Pregenerated sensors for SYCP2L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038651Ensembl transcript IDs: ENSMUST00000124093.3, ENSMUST00000141292.9
Found 74 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | CATGGCAAGGTCATTCCTCTGCCTTCCCACAGACATTCGACACAGTaGCTCAGAGAGCGCCACCTGCTGGCTATAGTCGCCCACAGTCAA | + |
Preference number: 5 (lower is better) Translates to: HGKVIPLPSHRHSTQ*LRERHLLAIVAHSQ Trigger: TTGACTGTGGGCGACTATAGCCAGCAGGTGGCGCTCTCTGAGGCACTGTGTCGAATGTCTGTGGGAAGGCAGAGGAATGACCTTGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | GAGCGCCACCTGCTGGCTATAGTCGCCCACAGTCAAGATCGTCCTTaGCAATTCTTTCATAAGACAGCATGCGCCTTCTGCCGAAGAGAG | + |
Preference number: 5 (lower is better) Translates to: ERHLLAIVAHSQDRP*QFFHKTACAFCRRE Trigger: CTCTCTTCGGCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGGACGATCTTGACTGTGGGCGACTATAGCCAGCAGGTGGCGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | GTGTCTGTCACGACGGGGGATCCCGGAGCATCTTCTAATCTTGATTaGTTTAGGGCAGCAACACTCCCATCGGGTATCTCTCTGTGTCCC | + |
Preference number: 5 (lower is better) Translates to: VSVTTGDPGASSNLD*FRAATLPSGISLCP Trigger: GGGACACAGAGAGATACCCGATGGGAGTGTTGCTGCCCTAAAGCAATCAAGATTAGAAGATGCTCCGGGATCCCCCGTCGTGACAGACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 90 bp | GCATGCGCCTTCTGCCGAAGAGAGCTTTCTTCTTTCTTCCTGGGGTaGAGCGTTCAAAATGCAGTTCAAAGTCGCCAGAGTCTCCTGCTG | + |
Preference number: 5 (lower is better) Translates to: ACAFCRRELSSFFLG*SVQNAVQSRQSLLL Trigger: CAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 90 bp | AACAGCAAACTTGCCAGAGCATCCTTCTCGAGGCATTTCAGTGTCTaGAGATTCTTCTCCAAGCCGCTCAGCTCCCGAAGGACAGAGCTG | + |
Preference number: 5 (lower is better) Translates to: NSKLARASFSRHFSV*RFFSKPLSSRRTEL Trigger: CAGCTCTGTCCTTCGGGAGCTGAGCGGCTTGGAGAAGAATCTTCAGACACTGAAATGCCTCGAGAAGGATGCTCTGGCAAGTTTGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | AGACAGCATGCGCCTTCTGCCGAAGAGAGCTTTCTTCTTTCTTCCTaGGGTGCAGCGTTCAAAATGCAGTTCAAAGTCGCCAGAGTCTCC | + |
Preference number: 5 (lower is better) Translates to: RQHAPSAEESFLLSS*GAAFKMQFKVARVS Trigger: GGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 90 bp | GGTGCAGCGTTCAAAATGCAGTTCAAAGTCGCCAGAGTCTCCTGCTaGATGGAGGGCTTCACGGAATCTTCTGCCACCAGGAATCCTAAA | + |
Preference number: 5 (lower is better) Translates to: GAAFKMQFKVARVSC*MEGFTESSATRNPK Trigger: TTTAGGATTCCTGGTGGCAGAAGATTCCGTGAAGCCCTCCATTCAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTGCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | CCGAAGAGAGCTTTCTTCTTTCTTCCTGGGGTGCAGCGTTCAAAATaGAGTTCAAAGTCGCCAGAGTCTCCTGCTGAATGGAGGGCTTCA | + |
Preference number: 5 (lower is better) Translates to: PKRAFFFLPGVQRSK*SSKSPESPAEWRAS Trigger: TGAAGCCCTCCATTCAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | GCCCACAGTCAAGATCGTCCTTGCCAATTCTTTCATAAGACAGCATaGGCCTTCTGCCGAAGAGAGCTTTCTTCTTTCTTCCTGGGGTGC | + |
