNSPQHW*LLGQSY Trigger: GTAGCTCTGGCCCAGGAGTCACCAGTGCTGTGGACT...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACCTGCTTGGGTGTCCTTaGGCCATGGCTTCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNLLGCP*AMASST Trigger: GGTGCTGGAAGCCATGGCCCAAGGACACCCAAGCAG...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACTCTGGTCAGCAGGGAAGCCCTGCTTaGGTGTCCTTGGGCCATGGC | + |
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Preference number: 4 (lower is better) Translates to: APWQLPSNQVLSLSNSGQQGSPA*VSLGHG Trigger: GCCATGGCCCAAGGACACCCAAGCAGGGCTTCCCTG...CTGACCAGAGTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | AGTGCTGAAAATGCCAAGAGCCTGGTTTCTGCAGCTAGGGCCCCAAACAATGGCGAGCGCTGGGCTGGGTaGCCGCGGTCCTTGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: SAENAKSLVSAARAPNNGERWAG*PRSLAS Trigger: AGAAGCCAAGGACCGCGGCCACCCAGCCCAGCGCTC...GCCATTGTTTGGGGCCCTAGCTGCAGAAACCAGGCTCTTGGCATTTTCAGCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | CAGGGTGATGCTCACAGTAATTGGTGTTCCCCTGCAAAGGGGAGGCAAGAGAGGCATCTGGCAGGCATCTaGGGAGCCCTCTGGTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: QGDAHSNWCSPAKGRQERHLAGI*GALWCP Trigger: AGGGCACCAGAGGGCTCCTCAGATGCCTGCCAGATG...CCTCTCTTGCCTCCCCTTTGCAGGGGAACACCAATTACTGTGAGCATCACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | CTGCAAAGGGGAGGCAAGAGAGGCCAGCCTAGCAAGCAGAACTGTTTCTGGCAGCCCGCCAGCGGCAAGTaGAGAGGTGGCTGTCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: LQRGGKRGQPSKQNCFWQPASGK*RGGCLL Trigger: CAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGG...CTGCCAGAAACAGTTCTGCTTGCTAGGCTGGCCTCTCTTGCCTCCCCTTTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | TTCCCCTGCAAAGGGGAGGCAAGAGAGGCCAGCCTAGCAAGCAGAACTGTTTCTGCCATCTGGGGTATCTaGGGGCCGTCTGGTATCTGG | + |
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Preference number: 4 (lower is better) Translates to: FPCKGEAREASLASRTVSAIWGI*GPSGIW Trigger: CCAGATACCAGACGGCCCTCAGATACCCCAGATGGC...AGAAACAGTTCTGCTTGCTAGGCTGGCCTCTCTTGCCTCCCCTTTGCAGGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | CCAATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGGCGGCGCCGGAGCTCTaGCAGCTTTTTCATCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: PMLGRGAMASVLKMPRAWAAPEL*QLFHLH Trigger: ATGAAGATGAAAAAGCTGCCAGAGCTCCGGCGCCGC...CCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GTTTGGTTGGCAGCAGCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTCCGAGTCACCACTTCTaGGCCCGCCAGCGGCAAGTG | + |
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Preference number: 4 (lower is better) Translates to: VWLAAARGLTRDVLTPQGPSHHF*ARQRQV Trigger: CACTTGCCGCTGGCGGGCCCAGAAGTGGTGACTCGG...ACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGCTGCTGCCAACCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | CCCACTCTATGGTCCCTGAAAGAGTTCCACATATCCATTCCACACAGGCCAGTGGGCCCTCTCCACATCTaGCAGGCATCTGAGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: PTLWSLKEFHISIPHRPVGPLHI*QASEEP Trigger: GGGCTCCTCAGATGCCTGCCAGATGTGGAGAGGGCC...CACTGGCCTGTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GTAATCAGAACCTGGTCCTTAGCAACCAGGAAGCAATTCCTTAGTAACCAGAGTTGGGCACAGGGCCGGTaGCGCCTCACACCAGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VIRTWSLATRKQFLSNQSWAQGR*RLTPGS Trigger: GGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCCCA...ACTCTGGTTACTAAGGAATTGCTTCCTGGTTGCTAAGGACCAGGTTCTGATTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | CTGCAAAGGGGAGGCAAGAGAGGCCAGCCTAGCAAGCAGAACTGTTTCTGGCAGGCTACCCCATCCACTTaGAGAAGGCAGCAGAGATCT | + |
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Preference number: 4 (lower is better) Translates to: LQRGGKRGQPSKQNCFWQATPST*RRQQRS Trigger: AGATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGC...CTGCCAGAAACAGTTCTGCTTGCTAGGCTGGCCTCTCTTGCCTCCCCTTTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATAATAGCACAGTGCCCTaGGCACAGGGCCGGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ARQWKILSHSMVPERVPHNSTVP*AQGRCR Trigger: GCGGCACCGGCCCTGTGCCCAGGGCACTGTGCTATT...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | TATCCCACTCTATGGTCCCTGAAAGAGTTCCACATATCCATTCCACACAGGCCACCAGCCACTGATGCCTaGCCAGGAGTCCCCACACTG | + |
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Preference number: 4 (lower is better) Translates to: YPTLWSLKEFHISIPHRPPATDA*PGVPTL Trigger: CAGTGTGGGGACTCCTGGGCAGGCATCAGTGGCTGG...TGGCCTGTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | TATCCCACTCTATGGTCCCTGAAAGAGTTCCACATATCCATTCCACACAGGCCACCTAGCCCATACAGGTaGAGGCTGAGACGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YPTLWSLKEFHISIPHRPPSPYR*RLRRPQ Trigger: CTGGGGGCGTCTCAGCCTGCACCTGTATGGGCTAGG...TGGCCTGTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTGGTGTCTGGTTCTGGGGGTTTaGGCTCTGAGCGCTGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GLTRDVLTPQGDAHSNWCLVLGV*ALSAGL Trigger: CAGCCCAGCGCTCAGAGCCCAAACCCCCAGAACCAG...ACACCAATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | TATCCCACTCTATGGTCCCTGAAAGAGTTCCACATATCCATTCCACACAGGCCAGGGCTCAGGTGCGGGTaGTCTGGGGTCTTCTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: YPTLWSLKEFHISIPHRPGLRCG*SGVFFR Trigger: CCTGAAGAAGACCCCAGACCACCCGCACCTGAGCCC...TGGCCTGTGTGGAATGGATATGTGGAACTCTTTCAGGGACCATAGAGTGGGATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | AGTGCTGAAAATGCCAAGAGCCTGGTTTCTGCAGCTAGGGCCCCAAACAATGGCATGCGGTTGTGGGTGTaGAAGGAAGAGACAAGGCGC | + |
