Pregenerated sensors for SYBU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022340Ensembl transcript IDs: ENSMUST00000090057.6, ENSMUST00000110267.9, ENSMUST00000110269.8, ENSMUST00000226214.2, ENSMUST00000227305.2, ENSMUST00000228057.2, ENSMUST00000228639.2
Found 531 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | ACGTCGGTCTGCACGGCTTGCTCCATCACCGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCCTTGAGGGCTTGTGGCCCTGGAGTG | + |
Preference number: 1 (lower is better) Translates to: TSVCTACSITAMPSS*LTKGRALRACGPGV Trigger: CACTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGCGGTGATGGAGCAAGCCGTGCAGACCGACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | TCTGAGATGGCAGGGCTGAACGGCACCACGTCGGTCTGCACGGCTTaGTCCATCACCGCAATGCCCTCTTCGTGGCTCACCAAGGGGAGA | + |
Preference number: 1 (lower is better) Translates to: SEMAGLNGTTSVCTA*SITAMPSSWLTKGR Trigger: TCTCCCCTTGGTGAGCCACGAAGAGGGCATTGCGGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 90 bp | CCATCACCGCAATGCCCTCTTCGTGGCTCACCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAGTGGAATGAACAAACTCCAGGCCAC | + |
Preference number: 1 (lower is better) Translates to: PSPQCPLRGSPRGEP*GLVALEWNEQTPGH Trigger: GTGGCCTGGAGTTTGTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGCGGTGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | TTGGGGATGGTGGGCTGCTGCCAGACTTGTGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTCGGTTGCGTGAGAAAGAGGCTCTCT | + |
Preference number: 1 (lower is better) Translates to: LGMVGCCQTCGMMLH*SAHEGLGCVRKRLS Trigger: AGAGAGCCTCTTTCTCACGCAACCGAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | GAGGGCCTCGGTTGCGTGAGAAAGAGGCTCTCTTGTTTCCTGTCGTaGACATGTGGACCTCAGGAGCCGAGATGCTGCCTGTGCTGCTCG | + |
Preference number: 1 (lower is better) Translates to: EGLGCVRKRLSCFLS*TCGPQEPRCCLCCS Trigger: CGAGCAGCACAGGCAGCATCTCGGCTCCTGAGGTCCACATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTCACGCAACCGAGGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 90 bp | GGGCTGCTGCCAGACTTGTGGGATGATGCTCCATTGCTCCGCCCATaGGGGCCTCGGTTGCGTGAGAAAGAGGCTCTCTTGTTTCCTGTC | + |
Preference number: 1 (lower is better) Translates to: GLLPDLWDDAPLLRP*GPRLREKEALLFPV Trigger: GACAGGAAACAAGAGAGCCTCTTTCTCACGCAACCGAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 90 bp | CTCACCAAGGGGAGAGCCTTGAGGGCTTGTGGCCCTGGAGTGGAATaGACAAACTCCAGGCCACTGGATTCTGTGGTGGTGGCAGTCACC | + |
Preference number: 1 (lower is better) Translates to: LTKGRALRACGPGVE*TNSRPLDSVVVAVT Trigger: GGTGACTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | CGGTTGCGTGAGAAAGAGGCTCTCTTGTTTCCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATGCTGCCTGTGCTGCTCGAGGAGCTA | + |
Preference number: 1 (lower is better) Translates to: RLREKEALLFPVVDM*TSGAEMLPVLLEEL Trigger: TAGCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGGTCCACATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTCACGCAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | CTCTTCGTGGCTCACCAAGGGGAGAGCCTTGAGGGCTTGTGGCCCTaGAGTGGAATGAACAAACTCCAGGCCACTGGATTCTGTGGTGGT | + |
Preference number: 1 (lower is better) Translates to: LFVAHQGESLEGLWP*SGMNKLQATGFCGG Trigger: ACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGTGAGCCACGAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | GTACCACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTGAGAGGA | + |
Preference number: 1 (lower is better) Translates to: VPQGQPQPVDPPRNC*SSTASQHCPGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGTGGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | TGGGTACCACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTGAGA | + |
Preference number: 1 (lower is better) Translates to: WVPQGQPQPVDPPRN*CSSTASQHCPGTVR Trigger: TCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGTGGTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | ACTTGTGGGATGATGCTCCATTGCTCCGCCCATGAGGGCCTCGGTTaGGTGAGAAAGAGGCTCTCTTGTTTCCTGTCGTGGACATGTGGA | + |
Preference number: 1 (lower is better) Translates to: TCGMMLHCSAHEGLG*VRKRLSCFLSWTCG Trigger: TCCACATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTCACGCAACCGAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCCACAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | GCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGGGACAGTGAGAGGACACTGTCCAAT | + |
Preference number: 1 (lower is better) Translates to: AATASRSTKKLLLQY*LTTLPWDSERTLSN Trigger: ATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | GCCCTGGAGTGGAATGAACAAACTCCAGGCCACTGGATTCTGTGGTaGTGGCAGTCACCATCTCATCTAACAGATCTGTGCCTTCAGCCA | + |
Preference number: 1 (lower is better) Translates to: ALEWNEQTPGHWILW*WQSPSHLTDLCLQP Trigger: TGGCTGAAGGCACAGATCTGTTAGATGAGATGGTGACTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTCCAGGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | TCTCATGAGGCGATTTGCATGGGCTTCCATAGCCCCCTTGCTGAATaGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTAGGACTTCT | + |
Preference number: 1 (lower is better) Translates to: SHEAICMGFHSPLAE*DLHRRQKDGRVRTS Trigger: AGAAGTCCTAACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGCTATGGAAGCCCATGCAAATCGCCTCATGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | TGGTGGCAGTCACCATCTCATCTAACAGATCTGTGCCTTCAGCCATaGTGTCTCCCACCAGAAGCTCACTGTCAGCACCTTCCTCTGTTA | + |
Preference number: 1 (lower is better) Translates to: WWQSPSHLTDLCLQP*CLPPEAHCQHLPLL Trigger: TAACAGAGGAAGGTGCTGACAGTGAGCTTCTGGTGGGAGACAGCATGGCTGAAGGCACAGATCTGTTAGATGAGATGGTGACTGCCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | CTGGAGTGGAATGAACAAACTCCAGGCCACTGGATTCTGTGGTGGTaGCAGTCACCATCTCATCTAACAGATCTGTGCCTTCAGCCATGC | + |
Preference number: 1 (lower is better) Translates to: LEWNEQTPGHWILWW*QSPSHLTDLCLQPC Trigger: GCATGGCTGAAGGCACAGATCTGTTAGATGAGATGGTGACTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CCA 90 bp | AGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTaGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAAAATACCT | + |
Preference number: 1 (lower is better) Translates to: RQHGRGISMLSTPLW*DSYQNQVSMPWKIP Trigger: AGGTATTTTCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTaGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAAAATA | + |
Preference number: 1 (lower is better) Translates to: LRQHGRGISMLSTPL*WDSYQNQVSMPWKI Trigger: TATTTTCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR TCA 90 bp | GAAATTGCTGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCTTTCTTCTGTGTAGGCTGCAAAATC | + |
Preference number: 1 (lower is better) Translates to: EIAAPVLPHNTALGQ*EDTVQSFFCVGCKI Trigger: GATTTTGCAGCCTACACAGAAGAAAGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | GAACCACAATGGTCGAGTTATAGCCCAGTGGGAAAACACTTACCTTaGATTTGTAAGGCTCAAGGCTCAAGGCTCAAGGCTTTAGGTTCA | + |
Preference number: 1 (lower is better) Translates to: EPQWSSYSPVGKHLP*ICKAQGSRLKALGS Trigger: TGAACCTAAAGCCTTGAGCCTTGAGCCTTGAGCCTTACAAATGCAAGGTAAGTGTTTTCCCACTGGGCTATAACTCGACCATTGTGGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 90 bp | TGCAGAGGAGTCAAATACTGTTCTGGATTTGGGGGTTTGACACCGTaGTTTTCGCCACAAGACATGTATCTTCCAGACCTTCTCATGACT | + |
Preference number: 1 (lower is better) Translates to: CRGVKYCSGFGGLTP*FSPQDMYLPDLLMT Trigger: AGTCATGAGAAGGTCTGGAAGATACATGTCTTGTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAGAACAGTATTTGACTCCTCTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 90 bp | CACAGTTCATCCCTCAGGGAACTATTGTGTGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTTATGTCCACA | + |
Preference number: 1 (lower is better) Translates to: HSSSLRELLCAISML*SRDSSFLFWMFMST Trigger: TGTGGACATAAACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACAATAGTTCCCTGAGGGATGAACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | GCCTGTGCTTATTTATATTGCTCTTTCCCAGCAAGGAGTCCAGGATaGTTTGGCAAAAGAAGCTCTGTATCTCACATTGGTCCAATTTGC | + |
Preference number: 1 (lower is better) Translates to: ACAYLYCSFPARSPG*FGKRSSVSHIGPIC Trigger: GCAAATTGGACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACTCCTTGCTGGGAAAGAGCAATATAAATAAGCACAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 90 bp | ATTGGTGAGCTCTGGGCCAATGGGAGATTCTATTTTAGACGTGCATaGTACCTAAGGTTTTTCTCTGAACATCACACACATGAGCACACA | + |
Preference number: 1 (lower is better) Translates to: IGELWANGRFYFRRA*YLRFFSEHHTHEHT Trigger: TGTGTGCTCATGTGTGTGATGTTCAGAGAAAAACCTTAGGTATCATGCACGTCTAAAATAGAATCTCCCATTGGCCCAGAGCTCACCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR GCA 90 bp | CAAGACACAGTTCATCCCTCAGGGAACTATTGTGTGCCATCTCCATaGTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTTATGT | + |
Preference number: 1 (lower is better) Translates to: QDTVHPSGNYCVPSP*FEAETPVSCFGCLC Trigger: ACATAAACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACAATAGTTCCCTGAGGGATGAACTGTGTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 90 bp | ACTAAAACAGGAAATGCCTGCATCATCTGTTTAGATTTCCAGGCCTaGCTGGGTTATATGAGGGCCCAGTTCAGAAAAACAAATGAACAA | + |
Preference number: 1 (lower is better) Translates to: TKTGNACIICLDFQA*LGYMRAQFRKTNEQ Trigger: TTGTTCATTTGTTTTTCTGAACTGGGCCCTCATATAACCCAGGCAGGCCTGGAAATCTAAACAGATGATGCAGGCATTTCCTGTTTTAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 90 bp | GCAAACATCTTGACAACCTGCTACCCTTGTCTGTATAAGTATCTGTaGGACTTCTTTTTGACATTAGGCAGTTCATGTTCTCCATGTGAG | + |
Preference number: 1 (lower is better) Translates to: ANILTTCYPCLYKYL*DFFLTLGSSCSPCE Trigger: CTCACATGGAGAACATGAACTGCCTAATGTCAAAAAGAAGTCTCACAGATACTTATACAGACAAGGGTAGCAGGTTGTCAAGATGTTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CCA 90 bp | TCAATTCCCAGAGCCCACATGGTGCTCTCTATAACTCTAGTTCCATaGGATCTAACACCTTCACACAGACAAAACACAAATGAAAATAAA | + |
Preference number: 1 (lower is better) Translates to: SIPRAHMVLSITLVP*DLTPSHRQNTNENK Trigger: TTTATTTTCATTTGTGTTTTGTCTGTGTGAAGGTGTTAGATCCCATGGAACTAGAGTTATAGAGAGCACCATGTGGGCTCTGGGAATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 90 bp | ACACATGTATTCATAGGTAGCAACTCTTTAAATAACTACAACAAATaGTTGAAAATTAGAATCAGTGCTGAGGCTCTTCCCCCTGGGCTC | + |
Preference number: 1 (lower is better) Translates to: THVFIGSNSLNNYNK*LKIRISAEALPPGL Trigger: GAGCCCAGGGGGAAGAGCCTCAGCACTGATTCTAATTTTCAATCATTTGTTGTAGTTATTTAAAGAGTTGCTACCTATGAATACATGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR GCA 90 bp | ACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTGCCAGGAGCCGAGATGCTaGCTGTGCTGCTCGAGGAGC | + |
Preference number: 2 (lower is better) Translates to: TGAATASRSTKKLLLQYCQEPRC*LCCSRS Trigger: GCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTG...GCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CAA 90 bp | GTGGGTACCACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATaGCTGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTGAG | + |
Preference number: 2 (lower is better) Translates to: VGTTGAATASRSTKK*LLQYCLTTLPWDSE Trigger: CTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGTGGTACCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | ATCTGTGCCTTCAGCCATGCTGTCTCCCACCAGAAGCTCACTGTCAGCACCTTCGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCC | + |
Preference number: 2 (lower is better) Translates to: ICAFSHAVSHQKLTVSTFARLVG*CSIAPP Trigger: GGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGC...GAAGGTGCTGACAGTGAGCTTCTGGTGGGAGACAGCATGGCTGAAGGCACAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | GCCCCCTTGCTGAATGGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTAGGAAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTC | + |
Preference number: 2 (lower is better) Translates to: APLLNGISTGDRRMAELGSLVLR*LTVTSF Trigger: GAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCT...TCCTAACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | TGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTGAGAGGACACTGTCCAAAGGTCTTTTTCCCTTaGGGATGGTGGGCTGCTGCC | + |