Preference number: 5 (lower is better) Translates to: AHSQDRPCQFFHKTA*AFCRRELSSFFLGC Trigger: GCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGGACGATCTTGACTGTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | CTTTGGGATCAGTCCTTGCTGGATAAGCAAAGGTTCCTCGTGGTCTaGGTCATCCCTGAAGAATCTCTGGATACATTTCAGCAGCAGGGA | + |
Preference number: 5 (lower is better) Translates to: LWDQSLLDKQRFLVV*VIPEESLDTFQQQG Trigger: TCCCTGCTGCTGAAATGTATCCAGAGATTCTTCAGGGATGACCCAGACCACGAGGAACCTTTGCTTATCCAGCAAGGACTGATCCCAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | CAGCGTTCAAAATGCAGTTCAAAGTCGCCAGAGTCTCCTGCTGAATaGAGGGCTTCACGGAATCTTCTGCCACCAGGAATCCTAAACGAA | + |
Preference number: 5 (lower is better) Translates to: QRSKCSSKSPESPAE*RASRNLLPPGILNE Trigger: TTCGTTTAGGATTCCTGGTGGCAGAAGATTCCGTGAAGCCCTCCATTCAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 90 bp | AGGGCTTCACGGAATCTTCTGCCACCAGGAATCCTAAACGAAGTATaGAGGAATCCAACATCTGGACTGTCGCTTTCCTGCTATGTCTGG | + |
Preference number: 5 (lower is better) Translates to: RASRNLLPPGILNEV*RNPTSGLSLSCYVW Trigger: CCAGACATAGCAGGAAAGCGACAGTCCAGATGTTGGATTCCTTCATACTTCGTTTAGGATTCCTGGTGGCAGAAGATTCCGTGAAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 90 bp | CAGGCCGTCTGTTACTCTCGTCTTCTTTGTGGAGGAGCTGGGTTCTaGGCCTCTTCGTTCAGGTTTCTCAAGTCCTATTTTCTGTGTAGA | + |
Preference number: 5 (lower is better) Translates to: QAVCYSRLLCGGAGF*ASSFRFLKSYFLCR Trigger: TCTACACAGAAAATAGGACTTGAGAAACCTGAACGAAGAGGCTCAGAACCCAGCTCCTCCACAAAGAAGACGAGAGTAACAGACGGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | CAAGATCGTCCTTGCCAATTCTTTCATAAGACAGCATGCGCCTTCTaGCGAAGAGAGCTTTCTTCTTTCTTCCTGGGGTGCAGCGTTCAA | + |
Preference number: 5 (lower is better) Translates to: QDRPCQFFHKTACAF*RRELSSFFLGCSVQ Trigger: TTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGGACGATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | ACACTCCCATCGGGTATCTCTCTGTGTCCCAAGTTTTCTAGCTTGTaGTTGAAGCTGCTGTTCCCCATGAATGACTCTCGGTTCACAATC | + |
Preference number: 5 (lower is better) Translates to: TLPSGISLCPKFSSL*LKLLFPMNDSRFTI Trigger: GATTGTGAACCGAGAGTCATTCATGGGGAACAGCAGCTTCAAGCACAAGCTAGAAAACTTGGGACACAGAGAGATACCCGATGGGAGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 90 bp | CTTCTGATTGGGGAGAGTGGTAGGATCCGTAGGGAACTGACTCTCTaGTTCTTCCTCTGGGAATATGTTCTTAGGGATTTCCTTTTGTGG | + |
Preference number: 5 (lower is better) Translates to: LLIGESGRIRRELTL*FFLWEYVLRDFLLW Trigger: CCACAAAAGGAAATCCCTAAGAACATATTCCCAGAGGAAGAAGCAGAGAGTCAGTTCCCTACGGATCCTACCACTCTCCCCAATCAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 90 bp | TCTGCCACCAGGAATCCTAAACGAAGTATGAAGGAATCCAACATCTaGACTGTCGCTTTCCTGCTATGTCTGGAAATGATCAGTGCCGTG | + |
Preference number: 5 (lower is better) Translates to: SATRNPKRSMKESNI*TVAFLLCLEMISAV Trigger: CACGGCACTGATCATTTCCAGACATAGCAGGAAAGCGACAGTCCAGATGTTGGATTCCTTCATACTTCGTTTAGGATTCCTGGTGGCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | TTTAAAAGCAGAACCATTTACACTTCCTGGCATGTCTTCTTGAGATaGAGTAGAAGTGTCTGTCACGACGGGGGATCCCGGAGCATCTTC | + |