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Preference number: 4 (lower is better) Translates to: SAENAKSLVSAARAPNNGMRLWV*KEETRR Trigger: GCGCCTTGTCTCTTCCTTCCACACCCACAACCGCAT...GCCATTGTTTGGGGCCCTAGCTGCAGAAACCAGGCTCTTGGCATTTTCAGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTGGTGTGCTGGGTGGTACCTCTaGTCCAGCCTGAGACCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GLTRDVLTPQGDAHSNWCAGWYL*SSLRPF Trigger: GAAGGGTCTCAGGCTGGAGCAGAGGTACCACCCAGC...ACACCAATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTGGTGTTTGGCAATAGCACAGTaGCCTGGGCACAGGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GLTRDVLTPQGDAHSNWCLAIAQ*PGHRAG Trigger: ACCGGCCCTGTGCCCAGGGCACTGTGCTATTGCCAA...ACACCAATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGACCCATCGGCGGCTACTaGGCTCCAGGCTTTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGPIGGY*APGFAG Trigger: ACCTGCAAAGCCTGGAGCCCAGTAGCCGCCGATGGG...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGATCATTGAGAGGCGCCTaGCAGGGCCTGGGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGSLRGA*QGLGTW Trigger: CCAAGTCCCCAGGCCCTGCCAGGCGCCTCTCAATGA...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAAGGGCCGGAAGGCAGTaGGTGATGGTGGTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGRAGRQ*VMVVLQ Trigger: CTGGAGGACCACCATCACCCACTGCCTTCCGGCCCT...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GTTTGGTTGGCAGCAGCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGGGCTGGGTGATGAGTaGAGTAGGCAGTTCTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: VWLAAARGLTRDVLTPQGGLGDE*SRQFSK Trigger: CTTCGAGAACTGCCTACTCCACTCATCACCCAGCCC...ACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGCTGCTGCCAACCAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | AATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGTTGATTCAGGTGTGGGTTaGAGGGTGCATCAAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: NARERGHGISAENAKSLVDSGVG*RVHQTH Trigger: ATGAGTTTGATGCACCCTTCAACCCACACCTGAATC...AACCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAGCTGATGACAGAGCCTaGTGGGGCGGTCCTCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGADDRA*WGGPLS Trigger: AGAGAGAGGACCGCCCCAGCAGGCTCTGTCATCAGC...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGACACACTCCAGTCGCCTaGATAGCGGTTGCTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGHTPVA*IAVAWG Trigger: CCCCCAAGCAACCGCTATGCAGGCGACTGGAGTGTG...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAGCCTCCAGCTCTAGGTaGAAGGTGTGGTCCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGASSSR*KVWSSL Trigger: GAGGCTGGACCACACCTTCCACCTAGAGCTGGAGGC...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | AATCCCATGATTGCCTTTAGATACTTCAAGGGAGGGAGAGAGAGTGTAGTGCTCTGCATAGCGGTTGCTTaGGGGACTTTCGGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: NPMIAFRYFKGGRESVVLCIAVA*GTFGAS Trigger: GGAGGCCCCGAAAGTCCCCCAAGCAACCGCTATGCA...GAGCACTACACTCTCTCTCCCTCCCTTGAAGTATCTAAAGGCAATCATGGGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | CCAATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGTTTGAGATTCAGGTGTaGGTTGAAGGGTGCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: PMLGRGAMASVLKMPRAWFEIQV*VEGCIK Trigger: TTTGATGCACCCTTCAACCCACACCTGAATCTCAAA...CCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAACCTCTGCTCCAGCCTaGGACCCTTCAAGGACACGA | + |
|
Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGTSAPA*DPSRTR Trigger: TCGTGTCCTTGAAGGGTCTCAGGCTGGAGCAGAGGT...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATACAGCCGCACTGTCCTaGTCAAAGGCATCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNTAALS*SKASRS Trigger: GCTTCGAGATGCCTTTGAGCAGGACAGTGCGGCTGT...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | AATCCCATGATTGCCTTTAGATACTTCAAGGGAGGGAGAGAGAGTGTAGTGCTCCACACTGCCAAGTTCTaGGGGGTCATGCGGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: NPMIAFRYFKGGRESVVLHTAKF*GVMRLW Trigger: CCACAACCGCATGACCCCGCAGAACTTGGCAGTGTG...GAGCACTACACTCTCTCTCCCTCCCTTGAAGTATCTAAAGGCAATCATGGGATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GTTTGGTTGGCAGCAGCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTTGCAGGACTTCAATGTaGCGCTTGAAGTCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VWLAAARGLTRDVLTPQGCRTSM*RLKSTA Trigger: TGCTGTGGACTTCAAGCGCCACATTGAAGTCCTGCA...ACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGCTGCTGCCAACCAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR TCA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTTTCTTCACTGCTGCTaGGCCACACAGACGGTACAG | + |
