Pregenerated sensors for SYCP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060445Ensembl transcript IDs: ENSMUST00000081134.10, ENSMUST00000138175.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTGTGCTTGACTAAGAAACTACTTCACCACTGTAATATTAAATGCTaGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTT | + |
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Preference number: 1 (lower is better) Translates to: LCLTKKLLHHCNIKC*YCSNTLQPSDWYYL Trigger: AAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAATATTACAGTGGTGAAGTAGTTTCTTAGTCAAGCACAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACGTGCTTAGAAAGAAATaGCAAGCAGCCTGCTTTGTA | + |
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Preference number: 2 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDVLRKK*QAACFV Trigger: TACAAAGCAGGCTGCTTGCCATTTCTTTCTAAGCAC...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACATAGAGGTGCTTAGATaGTGCATCTTTGCAAAGCTA | + |
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Preference number: 2 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDIEVLR*CIFAKL Trigger: TAGCTTTGCAAAGATGCATCATCTAAGCACCTCTAT...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR GCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAAAATGGCAAGCAGCCTaGTTTGTAGTTAAGACTTCT | + |
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Preference number: 2 (lower is better) Translates to: MALMFAGRTEFEVSQVYTKWQAA*FVVKTS Trigger: AGAAGTCTTAACTACAAAGCAGGCTGCTTGCCATTT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACCATACAAGCTGCATTTaGAGTCATGTTTTTCATCTC | + |
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Preference number: 2 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDHTSCI*SHVFHL Trigger: GAGATGAAAAACATGACTCCAAATGCAGCTTGTATG...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR GCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTATTAAATGCTGGTATTaGTCAAATACTCTACAGCCT | + |
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Preference number: 2 (lower is better) Translates to: HLFGPMALMFAGRTEFEVIKCWY*SNTLQP Trigger: AGGCTGTAGAGTATTTGAGCAATACCAGCATTTAAT...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGAGCTCCTTTTACTGTTaGCTCATAGGACATACAAGC | + |
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Preference number: 3 (lower is better) Translates to: NAGIAQILYSLQIGITFKSSFYC*LIGHTS Trigger: GCTTGTATGTCCTATGAGCAAACAGTAAAAGGAGCT...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR CCA 72 bp | AAAATATTAGGTGAATACCAGGTGCTTAGAAAGAAATaGCAAGCAGCCTGCTTTGTAGTTAAGACTTCTACA | + |
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Preference number: 3 (lower is better) Translates to: KILGEYQVLRKK*QAACFVVKTST Trigger: TGTAGAAGTCTTAACTACAAAGCAGGCTGCTTGCCATTTCTTTCTAAGCACCTGGTATTCACCTAATATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR-3UTR CAA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCACATACAAGCTGCATTaGGAGTCATGTTTTTCATCT | + |
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Preference number: 3 (lower is better) Translates to: LNAGIAQILYSLQIGITFTYKLH*ESCFSS Trigger: AGATGAAAAACATGACTCCAAATGCAGCTTGTATGT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR GCA 72 bp | AAACTACTTCACCACTGTAATATTAAATGCTGGTATTaGTCAAATACTCTACAGCCTTCAGATTGGTATTAC | + |
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Preference number: 3 (lower is better) Translates to: KLLHHCNIKCWY*SNTLQPSDWYY Trigger: GTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAATATTACAGTGGTGAAGTAGTTT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR GCA 72 bp | TTGACTAAGAAACTACTTCACCACTGTAATATTAAATaGTGGTATTGCTCAAATACTCTACAGCCTTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: LTKKLLHHCNIK*WYCSNTLQPSD Trigger: ATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAATATTACAGTGGTGAAGTAGTTTCTTAGTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACTCCAGCAATGTAGAATaGCAGAGTGTGGCTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDSSNVE*QSVAPK Trigger: CTTGGGAGCCACACTCTGTCATTCTACATTGCTGGA...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACTTTCTTCAGGTACAGTaGCAGCTTCCCATTGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDFLQVQ*QLPIGD Trigger: ATCACCAATGGGAAGCTGTCACTGTACCTGAAGAAA...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAATTTATTGCTTGCAGTaGTTCCCTACTTCTTCGCGG | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTIYCLQ*FPTSSR Trigger: CCGCGAAGAAGTAGGGAACCACTGCAAGCAATAAAT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTTTTTGTTGCTCTTCGTaGAAGTCTGGTTCTCCCATC | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVFCCSS*KSGSPI Trigger: GATGGGAGAACCAGACTTCCACGAAGAGCAACAAAA...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTGGCAGTTTCTTTGTTTaGGCTCTGGAATGGATAGTC | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVGSFFV*ALEWIV Trigger: GACTATCCATTCCAGAGCCCAAACAAAGAAACTGCC...