Preference number: 2 (lower is better) Translates to: CSSTASQHCPGTVRGHCPKVFFP*GWWAAA Trigger: GGCAGCAGCCCACCATCCCCAAGGGAAAAAGACCTT...TGGACAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | ACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTGCACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCT | + |
Preference number: 2 (lower is better) Translates to: TGAATASRSTKKLLLQYCTALGQ*EDTVQS Trigger: AGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGT...GCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | GCCCCCTTGCTGAATGGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTAGGAGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCT | + |
Preference number: 2 (lower is better) Translates to: APLLNGISTGDRRMAELGEMLSL*DSSPAA Trigger: AGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTC...TCCTAACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | GATCCACCAAGAAATTGCTGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 2 (lower is better) Translates to: DPPRNCCSSTASQHCPGTTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...TGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR CAA 90 bp | TCTAGCTCTCTCATGAGGCGATTTGCATGGGCTTCCATAGCCCCCTaGCTGAATGGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTA | + |
Preference number: 2 (lower is better) Translates to: SSSLMRRFAWASIAP*LNGISTGDRRMAEL Trigger: TAACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGCTATGGAAGCCCATGCAAATCGCCTCATGAGAGAGCTAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | TGCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTGAGAGGACACTGTCCACGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 2 (lower is better) Translates to: CSSTASQHCPGTVRGHCPRGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...TGGACAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | CATAGCCCCCTTGCTGAATGGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTCATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 2 (lower is better) Translates to: HSPLAEWDLHRRQKDGRVHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...AACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGCTATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCACCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATG | + |
Preference number: 2 (lower is better) Translates to: TDRIETSTDHLLLLYLASPVVDM*TSGAEM Trigger: CATCTCGGCTCCTGAGGTCCACATGTCCACGACAGG...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAG | + |
Preference number: 2 (lower is better) Translates to: QASTDYSANQIARSKTDRPRGEP*GLVALE Trigger: CTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | ACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTGCAGAACCAGGTTTCCATaGCTTGGAAAATACCTCTGG | + |
Preference number: 2 (lower is better) Translates to: TGAATASRSTKKLLLQYCRTRFP*LGKYLW Trigger: CCAGAGGTATTTTCCAAGGCATGGAAACCTGGTTCT...GCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTAGAACCAGGTTTCCATaGCTTGGAAAATACCTCTGG | + |
Preference number: 2 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTRTRFP*LGKYLW Trigger: CCAGAGGTATTTTCCAAGGCATGGAAACCTGGTTCT...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCACAGACTCCTTCAGCTTaGTCCTCAGGTGCCTCACTG | + |
Preference number: 2 (lower is better) Translates to: TDRIETSTDHLLLLYLASQTPSA*SSGASL Trigger: CAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTG...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCAGCGAGAAGCAAAACTaGCAGAATAGAGACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: ACFLHHSGGTATRTRFPCSEKQN*QNRDFH Trigger: GTGGAAGTCTCTATTCTGTCAGTTTTGCTTCTCGCT...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | CTTCCCCCTGGGCTCAATTCCCAGAGCCCACATGGTGCTCTCTATAACTCTAGTGGCAATCAATCATTTTaGACAGTGCTGCTGCTGATG | + |
Preference number: 2 (lower is better) Translates to: LPPGLNSQSPHGALYNSSGNQSF*TVLLLM Trigger: CATCAGCAGCAGCACTGTGCAAAATGATTGATTGCC...ACTAGAGTTATAGAGAGCACCATGTGGGCTCTGGGAATTGAGCCCAGGGGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAAGCGAGAAGCAAAACTaGCAGAATAGAGACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: FLHHSGGTATRTRFPCLGSEKQN*QNRDFH Trigger: GTGGAAGTCTCTATTCTGTCAGTTTTGCTTCTCGCT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR TCA 90 bp | GTGTGCCATCTCCATGCTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTTCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 2 (lower is better) Translates to: VCHLHALKQRLQFLVLDVSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...AACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | ATCTGCAGGAGCTCTTTAGTCCTGCTTGCTGCTCTAACTCTCTACATACTAGCAAGCAAAGATAATTGGTaGGCTCTGGGCCAATGGGAG | + |
Preference number: 2 (lower is better) Translates to: ICRSSLVLLAALTLYILASKDNW*ALGQWE Trigger: CTCCCATTGGCCCAGAGCTCACCAATTATCTTTGCT...TGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR GCA 90 bp | GGTACCACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGACAAGAGCATTGGAATaGTGGAACAATTACACATTT | + |
Preference number: 2 (lower is better) Translates to: GTTGAATASRSTKKLLLQTRALE*WNNYTF Trigger: AAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGT...CTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGTGGTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCATTGGTTACAGTCCCCTaGTATGCACAAGAGCATTGG | + |
Preference number: 2 (lower is better) Translates to: TDRIETSTDHLLLLYLASLVTVP*YAQEHW Trigger: CCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAA...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CCA 90 bp | ACAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTGCTATGCACAAGAGCATTaGAATGCTGGAACAATTACA | + |
Preference number: 2 (lower is better) Translates to: TGAATASRSTKKLLLQYCYAQEH*NAGTIT Trigger: TGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATA...GCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | CTCAAGGCTTTAGGTTCAATTCCCAGCATAATCTTTTGCACTCATCCACTTGGTTCAGCCTGTGTCAGTTaGCTTGTAACCACGCGCATG | + |
Preference number: 2 (lower is better) Translates to: LKALGSIPSIIFCTHPLGSACVS*LVTTRM Trigger: CATGCGCGTGGTTACAAGTCAACTGACACAGGCTGA...ACCAAGTGGATGAGTGCAAAAGATTATGCTGGGAATTGAACCTAAAGCCTTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACATTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 2 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 2 (lower is better) Translates to: QPQDDKELFKSLNQLHKYAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCTTGGTTACAGTCCCCTaGTATGCACAAGAGCATTGG | + |
Preference number: 2 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFLVTVP*YAQEHW Trigger: CCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAA...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | CTTCCCCCTGGGCTCAATTCCCAGAGCCCACATGGTGCTCTCTATAACTCTAGTTACAAATATAAATGTTaGTTGAAGAAGGCCAGAGAG | + |
Preference number: 2 (lower is better) Translates to: LPPGLNSQSPHGALYNSSYKYKC*LKKARE Trigger: CTCTCTGGCCTTCTTCAAGCAACATTTATATTTGTA...ACTAGAGTTATAGAGAGCACCATGTGGGCTCTGGGAATTGAGCCCAGGGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR GCA 90 bp | GTGTGCCATCTCCATGCTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 2 (lower is better) Translates to: VCHLHALKQRLQFLVLDVVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...AACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | TACCGACTGCTAGGATCACAGGTAGGCTCAGTCCAACCTGGTTTATGCAGTGTATTGATGCTTCTGAGATaGGAAGAAAAGTCAGTAGCT | + |
Preference number: 2 (lower is better) Translates to: YRLLGSQVGSVQPGLCSVLMLLR*EEKSVA Trigger: AGCTACTGACTTTTCTTCCCATCTCAGAAGCATCAA...TACACTGCATAAACCAGGTTGGACTGAGCCTACCTGTGATCCTAGCAGTCGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CAA 90 bp | ACACAGTTCATCCCTCAGGGAACTATTGTGTGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTTATGTCCAC | + |
Preference number: 2 (lower is better) Translates to: TQFIPQGTIVCHLHA*KQRLQFLVLDVYVH Trigger: GTGGACATAAACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACAATAGTTCCCTGAGGGATGAACTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCAGCGAGAAGCAAAACTaGCAGAATAGAGACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFSEKQN*QNRDFH Trigger: GTGGAAGTCTCTATTCTGTCAGTTTTGCTTCTCGCT...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAAGCGAGAAGCAAAACTaGCAGAATAGAGACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTSEKQN*QNRDFH Trigger: GTGGAAGTCTCTATTCTGTCAGTTTTGCTTCTCGCT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | ATCTGCAGGAGCTCTTTAGTCCTGCTTGCTGCTCTAACTCTCTACATACTAGCAATGTTTTCTGGCCTCTaGACATTGTGTACCTATCAA | + |
Preference number: 2 (lower is better) Translates to: ICRSSLVLLAALTLYILAMFSGL*TLCTYQ Trigger: TTGATAGGTACACAATGTGCAGAGGCCAGAAAACAT...TGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCATATGCACAAGAGCATTaGAATGCTGGAACAATTACA | + |
Preference number: 2 (lower is better) Translates to: TDRIETSTDHLLLLYLASYAQEH*NAGTIT Trigger: TGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATA...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CCA 90 bp | GAGAAGCTTTCCATCGAGTCAGCTCCAGATTCATCTGGAGATGCTGAGCTTGTGTCCAGTTTCTTGTTTTaGATGTTTATGTCCACAAAG | + |
Preference number: 2 (lower is better) Translates to: EKLSIESAPDSSGDAELVSSFLF*MFMSTK Trigger: CTTTGTGGACATAAACATCCAAAACAAGAAACTGGA...CACAAGCTCAGCATCTCCAGATGAATCTGGAGCTGACTCGATGGAAAGCTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR GCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAACAAGAGCATTGGAATaGTGGAACAATTACACATTT | + |
Preference number: 2 (lower is better) Translates to: TDRIETSTDHLLLLYLASTRALE*WNNYTF Trigger: AAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGT...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 90 bp | GTGCTTATTTATATTGCTCTTTCCCAGCAAGGAGTCCAGGATGCTTaGGCAAAAGAAGCTCTGTATCTCACATTGGTCCAATTTGCATTT | + |
Preference number: 2 (lower is better) Translates to: VLIYIALSQQGVQDA*AKEALYLTLVQFAF Trigger: AAATGCAAATTGGACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACTCCTTGCTGGGAAAGAGCAATATAAATAAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGGCATTTTCTCTTCCTaGACCATTAGTATAAGAACG | + |
Preference number: 2 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTGIFSS*TISIRT Trigger: CGTTCTTATACTAATGGTTCAGGAAGAGAAAATGCC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR TCA 90 bp | GAAGACAACTGTGTTAGATTCCATTCTCAGAGAGTGTCTCAAATACTCCAGGCTTTTAAAATTTCTAAGTaGTTCCTCCTGCTGGTGCAG | + |
Preference number: 2 (lower is better) Translates to: EDNCVRFHSQRVSQILQAFKISK*FLLLVQ Trigger: CTGCACCAGCAGGAGGAATCACTTAGAAATTTTAAA...AGCCTGGAGTATTTGAGACACTCTCTGAGAATGGAATCTAACACAGTTGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 2 (lower is better) Translates to: QPQDDKELFKSLNQLHKYSFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | AGTCCAGGATGCTTTGGCAAAAGAAGCTCTGTATCTCACATTGGTCCAATTTGCAGTAAGGAGGCATTTTaGTTAGATTTGGAAGACAAC | + |
Preference number: 2 (lower is better) Translates to: SPGCFGKRSSVSHIGPICSKEAF*LDLEDN Trigger: GTTGTCTTCCAAATCTAACCAAAATGCCTCCTTACT...GCAAATTGGACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR TCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGGCATTTTCTCTTCCTaGACCATTAGTATAAGAACG | + |
Preference number: 2 (lower is better) Translates to: NYTFSNGTKQSKEITCQPGIFSS*TISIRT Trigger: CGTTCTTATACTAATGGTTCAGGAAGAGAAAATGCC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAGAACCAGGTTTCCATaGCTTGGAAAATACCTCTGG | + |
Preference number: 2 (lower is better) Translates to: QPQDDKELFKSLNQLHKYRTRFP*LGKYLW Trigger: CCAGAGGTATTTTCCAAGGCATGGAAACCTGGTTCT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTTGGTTACAGTCCCCTaGTATGCACAAGAGCATTGG | + |