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Preference number: 4 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNFLHCC*ATQTVQ Trigger: CTGTACCGTCTGTGTGGCTCAGCAGCAGTGAAGAAA...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GTAATCAGAACCTGGTCCTTAGCAACCAGGAAGCAATTCCTTAGTAACCAGAGTACCTGGCCTGGGGACTaGTCACGTTCTACCAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VIRTWSLATRKQFLSNQSTWPGD*SRSTRS Trigger: GCTTCTGGTAGAACGTGAGCAGTCCCCAGGCCAGGT...ACTCTGGTTACTAAGGAATTGCTTCCTGGTTGCTAAGGACCAGGTTCTGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGATGGTCCGAAGCACACTaGCAAGTTCTGCGGGGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGWSEAH*QVLRGH Trigger: ATGACCCCGCAGAACTTGGCAGTGTGCTTCGGACCA...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GGAAAGGAAAGGTCTGACTCTGTCTCCATTTGCTGGTTGGAAATTCATCTCGGAGGGGTCATGCGGTTGTaGGTGTGGAAGGAAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: GKERSDSVSICWLEIHLGGVMRL*VWKEET Trigger: TGTCTCTTCCTTCCACACCCACAACCGCATGACCCC...TCCGAGATGAATTTCCAACCAGCAAATGGAGACAGAGTCAGACCTTTCCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR CAA 72 bp | ATGCTAATACTGGTTTGGTTGGCAGCAGCAAGAGGGTaGACTAGGGATGTTTTAACACCCCAGGGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLILVWLAAARG*TRDVLTPQGDA Trigger: AGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGCTGCTGCCAACCAAACCAGTATTAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR GCA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATAGGCACACATTGATCTaGTTGGAGAGTTCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARQWKILSHSMVPERVPHRHTLI*LESSLS Trigger: GGAGAGAGAACTCTCCAAGCAGATCAATGTGTGCCT...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CCA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATGGTCTTCTTCAGGGATaGGGTTGTACCAAATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARQWKILSHSMVPERVPHGLLQG*GCTKSH Trigger: GTGAGATTTGGTACAACCCCATCCCTGAAGAAGACC...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| 3UTR CAA 72 bp | TCTCCATTTGCTGGTTGGAAATTCATCTCGGAGTTTTaGCTAGAAGAGAGGGTTAGGGGAAATCACCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPFAGWKFISEF*LEERVRGNHLF Trigger: AAACAGGTGATTTCCCCTAACCCTCTCTTCTAGCAAAAACTCCGAGATGAATTTCCAACCAGCAAATGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS GCA 90 bp | CGGCCCCGAGGCCGAGTCACCACTTCTGGGCCCGCCAGCGGCAAGTaGAGAGGTGGCTGTCTTTTGGGCCTCAAATACGGTGCGACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RPRGRVTTSGPASGK*RGGCLLGLKYGATA Trigger: CGCAGTCGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGTGACTCGGCCTCGGGGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | TCTGAGGAGCCCTCTGGTGCCCTCAGGACCCAGGGAAGCCCTGCTTaGGTGTCCTTGGGCCATGGCTTCCAGCACCACCTGGTAGAGGGG | + |
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Preference number: 5 (lower is better) Translates to: SEEPSGALRTQGSPA*VSLGHGFQHHLVEG Trigger: CCCCTCTACCAGGTGGTGCTGGAAGCCATGGCCCAAGGACACCCAAGCAGGGCTTCCCTGGGTCCTGAGGGCACCAGAGGGCTCCTCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS TCA 90 bp | CCAGAAGAAGCGTCAGGGTGGCCCTCTCCACATCTGGCAGGCATCTaGGGAGCCCTCTGGTGCCCTCAGGACCCAGGGAAGCCCTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEASGWPSPHLAGI*GALWCPQDPGKPCL Trigger: CAAGCAGGGCTTCCCTGGGTCCTGAGGGCACCAGAGGGCTCCTCAGATGCCTGCCAGATGTGGAGAGGGCCACCCTGACGCTTCTTCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS GCA 90 bp | CGAAAGATGGTTGGCAATAGCACAGTGCCCTGGGCACAGGGCCGGTaGCGCCTCACACCAGGGTCCCATGCAAGTACCAAGGCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKMVGNSTVPWAQGR*RLTPGSHASTKARS Trigger: GCTGCGGGCCTTGGTACTTGCATGGGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCCCAGGGCACTGTGCTATTGCCAACCATCTTTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CAGCCTGAGACCCTTCAAGGACACGAGGTTCTGGTTCTGGGGGTTTaGGCTCTGAGCGCTGGGCTGGGTGGCCGCGGTCCTTGGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: QPETLQGHEVLVLGV*ALSAGLGGRGPWLL Trigger: CAGAAGCCAAGGACCGCGGCCACCCAGCCCAGCGCTCAGAGCCCAAACCCCCAGAACCAGAACCTCGTGTCCTTGAAGGGTCTCAGGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | GAGGAGTCCGGGCCGATGGACCCACTTCATAGGGCCGGAAGGCAGTaGGTGATGGTGGTCCTCCAGGACGCTCAGGCGAATCACCATCGC | + |
|