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTACCAGGGCACAGATTTaGGGTATGAAACTTTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVTRAQI*GMKLSN Trigger: ATTGGAAAGTTTCATACCTCAAATCTGTGCCCTGGT...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACGCAAAAATTCACTCTTaGATCAATAACCAGGGCACA | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDAKIHS*INNQGT Trigger: TGTGCCCTGGTTATTGATTCAAGAGTGAATTTTTGC...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGAATCCACTGCCATCCTaGGGCTCCTTCAGTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKNPLPS*GSFSFL Trigger: AAGAAAACTGAAGGAGCCTCAGGATGGCAGTGGATT...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTACGTTGACTGGGACCTaGTACATGAGTATTTTCACT | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVTLTGT*YMSIFT Trigger: AGTGAAAATACTCATGTATCAGGTCCCAGTCAACGT...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTACAGGTGTCCAACATaGCCATCTGGAGTGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKYRCPT*PSGVCC Trigger: ACAACACACTCCAGATGGGCATGTTGGACACCTGTA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCTTGAGAGGTCATTaGCATCAGATGTTGTTGAGT | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVSLRGH*HQMLLS Trigger: ACTCAACAACATCTGATGGCAATGACCTCTCAAGCT...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTCTCTTGTTTTGCATATaGTTGTCACAGCTCTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVLLFCI*LSQLSG Trigger: TCCAGAGAGCTGTGACAACCATATGCAAAACAAGAG...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACTGCCATTTACCAAGTTaGGAAATATTCTGCAATCTG | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDCHLPS*EIFCNL Trigger: CAGATTGCAGAATATTTCTCAACTTGGTAAATGGCA...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACTCTCTAGTTGTAGCTTaGAATTCTTGGATTCCAAGT | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDSLVVA*NSWIPS Trigger: ACTTGGAATCCAAGAATTTCAAGCTACAACTAGAGA...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGCATCATTTCCTTCATaGGCCTTGAATAATGACTGT | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTASFPS*ALNNDC Trigger: ACAGTCATTATTCAAGGCTCATGAAGGAAATGATGC...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCCCTGGCTGCTGCTATTaGCTAGTTCTAGAGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFPGCCY*LVLEGL Trigger: TAAACCCTCTAGAACTAGGCAATAGCAGCAGCCAGG...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAAGAACTTCCTCTTCATaGATCTCCTTAAGTAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTRTSSS*ISLSSL Trigger: CAAGCTACTTAAGGAGATGCATGAAGAGGAAGTTCT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAAGATGTTTTGGCAACTaGAATACCTTGTTTTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTRCFGN*NTLFSG Trigger: ACCAGAAAACAAGGTATTTCAGTTGCCAAAACATCT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACATCATACTGTTTTTATTaGGTACCATTGTGGGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTSYCFY*VPLWVL Trigger: CAAGACCCACAATGGTACTCAATAAAAACAGTATGA...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACGTTTTTCTGTTCTTCTaGTGGCTGTCCTTTCAGCGC | + |
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Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHVFLFF*WLSFQR Trigger: GCGCTGAAAGGACAGCCATCAGAAGAACAGAAAAAC...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAACAGAATTTATTGCTTaGAGTGGTTCCCTACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTTEFIA*SGSLLL Trigger: AAGAAGTAGGGAACCACTGCAAGCAATAAATTCTGT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTTTTTGAAAATCCACTaGCATCCTGAGGCTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKFLKIH*HPEAPS Trigger: TGAAGGAGCCTCAGGATGGCAGTGGATTTTCAAAAA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACGCAGTAGTTTTGTTATaGTTGGCTCTATTATTCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDAVVLL*LALLFH Trigger: ATGGAATAATAGAGCCAACCATAACAAAACTACTGC...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGTTTGGGCTCTGGAATaGATAGTCTCCTCCTTTGTT | + |
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Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFVWALE*IVSSFV Trigger: AACAAAGGAGGAGACTATCCATTCCAGAGCCCAAAC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGCTCAAGTTTTTCATCTaGTGGTATCTGCAGCTCATA | + |
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Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKLKFFI*WYLQLI Trigger: TATGAGCTGCAGATACCATCAGATGAAAAACTTGAG...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGCGGTGTTGATGTGTTaGTTAAAAGTATTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFAVLMC*LKVLGF Trigger: GAAGCCCAATACTTTTAATCAACACATCAACACCGC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAATGGAGATGCTGCATaGTTTCCCTCTCTCTTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFNGDAA*FPSLLF Trigger: AAACAAGAGAGAGGGAAATCATGCAGCATCTCCATT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTTTCTTGTTGACATCATaGTATCACTTGGGTTATATC | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVFLLTS*YHLGYI Trigger: GATATAACCCAAGTGATAGCATGATGTCAACAAGAA...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR GCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACCCCTCTCTCTTGTTTTaGATATGGTTGTCACAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHPSLLF*IWLSQL Trigger: GAGCTGTGACAACCATATGCAAAACAAGAGAGAGGG...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTCAGGAAACCATCTTTTaGACTAATCCTTGTTTTATC | + |