Preference number: 2 (lower is better) Translates to: YQPQDDKELFKSLNQLHKLVTVP*YAQEHW Trigger: CCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAA...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR GCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAACTTGTCAAATGTGCTaGTCAGGGGTAAACTTTTCT | + |
Preference number: 2 (lower is better) Translates to: QASTDYSANQIARSKTDRTCQMC*SGVNFS Trigger: AGAAAAGTTTACCCCTGAGCAGCACATTTGACAAGT...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR TCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGAGCGAGAAGCAAAACTaGCAGAATAGAGACTTCCAC | + |
Preference number: 2 (lower is better) Translates to: YQPQDDKELFKSLNQLHKSEKQN*QNRDFH Trigger: GTGGAAGTCTCTATTCTGTCAGTTTTGCTTCTCGCT...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACGGCATTTTCTCTTCCTaGACCATTAGTATAAGAACG | + |
Preference number: 2 (lower is better) Translates to: QPQDDKELFKSLNQLHKYGIFSS*TISIRT Trigger: CGTTCTTATACTAATGGTTCAGGAAGAGAAAATGCC...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CCA 90 bp | CCATGCTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTTATGTCCACAAAGAGCATTGGAATGCTaGAACAATTACACATTTTCA | + |
Preference number: 2 (lower is better) Translates to: PCFEAETPVSCFGCLCPQRALEC*NNYTFS Trigger: TGAAAATGTGTAATTGTTCCAGCATTCCAATGCTCT...TTGTGGACATAAACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAGAGCATTGGAATGCTaGAACAATTACACATTTTCA | + |
Preference number: 2 (lower is better) Translates to: QPQDDKELFKSLNQLHKYRALEC*NNYTFS Trigger: TGAAAATGTGTAATTGTTCCAGCATTCCAATGCTCT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR GCA 72 bp | GCAGGGCTGAACGGCACCACGTCGGTCTGCACGGCTTaGTCCATCACCGCAATGCCCTCTTCGTGGCTCACC | + |
Preference number: 3 (lower is better) Translates to: AGLNGTTSVCTA*SITAMPSSWLT Trigger: GGTGAGCCACGAAGAGGGCATTGCGGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCCGTTCAGCCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 72 bp | CCTTGGGGATGGTGGGCTGCTGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCCATGAGGGCCTCGGTT | + |
Preference number: 3 (lower is better) Translates to: PWGWWAAARLVG*CSIAPPMRASV Trigger: AACCGAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 72 bp | TCTGAGATGGCAGGGCTGAACGGCACCACGTCGGTCTaGACGGCTTGCTCCATCACCGCAATGCCCTCTTCG | + |
Preference number: 3 (lower is better) Translates to: SEMAGLNGTTSV*TACSITAMPSS Trigger: CGAAGAGGGCATTGCGGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 72 bp | GTGGGCTGCTGCCAGACTTGTGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTCGGTTGCGTGAGAAAG | + |
Preference number: 3 (lower is better) Translates to: VGCCQTCGMMLH*SAHEGLGCVRK Trigger: CTTTCTCACGCAACCGAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 72 bp | AGTCGGCGCTCAGACTCCTTCAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTCTGCTGCAGAGGAGTC | + |
Preference number: 3 (lower is better) Translates to: SRRSDSFSLVLR*LTVTSFCCRGV Trigger: GACTCCTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGAGCGCCGACT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 72 bp | GGGAGAGCCTTGAGGGCTTGTGGCCCTGGAGTGGAATaGACAAACTCCAGGCCACTGGATTCTGTGGTGGTG | + |
Preference number: 3 (lower is better) Translates to: GRALRACGPGVE*TNSRPLDSVVV Trigger: CACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 72 bp | CAGGGGCAGCCACAGCCAGTAGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCACAACACTGCCCTGGG | + |
Preference number: 3 (lower is better) Translates to: QGQPQPVDPPRN*CSSTASQHCPG Trigger: CCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CAA 90 bp | GACCTCAGGAGCCGAGATGCTGCCTGTGCTGCTCGAGGAGCTAAAATCTGCTTCACTGATCACCTGCTGTaGCTCTACCTGGCATCAGGC | + |
Preference number: 3 (lower is better) Translates to: DLRSRDAACAARGAKICFTDHLL*LYLASG Trigger: GCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGT...GAAGCAGATTTTAGCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 72 bp | TGCTCCATTGCTCCGCCCATGAGGGCCTCGGTTGCGTaGGAAAGAGGCTCTCTTGTTTCCTGTCGTGGACAT | + |
Preference number: 3 (lower is better) Translates to: CSIAPPMRASVA*ERGSLVSCRGH Trigger: ATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTCACGCAACCGAGGCCCTCATGGGCGGAGCAATGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR TCA 72 bp | CAATGCCCTCTTCGTGGCTCACCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAGTGGAATGAACAAACT | + |
Preference number: 3 (lower is better) Translates to: QCPLRGSPRGEP*GLVALEWNEQT Trigger: AGTTTGTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR GCA 72 bp | GGGCAGCCACAGCCAGTAGATCCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAACACTGCCCTGGGACA | + |
Preference number: 3 (lower is better) Translates to: GQPQPVDPPRNC*SSTASQHCPGT Trigger: TGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR GCA 72 bp | GTAGACAGGATCTGTACCCCCTCTCTGAGTACTGAATaGCCACAGAACAGTGGGTACCACAGGGGCAGCCAC | + |
Preference number: 3 (lower is better) Translates to: VDRICTPSLSTE*PQNSGYHRGSH Trigger: GTGGCTGCCCCTGTGGTACCCACTGTTCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGATCCTGTCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR CCA 72 bp | GAGAAAGAGGCTCTCTTGTTTCCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATGCTGCCTGTGCTGCTC | + |
Preference number: 3 (lower is better) Translates to: EKEALLFPVVDM*TSGAEMLPVLL Trigger: GAGCAGCACAGGCAGCATCTCGGCTCCTGAGGTCCACATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTACTGATCACCTGCTGTaGCTCTACCTGGCATCAGGC | + |
Preference number: 3 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTTDHLL*LYLASG Trigger: GCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGT...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CCA 72 bp | GGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTaGGACAGCTACCAGAACCAGGTTTCCATGCCTTGG | + |
Preference number: 3 (lower is better) Translates to: GRGISMLSTPLW*DSYQNQVSMPW Trigger: CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR CCA 72 bp | CACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTaGTGGGACAGCTACCAGAACCAGGTTTCCATGCCT | + |
Preference number: 3 (lower is better) Translates to: HGRGISMLSTPL*WDSYQNQVSMP Trigger: AGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR TCA 72 bp | GCTCCAGTACTGCCTCACAACACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCTTTCTTCTGTGTAGGC | + |
Preference number: 3 (lower is better) Translates to: APVLPHNTALGQ*EDTVQSFFCVG Trigger: GCCTACACAGAAGAAAGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGTACTGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CAA 90 bp | GAGAAGCTTTCCATCGAGTCAGCTCCAGATTCATCTGGAGATGCTGAGCTTGTGGGGCTGCTGCCAGACTaGTGGGATGATGCTCCATTG | + |
Preference number: 3 (lower is better) Translates to: EKLSIESAPDSSGDAELVGLLPD*WDDAPL Trigger: CAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC...CACAAGCTCAGCATCTCCAGATGAATCTGGAGCTGACTCGATGGAAAGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR CCA 72 bp | GCTGCAAAATCTAGCTCTCTCATGAGGCGATTTGCATaGGCTTCCATAGCCCCCTTGCTGAATGGGATCTCC | + |
Preference number: 3 (lower is better) Translates to: AAKSSSLMRRFA*ASIAPLLNGIS Trigger: GGAGATCCCATTCAGCAAGGGGGCTATGGAAGCCCATGCAAATCGCCTCATGAGAGAGCTAGATTTTGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | TGTCTCCCACCAGAAGCTCACTGTCAGCACCTTCCTCTGTTATCTGTTCTTCCATCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 3 (lower is better) Translates to: CLPPEAHCQHLPLLSVLPSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...TGGAAGAACAGATAACAGAGGAAGGTGCTGACAGTGAGCTTCTGGTGGGAGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAACTGATCACCTGCTGTaGCTCTACCTGGCATCAGGC | + |
Preference number: 3 (lower is better) Translates to: TDRIETSTDHLLLLYLASTDHLL*LYLASG Trigger: GCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGT...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR-3UTR CAA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCCAGGTTTCCATGCCTaGGAAAATACCTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTPGFHA*ENTSGL Trigger: TAAACCAGAGGTATTTTCCAAGGCATGGAAACCTGG...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR-3UTR CAA 90 bp | CATAGCCCCCTTGCTGAATGGGATCTCCACAGGAGACAGAAGGATGGCCGAGTTCCAGGTTTCCATGCCTaGGAAAATACCTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: HSPLAEWDLHRRQKDGRVPGFHA*ENTSGL Trigger: TAAACCAGAGGTATTTTCCAAGGCATGGAAACCTGG...AACTCGGCCATCCTTCTGTCTCCTGTGGAGATCCCATTCAGCAAGGGGGCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | CAGCCACAGCCAGTAGATCCACCAAGAAATTGCTGCTCCAGTACTGCCTCACAAGAGAAAGAGGCTCTCTaGTTTCCTGTCGTGGACATG | + |
Preference number: 3 (lower is better) Translates to: QPQPVDPPRNCCSSTASQEKEAL*FPVVDM Trigger: CATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC...TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCTACTGGCTGTGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCACTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 3 (lower is better) Translates to: TDRIETSTDHLLLLYLASLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR CCA 72 bp | TGGAATGAACAAACTCCAGGCCACTGGATTCTGTGGTaGTGGCAGTCACCATCTCATCTAACAGATCTGTGC | + |
Preference number: 3 (lower is better) Translates to: WNEQTPGHWILW*WQSPSHLTDLC Trigger: GCACAGATCTGTTAGATGAGATGGTGACTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR CCA 72 bp | GAGTGGAATGAACAAACTCCAGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCTCATCTAACAGATCTG | + |
Preference number: 3 (lower is better) Translates to: EWNEQTPGHWIL*WWQSPSHLTDL Trigger: CAGATCTGTTAGATGAGATGGTGACTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTGTTCATTCCACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR CCA 72 bp | AGTCAGCTCCAGATTCATCTGGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCTTTAGCACACTCTGAA | + |
Preference number: 3 (lower is better) Translates to: SQLQIHLEMLSL*DSSPAALAHSE Trigger: TTCAGAGTGTGCTAAAGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAGATGAATCTGGAGCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR-3UTR CAA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCACTGATCACCTGCTGTaGCTCTACCTGGCATCAGGC | + |
Preference number: 3 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFTDHLL*LYLASG Trigger: GCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGT...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CAA 90 bp | ATCTGTGCCTTCAGCCATGCTGTCTCCCACCAGAAGCTCACTGTCAGCACCTTCAGAGACTCCAGTTTCTaGTTTTGGATGTTTATGTCC | + |
Preference number: 3 (lower is better) Translates to: ICAFSHAVSHQKLTVSTFRDSSF*FWMFMS Trigger: GGACATAAACATCCAAAACAAGAAACTGGAGTCTCT...GAAGGTGCTGACAGTGAGCTTCTGGTGGGAGACAGCATGGCTGAAGGCACAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
3UTR GCA 72 bp | CAGATCCATCTGCAGGAGCTCTTTAGTCCTGCTTGCTaGTCTAACTCTCTACATACTAGCAGCCATTCAGCT | + |
Preference number: 3 (lower is better) Translates to: QIHLQELFSPAC*SNSLHTSSHSA Trigger: AGCTGAATGGCTGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGATGGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR GCA 72 bp | CACCAGATCCATCTGCAGGAGCTCTTTAGTCCTGCTTaGTGCTCTAACTCTCTACATACTAGCAGCCATTCA | + |
Preference number: 3 (lower is better) Translates to: HQIHLQELFSPA*CSNSLHTSSHS Trigger: TGAATGGCTGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGATGGATCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR GCA 72 bp | TGGTCGAGTTATAGCCCAGTGGGAAAACACTTACCTTaGATTTGTAAGGCTCAAGGCTCAAGGCTCAAGGCT | + |
Preference number: 3 (lower is better) Translates to: WSSYSPVGKHLP*ICKAQGSRLKA Trigger: AGCCTTGAGCCTTGAGCCTTGAGCCTTACAAATGCAAGGTAAGTGTTTTCCCACTGGGCTATAACTCGACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAACTGATCACCTGCTGTaGCTCTACCTGGCATCAGGC | + |