Preference number: 5 (lower is better) Translates to: EESGPMDPLHRAGRQ*VMVVLQDAQANHHR Trigger: GCGATGGTGATTCGCCTGAGCGTCCTGGAGGACCACCATCACCCACTGCCTTCCGGCCCTATGAAGTGGGTCCATCGGCCCGGACTCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CCGCTTCGAAGTGGCCCTGTGCGGGCCCGAGCTACCCCATCCACTTaGAGAAGGCAGCAGAGATCTCGTGGAGTAGCCCCGGGACTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PLRSGPVRARATPST*RRQQRSRGVAPGLG Trigger: ACCAAGTCCCGGGGCTACTCCACGAGATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS TCA 90 bp | GGGCTTCGAGGTGTCTCGGGGCTGGGTGGTACCTCTGCTCCAGCCTaGGACCCTTCAAGGACACGAGGTTCTGGTTCTGGGGGTTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GLRGVSGLGGTSAPA*DPSRTRGSGSGGLG Trigger: GCCCAAACCCCCAGAACCAGAACCTCGTGTCCTTGAAGGGTCTCAGGCTGGAGCAGAGGTACCACCCAGCCCCGAGACACCTCGAAGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS TCA 90 bp | ATCGCTGAGGTACCCACCCCTTGGGCTCCTAGACCCTCCAGCCACTaGTGCCTGCCCAGGAGTCCCCACACTGCTGTCCAGGTGATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: IAEVPTPWAPRPSSH*CLPRSPHTAVQVIA Trigger: CGCTATCACCTGGACAGCAGTGTGGGGACTCCTGGGCAGGCATCAGTGGCTGGAGGGTCTAGGAGCCCAAGGGGTGGGTACCTCAGCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS TCA 90 bp | AGTCCGGGCCGATGGACCCACTTCATAGGGCCGGAAGGCAGTGGGTaGTGGTGGTCCTCCAGGACGCTCAGGCGAATCACCATCGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGRWTHFIGPEGSG*WWSSRTLRRITIAE Trigger: CTCAGCGATGGTGATTCGCCTGAGCGTCCTGGAGGACCACCATCACCCACTGCCTTCCGGCCCTATGAAGTGGGTCCATCGGCCCGGACT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS GCA 90 bp | CACAGACGGTACAGCCCCACTACCCGCAGCCCTCGGCATTCGATCTaGCCCACACACTTTCGGATGATGAGAGGCACCTGGCCTGGGGAC | + |
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Preference number: 5 (lower is better) Translates to: HRRYSPTTRSPRHSI*PTHFRMMRGTWPGD Trigger: GTCCCCAGGCCAGGTGCCTCTCATCATCCGAAAGTGTGTGGGGCAGATCGAATGCCGAGGGCTGCGGGTAGTGGGGCTGTACCGTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | GTGGAAGGTGTGGTCCAGCCTCAGGAAGTCTGGTCCGCTTCGAAGTaGCCCTGTGCGGGCCCGAGCTACCCCATCCACTTGGAGAAGGCA | + |
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Preference number: 5 (lower is better) Translates to: VEGVVQPQEVWSASK*PCAGPSYPIHLEKA Trigger: TGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGGACCAGACTTCCTGAGGCTGGACCACACCTTCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | AAGGCCCGCAGCAGACGAGCAGCCTCCAGCTCTAGGTGGAAGGTGTaGTCCAGCCTCAGGAAGTCTGGTCCGCTTCGAAGTGGCCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KARSRRAASSSRWKV*SSLRKSGPLRSGPV Trigger: CACAGGGCCACTTCGAAGCGGACCAGACTTCCTGAGGCTGGACCACACCTTCCACCTAGAGCTGGAGGCTGCTCGTCTGCTGCGGGCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | TGCGCTTGGCACCCTCGAAAGATGGTTGGCAATAGCACAGTGCCCTaGGCACAGGGCCGGTGCCGCCTCACACCAGGGTCCCATGCAAGT | + |
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Preference number: 5 (lower is better) Translates to: CAWHPRKMVGNSTVP*AQGRCRLTPGSHAS Trigger: ACTTGCATGGGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCCCAGGGCACTGTGCTATTGCCAACCATCTTTCGAGGGTGCCAAGCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | AGGCCGAGTCACCACTTCTGGGCCCGCCAGCGGCAAGTGCAGAGGTaGCTGTCTTTTGGGCCTCAAATACGGTGCGACTGCGCCATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPSHHFWARQRQVQR*LSFGPQIRCDCAIW Trigger: CCAGATGGCGCAGTCGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGTGACTCGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS GCA 90 bp | TGTGGTCCAGCCTCAGGAAGTCTGGTCCGCTTCGAAGTGGCCCTGTaGGGGCCCGAGCTACCCCATCCACTTGGAGAAGGCAGCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGPASGSLVRFEVAL*GPELPHPLGEGSRD Trigger: ATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGGACCAGACTTCCTGAGGCTGGACCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CAGGACTTCAATGTGGCGCTTGAAGTCCACAGCACTGGTGACTCCTaGGCCAGAGCTACGGAGCCGGGGCCGAGAGGGTGTTTGTCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: QDFNVALEVHSTGDS*ARATEPGPRGCLSR Trigger: GCGAGACAAACACCCTCTCGGCCCCGGCTCCGTAGCTCTGGCCCAGGAGTCACCAGTGCTGTGGACTTCAAGCGCCACATTGAAGTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CCACTTCTGGGCCCGCCAGCGGCAAGTGCAGAGGTGGCTGTCTTTTaGGCCTCAAATACGGTGCGACTGCGCCATCTGGGGTATCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLLGPPAASAEVAVF*ASNTVRLRHLGYLR Trigger: CCTCAGATACCCCAGATGGCGCAGTCGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | GGAAGGCTGGCCCCTTGGCAACTCCCTAGCAACCAGGTGCTCAGTCTGAGCAACGGTAGGGGCTGCACCTaGGATGTTGGGGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRLAPWQLPSNQVLSLSNGRGCT*DVGAFW Trigger: CCAGAAGGCCCCAACATCCAAGGTGCAGCCCCTACC...GTTGCTCAGACTGAGCACCTGGTTGCTAGGGAGTTGCCAAGGGGCCAGCCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | GCAAGTACCAAGGCCCGCAGCAGACGAGCAGCCTCCAGCTCTAGGTaGAAGGTGTGGTCCAGCCTCAGGAAGTCTGGTCCGCTTCGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASTKARSRRAASSSR*KVWSSLRKSGPLRS Trigger: ACTTCGAAGCGGACCAGACTTCCTGAGGCTGGACCACACCTTCCACCTAGAGCTGGAGGCTGCTCGTCTGCTGCGGGCCTTGGTACTTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS GCA 90 bp | TGCCCCTCGGCTCTCCAGTCTCATCATCATCTTCCTCACTGTCGCTaGCTGTCACATGGTCATAGTCAGGCCCGGACAGGAAGTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPSALQSHHHLPHCR*LSHGHSQARTGSPA Trigger: GGCGGGACTTCCTGTCCGGGCCTGACTATGACCATGTGACAGGCAGCGACAGTGAGGAAGATGATGATGAGACTGGAGAGCCGAGGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CGGCATTCGATCTGCCCCACACACTTTCGGATGATGAGAGGCACCTaGCCTGGGGACTGCTCACGTTCTACCAGAAGCTGCAGAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHSICPTHFRMMRGT*PGDCSRSTRSCRGS