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Preference number: 4 (lower is better) Translates to: HLFGPMALMFAGRTEFEVQETIF*TNPCFI Trigger: GATAAAACAAGGATTAGTCCAAAAGATGGTTTCCTG...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGTTGTCACAGCTCTCTaGAGATTCAGGTTCCATATA | + |
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Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFVVTAL*RFRFHI Trigger: TATATGGAACCTGAATCTCCAGAGAGCTGTGACAAC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CCA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACATCTAGGAGAGTGACTTaGAATTTCTCAACATTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MALMFAGRTEFEVSQVYTSRRVT*NFSTFS Trigger: TGAAAATGTTGAGAAATTCCAAGTCACTCTCCTAGA...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| 3UTR CAA 72 bp | AAATATGATCCAAGGAAAGTCAGCTCCTTTTACTGTTaGCTCATAGGACATACAAGCTGCATTTGGAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: KYDPRKVSSFYC*LIGHTSCIWSH Trigger: ATGACTCCAAATGCAGCTTGTATGTCCTATGAGCAAACAGTAAAAGGAGCTGACTTTCCTTGGATCATATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTTTAAAGCCTCCTGCTaGATGCAAAAATTCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKFKASC*MQKFTL Trigger: AAGAGTGAATTTTTGCATTCAGCAGGAGGCTTTAAA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCATTTTGTTGGCATCTTaGGGTATTCTGTCAAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFILLAS*GILSSI Trigger: GATGCTTGACAGAATACCTCAAGATGCCAACAAAAT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCCTTCAGTTTTCTTGTTaGCATCATGCTATCACTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFLQFSC*HHAITW Trigger: CCAAGTGATAGCATGATGTCAACAAGAAAACTGAAG...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR GCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGTCTACTTTTCCCACTaGAGAAGATACATTAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFVYFSH*RRYIRE Trigger: CTCTCTAATGTATCTTCTGCAGTGGGAAAAGTAGAC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR GCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTCTCTGAGCTATTACTaGTTACATCTGAATAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKSLSYY*LHLNSC Trigger: ACAGCTATTCAGATGTAAGCAGTAATAGCTCAGAGA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR GCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACATGTTCCCTTTCTTCTaGCTCTTCTACTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHMFPFF*LFYFCF Trigger: GAAGCAGAAGTAGAAGAGGCAGAAGAAAGGGAACAT...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACGAGGTTTTCTTTGACTaGAGATGGTTGACTTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHEVFFD*RWLTFW Trigger: CCAGAAAGTCAACCATCTCCAGTCAAAGAAAACCTC...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| 3UTR CAA 72 bp | CTTTTACTGTTTGCTCATAGGACATACAAGCTGCATTaGGAGTCATGTTTTTCATCTCTAACATTTGAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLFAHRTYKLH*ESCFSSLTFES Trigger: CGACTCAAATGTTAGAGATGAAAAACATGACTCCAAATGCAGCTTGTATGTCCTATGAGCAAACAGTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR TCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTGTTTTATCATGGTTTaGAGTCCAGCTTGTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHCFIMV*SPACPN Trigger: ATTGGGACAAGCTGGACTTCAAACCATGATAAAACA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCTGTCCTCAATTTCATTaGAATTTTGGTCTGGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFCPQFH*NFGLGI Trigger: AATCCCCAGACCAAAATTTCAATGAAATTGAGGACA...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR TCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGCCATCAGATGTTGTTaGGTCAATTTCAATGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFAIRCC*VNFNVF Trigger: AAAGACATTGAAATTGACTCAACAACATCTGATGGC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CCA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGGTTGTCCTTTTTCCATaGATGATCTTGATTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NAGIAQILYSLQIGITFKVVLFP*MILIFY Trigger: GTAGAAAATCAAGATCATCCATGGAAAAAGGACAAC...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR TCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACAGCAATAAAGTCCATTaGAAACCATTCATATGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHSNKVH*KPFICQ Trigger: CTGGCATATGAATGGTTTTCAATGGACTTTATTGCT...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCATTGAAATTTTGGTCTaGGGATTCATTATCCTCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFIEILV*GFIILV Trigger: TACGAGGATAATGAATCCCCAGACCAAAATTTCAAT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CCA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCCATCATGCTATCACTTaGGTTATATCTCCTACTAAT | + |