Preference number: 5 (lower is better) Translates to: FKSRTIYTSWHVFLR*SRSVCHDGGSRSIF Trigger: GAAGATGCTCCGGGATCCCCCGTCGTGACAGACACTTCTACTCCATCTCAAGAAGACATGCCAGGAAGTGTAAATGGTTCTGCTTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 90 bp | CCTGTTATTATTTCAAACCAGGAAACCATCTTTGGGATCAGTCCTTaGTGGATAAGCAAAGGTTCCTCGTGGTCTGGGTCATCCCTGAAG | + |
Preference number: 5 (lower is better) Translates to: PVIISNQETIFGISP*WISKGSSWSGSSLK Trigger: CTTCAGGGATGACCCAGACCACGAGGAACCTTTGCTTATCCAGCAAGGACTGATCCCAAAGATGGTTTCCTGGTTTGAAATAATAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | ATAAGCAAAGGTTCCTCGTGGTCTGGGTCATCCCTGAAGAATCTCTaGATACATTTCAGCAGCAGGGAACAATTCTGGAACTCGTTCTTA | + |
Preference number: 5 (lower is better) Translates to: ISKGSSWSGSSLKNL*IHFSSREQFWNSFL Trigger: TAAGAACGAGTTCCAGAATTGTTCCCTGCTGCTGAAATGTATCCAGAGATTCTTCAGGGATGACCCAGACCACGAGGAACCTTTGCTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | GTTATTATTTCAAACCAGGAAACCATCTTTGGGATCAGTCCTTGCTaGATAAGCAAAGGTTCCTCGTGGTCTGGGTCATCCCTGAAGAAT | + |
Preference number: 5 (lower is better) Translates to: VIISNQETIFGISPC*ISKGSSWSGSSLKN Trigger: ATTCTTCAGGGATGACCCAGACCACGAGGAACCTTTGCTTATCCAGCAAGGACTGATCCCAAAGATGGTTTCCTGGTTTGAAATAATAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | TCCCTGAAGAATCTCTGGATACATTTCAGCAGCAGGGAACAATTCTaGAACTCGTTCTTATCCAGCTCCTCTTTTATCAGTCTGTCAAGA | + |
Preference number: 5 (lower is better) Translates to: SLKNLWIHFSSREQF*NSFLSSSSFISLSR Trigger: TCTTGACAGACTGATAAAAGAGGAGCTGGATAAGAACGAGTTCCAGAATTGTTCCCTGCTGCTGAAATGTATCCAGAGATTCTTCAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | AAGTCTGAAATGAGGGGGCCTGTTTGTCTTCTCCCAAAGCTTGAATaGAAGCTTGTAAAATGCCAAGTTGCCTATCGAAGTGGATTTCTA | + |
Preference number: 5 (lower is better) Translates to: KSEMRGPVCLLPKLE*KLVKCQVAYRSGFL Trigger: TAGAAATCCACTTCGATAGGCAACTTGGCATTTTACAAGCTTCCATTCAAGCTTTGGGAGAAGACAAACAGGCCCCCTCATTTCAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 90 bp | TTCTTAGGGATTTCCTTTTGTGGTTCTGGGTCCAGGATCGTTCATTaGTACTTAAACTTGAATCTTCATTACTCTCCAAGAGGTCATGGT | + |
Preference number: 5 (lower is better) Translates to: FLGISFCGSGSRIVH*YLNLNLHYSPRGHG Trigger: ACCATGACCTCTTGGAGAGTAATGAAGATTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 90 bp | TTCTTCCTCTGGGAATATGTTCTTAGGGATTTCCTTTTGTGGTTCTaGGTCCAGGATCGTTCATTGGTACTTAAACTTGAATCTTCATTA | + |
Preference number: 5 (lower is better) Translates to: FFLWEYVLRDFLLWF*VQDRSLVLKLESSL Trigger: TAATGAAGATTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAACATATTCCCAGAGGAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS TCA 72 bp | TCCAGGTACTCTAAGGAAGATGGACCGCTGGATGGGTaGGGACTTCGGGGTTCTCTCCAGTGCAGGCCGTCT | + |
Preference number: 6 (lower is better) Translates to: SRYSKEDGPLDG*GLRGSLQCRPS Trigger: AGACGGCCTGCACTGGAGAGAACCCCGAAGTCCTCACCCATCCAGCGGTCCATCTTCCTTAGAGTACCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 72 bp | GTCATTCCTCTGCCTTCCCACAGACATTCGACACAGTaGCTCAGAGAGCGCCACCTGCTGGCTATAGTCGCC | + |