Preference number: 3 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTTDHLL*LYLASG Trigger: GCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CAA 90 bp | TACCGACTGCTAGGATCACAGGTAGGCTCAGTCCAACCTGGTTTATGCAGTGTAATGGAAAGTTCTCCGTaGATGCTTCTGAGATGGGAA | + |
Preference number: 3 (lower is better) Translates to: YRLLGSQVGSVQPGLCSVMESSP*MLLRWE Trigger: TTCCCATCTCAGAAGCATCAACGGAGAACTTTCCAT...TACACTGCATAAACCAGGTTGGACTGAGCCTACCTGTGATCCTAGCAGTCGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACACCAAGGGGAGAGCCTaGAGGGCTTGTGGCCCTGGA | + |
Preference number: 3 (lower is better) Translates to: QPQDDKELFKSLNQLHKYTKGRA*RACGPG Trigger: TCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR GCA 72 bp | GGAAATGCCTGCATCATCTGTTTAGATTTCCAGGCCTaGCTGGGTTATATGAGGGCCCAGTTCAGAAAAACA | + |
Preference number: 3 (lower is better) Translates to: GNACIICLDFQA*LGYMRAQFRKT Trigger: TGTTTTTCTGAACTGGGCCCTCATATAACCCAGGCAGGCCTGGAAATCTAAACAGATGATGCAGGCATTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 72 bp | GCAGAGGAGTCAAATACTGTTCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCACAAGACATGTATCTTC | + |
Preference number: 3 (lower is better) Translates to: AEESNTVLDLGV*HRDFRHKTCIF Trigger: GAAGATACATGTCTTGTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAGAACAGTATTTGACTCCTCTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 72 bp | GTCAAATACTGTTCTGGATTTGGGGGTTTGACACCGTaGTTTTCGCCACAAGACATGTATCTTCCAGACCTT | + |
Preference number: 3 (lower is better) Translates to: VKYCSGFGGLTP*FSPQDMYLPDL Trigger: AAGGTCTGGAAGATACATGTCTTGTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAGAACAGTATTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR TCA 72 bp | TCCCTCAGGGAACTATTGTGTGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTT | + |
Preference number: 3 (lower is better) Translates to: SLRELLCAISML*SRDSSFLFWMF Trigger: AAACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CAA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACACCAGGTTTCCATGCCTaGGAAAATACCTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTPGFHA*ENTSGL Trigger: TAAACCAGAGGTATTTTCCAAGGCATGGAAACCTGG...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CAA 90 bp | GTGTGCCATCTCCATGCTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTCTATGCACAAGAGCATaGGAATGCTGGAACAATTAC | + |
Preference number: 3 (lower is better) Translates to: VCHLHALKQRLQFLVLDVLCTRA*ECWNNY Trigger: GTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAG...AACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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3UTR-3UTR CAA 90 bp | GAAGACAACTGTGTTAGATTCCATTCTCAGAGAGTGTCTCAAATACTCCAGGCTAGGCAATCAATCATTTaGCACAGTGCTGCTGCTGAT | + |
Preference number: 3 (lower is better) Translates to: EDNCVRFHSQRVSQILQARQSII*HSAAAD Trigger: ATCAGCAGCAGCACTGTGCAAAATGATTGATTGCCT...AGCCTGGAGTATTTGAGACACTCTCTGAGAATGGAATCTAACACAGTTGTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | AGTCCAGGATGCTTTGGCAAAAGAAGCTCTGTATCTCACATTGGTCCAATTTGCAAATATAAATGTTGCTaGAAGAAGGCCAGAGAGGGG | + |
Preference number: 3 (lower is better) Translates to: SPGCFGKRSSVSHIGPICKYKCC*KKAREG Trigger: CCCCTCTCTGGCCTTCTTCAAGCAACATTTATATTT...GCAAATTGGACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | ATCTGCAGGAGCTCTTTAGTCCTGCTTGCTGCTCTAACTCTCTACATACTAGCAAATAGGAGCAATCTGTaGGATTGTGAGCATGCAAAA | + |
Preference number: 3 (lower is better) Translates to: ICRSSLVLLAALTLYILANRSNL*DCEHAK Trigger: TTTTGCATGCTCACAATCCAACAGATTGCTCCTATT...TGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CCA 72 bp | GAAGTCCTGGTCTTCCTGTCTCACCTTGTATGTAGCTaGGGATTAGACTTATGTGACTACATATATAGGGTA | + |
Preference number: 3 (lower is better) Translates to: EVLVFLSHLVCS*GLDLCDYIYRV Trigger: TACCCTATATATGTAGTCACATAAGTCTAATCCCCAGCTACATACAAGGTGAGACAGGAAGACCAGGACTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CCA 72 bp | AGAGCCCACATGGTGCTCTCTATAACTCTAGTTCCATaGGATCTAACACCTTCACACAGACAAAACACAAAT | + |
Preference number: 3 (lower is better) Translates to: RAHMVLSITLVP*DLTPSHRQNTN Trigger: ATTTGTGTTTTGTCTGTGTGAAGGTGTTAGATCCCATGGAACTAGAGTTATAGAGAGCACCATGTGGGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACCAGGTTTCCATGCCTaGGAAAATACCTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: QASTDYSANQIARSKTDRPGFHA*ENTSGL Trigger: TAAACCAGAGGTATTTTCCAAGGCATGGAAACCTGG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR-3UTR CAA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCCAGGTTTCCATGCCTaGGAAAATACCTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: NYTFSNGTKQSKEITCQPPGFHA*ENTSGL Trigger: TAAACCAGAGGTATTTTCCAAGGCATGGAAACCTGG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR-3UTR CAA 90 bp | ATGAGTGCTATGCTGAGAGGTGACAAGCAGGGTAACATTTGTTTCCTTGATTATCCCAAACTCTATTGCTaGGCACTCAGTCTAGTATCA | + |
Preference number: 3 (lower is better) Translates to: MSAMLRGDKQGNICFLDYPKLYC*ALSLVS Trigger: TGATACTAGACTGAGTGCCAAGCAATAGAGTTTGGG...ATAATCAAGGAAACAAATGTTACCCTGCTTGTCACCTCTCAGCATAGCACTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 72 bp | CTCTGGGCCAATGGGAGATTCTATTTTAGACGTGCATaGTACCTAAGGTTTTTCTCTGAACATCACACACAT | + |
Preference number: 3 (lower is better) Translates to: LWANGRFYFRRA*YLRFFSEHHTH Trigger: ATGTGTGTGATGTTCAGAGAAAAACCTTAGGTATCATGCACGTCTAAAATAGAATCTCCCATTGGCCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR GCA 72 bp | TATTTATATTGCTCTTTCCCAGCAAGGAGTCCAGGATaGTTTGGCAAAAGAAGCTCTGTATCTCACATTGGT | + |
Preference number: 3 (lower is better) Translates to: YLYCSFPARSPG*FGKRSSVSHIG Trigger: ACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACTCCTTGCTGGGAAAGAGCAATATAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CCA 72 bp | TCAATCATTTTGCACAGTGCTGCTGCTGATGTTTTCTaGCCTCTGCACATTGTGTACCTATCAACAATAATG | + |
Preference number: 3 (lower is better) Translates to: SIILHSAAADVF*PLHIVYLSTIM Trigger: CATTATTGTTGATAGGTACACAATGTGCAGAGGCCAGAAAACATCAGCAGCAGCACTGTGCAAAATGATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR CCA 72 bp | TTTCTTAAGAACCACAATGGTCGAGTTATAGCCCAGTaGGAAAACACTTACCTTGCATTTGTAAGGCTCAAG | + |
Preference number: 3 (lower is better) Translates to: FLKNHNGRVIAQ*ENTYLAFVRLK Trigger: CTTGAGCCTTACAAATGCAAGGTAAGTGTTTTCCCACTGGGCTATAACTCGACCATTGTGGTTCTTAAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR-3UTR CAA 90 bp | AGTTTAACATTTGGTAAAGCAACCTCTCTGACACAGAGCATTTTAGTAACCTCAGCAATGGCAAACATCTaGACAACCTGCTACCCTTGT | + |
Preference number: 3 (lower is better) Translates to: SLTFGKATSLTQSILVTSAMANI*TTCYPC Trigger: ACAAGGGTAGCAGGTTGTCAAGATGTTTGCCATTGC...TGAGGTTACTAAAATGCTCTGTGTCAGAGAGGTTGCTTTACCAAATGTTAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR TCA 72 bp | AATGAAATAGCCAATTACCCAGCTAGCGCTGAGAAATaGCCACAATACCTACCTAATTCCAAGACACATTTG | + |
Preference number: 3 (lower is better) Translates to: NEIANYPASAEK*PQYLPNSKTHL Trigger: CAAATGTGTCTTGGAATTAGGTAGGTATTGTGGTCATTTCTCAGCGCTAGCTGGGTAATTGGCTATTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR GCA 72 bp | CCCAAACTCTATTGCTTGGCACTCAGTCTAGTATCATaGCTAGAAAGAGAGAGGTACTGTATTACAAAACAA | + |
Preference number: 3 (lower is better) Translates to: PKLYCLALSLVS*LERERYCITKQ Trigger: TTGTTTTGTAATACAGTACCTCTCTCTTTCTAGGCATGATACTAGACTGAGTGCCAAGCAATAGAGTTTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR TCA 72 bp | TTGACAACCTGCTACCCTTGTCTGTATAAGTATCTGTaGGACTTCTTTTTGACATTAGGCAGTTCATGTTCT | + |
Preference number: 3 (lower is better) Translates to: LTTCYPCLYKYL*DFFLTLGSSCS Trigger: AGAACATGAACTGCCTAATGTCAAAAAGAAGTCTCACAGATACTTATACAGACAAGGGTAGCAGGTTGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR-3UTR CAA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCTATGCACAAGAGCATaGGAATGCTGGAACAATTAC | + |
Preference number: 3 (lower is better) Translates to: YQPQDDKELFKSLNQLHKLCTRA*ECWNNY Trigger: GTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
3UTR CAA 72 bp | GGCAGGGCTGAACGGCACCACGTCGGTCTGCACGGCTaGCTCCATCACCGCAATGCCCTCTTCGTGGCTCAC | + |
Preference number: 4 (lower is better) Translates to: GRAERHHVGLHG*LHHRNALFVAH Trigger: GTGAGCCACGAAGAGGGCATTGCGGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCCGTTCAGCCCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
||
CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGGTTTGCGCTGGGGCTaGAGGAACCAGCCCCGGCCC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWGLRWG*RNQPRP Trigger: GGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
||
CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGCTGAGATGGCAGGGCTaGACGGCACCACGTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQLRWQG*TAPRRS Trigger: AGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAG...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGCGTGGCAAGCGGTTTaGGCTGGGGCTGGAGGAACC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWAWQAV*AGAGGT Trigger: GGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
||
CDS-3UTR GCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCCTCAGGAGCCGAGATaGTGCCTGTGCTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTPQEPR*CLCCSR Trigger: CCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGG...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGTCCCCTCGGCCTCTTaGCTTCTGGAGCCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGVPSAS*LLEPAR Trigger: CCGTGCTGGCTCCAGAAGTCAAGAGGCCGAGGGGAC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
||
CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGPRGEP*GLVALE Trigger: CTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR GCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTGMMLH*SAHEGL Trigger: GAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCC...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQGMMLH*SAHEGL Trigger: GAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDGMMLH*SAHEGL Trigger: GAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCC...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCGGCACCACGTCGGTCTaGACGGCTTGCTCCATCACC | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCGTTSV*TACSIT Trigger: GGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCC...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GAGAAGCTTTCCATCGAGTCAGCTCCAGATTCATCTGGAGATGCTGAGCTTGTGGTCCCCTCGGCCTCTTaGCTTCTGGAGCCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: EKLSIESAPDSSGDAELVVPSAS*LLEPAR Trigger: CCGTGCTGGCTCCAGAAGTCAAGAGGCCGAGGGGAC...CACAAGCTCAGCATCTCCAGATGAATCTGGAGCTGACTCGATGGAAAGCTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR TCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGCTAATCGTCCTTGCTaGGCGTCCAGAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWANRPC*ASRAAG Trigger: CCCAGCAGCTCTGGACGCTCAGCAAGGACGATTAGC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWARLVG*CSIAPP Trigger: GGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACTGAGATGGCAGGGCTaGACGGCACCACGTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGLRWQG*TAPRRS Trigger: AGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGCTCTCTGCTCCTTCTTaGTCTCTCGGAGGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWLSAPS*SLGGAP Trigger: TGGGGCCCCTCCGAGAGAGCAAGAAGGAGCAGAGAG...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACAGGAGCCGAGATGCTaGCTGTGCTGCTCGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGQEPRC*LCCSRS Trigger: GCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGGGATGGTGGGCTGCTaGCAGACTTGTGGGATGATG | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQGMVGC*QTCGMM Trigger: CATCATCCCACAAGTCTGGCAGCAGCCCACCATCCC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACTTGGGGATGGTGGGCTaGTGCCAGACTTGTGGGATG | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDLGMVG*CQTCGM Trigger: CATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTTTGGGGATGGTGGGCTaGTGCCAGACTTGTGGGATG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTLGMVG*CQTCGM Trigger: CATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ATCTGCAGGAGCTCTTTAGTCCTGCTTGCTGCTCTAACTCTCTACATACTAGCAGGTTTGCGCTGGGGCTaGAGGAACCAGCCCCGGCCC | + |