|
Preference number: 4 (lower is better) Translates to: LNAGIAQILYSLQIGITFHHAIT*VISPTN Trigger: ATTAGTAGGAGATATAACCCAAGTGATAGCATGATG...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACCATGAGTATTTTCACTaGGCATGTCAAACCACATTT | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHHEYFH*ACQTTF Trigger: AAATGTGGTTTGACATGCCCAGTGAAAATACTCATG...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR GCA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACGTTTCAGATTCAATATaGCAATCACTCTTCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHVSDSI*QSLFFA Trigger: TGCAAAGAAGAGTGATTGGCATATTGAATCTGAAAC...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | TTATTTTCTCTGTACATCTCATCACTTCCACAGAGGACGAGCTCCTaGACACAGACGCAGAAGACAGGCACAGACTGTCTTCTCTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSLYISSLPQRTSS*TQTQKTGTDCLLSL Trigger: AAGGGAGAGAAGACAGTCTGTGCCTGTCTTCTGCGTCTGTGTCCAGGAGCTCGTCCTCTGTGGAAGTGATGAGATGTACAGAGAAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | CCAGTATCTTGGGTACAAGTGTCTCCAGGTAAAGCACGGCTTCTCTaGTTATTGCAGAGTTTGATAGTTGTTACAGGTGTCCAACATGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVSWVQVSPGKARLL*LLQSLIVVTGVQHA Trigger: GGCATGTTGGACACCTGTAACAACTATCAAACTCTGCAATAACCAGAGAAGCCGTGCTTTACCTGGAGACACTTGTACCCAAGATACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | GCTCATCATCTTCTAGGTACATCCGCCTTTTGCTACCACGTTGACTaGGACCTGATACATGAGTATTTTCACTGGGCATGTCAAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: AHHLLGTSAFCYHVD*DLIHEYFHWACQTT Trigger: TGTGGTTTGACATGCCCAGTGAAAATACTCATGTATCAGGTCCCAGTCAACGTGGTAGCAAAAGGCGGATGTACCTAGAAGATGATGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACCCAGGCAATACAGGCTaGTCTACTTTTCCCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDPGNTG*STFPTA Trigger: TGCAGTGGGAAAAGTAGACAAGCCTGTATTGCCTGG...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACAGTGACAGCTTCCCATaGGTGATCTTCTTCATCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDSDSFP*VIFFIS Trigger: GGAGATGAAGAAGATCACCAATGGGAAGCTGTCACT...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTGGGCAGTTTCTTTGTTaGGGCTCTGGAATGGATAGT | + |
|
Preference number: 5 (lower is better) Translates to: HLFGPMALMFAGRTEFEVGQFLC*GSGMDS Trigger: ACTATCCATTCCAGAGCCCAAACAAAGAAACTGCCC...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAAGTCCTCTGCGTATGTaGAGAACTTCCTCTTCATGC | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTSPLRM*RTSSSC Trigger: GCATGAAGAGGAAGTTCTCAACATACGCAGAGGACT...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 90 bp | TTATTGCTTGCAGTGGTTCCCTACTTCTTCGCGGTGTTGATGTGTTaGTTAAAAGTATTGGGCTTCGCACAGTGTATCTGTCTGTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLLAVVPYFFAVLMC*LKVLGFAQCICLYQ Trigger: CTGATACAGACAGATACACTGTGCGAAGCCCAATACTTTTAATCAACACATCAACACCGCGAAGAAGTAGGGAACCACTGCAAGCAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 90 bp | AGTTTTTCTGTTCTTCTGATGGCTGTCCTTTCAGCGCTTCTGAATTaGAGACTTTCTGTTGTTTCTCGGGCAGTTTCTTTGTTTGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFSVLLMAVLSALLN*RLSVVSRAVSLFGL Trigger: GAGCCCAAACAAAGAAACTGCCCGAGAAACAACAGAAAGTCTTCAATTCAGAAGCGCTGAAAGGACAGCCATCAGAAGAACAGAAAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTCCTGGCTGCTGCTATaGCCTAGTTCTAGAGGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKSWLLL*PSSRGF Trigger: AAACCCTCTAGAACTAGGCAATAGCAGCAGCCAGGA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACACAGCTAATGTCAGTCTaGCTGTCATCACATCCACAT | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTQLMSV*LSSHPH Trigger: ATGTGGATGTGATGACAGCAAGACTGACATTAGCTG...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CAA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACCAGGTGATGGAGCTTTaGGATAAGGTGAAAGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDQVMEL*DKVKEI Trigger: AATCTCTTTCACCTTATCCAAAAGCTCCATCACCTG...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS CCA 90 bp | GATGCTTCAGACATTTTCTTTCTGCTAGGTGTAGTGATCTCATCCTaGCTGCTGCTATTGCCTAGTTCTAGAGGGTTTACAAGTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: DASDIFFLLGVVISS*LLLLPSSRGFTSFF Trigger: AAAGAAACTTGTAAACCCTCTAGAACTAGGCAATAGCAGCAGCCAGGATGAGATCACTACACCTAGCAGAAAGAAAATGTCTGAAGCATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | GCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACAGACTTGTTTTATCATGGTTaGAAGTCCAGCTTGTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALMFAGRTEFEVSQVYTDLFYHG*KSSLSQ Trigger: TTGGGACAAGCTGGACTTCAAACCATGATAAAACAA...GTCTGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACACGCGGTGTTGATGTGTaGATTAAAAGTATTGGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTRGVDV*IKSIGL Trigger: AAGCCCAATACTTTTAATCAACACATCAACACCGCG...