Preference number: 6 (lower is better) Translates to: VIPLPSHRHSTQ*LRERHLLAIVA Trigger: GGCGACTATAGCCAGCAGGTGGCGCTCTCTGAGGCACTGTGTCGAATGTCTGTGGGAAGGCAGAGGAATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | TTCTCCAAGCCGCTCAGCTCCCGAAGGACAGAGCTGTaGAACCTCTCCAGCGTGTCTAGTCTGCACGTGTGT | + |
Preference number: 6 (lower is better) Translates to: FSKPLSSRRTEL*NLSSVSSLHVC Trigger: ACACACGTGCAGACTAGACACGCTGGAGAGGTTTCACAGCTCTGTCCTTCGGGAGCTGAGCGGCTTGGAGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | GGTCAGCTTCAGCATCCACGAGCTCTGGCAGGAGTGTaGATTCTTCCGCATCCTCTGCTTCTCTTTCACAGC | + |
Preference number: 6 (lower is better) Translates to: GQLQHPRALAGV*ILPHPLLLFHS Trigger: GCTGTGAAAGAGAAGCAGAGGATGCGGAAGAATCCACACTCCTGCCAGAGCTCGTGGATGCTGAAGCTGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | CTCTCCAGTGCAGGCCGTCTGTTACTCTCGTCTTCTTaGTGGAGGAGCTGGGTTCTGAGCCTCTTCGTTCAG | + |
Preference number: 6 (lower is better) Translates to: LSSAGRLLLSSS*WRSWVLSLFVQ Trigger: CTGAACGAAGAGGCTCAGAACCCAGCTCCTCCACAAAGAAGACGAGAGTAACAGACGGCCTGCACTGGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | CTTGCCAGAGCATCCTTCTCGAGGCATTTCAGTGTCTaGAGATTCTTCTCCAAGCCGCTCAGCTCCCGAAGG | + |
Preference number: 6 (lower is better) Translates to: LARASFSRHFSV*RFFSKPLSSRR Trigger: CCTTCGGGAGCTGAGCGGCTTGGAGAAGAATCTTCAGACACTGAAATGCCTCGAGAAGGATGCTCTGGCAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | TCCAGTGCAGGCCGTCTGTTACTCTCGTCTTCTTTGTaGAGGAGCTGGGTTCTGAGCCTCTTCGTTCAGGTT | + |
Preference number: 6 (lower is better) Translates to: SSAGRLLLSSSL*RSWVLSLFVQV Trigger: AACCTGAACGAAGAGGCTCAGAACCCAGCTCCTCCACAAAGAAGACGAGAGTAACAGACGGCCTGCACTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | CTGTCACGACGGGGGATCCCGGAGCATCTTCTAATCTaGATTGCTTTAGGGCAGCAACACTCCCATCGGGTA | + |
Preference number: 6 (lower is better) Translates to: LSRRGIPEHLLI*IALGQQHSHRV Trigger: TACCCGATGGGAGTGTTGCTGCCCTAAAGCAATCAAGATTAGAAGATGCTCCGGGATCCCCCGTCGTGACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 72 bp | ACGACGGGGGATCCCGGAGCATCTTCTAATCTTGATTaGTTTAGGGCAGCAACACTCCCATCGGGTATCTCT | + |
Preference number: 6 (lower is better) Translates to: TTGDPGASSNLD*FRAATLPSGIS Trigger: AGAGATACCCGATGGGAGTGTTGCTGCCCTAAAGCAATCAAGATTAGAAGATGCTCCGGGATCCCCCGTCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 72 bp | GCGCCTTCTGCCGAAGAGAGCTTTCTTCTTTCTTCCTaGGGTGCAGCGTTCAAAATGCAGTTCAAAGTCGCC | + |
Preference number: 6 (lower is better) Translates to: APSAEESFLLSS*GAAFKMQFKVA Trigger: GGCGACTTTGAACTGCATTTTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | AAGCTTCAGCCAGGGCGGTATTCTCAAACCACTGCATaGCAAGGTCATTCCTCTGCCTTCCCACAGACATTC | + |
Preference number: 6 (lower is better) Translates to: KLQPGRYSQTTA*QGHSSAFPQTF Trigger: GAATGTCTGTGGGAAGGCAGAGGAATGACCTTGCCATGCAGTGGTTTGAGAATACCGCCCTGGCTGAAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | GGCCGTCTGTTACTCTCGTCTTCTTTGTGGAGGAGCTaGGTTCTGAGCCTCTTCGTTCAGGTTTCTCAAGTC | + |