Trigger: GCTCCCTCTGCAGCTTCTGGTAGAACGTGAGCAGTCCCCAGGCCAGGTGCCTCTCATCATCCGAAAGTGTGTGGGGCAGATCGAATGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS TCA 90 bp | ACTGTCCTGCTCAAAGGCATCTCGAAGCTCTTTCTTCACTGCTGCTaGGCCACACAGACGGTACAGCCCCACTACCCGCAGCCCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLLKGISKLFLHCC*ATQTVQPHYPQPSA Trigger: TGCCGAGGGCTGCGGGTAGTGGGGCTGTACCGTCTGTGTGGCTCAGCAGCAGTGAAGAAAGAGCTTCGAGATGCCTTTGAGCAGGACAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | TTCGATCTGCCCCACACACTTTCGGATGATGAGAGGCACCTGGCCTaGGGACTGCTCACGTTCTACCAGAAGCTGCAGAGGGAGCCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: FDLPHTLSDDERHLA*GLLTFYQKLQREPE Trigger: TTCGGGCTCCCTCTGCAGCTTCTGGTAGAACGTGAGCAGTCCCCAGGCCAGGTGCCTCTCATCATCCGAAAGTGTGTGGGGCAGATCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CCGAAGCACACTGCCAAGTTCTGCGGGGTCATGCGGTTGTGGGTGTaGAAGGAAGAGACAAGGCGCAGATGGTCCAGAAGAAGCGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PKHTAKFCGVMRLWV*KEETRRRWSRRSVR Trigger: CCTGACGCTTCTTCTGGACCATCTGCGCCTTGTCTCTTCCTTCCACACCCACAACCGCATGACCCCGCAGAACTTGGCAGTGTGCTTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | TTCCCCTGCAAAGGGGAGGCAAGAGAGGCCAGCCTAGCAAGCAGAACTGTTTCTTCTGGTTCTGGGGGTTaGGGCTCTGAGCGCTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FPCKGEAREASLASRTVSSGSGG*GSERWA Trigger: AGCCCAGCGCTCAGAGCCCAAACCCCCAGAACCAGA...AGAAACAGTTCTGCTTGCTAGGCTGGCCTCTCTTGCCTCCCCTTTGCAGGGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | CAGAGGAAGCTAGCTGTGATCCCAAGGGCTCAGGTGCGGGTGGTCTaGGGTCTTCTTCAGGGATGGGGTTGTACCAAATCTCACCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QRKLAVIPRAQVRVV*GLLQGWGCTKSHQQ Trigger: CTGCTGGTGAGATTTGGTACAACCCCATCCCTGAAGAAGACCCCAGACCACCCGCACCTGAGCCCTTGGGATCACAGCTAGCTTCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | GTTTGGTTGGCAGCAGCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTCCAGGGAAGCCCTGCTaGGGTGTCCTTGGGCCATGG | + |
|
Preference number: 5 (lower is better) Translates to: VWLAAARGLTRDVLTPQGPGKPC*GVLGPW Trigger: CCATGGCCCAAGGACACCCAAGCAGGGCTTCCCTGG...ACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGCTGCTGCCAACCAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | GGCCATGGCTTCCAGCACCACCTGGTAGAGGGGCTGGGTGATGAGTaGAGTAGGCAGTTCTCGAAGATAATCCTTGAGGATGCCTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHGFQHHLVEGLGDE*SRQFSKIILEDACD Trigger: ATCACAGGCATCCTCAAGGATTATCTTCGAGAACTGCCTACTCCACTCATCACCCAGCCCCTCTACCAGGTGGTGCTGGAAGCCATGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | AATGCTCGGGAGAGGGGCCATGGCATCAGTGCTGAAAATGCCAAGAGCCTGGTTGCTTTTTCATCTTCATaGAGAGGCGCCTGGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NARERGHGISAENAKSLVAFSSS*RGAWQG Trigger: GCCCTGCCAGGCGCCTCTCAATGAAGATGAAAAAGC...AACCAGGCTCTTGGCATTTTCAGCACTGATGCCATGGCCCCTCTCCCGAGCATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CCA 90 bp | GCTCTGCTGTGGCAGGGGCTTCTTGCTGTTCCGACAATGTTAGCTTaGCGTAAAGAAGTCCCTGGGGTTCAAGTCGAACGGCCAGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: ALLWQGLLAVPTMLA*RKEVPGVQVERPVV Trigger: AACAACTGGCCGTTCGACTTGAACCCCAGGGACTTCTTTACGCCAAGCTAACATTGTCGGAACAGCAAGAAGCCCCTGCCACAGCAGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATCTGCATAGCGGTTGCTaGGGGGACTTTCGGGGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNLHSGC*GDFRGL Trigger: GAGGCCCCGAAAGTCCCCCAAGCAACCGCTATGCAG...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATGCTGCACCTTGGATGTaGGGGCCTTCTGGCTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNAAPWM*GPSGSE Trigger: CTCTGAGCCAGAAGGCCCCAACATCCAAGGTGCAGC...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS-3UTR CAA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATTGCGGGGTCATGCGGTaGTGGGTGTGGAAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARQWKILSHSMVPERVPHCGVMR*WVWKEE Trigger: CTCTTCCTTCCACACCCACAACCGCATGACCCCGCA...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | AATGCCAAGAGCCTGGTTTCTGCAGCTAGGGCCCCAAACAATGGCACTAGGAATAGAGGTGGCTGTCTTTaGGGCCTCAAATACGGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: NAKSLVSAARAPNNGTRNRGGCL*GLKYGA Trigger: CGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCT...ATTCCTAGTGCCATTGTTTGGGGCCCTAGCTGCAGAAACCAGGCTCTTGGCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 90 bp | ATATCAGGGTACACATCTTCAGAGAGGCACACAGCCGCACTGTCCTaGTCAAAGGCATCTCGAAGCTCTTTCTTCACTGCTGCTGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ISGYTSSERHTAALS*SKASRSSFFTAAEP Trigger: TGGCTCAGCAGCAGTGAAGAAAGAGCTTCGAGATGCCTTTGAGCAGGACAGTGCGGCTGTGTGCCTCTCTGAAGATGTGTACCCTGATAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 90 bp | CTCCAGATCCAGGATGAGGGCATCAAAGTCTTTGAGATTCAGGTGTaGGTTGAAGGGTGCATCAAACTCATCTTCGAAGTCGGTAGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQIQDEGIKVFEIQV*VEGCIKLIFEVGSA Trigger: GGCACTACCGACTTCGAAGATGAGTTTGATGCACCCTTCAACCCACACCTGAATCTCAAAGACTTTGATGCCCTCATCCTGGATCTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATTCTTCAGGGATGGGGTaGTACCAAATCTCACCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARQWKILSHSMVPERVPHSSGMG*YQISPA Trigger: TGCTGGTGAGATTTGGTACAACCCCATCCCTGAAGA...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | GTAATCAGAACCTGGTCCTTAGCAACCAGGAAGCAATTCCTTAGTAACCAGAGTAGCTACCCCATCCACTaGGAGAAGGCAGCAGAGATC | + |