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTCGGCTTCTCTGGTTATaGCAGAGTTTGATAGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: HLFGPMALMFAGRTEFEVRLLWL*QSLIVV Trigger: AACAACTATCAAACTCTGCAATAACCAGAGAAGCCG...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACATTGTTTTGCATATGGTaGTCACAGCTCTCTGGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTLFCIW*SQLSGD Trigger: ATCTCCAGAGAGCTGTGACAACCATATGCAAAACAA...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 90 bp | CTCTCACTTCAATGTTGTACATCTGAACTTTTTCTTCAGGTACAGTaGCAGCTTCCCATTGGTGATCTTCTTCATCTCCAGCAATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSLQCCTSELFLQVQ*QLPIGDLLHLQQCR Trigger: TCTACATTGCTGGAGATGAAGAAGATCACCAATGGGAAGCTGTCACTGTACCTGAAGAAAAAGTTCAGATGTACAACATTGAAGTGAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 90 bp | TATTGGGCTTCGCACAGTGTATCTGTCTGTATCAGGAACAATCATTaGTGCTTCAGACATTTTCTTTCTGCTAGGTGTAGTGATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: YWASHSVSVCIRNNH*CFRHFLSARCSDLI Trigger: GATGAGATCACTACACCTAGCAGAAAGAAAATGTCTGAAGCATCAATGATTGTTCCTGATACAGACAGATACACTGTGCGAAGCCCAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACATTGCGGAGGAATTGTTaGCTGCATTTAATCTTCACA | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTLRRNC*LHLIFT Trigger: TGTGAAGATTAAATGCAGCAAACAATTCCTCCGCAA...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 90 bp | TTTCTCAACATTTTCATCCCTGCGTCCCTGAGCTTGAGAGGTCATTaGCATCAGATGTTGTTGAGTCAATTTCAATGTCTTTGTAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLNIFIPASLSLRGH*HQMLLSQFQCLCSK Trigger: TTTACTACAAAGACATTGAAATTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGACGCAGGGATGAAAATGTTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | CCATTGAAAACCATTCATATGCCAGTTCTTGTCTCCGTTTTTCTGTaGTCATTCTACACAAAGCTTCCACAATGCCTACCTGTAATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLKTIHMPVLVSVFL*SFYTKLPQCLPVIH Trigger: ATGAATTACAGGTAGGCATTGTGGAAGCTTTGTGTAGAATGACCACAGAAAAACGGAGACAAGAACTGGCATATGAATGGTTTTCAATGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | AGGTTCATCGGCACCATTCAAGCTGAAATTATATACATCATCCAGTaGACATTCAGAAGTAACATTGACAACAGTTGCCTTCAGTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFIGTIQAEIIYIIQ*TFRSNIDNSCLQFP Trigger: AGGAAACTGAAGGCAACTGTTGTCAATGTTACTTCTGAATGTCCACTGGATGATGTATATAATTTCAGCTTGAATGGTGCCGATGAACCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTGAATCTGTGATCCACTaGCATCAAAAAGTACATGAA | + |
|
Preference number: 5 (lower is better) Translates to: HLFGPMALMFAGRTEFEVESVIH*HQKVHE Trigger: TTCATGTACTTTTTGATGCAAGTGGATCACAGATTC...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTAGCCAGGTCTACACATGTTTAGTGCATTTTTaGTTGACACCAGTATCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MALMFAGRTEFEVSQVYTCLVHF*LTPVSW Trigger: CCAAGATACTGGTGTCAACAAAAAATGCACTAAACA...TGTGTAGACCTGGCTAACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCTCCCTCTCTCTTGTTTaGCATATGGTTGTCACAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LNAGIAQILYSLQIGITFSLSLV*HMVVTA Trigger: AGCTGTGACAACCATATGCAAAACAAGAGAGAGGGA...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CATTTGTTTGGGCCCATGGCTTTAATGTTTGCAGGCAGAACTGAATTTGAGGTTTCTACTTCTGCTTCATaGGAATTACTTAGCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HLFGPMALMFAGRTEFEVSTSAS*ELLSSS Trigger: TGATGAGCTAAGTAATTCCAATGAAGCAGAAGTAGA...AACCTCAAATTCAGTTCTGCCTGCAAACATTAAAGCCATGGGCCCAAACAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACGAGCTTGAGAGGTCATaGCCATCAGATGTTGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHELERS*PSDVVE Trigger: CTCAACAACATCTGATGGCAATGACCTCTCAAGCTC...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 90 bp | CTTTCTGATGTTTTAGAAACAGCTTTCTCCACAGAATTTATTGCTTaGAGTGGTTCCCTACTTCTTCGCGGTGTTGATGTGTTGATTAAA | + |
|
Preference number: 5 (lower is better) Translates to: LSDVLETAFSTEFIA*SGSLLLRGVDVLIK Trigger: TTTAATCAACACATCAACACCGCGAAGAAGTAGGGAACCACTGCAAGCAATAAATTCTGTGGAGAAAGCTGTTTCTAAAACATCAGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 90 bp | AATAATGACTGTAGTCCTCTGCGTATGTTGAGAACTTCCTCTTCATaGATCTCCTTAAGTAGCTTGTCTTGTAGCATTTTCATGTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NNDCSPLRMLRTSSS*ISLSSLSCSIFMFA Trigger: AGCAAACATGAAAATGCTACAAGACAAGCTACTTAAGGAGATGCATGAAGAGGAAGTTCTCAACATACGCAGAGGACTACAGTCATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | ACTTTCTGTTGTTTCTCGGGCAGTTTCTTTGTTTGGGCTCTGGAATaGATAGTCTCCTCCTTTGTTGGCAGTTTATCTTTAAACAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: TFCCFSGSFFVWALE*IVSSFVGSLSLNKY Trigger: ATATTTGTTTAAAGATAAACTGCCAACAAAGGAGGAGACTATCCATTCCAGAGCCCAAACAAAGAAACTGCCCGAGAAACAACAGAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGCAACTTGCGGAGGAATaGTTTGCTGCATTTAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKQLAEE*FAAFNL Trigger: AAGATTAAATGCAGCAAACAATTCCTCCGCAAGTTG...