Preference number: 4 (lower is better) Translates to: ICRSSLVLLAALTLYILAGLRWG*RNQPRP Trigger: GGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACC...TGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAGCTAATCGTCCTTGCTaGGCGTCCAGAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTANRPC*ASRAAG Trigger: CCCAGCAGCTCTGGACGCTCAGCAAGGACGATTAGC...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQTVPCV*RSLHRR Trigger: TCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGT...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCT | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQTALGQ*EDTVQS Trigger: AGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGT...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCT | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDTALGQ*EDTVQS Trigger: AGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGT...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTGACAGTGTCCCCAAATaGCCTAGAGGCTTGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTDSVPK*PRGLCW Trigger: CCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTC...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR GCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTTGGGGATGGTGGGCTaGTGCCAGACTTGTGGGATG | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLGMVG*CQTCGM Trigger: CATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDSLVLR*LTVTSF Trigger: GAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCT...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGACTGCCTCACAACACTaGCCTGGGACAGTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQTASQH*PGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGT...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACTTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDLLLQY*LTTLPW Trigger: CCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAA...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCAGGGCAAAAGCCAATaGGACTGTGCCCTGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTQGKSQ*DCALCL Trigger: CAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTG...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGTTCCCTTGGGGATGGTaGGCTGCTGCCAGACTTGTG | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWFPWGW*AAARLV Trigger: CACAAGTCTGGCAGCAGCCCACCATCCCCAAGGGAA...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCAGACTCCTTCAGCTTaGTCCTCAGGTGCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTQTPSA*SSGASL Trigger: CAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTG...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGTCAGATTCCCTCTCATaGAGTCGGCGCTCAGACTCC | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQSDSLS*SRRSDS Trigger: GGAGTCTGAGCGCCGACTCCATGAGAGGGAATCTGA...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTTCAGATTCCCTCTCATaGAGTCGGCGCTCAGACTCC | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTSDSLS*SRRSDS Trigger: GGAGTCTGAGCGCCGACTCCATGAGAGGGAATCTGA...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ATCTGCAGGAGCTCTTTAGTCCTGCTTGCTGCTCTAACTCTCTACATACTAGCAGTCCCCTCGGCCTCTTaGCTTCTGGAGCCAGCACGG | + |
Preference number: 4 (lower is better) Translates to: ICRSSLVLLAALTLYILAVPSAS*LLEPAR Trigger: CCGTGCTGGCTCCAGAAGTCAAGAGGCCGAGGGGAC...TGCTAGTATGTAGAGAGTTAGAGCAGCAAGCAGGACTAAAGAGCTCCTGCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS-3UTR TCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCAC | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTLDLGV*HRDFRH Trigger: GTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAG...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCAGGTGCCTCACTGTaGCCTCCTTCTGCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTSGASL*PPSAAE Trigger: CTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGA...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGTCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGTCTGTACCCCCTCTCTaGGTACTGAATGCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQSVPPL*VLNAHR Trigger: TCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGA...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGGGATGGTGGGCTGCTaGCAGACTTGTGGGATGATG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGGMVGC*QTCGMM Trigger: CATCATCCCACAAGTCTGGCAGCAGCCCACCATCCC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGATTGGGGATGGTGGGCTaGTGCCAGACTTGTGGGATG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGLGMVG*CQTCGM Trigger: CATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWSLVLR*LTVTSF Trigger: GAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCT...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTGGCACCACGTCGGTCTaGACGGCTTGCTCCATCACC | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPGTTSV*TACSIT Trigger: GGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCC...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLLLQY*LTTLPW Trigger: CCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATTCCCTTGGGGATGGTaGGCTGCTGCCAGACTTGTG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTFPWGW*AAARLV Trigger: CACAAGTCTGGCAGCAGCCCACCATCCCCAAGGGAA...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGCAGACTCCTTCAGCTTaGTCCTCAGGTGCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWQTPSA*SSGASL Trigger: CAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTG...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCT | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWGHWIL*WWQSPS Trigger: AGATGGTGACTGCCACCACCACAGAATCCAGTGGCC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDEMLSL*DSSPAA Trigger: AGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTC...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGCTCACAACACTGCCCTaGGACAGTGAGAGGACACTG | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWLTTLP*DSERTL Trigger: CAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAG...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTCACAACACTGCCCTaGGACAGTGAGAGGACACTG | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLTTLP*DSERTL Trigger: CAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAG...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACCAGAGCTGCTGGGGTTaGACTCTCTACTTTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDQSCWG*TLYFLP Trigger: AGGAAGAAAGTAGAGAGTTCAACCCCAGCAGCTCTG...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGCTAATCGTCCTTGCTaGGCGTCCAGAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASANRPC*ASRAAG Trigger: CCCAGCAGCTCTGGACGCTCAGCAAGGACGATTAGC...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTGCTAATCGTCCTTGCTaGGCGTCCAGAGCTGCTGGG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPANRPC*ASRAAG Trigger: CCCAGCAGCTCTGGACGCTCAGCAAGGACGATTAGC...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGA | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTTVPCV*RSLHRR Trigger: TCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCAC | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLDLGV*HRDFRH Trigger: GTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAG...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTAISML*SRDSSF Trigger: GAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGC...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCCCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFPRGEP*GLVALE Trigger: CTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGG...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTCTGTACCCCCTCTCTaGGTACTGAATGCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCSVPPL*VLNAHR Trigger: TCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGCGATACCGACTGGCTaGTGGGACAACCTGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGAIPTG*WDNLCH Trigger: ATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACTGTAGGAGCCGGAGTTaGTGCTACTTGGAGAAGAAG | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDCRSRS*CYLEKK Trigger: CTTCTTCTCCAAGTAGCAGCAACTCCGGCTCCTACA...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TGTCTCCCACCAGAAGCTCACTGTCAGCACCTTCCTCTGTTATCTGTTCTTCCAACAGGCGATACCGACTaGCTGCTGGGACAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: CLPPEAHCQHLPLLSVLPTGDTD*LLGQPV Trigger: CACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGT...TGGAAGAACAGATAACAGAGGAAGGTGCTGACAGTGAGCTTCTGGTGGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCAGGGCAAAAGCCAATaGGACTGTGCCCTGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHQGKSQ*DCALCL Trigger: CAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTG...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACACAGGGCAAAAGCCAATaGGACTGTGCCCTGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTQGKSQ*DCALCL Trigger: CAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTG...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTGCTGCCAGACTTGTaGGATGATGCTCCATTGCTC | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLLPDL*DDAPLL Trigger: GAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAG...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAAAGGTCTTTTTCCCTTaGGGATGGTGGGCTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGKVFFP*GWWAAA Trigger: GGCAGCAGCCCACCATCCCCAAGGGAAAAAGACCTT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGTTACTGGGGCTCAGTaGATTCCTGCACAGCATAGA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQVTGAQ*IPAQHR Trigger: TCTATGCTGTGCAGGAATCCACTGAGCCCCAGTAAC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACACAGACTCCTTCAGCTTaGTCCTCAGGTGCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTQTPSA*SSGASL Trigger: CAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTG...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCAGACTCCTTCAGCTTaGTCCTCAGGTGCCTCACTG | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHQTPSA*SSGASL Trigger: CAGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTG...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGCACTGGATTCTGTGGTaGTGGCAGTCACCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQHWILW*WQSPSH Trigger: ATGAGATGGTGACTGCCACCACCACAGAATCCAGTG...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGGHWIL*WWQSPS Trigger: AGATGGTGACTGCCACCACCACAGAATCCAGTGGCC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCT | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHGHWIL*WWQSPS Trigger: AGATGGTGACTGCCACCACCACAGAATCCAGTGGCC...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACACAAACTCCAGGCCACTaGATTCTGTGGTGGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTQTPGH*ILWWWQ Trigger: CTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTG...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCAAACTCCAGGCCACTaGATTCTGTGGTGGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHQTPGH*ILWWWQ Trigger: CTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTG...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACAAACTCCAGGCCACTaGATTCTGTGGTGGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGQTPGH*ILWWWQ Trigger: CTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAAGCCTTGAGGGCTTGTaGCCCTGGAGTGGAATGAAC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGSLEGL*PWSGMN Trigger: GTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWEMLSL*DSSPAA Trigger: AGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCAC | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHLDLGV*HRDFRH Trigger: GTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAG...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCATCAGGTGCCTCACTGTaGCCTCCTTCTGCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASSGASL*PPSAAE Trigger: CTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGA...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTCAGGTGCCTCACTGTaGCCTCCTTCTGCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPSGASL*PPSAAE Trigger: CTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTTTCTGGCTTCTTTaGGTGCCAACTGAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCLFWLL*VPTEPP Trigger: TGGAGGCTCAGTTGGCACTCAAAGAAGCCAGAAAAG...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCCTGAGATGGCAGGGCTaGACGGCACCACGTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFLRWQG*TAPRRS Trigger: AGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAG...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQSFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTSFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGGCAGAGATAGATTCTaGGAAGCTTTCCATCGAGTC | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQGRDRF*EAFHRV Trigger: GACTCGATGGAAAGCTTCTCAGAATCTATCTCTGCC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAATCTAGCTCTCTCATaGGGCGATTTGCATGGGCTT | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDNLALS*GDLHGL Trigger: AAGCCCATGCAAATCGCCTCATGAGAGAGCTAGATT...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTGGGATGGTGGGCTGCTaGCAGACTTGTGGGATGATG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPGMVGC*QTCGMM Trigger: CATCATCCCACAAGTCTGGCAGCAGCCCACCATCCC...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTGTAGGAGCCGGAGTTaGTGCTACTTGGAGAAGAAG | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCCRSRS*CYLEKK Trigger: CTTCTTCTCCAAGTAGCAGCAACTCCGGCTCCTACA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGTGTGTGCCATCTCCATaGTTTGAAGCAGAGACTCCA | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQCVPSP*FEAETP Trigger: TGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACA...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACCCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAA | + |
Preference number: 4 (lower is better) Translates to: LRQHGRGISMLSTPLWWDPPRNC*SSTASQ Trigger: TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGG...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGGTTTGCGCTGGGGCTaGAGGAACCAGCCCCGGCCC | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTGLRWG*RNQPRP Trigger: GGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACC...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTATCTGCTTCACTGCCTaGCTTTATGATGCCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTICFTA*LYDASL Trigger: AAGGGAGGCATCATAAAGCCAGGCAGTGAAGCAGAT...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACACTGCTGCCAGACTTGTaGGATGATGCTCCATTGCTC | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTLLPDL*DDAPLL Trigger: GAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAG...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTTCCCTTGGGGATGGTaGGCTGCTGCCAGACTTGTG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPFPWGW*AAARLV Trigger: CACAAGTCTGGCAGCAGCCCACCATCCCCAAGGGAA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGEMLSL*DSSPAA Trigger: AGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAACAACCTGTGTCATCTaGGCAGAAGCTGTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGTTCVI*AEAVAA Trigger: AGCAGCAACAGCTTCTGCTCAGATGACACAGGTTGT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATACAACCTGTGTCATCTaGGCAGAAGCTGTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHTTCVI*AEAVAA Trigger: AGCAGCAACAGCTTCTGCTCAGATGACACAGGTTGT...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGA | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASTVPCV*RSLHRR Trigger: TCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGT...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFARLVG*CSIAPP Trigger: GGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGC...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACTTTTCTGGCTTCTTTaGGTGCCAACTGAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGLFWLL*VPTEPP Trigger: TGGAGGCTCAGTTGGCACTCAAAGAAGCCAGAAAAG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACACTTTTCTGGCTTCTTTaGGTGCCAACTGAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTLFWLL*VPTEPP Trigger: TGGAGGCTCAGTTGGCACTCAAAGAAGCCAGAAAAG...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHAISML*SRDSSF Trigger: GAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGC...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ATGAGTGCTATGCTGAGAGGTGACAAGCAGGGTAACATTTGTTTCCTTGATTATGCGTGGCAAGCGGTTTaGGCTGGGGCTGGAGGAACC | + |
Preference number: 4 (lower is better) Translates to: MSAMLRGDKQGNICFLDYAWQAV*AGAGGT Trigger: GGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGC...ATAATCAAGGAAACAAATGTTACCCTGCTTGTCACCTCTCAGCATAGCACTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCCCCATTTCGCTGCTaGCTGCCGGCTCCCCACGCC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIAPFRC*LPAPHA Trigger: GGCGTGGGGAGCCGGCAGGCAGCAGCGAAATGGGGC...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS-3UTR GCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAACAGGAGCCGAGATGCTaGCTGTGCTGCTCGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALEQEPRC*LCCSRS Trigger: GCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTG...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAACCTCAGGAGCCGAGATaGTGCCTGTGCTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALEPQEPR*CLCCSR Trigger: CCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGG...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR GCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCGGGATGATGCTCCATTaGTCCGCCCATGAGGGCCTC | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFGMMLH*SAHEGL Trigger: GAGGCCCTCATGGGCGGAGCAATGGAGCATCATCCC...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACTGTGACCTCCTTCTaGTGCAGAGGAGTCAAATAC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWTVTSF*CRGVKY Trigger: GTATTTGACTCCTCTGCAGCAGAAGGAGGTCACAGT...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGCAGGGAACTATTGTGTaGCATCTCCATGCTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQQGTIV*HLHALK Trigger: CTTCAAAGCATGGAGATGGCACACAATAGTTCCCTG...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGCATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPLLLQY*LTTLPW Trigger: CCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCA | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCDPPRN*CSSTAS Trigger: TGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATC...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCA | + |
Preference number: 4 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWDPPRN*CSSTAS Trigger: TGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCATCTGCTTCACTGCCTaGCTTTATGATGCCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCICFTA*LYDASL Trigger: AAGGGAGGCATCATAAAGCCAGGCAGTGAAGCAGAT...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAGTTACTGGGGCTCAGTaGATTCCTGCACAGCATAGA | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTVTGAQ*IPAQHR Trigger: TCTATGCTGTGCAGGAATCCACTGAGCCCCAGTAAC...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACACTGGATTCTGTGGTaGTGGCAGTCACCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGHWILW*WQSPSH Trigger: ATGAGATGGTGACTGCCACCACCACAGAATCCAGTG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 72 bp | TCGAGTCAGCTCCAGATTCATCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCAGCTTTAGCACACTCT | + |
Preference number: 4 (lower is better) Translates to: SSQLQIHLEMLS*WDSSPAALAHS Trigger: AGAGTGTGCTAAAGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAGATGAATCTGGAGCTGACTCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTARLVG*CSIAPP Trigger: GGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCAC | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPLDLGV*HRDFRH Trigger: GTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAG...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACTGAGATGGCAGGGCTaGACGGCACCACGTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRLRWQG*TAPRRS Trigger: AGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATGGCAGAGATAGATTCTaGGAAGCTTTCCATCGAGTC | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHGRDRF*EAFHRV Trigger: GACTCGATGGAAAGCTTCTCAGAATCTATCTCTGCC...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAAATCTAGCTCTCTCATaGGGCGATTTGCATGGGCTT | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTNLALS*GDLHGL Trigger: AAGCCCATGCAAATCGCCTCATGAGAGAGCTAGATT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAACTGTGACCTCCTTCTaGTGCAGAGGAGTCAAATAC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGTVTSF*CRGVKY Trigger: GTATTTGACTCCTCTGCAGCAGAAGGAGGTCACAGT...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAACTGTGACCTCCTTCTaGTGCAGAGGAGTCAAATAC | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTTVTSF*CRGVKY Trigger: GTATTTGACTCCTCTGCAGCAGAAGGAGGTCACAGT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATTCTCTGAGTACTGAATaGCCACAGAACAGTGGGTAC | + |
Preference number: 4 (lower is better) Translates to: LPLITCCCSTWHQATQIHSLSTE*PQNSGY Trigger: GTACCCACTGTTCTGTGGGCATTCAGTACTCAGAGA...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGATCTCTGAGTACTGAATaGCCACAGAACAGTGGGTAC | + |
Preference number: 4 (lower is better) Translates to: FLHHSGGTATRTRFPCLGSLSTE*PQNSGY Trigger: GTACCCACTGTTCTGTGGGCATTCAGTACTCAGAGA...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCACAGGCGATACCGACTaGCTGCTGGGACAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFTGDTD*LLGQPV Trigger: CACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGT...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGCCAGACTTGTGGGATaGTGCTCCATTGCTCCGCCC | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPARLVG*CSIAPP Trigger: GGGCGGAGCAATGGAGCATCATCCCACAAGTCTGGC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPAISML*SRDSSF Trigger: GAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGC...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIPRGEP*GLVALE Trigger: CTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCT | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFTALGQ*EDTVQS Trigger: AGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGT...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCTCTCTGCTCCTTCTTaGTCTCTCGGAGGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPLSAPS*SLGGAP Trigger: TGGGGCCCCTCCGAGAGAGCAAGAAGGAGCAGAGAG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACTCTCTGCTCCTTCTTaGTCTCTCGGAGGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRLSAPS*SLGGAP Trigger: TGGGGCCCCTCCGAGAGAGCAAGAAGGAGCAGAGAG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | GTGTGCCATCTCCATGCTTTGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTTGCGATACCGACTGGCTaGTGGGACAACCTGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: VCHLHALKQRLQFLVLDVAIPTG*WDNLCH Trigger: ATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGC...AACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR GCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTCCTCAGGAGCCGAGATaGTGCCTGTGCTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTPQEPR*CLCCSR Trigger: CCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGG...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGGGATGGTGGGCTGCTaGCAGACTTGTGGGATGATG | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTGMVGC*QTCGMM Trigger: CATCATCCCACAAGTCTGGCAGCAGCCCACCATCCC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACATTGGGGATGGTGGGCTaGTGCCAGACTTGTGGGATG | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTLGMVG*CQTCGM Trigger: CATCCCACAAGTCTGGCAGCAGCCCACCATCCCCAA...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTGTAGGAGCCGGAGTTaGTGCTACTTGGAGAAGAAG | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPCRSRS*CYLEKK Trigger: CTTCTTCTCCAAGTAGCAGCAACTCCGGCTCCTACA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCATGTAGGAGCCGGAGTTaGTGCTACTTGGAGAAGAAG | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASCRSRS*CYLEKK Trigger: CTTCTTCTCCAAGTAGCAGCAACTCCGGCTCCTACA...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAACAGGCGATACCGACTaGCTGCTGGGACAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTTGDTD*LLGQPV Trigger: CACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCAGTCAAATACTGTTCTaGATTTGGGGGTTTGACACC | + |