|
Preference number: 5 (lower is better) Translates to: VIRTWSLATRKQFLSNQSSYPIH*EKAAEI Trigger: GATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCT...ACTCTGGTTACTAAGGAATTGCTTCCTGGTTGCTAAGGACCAGGTTCTGATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | GCAAGAGGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATAGGGCATCAAAGTCTTaGAGATTCAGGTGTGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ARGLTRDVLTPQGDAHSNRASKS*RFRCGL Trigger: CAACCCACACCTGAATCTCAAAGACTTTGATGCCCT...ATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCCTCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCAATGGAAAATCCTATCCCACTCTATGGTCCCTGAAAGAGTTCCACATCACACATTGATCTGCTaGGAGAGTTCTCTCTCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: ARQWKILSHSMVPERVPHHTLIC*ESSLSR Trigger: TCTGGAGAGAGAACTCTCCAAGCAGATCAATGTGTG...ATGTGGAACTCTTTCAGGGACCATAGAGTGGGATAGGATTTTCCATTGCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | AATCCCATGATTGCCTTTAGATACTTCAAGGGAGGGAGAGAGAGTGTAGTGCTCAGATTCAGGTGTGGGTaGAAGGGTGCATCAAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: NPMIAFRYFKGGRESVVLRFRCG*KGASNS Trigger: TGAGTTTGATGCACCCTTCAACCCACACCTGAATCT...GAGCACTACACTCTCTCTCCCTCCCTTGAAGTATCTAAAGGCAATCATGGGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS-3UTR CAA 90 bp | GGGTTGACTAGGGATGTTTTAACACCCCAGGGTGATGCTCACAGTAATTGGTGTATGCCTGTGATGACATaGATATCAGGGTACACATCT | + |
|
Preference number: 5 (lower is better) Translates to: GLTRDVLTPQGDAHSNWCMPVMT*ISGYTS Trigger: AGATGTGTACCCTGATATCAATGTCATCACAGGCAT...ACACCAATTACTGTGAGCATCACCCTGGGGTGTTAAAACATCCCTAGTCAACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GGGGCCTCCGCGGCCCCGAGGCCGAGTCACCACTTCTaGGCCCGCCAGCGGCAAGTGCAGAGGTGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GASAAPRPSHHF*ARQRQVQRWLS Trigger: AGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGTGACTCGGCCTCGGGGCCGCGGAGGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GGCACAGGGCCGGTGCCGCCTCACACCAGGGTCCCATaGAAGTACCAAGGCCCGCAGCAGACGAGCAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: GTGPVPPHTRVP*KYQGPQQTSSL Trigger: GAGGCTGCTCGTCTGCTGCGGGCCTTGGTACTTGCATGGGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | CCGGGACTTGGTCGCAGACCCCCTAGCCCATACAGGTaGAGGCTGAGACGCCCCCAGAGGGCAGCTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PGLGRRPPSPYR*RLRRPQRAAGG Trigger: TCCTCCAGCTGCCCTCTGGGGGCGTCTCAGCCTGCACCTGTATGGGCTAGGGGGTCTGCGACCAAGTCCCGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GGAGCCCTCTGGTGCCCTCAGGACCCAGGGAAGCCCTaGTTGGGTGTCCTTGGGCCATGGCTTCCAGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: GALWCPQDPGKP*LGVLGPWLPAP Trigger: TGGTGCTGGAAGCCATGGCCCAAGGACACCCAAGCAGGGCTTCCCTGGGTCCTGAGGGCACCAGAGGGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 72 bp | GACCCTTCAAGGACACGAGGTTCTGGTTCTGGGGGTTaGGGCTCTGAGCGCTGGGCTGGGTGGCCGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DPSRTRGSGSGG*GSERWAGWPRS Trigger: GGACCGCGGCCACCCAGCCCAGCGCTCAGAGCCCAAACCCCCAGAACCAGAACCTCGTGTCCTTGAAGGGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 72 bp | GCCCTCAGGACCCAGGGAAGCCCTGCTTGGGTGTCCTaGGGCCATGGCTTCCAGCACCACCTGGTAGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRTQGSPAWVS*GHGFQHHLVEG Trigger: CCCCTCTACCAGGTGGTGCTGGAAGCCATGGCCCAAGGACACCCAAGCAGGGCTTCCCTGGGTCCTGAGGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | AGCCTGCTGGGGCGGTCCTCTCTCTATCCCGGCCTGTaGGAGTACTTCTTAGGCTTAGGCGGCGCCGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLLGRSSLYPGL*EYFLGLGGAGA Trigger: AGCTCCGGCGCCGCCTAAGCCTAAGAAGTACTCGCACAGGCCGGGATAGAGAGAGGACCGCCCCAGCAGGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GCCTCAGGAAGTCTGGTCCGCTTCGAAGTGGCCCTGTaGGGGCCCGAGCTACCCCATCCACTTGGAGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ASGSLVRFEVAL*GPELPHPLGEG Trigger: GCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGGACCAGACTTCCTGAGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | ATACAGGTGCAGGCTGAGACGCCCCCAGAGGGCAGCTaGAGGAGTCCGGGCCGATGGACCCACTTCATAGGG | + |
|