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTCTCCACAGAATTTATaGCTTGCAGTGGTTCCCTAC | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHSPQNL*LAVVPY Trigger: GTAGGGAACCACTGCAAGCAATAAATTCTGTGGAGA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGGTGTCCTCAATTTCATaGAAATTTTGGTCTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKVSSIS*KFWSGD Trigger: ATCCCCAGACCAAAATTTCAATGAAATTGAGGACAC...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGCATTCAGAAGTAACATaGACAACAGTTGCCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKHSEVT*TTVAFS Trigger: ACTGAAGGCAACTGTTGTCAATGTTACTTCTGAATG...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGGGTTTGAAGTCCAGCTaGTCCCAATATAAAGATATT | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKGLKSS*SQYKDI Trigger: AATATCTTTATATTGGGACAAGCTGGACTTCAAACC...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTTCATATGCCAGTTCTaGTCTCCGTTTTTCTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHFICQF*SPFFCG Trigger: ACCACAGAAAAACGGAGACAAGAACTGGCATATGAA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCGAGTCAGTAGCTTCTTaGATTCTCTCACTTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LNAGIAQILYSLQIGITFESVAS*ILSLQC Trigger: ACATTGAAGTGAGAGAATCAAAGAAGCTACTGACTC...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | AATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCAAGTTCTCTAGTTGTAGCTaGAAATTCTTGGATTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: NAGIAQILYSLQIGITFKFSSCS*KFLDSK Trigger: CTTGGAATCCAAGAATTTCAAGCTACAACTAGAGAA...CTTGAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCATTGAAGACTTTCTGTaGTTTCTCGGGCAGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LNAGIAQILYSLQIGITFIEDFL*FLGQFL Trigger: AAGAAACTGCCCGAGAAACAACAGAAAGTCTTCAAT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 90 bp | TCTCTGGAGATTCAGGTTCCATATAAAGTTTCTCTGAGCTATTACTaGTTACATCTGAATAGCTGTTACAATGTTGGGTTCTCTGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLEIQVPYKVSLSYY*LHLNSCYNVGFSDY Trigger: ATAATCAGAGAACCCAACATTGTAACAGCTATTCAGATGTAAGCAGTAATAGCTCAGAGAAACTTTATATGGAACCTGAATCTCCAGAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | TTAAATGCTGGTATTGCTCAAATACTCTACAGCCTTCAGATTGGTATTACCTTCATGACAGCAGTAGTTTaGTTATGGTTGGCTCTATTA | + |
|
Preference number: 5 (lower is better) Translates to: LNAGIAQILYSLQIGITFMTAVV*LWLALL Trigger: TAATAGAGCCAACCATAACAAAACTACTGCTGTCAT...GAAGGTAATACCAATCTGAAGGCTGTAGAGTATTTGAGCAATACCAGCATTTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTGGTTATTGCAGAGTTaGATAGTTGTTACAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHWLLQS*IVVTGV Trigger: GACACCTGTAACAACTATCAAACTCTGCAATAACCA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 90 bp | ACCAATTTTAATGAATTATCCATACTGGCTTCTCTAGTTGTAGCTTaGAATTCTTGGATTCCAAGTTTTATAACAGGTTCATCGGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TNFNELSILASLVVA*NSWIPSFITGSSAP Trigger: TGGTGCCGATGAACCTGTTATAAAACTTGGAATCCAAGAATTTCAAGCTACAACTAGAGAAGCCAGTATGGATAATTCATTAAAATTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 90 bp | AGATACATTAGAGAGAGTGTCCTCAATTTCATTGAAATTTTGGTCTaGGGATTCATTATCCTCGTATTGTTTGTTTTGTATGACAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RYIRESVLNFIEILV*GFIILVLFVLYDSS Trigger: ACTGCTGTCATACAAAACAAACAATACGAGGATAATGAATCCCCAGACCAAAATTTCAATGAAATTGAGGACACTCTCTCTAATGTATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTATTTTGTTGGCATCTaGAGGTATTCTGTCAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHYFVGI*RYSVKH Trigger: ATGCTTGACAGAATACCTCAAGATGCCAACAAAATA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACTCTGCTTCATCTGACTaGTTACACTTGATTACATCT | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHSASSD*LHLITS Trigger: AGATGTAATCAAGTGTAACAAGTCAGATGAAGCAGA...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACGCCAATCACTCTTCTTaGCATTTGCAGTATTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHANHSS*HLQYFS Trigger: AGAAAAATACTGCAAATGCAAAGAAGAGTGATTGGC...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACCGACCTACAACGCTATaGTTTCCATTTAAGAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHRPTTL*FPFKNS Trigger: TGAATTCTTAAATGGAAACAATAGCGTTGTAGGTCG...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS-3UTR CAA 90 bp | CAATTGAATACACCAAGAATGTATTTGTGCTTGACTAAGAAACTACTTCACCACATCTCCTTAAGTAGCTaGTCTTGTAGCATTTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: QLNTPRMYLCLTKKLLHHISLSS*SCSIFM Trigger: CATGAAAATGCTACAAGACAAGCTACTTAAGGAGAT...GTGGTGAAGTAGTTTCTTAGTCAAGCACAAATACATTCTTGGTGTATTCAATTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 90 bp | CAAGTGTCTCCAGGTAAAGCACGGCTTCTCTGGTTATTGCAGAGTTaGATAGTTGTTACAGGTGTCCAACATGCCCATCTGGAGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: QVSPGKARLLWLLQS*IVVTGVQHAHLECV Trigger: AACACACTCCAGATGGGCATGTTGGACACCTGTAACAACTATCAAACTCTGCAATAACCAGAGAAGCCGTGCTTTACCTGGAGACACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 90 bp | TCTTGGGTACAAGTGTCTCCAGGTAAAGCACGGCTTCTCTGGTTATaGCAGAGTTTGATAGTTGTTACAGGTGTCCAACATGCCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWVQVSPGKARLLWL*QSLIVVTGVQHAHL Trigger: CAGATGGGCATGTTGGACACCTGTAACAACTATCAAACTCTGCAATAACCAGAGAAGCCGTGCTTTACCTGGAGACACTTGTACCCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 72 bp | GTACATCCGCCTTTTGCTACCACGTTGACTGGGACCTaGTACATGAGTATTTTCACTGGGCATGTCAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: VHPPFATTLTGT*YMSIFTGHVKP Trigger: TGGTTTGACATGCCCAGTGAAAATACTCATGTATCAGGTCCCAGTCAACGTGGTAGCAAAAGGCGGATGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 72 bp | CTTCTAGGTACATCCGCCTTTTGCTACCACGTTGACTaGGACCTGATACATGAGTATTTTCACTGGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: LLGTSAFCYHVD*DLIHEYFHWAC Trigger: ACATGCCCAGTGAAAATACTCATGTATCAGGTCCCAGTCAACGTGGTAGCAAAAGGCGGATGTACCTAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | CCAGGTAAAGCACGGCTTCTCTGGTTATTGCAGAGTTaGATAGTTGTTACAGGTGTCCAACATGCCCATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PGKARLLWLLQS*IVVTGVQHAHL Trigger: CAGATGGGCATGTTGGACACCTGTAACAACTATCAAACTCTGCAATAACCAGAGAAGCCGTGCTTTACCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 72 bp | GCAGTGGTTCCCTACTTCTTCGCGGTGTTGATGTGTTaGTTAAAAGTATTGGGCTTCGCACAGTGTATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: AVVPYFFAVLMC*LKVLGFAQCIC Trigger: ACAGATACACTGTGCGAAGCCCAATACTTTTAATCAACACATCAACACCGCGAAGAAGTAGGGAACCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 72 bp | AAGACTTTCTGTTGTTTCTCGGGCAGTTTCTTTGTTTaGGCTCTGGAATGGATAGTCTCCTCCTTTGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: KTFCCFSGSFFV*ALEWIVSSFVG Trigger: GCCAACAAAGGAGGAGACTATCCATTCCAGAGCCCAAACAAAGAAACTGCCCGAGAAACAACAGAAAGTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | CTGCTAGGTGTAGTGATCTCATCCTGGCTGCTGCTATaGCCTAGTTCTAGAGGGTTTACAAGTTTCTTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLGVVISSWLLL*PSSRGFTSFFW Trigger: CCAAAAGAAACTTGTAAACCCTCTAGAACTAGGCAATAGCAGCAGCCAGGATGAGATCACTACACCTAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | GAAGACTTTCTGTTGTTTCTCGGGCAGTTTCTTTGTTaGGGCTCTGGAATGGATAGTCTCCTCCTTTGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: EDFLLFLGQFLC*GSGMDSLLLCW Trigger: CCAACAAAGGAGGAGACTATCCATTCCAGAGCCCAAACAAAGAAACTGCCCGAGAAACAACAGAAAGTCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 72 bp | TCCACTGCCATCCTGAGGCTCCTTCAGTTTTCTTGTTaGCATCATGCTATCACTTGGGTTATATCTCCTACT | + |
|
Preference number: 6 (lower is better) Translates to: STAILRLLQFSC*HHAITWVISPT Trigger: AGTAGGAGATATAACCCAAGTGATAGCATGATGTCAACAAGAAAACTGAAGGAGCCTCAGGATGGCAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 72 bp | GTTCTTCTGATGGCTGTCCTTTCAGCGCTTCTGAATTaGAGACTTTCTGTTGTTTCTCGGGCAGTTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLMAVLSALLN*RLSVVSRAVSL Trigger: CAAAGAAACTGCCCGAGAAACAACAGAAAGTCTTCAATTCAGAAGCGCTGAAAGGACAGCCATCAGAAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 72 bp | TACTTAGCTCATCATCTTCTAGGTACATCCGCCTTTTaGTACCACGTTGACTGGGACCTGATACATGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: YLAHHLLGTSAF*YHVDWDLIHEY Trigger: ATACTCATGTATCAGGTCCCAGTCAACGTGGTAGCAAAAGGCGGATGTACCTAGAAGATGATGAGCTAAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 72 bp | GACATTTTCTTTCTGCTAGGTGTAGTGATCTCATCCTaGCTGCTGCTATTGCCTAGTTCTAGAGGGTTTACA | + |
|
Preference number: 6 (lower is better) Translates to: DIFFLLGVVISS*LLLLPSSRGFT Trigger: TGTAAACCCTCTAGAACTAGGCAATAGCAGCAGCCAGGATGAGATCACTACACCTAGCAGAAAGAAAATGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | CAAGTGTCTCCAGGTAAAGCACGGCTTCTCTGGTTATaGCAGAGTTTGATAGTTGTTACAGGTGTCCAACAT | + |
|
Preference number: 6 (lower is better) Translates to: QVSPGKARLLWL*QSLIVVTGVQH Trigger: ATGTTGGACACCTGTAACAACTATCAAACTCTGCAATAACCAGAGAAGCCGTGCTTTACCTGGAGACACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | GAATTTCTCAACATTTTCATCCCTGCGTCCCTGAGCTaGAGAGGTCATTGCCATCAGATGTTGTTGAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: EFLNIFIPASLS*RGHCHQMLLSQ Trigger: TTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGACGCAGGGATGAAAATGTTGAGAAATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 72 bp | GTTTTAGAAACAGCTTTCTCCACAGAATTTATTGCTTaGAGTGGTTCCCTACTTCTTCGCGGTGTTGATGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLETAFSTEFIA*SGSLLLRGVDV Trigger: CACATCAACACCGCGAAGAAGTAGGGAACCACTGCAAGCAATAAATTCTGTGGAGAAAGCTGTTTCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS GCA 72 bp | ATTTTCATCCCTGCGTCCCTGAGCTTGAGAGGTCATTaGCATCAGATGTTGTTGAGTCAATTTCAATGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: IFIPASLSLRGH*HQMLLSQFQCL Trigger: AAGACATTGAAATTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGACGCAGGGATGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | AAAATCCACTGCCATCCTGAGGCTCCTTCAGTTTTCTaGTTGACATCATGCTATCACTTGGGTTATATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KIHCHPEAPSVF*LTSCYHLGYIS Trigger: GGAGATATAACCCAAGTGATAGCATGATGTCAACAAGAAAACTGAAGGAGCCTCAGGATGGCAGTGGATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 90 bp | TTTATTGCTTGCAGTGGTTCCCTACTTCTTCGCGGTGTTGATGTGTaGATTAAAAGTATTGGGCTTCGCACAGTGTATCTGTCTGTATCA | + |