Preference number: 4 (lower is better) Translates to: ACFLHHSGGTATRTRFPCSQILF*IWGFDT Trigger: GGTGTCAAACCCCCAAATCCAGAACAGTATTTGACT...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCCAAACTCCAGGCCACTaGATTCTGTGGTGGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFQTPGH*ILWWWQ Trigger: CTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTG...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGCAATGCCCTCTTCGTaGCTCACCAAGGGGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPAMPSS*LTKGRA Trigger: GGCTCTCCCCTTGGTGAGCCACGAAGAGGGCATTGC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGATCAGGTGCCTCACTGTaGCCTCCTTCTGCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRSGASL*PPSAAE Trigger: CTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGA...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCCAAGGGGAGAGCCTTaGGGGCTTGTGGCCCTGGAG | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKPRGEP*GLVALE Trigger: CTCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCTGAGATGGCAGGGCTaGACGGCACCACGTCGGTCT | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYLRWQG*TAPRRS Trigger: AGACCGACGTGGTGCCGTTCAGCCCTGCCATCTCAG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGCGTGGCAAGCGGTTTaGGCTGGGGCTGGAGGAACC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKAWQAV*AGAGGT Trigger: GGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR GCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAAGCGATACCGACTGGCTaGTGGGACAACCTGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALEAIPTG*WDNLCH Trigger: ATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGC...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACAGGAGCCGAGATGCTaGCTGTGCTGCTCGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIQEPRC*LCCSRS Trigger: GCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCAGGAGCCGAGATGCTaGCTGTGCTGCTCGAGGAGC | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYQEPRC*LCCSRS Trigger: GCTCCTCGAGCAGCACAGGCAGCATCTCGGCTCCTG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACCTCAGGAGCCGAGATaGTGCCTGTGCTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIPQEPR*CLCCSR Trigger: CCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTSLVLR*LTVTSF Trigger: GAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTGTGTGCCATCTCCATaGTTTGAAGCAGAGACTCCA | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPCVPSP*FEAETP Trigger: TGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCACATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACGGCACCACGTCGGTCTaGACGGCTTGCTCCATCACC | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYGTTSV*TACSIT Trigger: GGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCC...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAAACTGCCTCACAACACTaGCCTGGGACAGTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALETASQH*PGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGT...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAACTGCCTCACAACACTaGCCTGGGACAGTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTTASQH*PGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATG | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPPVVDM*TSGAEM Trigger: CATCTCGGCTCCTGAGGTCCACATGTCCACGACAGG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATG | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRPVVDM*TSGAEM Trigger: CATCTCGGCTCCTGAGGTCCACATGTCCACGACAGG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTTCCCTTGGGGATGGTaGGCTGCTGCCAGACTTGTG | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPFPWGW*AAARLV Trigger: CACAAGTCTGGCAGCAGCCCACCATCCCCAAGGGAA...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAAGTCAAATACTGTTCTaGATTTGGGGGTTTGACACC | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTSQILF*IWGFDT Trigger: GGTGTCAAACCCCCAAATCCAGAACAGTATTTGACT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAATCAGATTCCCTCTCATaGAGTCGGCGCTCAGACTCC | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALESDSLS*SRRSDS Trigger: GGAGTCTGAGCGCCGACTCCATGAGAGGGAATCTGA...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGTCAGGTGCCTCACTGTaGCCTCCTTCTGCTGCAGAG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIASGASL*PPSAAE Trigger: CTCTGCAGCAGAAGGAGGTCACAGTGAGGCACCTGA...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTCGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 4 (lower is better) Translates to: HASLRKAVVKVQTAFSLPRGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCCTCAGGAGCCGAGATaGTGCCTGTGCTGCTCGAGG | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKPQEPR*CLCCSR Trigger: CCTCGAGCAGCACAGGCAGCATCTCGGCTCCTGAGG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAACTTGTCAAATGTGCTaGTCAGGGGTAAACTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTTCQMC*SGVNFS Trigger: AGAAAAGTTTACCCCTGAGCAGCACATTTGACAAGT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGGCACCACGTCGGTCTaGACGGCTTGCTCCATCACC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKGTTSV*TACSIT Trigger: GGTGATGGAGCAAGCCGTGCAGACCGACGTGGTGCC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGATTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRLLLQY*LTTLPW Trigger: CCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAA...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTTGCTGCTCCAGTACTaGCTCACAACACTGCCCTGG | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPLLLQY*LTTLPW Trigger: CCAGGGCAGTGTTGTGAGGCAGTACTGGAGCAGCAA...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGCACTCTCTGCTCCTTaGTCTCTCGGAGGGGCCCCA | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKALSAP*SLGGAP Trigger: TGGGGCCCCTCCGAGAGAGCAAGGAGCAGAGAGTGC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227305.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTAAGGTCTTTTTCCCTTaGGGATGGTGGGCTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPKVFFP*GWWAAA Trigger: GGCAGCAGCCCACCATCCCCAAGGGAAAAAGACCTT...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTTCCAGTTTCTTGTTTTaGATGTTTATGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTSSFLF*MFMSTK Trigger: CTTTGTGGACATAAACATCCAAAACAAGAAACTGGA...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCCACTGGATTCTGTGGTaGTGGCAGTCACCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFHWILW*WQSPSH Trigger: ATGAGATGGTGACTGCCACCACCACAGAATCCAGTG...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCT | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPGHWIL*WWQSPS Trigger: AGATGGTGACTGCCACCACCACAGAATCCAGTGGCC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAAGCCTTGAGGGCTTGTaGCCCTGGAGTGGAATGAAC | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRSLEGL*PWSGMN Trigger: GTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCT...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGA | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIATVPCV*RSLHRR Trigger: TCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGT...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR TCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCCCCTCTCTGAGTACTaGATGCCCACAGAACAGTGG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIAPLSEY*MPTEQW Trigger: CCACTGTTCTGTGGGCATTCAGTACTCAGAGAGGGG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGTGTCCCCAAATaGCCTAGAGGCTTGTGCTGG | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTDSVPK*PRGLCW Trigger: CCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTC...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR GCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGACTGCCTCACAACACTaGCCTGGGACAGTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIATASQH*PGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGT...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACACAGGCGATACCGACTaGCTGCTGGGACAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYTGDTD*LLGQPV Trigger: CACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAACAGGCGATACCGACTaGCTGCTGGGACAACCTGTG | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQITGDTD*LLGQPV Trigger: CACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCAGGGCAAAAGCCAATaGGACTGTGCCCTGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIAQGKSQ*DCALCL Trigger: CAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATG | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYPVVDM*TSGAEM Trigger: CATCTCGGCTCCTGAGGTCCACATGTCCACGACAGG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACCTGTCGTGGACATGTaGACCTCAGGAGCCGAGATG | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQPVVDM*TSGAEM Trigger: CATCTCGGCTCCTGAGGTCCACATGTCCACGACAGG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGTTACTGGGGCTCAGTaGATTCCTGCACAGCATAGA | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTVTGAQ*IPAQHR Trigger: TCTATGCTGTGCAGGAATCCACTGAGCCCCAGTAAC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGTCAGATTCCCTCTCATaGAGTCGGCGCTCAGACTCC | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIASDSLS*SRRSDS Trigger: GGAGTCTGAGCGCCGACTCCATGAGAGGGAATCTGA...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCAAACTCCAGGCCACTaGATTCTGTGGTGGTGGCAG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIAQTPGH*ILWWWQ Trigger: CTGCCACCACCACAGAATCCAGTGGCCTGGAGTTTG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTAGCCTTGAGGGCTTGTaGCCCTGGAGTGGAATGAAC | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTSLEGL*PWSGMN Trigger: GTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCT...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAGAGATGCTGAGCTTGTaGGACAGTAGTCCTGCAGCT | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDREMLSL*DSSPAA Trigger: AGCTGCAGGACTACTGTCCCACAAGCTCAGCATCTC...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCTCACAACACTGCCCTaGGACAGTGAGAGGACACTG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIALTTLP*DSERTL Trigger: CAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTCTCACAACACTGCCCTaGGACAGTGAGAGGACACTG | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTLTTLP*DSERTL Trigger: CAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAG...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCAGAGCTGCTGGGGTTaGACTCTCTACTTTCTTCCT | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPQSCWG*TLYFLP Trigger: AGGAAGAAAGTAGAGAGTTCAACCCCAGCAGCTCTG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACTCTTTGAGTGCCAACTaGGCCTCCACTCTGTGGCAC | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYSLSAN*ASTLWH Trigger: GTGCCACAGAGTGGAGGCTCAGTTGGCACTCAAAGA...