Preference number: 6 (lower is better) Translates to: GRLLLSSSLWRS*VLSLFVQVSQV Trigger: GACTTGAGAAACCTGAACGAAGAGGCTCAGAACCCAGCTCCTCCACAAAGAAGACGAGAGTAACAGACGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | TTCAAAATGCAGTTCAAAGTCGCCAGAGTCTCCTGCTaGATGGAGGGCTTCACGGAATCTTCTGCCACCAGG | + |
Preference number: 6 (lower is better) Translates to: FKMQFKVARVSC*MEGFTESSATR Trigger: CCTGGTGGCAGAAGATTCCGTGAAGCCCTCCATTCAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | CCCTTCTCTGGTTGCCAAGCCTGTTGTTCAGGAAATTaGGGAACTGCCGACAGTCCGTCTCAAATTCCCGAT | + |
Preference number: 6 (lower is better) Translates to: PFSGCQACCSGN*GTADSPSQIPD Trigger: ATCGGGAATTTGAGACGGACTGTCGGCAGTTCCTCAATTTCCTGAACAACAGGCTTGGCAACCAGAGAAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | TCCAGGTACTCTAAGGAAGATGGACCGCTGGATGGGTaGGGACTTCGGGGTTCTATTTTCTGTGTAGATGCC | + |
Preference number: 6 (lower is better) Translates to: SRYSKEDGPLDG*GLRGSIFCVDA Trigger: GGCATCTACACAGAAAATAGAACCCCGAAGTCCTCACCCATCCAGCGGTCCATCTTCCTTAGAGTACCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141292.9 |
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CDS GCA 72 bp | CTGCTGGCTATAGTCGCCCACAGTCAAGATCGTCCTTaGCAATTCTTTCATAAGACAGCATGCGCCTTCTGC | + |
Preference number: 6 (lower is better) Translates to: LLAIVAHSQDRP*QFFHKTACAFC Trigger: GCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGGACGATCTTGACTGTGGGCGACTATAGCCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | AGAACCATTTACACTTCCTGGCATGTCTTCTTGAGATaGAGTAGAAGTGTCTGTCACGACGGGGGATCCCGG | + |
Preference number: 6 (lower is better) Translates to: RTIYTSWHVFLR*SRSVCHDGGSR Trigger: CCGGGATCCCCCGTCGTGACAGACACTTCTACTCCATCTCAAGAAGACATGCCAGGAAGTGTAAATGGTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | AACCTCTCCAGCGTGTCTAGTCTGCACGTGTGTATCTaGTTCCAAAGTCTTATTAGGCAAGCTGGCGCTTCC | + |
Preference number: 6 (lower is better) Translates to: NLSSVSSLHVCI*FQSLIRQAGAS Trigger: GGAAGCGCCAGCTTGCCTAATAAGACTTTGGAACCAGATACACACGTGCAGACTAGACACGCTGGAGAGGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | ACCCTTCTCTGGTTGCCAAGCCTGTTGTTCAGGAAATaGAGGAACTGCCGACAGTCCGTCTCAAATTCCCGA | + |
Preference number: 6 (lower is better) Translates to: TLLWLPSLLFRK*RNCRQSVSNSR Trigger: TCGGGAATTTGAGACGGACTGTCGGCAGTTCCTCAATTTCCTGAACAACAGGCTTGGCAACCAGAGAAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 90 bp | CTCCCATCGGGTATCTCTCTGTGTCCCAAGTTTTCTAGCTTGTGCTaGAAGCTGCTGTTCCCCATGAATGACTCTCGGTTCACAATCTCG | + |
Preference number: 6 (lower is better) Translates to: LPSGISLCPKFSSLC*KLLFPMNDSRFTIS Trigger: CGAGATTGTGAACCGAGAGTCATTCATGGGGAACAGCAGCTTCAAGCACAAGCTAGAAAACTTGGGACACAGAGAGATACCCGATGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 72 bp | GCTTTCTTCTTTCTTCCTGGGGTGCAGCGTTCAAAATaGAGTTCAAAGTCGCCAGAGTCTCCTGCTGAATGG | + |