Preference number: 6 (lower is better) Translates to: IQVQAETPPEGS*RSPGRWTHFIG Trigger: CCCTATGAAGTGGGTCCATCGGCCCGGACTCCTCCAGCTGCCCTCTGGGGGCGTCTCAGCCTGCACCTGTAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | AGTGGCCCTGTGCGGGCCCGAGCTACCCCATCCACTTaGAGAAGGCAGCAGAGATCTCGTGGAGTAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGPVRARATPST*RRQQRSRGVAP Trigger: CGGGGCTACTCCACGAGATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GTGGTCCAGCCTCAGGAAGTCTGGTCCGCTTCGAAGTaGCCCTGTGCGGGCCCGAGCTACCCCATCCACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VVQPQEVWSASK*PCAGPSYPIHL Trigger: CAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGGACCAGACTTCCTGAGGCTGGACCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CACCCTCGAAAGATGGTTGGCAATAGCACAGTGCCCTaGGCACAGGGCCGGTGCCGCCTCACACCAGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: HPRKMVGNSTVP*AQGRCRLTPGS Trigger: GGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCCCAGGGCACTGTGCTATTGCCAACCATCTTTCGAGGGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 90 bp | TCCGCTTCGAAGTGGCCCTGTGCGGGCCCGAGCTACCCCATCCACTaGGAGAAGGCAGCAGAGATCTCGTGGAGTAGCCCCGGGACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SASKWPCAGPSYPIH*EKAAEISWSSPGTW Trigger: CCAAGTCCCGGGGCTACTCCACGAGATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTTCGAAGCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GGGGCTTCGAGGTGTCTCGGGGCTGGGTGGTACCTCTaGTCCAGCCTGAGACCCTTCAAGGACACGAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GASRCLGAGWYL*SSLRPFKDTRF Trigger: GAACCTCGTGTCCTTGAAGGGTCTCAGGCTGGAGCAGAGGTACCACCCAGCCCCGAGACACCTCGAAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GTTGGCAATAGCACAGTGCCCTGGGCACAGGGCCGGTaGCGCCTCACACCAGGGTCCCATGCAAGTACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VGNSTVPWAQGR*RLTPGSHASTK Trigger: CTTGGTACTTGCATGGGACCCTGGTGTGAGGCGGCACCGGCCCTGTGCCCAGGGCACTGTGCTATTGCCAAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CGAGGTTCTGGTTCTGGGGGTTTGGGCTCTGAGCGCTaGGCTGGGTGGCCGCGGTCCTTGGCTTCTGACTTT | + |
|
Preference number: 6 (lower is better) Translates to: RGSGSGGLGSER*AGWPRSLASDF Trigger: AAAGTCAGAAGCCAAGGACCGCGGCCACCCAGCCCAGCGCTCAGAGCCCAAACCCCCAGAACCAGAACCTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GCTGTCCAGGTGATAGCGGCTGATGACAGAGCCTGCTaGGGCGGTCCTCTCTCTATCCCGGCCTGTGCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: AVQVIAADDRAC*GGPLSIPACAS Trigger: ACTCGCACAGGCCGGGATAGAGAGAGGACCGCCCCAGCAGGCTCTGTCATCAGCCGCTATCACCTGGACAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GGGCCGATGGACCCACTTCATAGGGCCGGAAGGCAGTaGGTGATGGTGGTCCTCCAGGACGCTCAGGCGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GPMDPLHRAGRQ*VMVVLQDAQAN Trigger: ATTCGCCTGAGCGTCCTGGAGGACCACCATCACCCACTGCCTTCCGGCCCTATGAAGTGGGTCCATCGGCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GTCCAGAAGAAGCGTCAGGGTGGCCCTCTCCACATCTaGCAGGCATCTGAGGAGCCCTCTGGTGCCCTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQKKRQGGPLHI*QASEEPSGALR Trigger: CCTGAGGGCACCAGAGGGCTCCTCAGATGCCTGCCAGATGTGGAGAGGGCCACCCTGACGCTTCTTCTGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 72 bp | AAGTGGCCCTGTGCGGGCCCGAGCTACCCCATCCACTaGGAGAAGGCAGCAGAGATCTCGTGGAGTAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KWPCAGPSYPIH*EKAAEISWSSP Trigger: GGGGCTACTCCACGAGATCTCTGCTGCCTTCTCCAAGTGGATGGGGTAGCTCGGGCCCGCACAGGGCCACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS TCA 72 bp | GGTGTCTCGGGGCTGGGTGGTACCTCTGCTCCAGCCTaGGACCCTTCAAGGACACGAGGTTCTGGTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: GVSGLGGTSAPA*DPSRTRGSGSG Trigger: CCCAGAACCAGAACCTCGTGTCCTTGAAGGGTCTCAGGCTGGAGCAGAGGTACCACCCAGCCCCGAGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS TCA 72 bp | CGATGGACCCACTTCATAGGGCCGGAAGGCAGTGGGTaGTGGTGGTCCTCCAGGACGCTCAGGCGAATCACC | + |
|
Preference number: 6 (lower is better) Translates to: RWTHFIGPEGSG*WWSSRTLRRIT Trigger: GGTGATTCGCCTGAGCGTCCTGGAGGACCACCATCACCCACTGCCTTCCGGCCCTATGAAGTGGGTCCATCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | GGCCGAGTCACCACTTCTGGGCCCGCCAGCGGCAAGTaGAGAGGTGGCTGTCTTTTGGGCCTCAAATACGGT | + |
|
Preference number: 6 (lower is better) Translates to: GRVTTSGPASGK*RGGCLLGLKYG Trigger: ACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGTGACTCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CACCACTTCTGGGCCCGCCAGCGGCAAGTGCAGAGGTaGCTGTCTTTTGGGCCTCAAATACGGTGCGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: HHFWARQRQVQR*LSFGPQIRCDC Trigger: GCAGTCGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 90 bp | ACCACTTCTGGGCCCGCCAGCGGCAAGTGCAGAGGTGGCTGTCTTTaGGGCCTCAAATACGGTGCGACTGCGCCATCTGGGGTATCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: TTSGPASGKCRGGCL*GLKYGATAPSGVSE Trigger: CTCAGATACCCCAGATGGCGCAGTCGCACCGTATTTGAGGCCCAAAAGACAGCCACCTCTGCACTTGCCGCTGGCGGGCCCAGAAGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | CACTTTCGGATGATGAGAGGCACCTGGCCTGGGGACTaGTCACGTTCTACCAGAAGCTGCAGAGGGAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: HFRMMRGTWPGD*SRSTRSCRGSP Trigger: CGGGCTCCCTCTGCAGCTTCTGGTAGAACGTGAGCAGTCCCCAGGCCAGGTGCCTCTCATCATCCGAAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | TACAGCCCCACTACCCGCAGCCCTCGGCATTCGATCTaGCCCACACACTTTCGGATGATGAGAGGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSPTTRSPRHSI*PTHFRMMRGTW