|
Preference number: 6 (lower is better) Translates to: FIACSGSLLLRGVDV*IKSIGLRTVYLSVS Trigger: TGATACAGACAGATACACTGTGCGAAGCCCAATACTTTTAATCAACACATCAACACCGCGAAGAAGTAGGGAACCACTGCAAGCAATAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | GCGTCCCTGAGCTTGAGAGGTCATTGCCATCAGATGTaGTTGAGTCAATTTCAATGTCTTTGTAGTAAAATC | + |
|
Preference number: 6 (lower is better) Translates to: ASLSLRGHCHQM*LSQFQCLCSKI Trigger: GATTTTACTACAAAGACATTGAAATTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGACGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 90 bp | ATCCCTGCGTCCCTGAGCTTGAGAGGTCATTGCCATCAGATGTTGTaGAGTCAATTTCAATGTCTTTGTAGTAAAATCATCCATGATTTT | + |
|
Preference number: 6 (lower is better) Translates to: IPASLSLRGHCHQML*SQFQCLCSKIIHDF Trigger: AAAATCATGGATGATTTTACTACAAAGACATTGAAATTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGACGCAGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | ATCCATACTGGCTTCTCTAGTTGTAGCTTGAAATTCTaGGATTCCAAGTTTTATAACAGGTTCATCGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: IHTGFSSCSLKF*DSKFYNRFIGT Trigger: GGTGCCGATGAACCTGTTATAAAACTTGGAATCCAAGAATTTCAAGCTACAACTAGAGAAGCCAGTATGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | TTTGTTTTTGGTTCTTTTAGCCAGCTAATGTCAGTCTaGCTGTCATCACATCCACATTCGGTTTCAGTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: FVFGSFSQLMSV*LSSHPHSVSVS Trigger: TGACACTGAAACCGAATGTGGATGTGATGACAGCAAGACTGACATTAGCTGGCTAAAAGAACCAAAAACAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS TCA 72 bp | AGCTTCTTTGATTCTCTCACTTCAATGTTGTACATCTaGACTTTTTCTTCAGGTACAGTGACAGCTTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SFFDSLTSMLYI*TFSSGTVTASH Trigger: ATGGGAAGCTGTCACTGTACCTGAAGAAAAAGTTCAGATGTACAACATTGAAGTGAGAGAATCAAAGAAGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CCA 72 bp | GGCACCATTCAAGCTGAAATTATATACATCATCCAGTaGACATTCAGAAGTAACATTGACAACAGTTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GTIQAEIIYIIQ*TFRSNIDNSCL Trigger: AAGGCAACTGTTGTCAATGTTACTTCTGAATGTCCACTGGATGATGTATATAATTTCAGCTTGAATGGTGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | TTGGTCTGGGGATTCATTATCCTCGTATTGTTTGTTTaGTATGACAGCAGTAGTTTTGTTATGGTTGGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LVWGFIILVLFV*YDSSSFVMVGS Trigger: AGAGCCAACCATAACAAAACTACTGCTGTCATACAAAACAAACAATACGAGGATAATGAATCCCCAGACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | TCCCTGAGCTTGAGAGGTCATTGCCATCAGATGTTGTaGAGTCAATTTCAATGTCTTTGTAGTAAAATCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLSLRGHCHQML*SQFQCLCSKII Trigger: GATGATTTTACTACAAAGACATTGAAATTGACTCAACAACATCTGATGGCAATGACCTCTCAAGCTCAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
||
| CDS CAA 72 bp | GCAGAAGATACATTAGAGAGAGTGTCCTCAATTTCATaGAAATTTTGGTCTGGGGATTCATTATCCTCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: AEDTLERVSSIS*KFWSGDSLSSY Trigger: ATACGAGGATAATGAATCCCCAGACCAAAATTTCAATGAAATTGAGGACACTCTCTCTAATGTATCTTCTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS CAA 90 bp | TTTCCCACTGCAGAAGATACATTAGAGAGAGTGTCCTCAATTTCATaGAAATTTTGGTCTGGGGATTCATTATCCTCGTATTGTTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: FPTAEDTLERVSSIS*KFWSGDSLSSYCLF Trigger: AAACAAACAATACGAGGATAATGAATCCCCAGACCAAAATTTCAATGAAATTGAGGACACTCTCTCTAATGTATCTTCTGCAGTGGGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS GCA 72 bp | ATTCAGGTTCCATATAAAGTTTCTCTGAGCTATTACTaGTTACATCTGAATAGCTGTTACAATGTTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: IQVPYKVSLSYY*LHLNSCYNVGF Trigger: GAACCCAACATTGTAACAGCTATTCAGATGTAAGCAGTAATAGCTCAGAGAAACTTTATATGGAACCTGAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS CAA 72 bp | CTGCATATTAAGTCATCCAACTTGCGGAGGAATTGTTaGCTGCATTTAATCTTCACATCTTCACAAATATCA | + |
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Preference number: 6 (lower is better) Translates to: LHIKSSNLRRNC*LHLIFTSSQIS Trigger: TGATATTTGTGAAGATGTGAAGATTAAATGCAGCAAACAATTCCTCCGCAAGTTGGATGACTTAATATGCAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000081134.10 ENSMUST00000138175.2 |
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| CDS CAA 72 bp | TCATCATCTGATACTGATTTTTGTTTAGTGCATTTTTaGTTGACACCAGTATCTTGGGTACAAGTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSDTDFCLVHF*LTPVSWVQVSP Trigger: TGGAGACACTTGTACCCAAGATACTGGTGTCAACAAAAAATGCACTAAACAAAAATCAGTATCAGATGATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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| CDS CAA 72 bp | TACATTAGAGAGAGTGTCCTCAATTTCATTGAAATTTaGGTCTGGGGATTCATTATCCTCGTATTGTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: YIRESVLNFIEI*VWGFIILVLFV Trigger: AACAAACAATACGAGGATAATGAATCCCCAGACCAAAATTTCAATGAAATTGAGGACACTCTCTCTAATGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000081134.10 |
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