Preference number: 6 (lower is better) Translates to: AFFFLPGVQRSK*SSKSPESPAEW Trigger: CCATTCAGCAGGAGACTCTGGCGACTTTGAACTGCATTTTGAACGCTGCACCCCAGGAAGAAAGAAGAAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 72 bp | CCTTGCCAATTCTTTCATAAGACAGCATGCGCCTTCTaGCGAAGAGAGCTTTCTTCTTTCTTCCTGGGGTGC | + |
Preference number: 6 (lower is better) Translates to: PCQFFHKTACAF*RRELSSFFLGC Trigger: GCACCCCAGGAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 72 bp | GGGGAGAGTGGTAGGATCCGTAGGGAACTGACTCTCTaGTTCTTCCTCTGGGAATATGTTCTTAGGGATTTC | + |
Preference number: 6 (lower is better) Translates to: GESGRIRRELTL*FFLWEYVLRDF Trigger: GAAATCCCTAAGAACATATTCCCAGAGGAAGAAGCAGAGAGTCAGTTCCCTACGGATCCTACCACTCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 72 bp | TCGGGTATCTCTCTGTGTCCCAAGTTTTCTAGCTTGTaGTTGAAGCTGCTGTTCCCCATGAATGACTCTCGG | + |
Preference number: 6 (lower is better) Translates to: SGISLCPKFSSL*LKLLFPMNDSR Trigger: CCGAGAGTCATTCATGGGGAACAGCAGCTTCAAGCACAAGCTAGAAAACTTGGGACACAGAGAGATACCCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS GCA 72 bp | GGACAGAGCTGTGAAACCTCTCCAGCGTGTCTAGTCTaGACGTGTGTATCTGGTTCCAAAGTCTTATTAGGC | + |
Preference number: 6 (lower is better) Translates to: GQSCETSPACLV*TCVSGSKVLLG Trigger: GCCTAATAAGACTTTGGAACCAGATACACACGTGCAGACTAGACACGCTGGAGAGGTTTCACAGCTCTGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | TCAAACCAGGAAACCATCTTTGGGATCAGTCCTTGCTaGATAAGCAAAGGTTCCTCGTGGTCTGGGTCATCC | + |
Preference number: 6 (lower is better) Translates to: SNQETIFGISPC*ISKGSSWSGSS Trigger: GGATGACCCAGACCACGAGGAACCTTTGCTTATCCAGCAAGGACTGATCCCAAAGATGGTTTCCTGGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | ATCTCCAGGCTCCCTTTACTCACACCAGGCACCGTCTaGACATTAAAGCAGCGAGTTATTAAGCATCGGTCA | + |
Preference number: 6 (lower is better) Translates to: ISRLPLLTPGTV*TLKQRVIKHRS Trigger: TGACCGATGCTTAATAACTCGCTGCTTTAATGTCCAGACGGTGCCTGGTGTGAGTAAAGGGAGCCTGGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | CGGAATCTTCTGCCACCAGGAATCCTAAACGAAGTATaGAGGAATCCAACATCTGGACTGTCGCTTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: RNLLPPGILNEV*RNPTSGLSLSC Trigger: GCAGGAAAGCGACAGTCCAGATGTTGGATTCCTTCATACTTCGTTTAGGATTCCTGGTGGCAGAAGATTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | CAGTCCTTGCTGGATAAGCAAAGGTTCCTCGTGGTCTaGGTCATCCCTGAAGAATCTCTGGATACATTTCAG | + |
Preference number: 6 (lower is better) Translates to: QSLLDKQRFLVV*VIPEESLDTFQ Trigger: CTGAAATGTATCCAGAGATTCTTCAGGGATGACCCAGACCACGAGGAACCTTTGCTTATCCAGCAAGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | AGGGCATTAGTCAGCAGCGCCTCCGAGGCCAGCACTTaGGTGATCAGTAATCCTGTTATTATTTCAAACCAG | + |
Preference number: 6 (lower is better) Translates to: RALVSSASEAST*VISNPVIISNQ Trigger: CTGGTTTGAAATAATAACAGGATTACTGATCACCAAAGTGCTGGCCTCGGAGGCGCTGCTGACTAATGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | GGTATCTCTCTGTGTCCCAAGTTTTCTAGCTTGTGCTaGAAGCTGCTGTTCCCCATGAATGACTCTCGGTTC | + |