Trigger: CCAGGTGCCTCTCATCATCCGAAAGTGTGTGGGGCAGATCGAATGCCGAGGGCTGCGGGTAGTGGGGCTGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GCTCAGGTGCGGGTGGTCTGGGGTCTTCTTCAGGGATaGGGTTGTACCAAATCTCACCAGCAGGCTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AQVRVVWGLLQG*GCTKSHQQAPH Trigger: GTGGGGAGCCTGCTGGTGAGATTTGGTACAACCCCATCCCTGAAGAAGACCCCAGACCACCCGCACCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 90 bp | TTAGGCTTAGGCGGCGCCGGAGCTCTGGCAGCTTTTTCATCTTCATaGAGAGGCGCCTGGCAGGGCCTGGGGACTTGGTACGGGAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: LGLGGAGALAAFSSS*RGAWQGLGTWYGRF Trigger: AAACCTCCCGTACCAAGTCCCCAGGCCCTGCCAGGCGCCTCTCAATGAAGATGAAAAAGCTGCCAGAGCTCCGGCGCCGCCTAAGCCTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | CTGGTCCGAAGCACACTGCCAAGTTCTGCGGGGTCATaGGGTTGTGGGTGTGGAAGGAAGAGACAAGGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: LVRSTLPSSAGS*GCGCGRKRQGA Trigger: TGCGCCTTGTCTCTTCCTTCCACACCCACAACCGCATGACCCCGCAGAACTTGGCAGTGTGCTTCGGACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CCCCACACACTTTCGGATGATGAGAGGCACCTGGCCTaGGGACTGCTCACGTTCTACCAGAAGCTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PHTLSDDERHLA*GLLTFYQKLQR Trigger: CCTCTGCAGCTTCTGGTAGAACGTGAGCAGTCCCCAGGCCAGGTGCCTCTCATCATCCGAAAGTGTGTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | AAGCACACTGCCAAGTTCTGCGGGGTCATGCGGTTGTaGGTGTGGAAGGAAGAGACAAGGCGCAGATGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: KHTAKFCGVMRL*VWKEETRRRWS Trigger: GGACCATCTGCGCCTTGTCTCTTCCTTCCACACCCACAACCGCATGACCCCGCAGAACTTGGCAGTGTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 90 bp | AACACTGGTCCGAAGCACACTGCCAAGTTCTGCGGGGTCATGCGGTaGTGGGTGTGGAAGGAAGAGACAAGGCGCAGATGGTCCAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: NTGPKHTAKFCGVMR*WVWKEETRRRWSRR Trigger: TCTTCTGGACCATCTGCGCCTTGTCTCTTCCTTCCACACCCACAACCGCATGACCCCGCAGAACTTGGCAGTGTGCTTCGGACCAGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS TCA 72 bp | CTCAAAGGCATCTCGAAGCTCTTTCTTCACTGCTGCTaGGCCACACAGACGGTACAGCCCCACTACCCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LKGISKLFLHCC*ATQTVQPHYPQ Trigger: CTGCGGGTAGTGGGGCTGTACCGTCTGTGTGGCTCAGCAGCAGTGAAGAAAGAGCTTCGAGATGCCTTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CTAGCTGTGATCCCAAGGGCTCAGGTGCGGGTGGTCTaGGGTCTTCTTCAGGGATGGGGTTGTACCAAATCT | + |
|
Preference number: 6 (lower is better) Translates to: LAVIPRAQVRVV*GLLQGWGCTKS Trigger: AGATTTGGTACAACCCCATCCCTGAAGAAGACCCCAGACCACCCGCACCTGAGCCCTTGGGATCACAGCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | GTGCGACTGCGCCATCTGGGGTATCTGAGGGCCGTCTaGTATCTGGCCAAGACTGTAACAGGTAATGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VRLRHLGYLRAV*YLAKTVTGNAG Trigger: TCCTGCATTACCTGTTACAGTCTTGGCCAGATACCAGACGGCCCTCAGATACCCCAGATGGCGCAGTCGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | TGGCAGGGGCTTCTTGCTGTTCCGACAATGTTAGCTTaGCGTAAAGAAGTCCCTGGGGTTCAAGTCGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: WQGLLAVPTMLA*RKEVPGVQVER Trigger: CCGTTCGACTTGAACCCCAGGGACTTCTTTACGCCAAGCTAACATTGTCGGAACAGCAAGAAGCCCCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | TTCCAGCACCACCTGGTAGAGGGGCTGGGTGATGAGTaGAGTAGGCAGTTCTCGAAGATAATCCTTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: FQHHLVEGLGDE*SRQFSKIILED Trigger: ATCCTCAAGGATTATCTTCGAGAACTGCCTACTCCACTCATCACCCAGCCCCTCTACCAGGTGGTGCTGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS GCA 72 bp | TACACATCTTCAGAGAGGCACACAGCCGCACTGTCCTaGTCAAAGGCATCTCGAAGCTCTTTCTTCACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: YTSSERHTAALS*SKASRSSFFTA Trigger: AGCAGTGAAGAAAGAGCTTCGAGATGCCTTTGAGCAGGACAGTGCGGCTGTGTGCCTCTCTGAAGATGTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CAA 90 bp | AGATCCAGGATGAGGGCATCAAAGTCTTTGAGATTCAGGTGTGGGTaGAAGGGTGCATCAAACTCATCTTCGAAGTCGGTAGTGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: RSRMRASKSLRFRCG*KGASNSSSKSVVPL Trigger: GAGGGGCACTACCGACTTCGAAGATGAGTTTGATGCACCCTTCAACCCACACCTGAATCTCAAAGACTTTGATGCCCTCATCCTGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
||
| CDS CCA 72 bp | CAGGATGAGGGCATCAAAGTCTTTGAGATTCAGGTGTaGGTTGAAGGGTGCATCAAACTCATCTTCGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: QDEGIKVFEIQV*VEGCIKLIFEV Trigger: GACTTCGAAGATGAGTTTGATGCACCCTTCAACCCACACCTGAATCTCAAAGACTTTGATGCCCTCATCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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| CDS CAA 72 bp | ATGAGGGCATCAAAGTCTTTGAGATTCAGGTGTGGGTaGAAGGGTGCATCAAACTCATCTTCGAAGTCGGTA | + |
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Preference number: 6 (lower is better) Translates to: MRASKSLRFRCG*KGASNSSSKSV Trigger: TACCGACTTCGAAGATGAGTTTGATGCACCCTTCAACCCACACCTGAATCTCAAAGACTTTGATGCCCTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040580.7 |
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