Preference number: 6 (lower is better) Translates to: GISLCPKFSSLC*KLLFPMNDSRF Trigger: GAACCGAGAGTCATTCATGGGGAACAGCAGCTTCAAGCACAAGCTAGAAAACTTGGGACACAGAGAGATACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CAA 72 bp | CCATCGGGTATCTCTCTGTGTCCCAAGTTTTCTAGCTaGTGCTTGAAGCTGCTGTTCCCCATGAATGACTCT | + |
Preference number: 6 (lower is better) Translates to: PSGISLCPKFSS*CLKLLFPMNDS Trigger: AGAGTCATTCATGGGGAACAGCAGCTTCAAGCACAAGCTAGAAAACTTGGGACACAGAGAGATACCCGATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CAA 90 bp | AAGTCTTCCAGGGCATTAGTCAGCAGCGCCTCCGAGGCCAGCACTTaGGTGATCAGTAATCCTGTTATTATTTCAAACCAGGAAACCATC | + |
Preference number: 6 (lower is better) Translates to: KSSRALVSSASEAST*VISNPVIISNQETI Trigger: GATGGTTTCCTGGTTTGAAATAATAACAGGATTACTGATCACCAAAGTGCTGGCCTCGGAGGCGCTGCTGACTAATGCCCTGGAAGACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | AAAGCAGAACCATTTACACTTCCTGGCATGTCTTCTTaGGATGGAGTAGAAGTGTCTGTCACGACGGGGGAT | + |
Preference number: 6 (lower is better) Translates to: KAEPFTLPGMSS*DGVEVSVTTGD Trigger: ATCCCCCGTCGTGACAGACACTTCTACTCCATCTCAAGAAGACATGCCAGGAAGTGTAAATGGTTCTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS TCA 72 bp | TGTTACTCTCGTCTTCTTTGTGGAGGAGCTGGGTTCTaGGCCTCTTCGTTCAGGTTTCTCAAGTCCTATTTT | + |
Preference number: 6 (lower is better) Translates to: CYSRLLCGGAGF*ASSFRFLKSYF Trigger: AAAATAGGACTTGAGAAACCTGAACGAAGAGGCTCAGAACCCAGCTCCTCCACAAAGAAGACGAGAGTAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 72 bp | CAAGATCGTCCTTGCCAATTCTTTCATAAGACAGCATaGGCCTTCTGCCGAAGAGAGCTTTCTTCTTTCTTC | + |
Preference number: 6 (lower is better) Translates to: QDRPCQFFHKTA*AFCRRELSSFF Trigger: GAAGAAAGAAGAAAGCTCTCTTCGGCAGAAGGCGCATGCTGTCTTATGAAAGAATTGGCAAGGACGATCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS GCA 72 bp | TGGTTGCCAAGCCTGTTGTTCAGGAAATTGAGGAACTaGCGACAGTCCGTCTCAAATTCCCGATTCTTAATT | + |
Preference number: 6 (lower is better) Translates to: WLPSLLFRKLRN*RQSVSNSRFLI Trigger: AATTAAGAATCGGGAATTTGAGACGGACTGTCGGCAGTTCCTCAATTTCCTGAACAACAGGCTTGGCAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 90 bp | CTGGTTCATCTTGTTTTGAGTTTTCAAGTGAACGTTCTTCTGTATTaGTTATCTCCAGGCTCCCTTTACTCACACCAGGCACCGTCTGGA | + |
Preference number: 6 (lower is better) Translates to: LVHLVLSFQVNVLLY*LSPGSLYSHQAPSG Trigger: TCCAGACGGTGCCTGGTGTGAGTAAAGGGAGCCTGGAGATAACAAATACAGAAGAACGTTCACTTGAAAACTCAAAACAAGATGAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | GGTTCTGGGTCCAGGATCGTTCATTGGTACTTAAACTaGAATCTTCATTACTCTCCAAGAGGTCATGGTTCC | + |
Preference number: 6 (lower is better) Translates to: GSGSRIVHWYLN*NLHYSPRGHGS Trigger: GGAACCATGACCTCTTGGAGAGTAATGAAGATTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 72 bp | AGGAATCCTAAACGAAGTATGAAGGAATCCAACATCTaGACTGTCGCTTTCCTGCTATGTCTGGAAATGATC | + |
Preference number: 6 (lower is better) Translates to: RNPKRSMKESNI*TVAFLLCLEMI Trigger: GATCATTTCCAGACATAGCAGGAAAGCGACAGTCCAGATGTTGGATTCCTTCATACTTCGTTTAGGATTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | GATGAACTTGACCATGGCTTCCTTCAAAAGTTTTACTaGCTCCCACAGAGCACTCTCTGCATTATCTATGTA | + |
Preference number: 6 (lower is better) Translates to: DELDHGFLQKFY*LPQSTLCIIYV Trigger: TACATAGATAATGCAGAGAGTGCTCTGTGGGAGCCAGTAAAACTTTTGAAGGAAGCCATGGTCAAGTTCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | GAAGGCCGTTTTAAAAGCAGAACCATTTACACTTCCTaGCATGTCTTCTTGAGATGGAGTAGAAGTGTCTGT | + |
Preference number: 6 (lower is better) Translates to: EGRFKSRTIYTS*HVFLRWSRSVC Trigger: ACAGACACTTCTACTCCATCTCAAGAAGACATGCCAGGAAGTGTAAATGGTTCTGCTTTTAAAACGGCCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | TTCTTCCTCTGGGAATATGTTCTTAGGGATTTCCTTTaGTGGTTCTGGGTCCAGGATCGTTCATTGGTACTT | + |
Preference number: 6 (lower is better) Translates to: FFLWEYVLRDFL*WFWVQDRSLVL Trigger: AAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAACATATTCCCAGAGGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CAA 90 bp | GTTCTTAGGGATTTCCTTTTGTGGTTCTGGGTCCAGGATCGTTCATaGGTACTTAAACTTGAATCTTCATTACTCTCCAAGAGGTCATGG | + |
Preference number: 6 (lower is better) Translates to: VLRDFLLWFWVQDRS*VLKLESSLLSKRSW Trigger: CCATGACCTCTTGGAGAGTAATGAAGATTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CAA 90 bp | ACTCTCTGCTTCTTCCTCTGGGAATATGTTCTTAGGGATTTCCTTTaGTGGTTCTGGGTCCAGGATCGTTCATTGGTACTTAAACTTGAA | + |
Preference number: 6 (lower is better) Translates to: TLCFFLWEYVLRDFL*WFWVQDRSLVLKLE Trigger: TTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAACATATTCCCAGAGGAAGAAGCAGAGAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 72 bp | AATCTCTGGATACATTTCAGCAGCAGGGAACAATTCTaGAACTCGTTCTTATCCAGCTCCTCTTTTATCAGT | + |
Preference number: 6 (lower is better) Translates to: NLWIHFSSREQF*NSFLSSSSFIS Trigger: ACTGATAAAAGAGGAGCTGGATAAGAACGAGTTCCAGAATTGTTCCCTGCTGCTGAAATGTATCCAGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CAA 72 bp | CTTGTTTTGAGTTTTCAAGTGAACGTTCTTCTGTATTaGTTATCTCCAGGCTCCCTTTACTCACACCAGGCA | + |
Preference number: 6 (lower is better) Translates to: LVLSFQVNVLLY*LSPGSLYSHQA Trigger: TGCCTGGTGTGAGTAAAGGGAGCCTGGAGATAACAAATACAGAAGAACGTTCACTTGAAAACTCAAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124093.3 |
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CDS CCA 72 bp | TGGGAATATGTTCTTAGGGATTTCCTTTTGTGGTTCTaGGTCCAGGATCGTTCATTGGTACTTAAACTTGAA | + |
Preference number: 6 (lower is better) Translates to: WEYVLRDFLLWF*VQDRSLVLKLE Trigger: TTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAATCCCTAAGAACATATTCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |
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CDS CCA 72 bp | ATTTCCTTTTGTGGTTCTGGGTCCAGGATCGTTCATTaGTACTTAAACTTGAATCTTCATTACTCTCCAAGA | + |
Preference number: 6 (lower is better) Translates to: ISFCGSGSRIVH*YLNLNLHYSPR Trigger: TCTTGGAGAGTAATGAAGATTCAAGTTTAAGTACCAATGAACGATCCTGGACCCAGAACCACAAAAGGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124093.3 ENSMUST00000141292.9 |