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAACTCTGAATGAGCTCTaGGATGGCAGGGCTGAACGG | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQTLNEL*DGRAER Trigger: CCGTTCAGCCCTGCCATCTCAGAGCTCATTCAGAGT...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAAAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALESFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGGCAGAGATAGATTCTaGGAAGCTTTCCATCGAGTC | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTGRDRF*EAFHRV Trigger: GACTCGATGGAAAGCTTCTCAGAATCTATCTCTGCC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAAATCTAGCTCTCTCATaGGGCGATTTGCATGGGCTT | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTNLALS*GDLHGL Trigger: AAGCCCATGCAAATCGCCTCATGAGAGAGCTAGATT...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAACTGCCCTGGGACAGTaGGAGGACACTGTCCAATCT | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQTALGQ*EDTVQS Trigger: AGATTGGACAGTGTCCTCTCACTGTCCCAGGGCAGT...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACCCCTCTCTGAGTACTaGATGCCCACAGAACAGTGG | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQPLSEY*MPTEQW Trigger: CCACTGTTCTGTGGGCATTCAGTACTCAGAGAGGGG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCCCCTCTCTGAGTACTaGATGCCCACAGAACAGTGG | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYPLSEY*MPTEQW Trigger: CCACTGTTCTGTGGGCATTCAGTACTCAGAGAGGGG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGATACCGACTGGCTaGTGGGACAACCTGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIAIPTG*WDNLCH Trigger: ATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGC...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAAGCTTGGTCCTCAGGTaGCTCACTGTGACCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQISLVLR*LTVTSF Trigger: GAAGGAGGTCACAGTGAGGCACCTGAGGACCAAGCT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAACTTGTCAAATGTGCTaGTCAGGGGTAAACTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TDRIETSTDHLLLLYLASTCQMC*SGVNFS Trigger: AGAAAAGTTTACCCCTGAGCAGCACATTTGACAAGT...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACACATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACACTGCCTCACAACACTaGCCTGGGACAGTGAGAGGA | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYTASQH*PGTVRG Trigger: TCCTCTCACTGTCCCAGGGCAGTGTTGTGAGGCAGT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCA | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTDPPRN*CSSTAS Trigger: TGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGGGGAATCCGGCTCCTaGAAATCTCTTTCTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPGESGS*KSLSPD Trigger: ATCAGGAGAAAGAGATTTCCAGGAGCCGGATTCCCC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAGGGGAATCCGGCTCCTaGAAATCTCTTTCTCCTGAT | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRGESGS*KSLSPD Trigger: ATCAGGAGAAAGAGATTTCCAGGAGCCGGATTCCCC...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCAGGGCAAAAGCCAATaGGACTGTGCCCTGTGTCTG | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYQGKSQ*DCALCL Trigger: CAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCTGCTGCCAGACTTGTaGGATGATGCTCCATTGCTC | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIALLPDL*DDAPLL Trigger: GAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGTTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIAFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTTTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAAGGTCTTTTTCCCTTaGGGATGGTGGGCTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYKVFFP*GWWAAA Trigger: GGCAGCAGCCCACCATCCCCAAGGGAAAAAGACCTT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAAAGGTCTTTTTCCCTTaGGGATGGTGGGCTGCTGCC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIKVFFP*GWWAAA Trigger: GGCAGCAGCCCACCATCCCCAAGGGAAAAAGACCTT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGTTACTGGGGCTCAGTaGATTCCTGCACAGCATAGA | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPVTGAQ*IPAQHR Trigger: TCTATGCTGTGCAGGAATCCACTGAGCCCCAGTAAC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCCAGTTTCTTGTTTTaGATGTTTATGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: TSTDHLLLLYLASGHTDTSSFLF*MFMSTK Trigger: CTTTGTGGACATAAACATCCAAAACAAGAAACTGGA...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACACTGGATTCTGTGGTaGTGGCAGTCACCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRHWILW*WQSPSH Trigger: ATGAGATGGTGACTGCCACCACCACAGAATCCAGTG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGGCCACTGGATTCTGTaGTGGTGGCAGTCACCATCT | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIGHWIL*WWQSPS Trigger: AGATGGTGACTGCCACCACCACAGAATCCAGTGGCC...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACTCACAACACTGCCCTaGGACAGTGAGAGGACACTG | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQLTTLP*DSERTL Trigger: CAGTGTCCTCTCACTGTCCCAGGGCAGTGTTGTGAG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 72 bp | TATATTGCTCTTTCCCAGCAAGGAGTCCAGGATGCTTaGGCAAAAGAAGCTCTGTATCTCACATTGGTCCAA | + |
Preference number: 4 (lower is better) Translates to: YIALSQQGVQDA*AKEALYLTLVQ Trigger: TTGGACCAATGTGAGATACAGAGCTTCTTTTGCCAAAGCATCCTGGACTCCTTGCTGGGAAAGAGCAATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
||
3UTR CAA 72 bp | ATCCCTCAGGGAACTATTGTGTGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTTCTTGTTTTGGATGTT | + |
Preference number: 4 (lower is better) Translates to: IPQGTIVCHLHA*KQRLQFLVLDV Trigger: AACATCCAAAACAAGAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACAATAGTTCCCTGAGGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCTGGATTTGGGGGTTTaGCACCGTGATTTTCGCCAC | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYLDLGV*HRDFRH Trigger: GTGGCGAAAATCACGGTGTCAAACCCCCAAATCCAG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCTTTTCTGGCTTCTTTaGGTGCCAACTGAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIALFWLL*VPTEPP Trigger: TGGAGGCTCAGTTGGCACTCAAAGAAGCCAGAAAAG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTCTTTTCTGGCTTCTTTaGGTGCCAACTGAGCCTCCA | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTLFWLL*VPTEPP Trigger: TGGAGGCTCAGTTGGCACTCAAAGAAGCCAGAAAAG...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR TCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRSFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAATCTGTACCCCCTCTCTaGGTACTGAATGCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQSVPPL*VLNAHR Trigger: TCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGA...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACTCTGTACCCCCTCTCTaGGTACTGAATGCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYSVPPL*VLNAHR Trigger: TCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGA...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGCGATACCGACTGGCTaGTGGGACAACCTGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKAIPTG*WDNLCH Trigger: ATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000226214.2 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAACGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 4 (lower is better) Translates to: HIFKRHKAKQGDNMPALERGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGTGTAGGAGCCGGAGTTaGTGCTACTTGGAGAAGAAG | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIACRSRS*CYLEKK Trigger: CTTCTTCTCCAAGTAGCAGCAACTCCGGCTCCTACA...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGATGTGTGCCATCTCCATaGTTTGAAGCAGAGACTCCA | + |
Preference number: 4 (lower is better) Translates to: QASTDYSANQIARSKTDRCVPSP*FEAETP Trigger: TGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACA...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAA | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPPPRNC*SSTASQ Trigger: TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTATCTGCTTCACTGCCTaGCTTTATGATGCCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPICFTA*LYDASL Trigger: AAGGGAGGCATCATAAAGCCAGGCAGTGAAGCAGAT...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACTGCTGCCAGACTTGTaGGATGATGCTCCATTGCTC | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQLLPDL*DDAPLL Trigger: GAGCAATGGAGCATCATCCCACAAGTCTGGCAGCAG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAATTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGTTACTGGGGCTCAGTaGATTCCTGCACAGCATAGA | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTVTGAQ*IPAQHR Trigger: TCTATGCTGTGCAGGAATCCACTGAGCCCCAGTAAC...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGAGCCTTGAGGGCTTGTaGCCCTGGAGTGGAATGAAC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKSLEGL*PWSGMN Trigger: GTTCATTCCACTCCAGGGCCACAAGCCCTCAAGGCT...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 72 bp | TGTTTGATGACACCTTACACTACTCCCCAAACTCTATaGCTTGGCACTCAGTCTAGTATCATGCCTAGAAAG | + |
Preference number: 4 (lower is better) Translates to: CLMTPYTTPQTL*LGTQSSIMPRK Trigger: CTTTCTAGGCATGATACTAGACTGAGTGCCAAGCAATAGAGTTTGGGGAGTAGTGTAAGGTGTCATCAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAACAACCTGTGTCATCTaGGCAGAAGCTGTTGCTGCT | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQTTCVI*AEAVAA Trigger: AGCAGCAACAGCTTCTGCTCAGATGACACAGGTTGT...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTCTGTACCCCCTCTCTaGGTACTGAATGCCCACAGA | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKSVPPL*VLNAHR Trigger: TCTGTGGGCATTCAGTACTCAGAGAGGGGGTACAGA...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGACTGTGACCTCCTTCTaGTGCAGAGGAGTCAAATAC | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIATVTSF*CRGVKY Trigger: GTATTTGACTCCTCTGCAGCAGAAGGAGGTCACAGT...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTTGTGTGCCATCTCCATaGTTTGAAGCAGAGACTCCA | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTCVPSP*FEAETP Trigger: TGGAGTCTCTGCTTCAAAGCATGGAGATGGCACACA...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAA | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIAPPRNC*SSTASQ Trigger: TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTTTTTCCCTTGGGGATaGTGGGCTGCTGCCAGACTT | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKFFPWG*WAAARL Trigger: AAGTCTGGCAGCAGCCCACCATCCCCAAGGGAAAAA...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACACTGGATTCTGTGGTaGTGGCAGTCACCATCTCAT | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIHWILW*WQSPSH Trigger: ATGAGATGGTGACTGCCACCACCACAGAATCCAGTG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGCCATCTCCATGCTTTaGAGCAGAGACTCCAGTTTC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKAISML*SRDSSF Trigger: GAAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAAGCTTTAGCACACTCTaGATGAGCTCTGAGATGGCA | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQISFSTL*MSSEMA Trigger: TGCCATCTCAGAGCTCATTCAGAGTGTGCTAAAGCT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGGCAGAGATAGATTCTaGGAAGCTTTCCATCGAGTC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIGRDRF*EAFHRV Trigger: GACTCGATGGAAAGCTTCTCAGAATCTATCTCTGCC...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAGGCAGAGATAGATTCTaGGAAGCTTTCCATCGAGTC | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQGRDRF*EAFHRV Trigger: GACTCGATGGAAAGCTTCTCAGAATCTATCTCTGCC...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGCGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 4 (lower is better) Translates to: SGLNSEQASTDYSANQIARGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTCGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 4 (lower is better) Translates to: SEQASTDYSANQIARSKTRGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAA | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQIPPRNC*SSTASQ Trigger: TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACCACCAAGAAATTGCTaGTCCAGTACTGCCTCACAA | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQPPRNC*SSTASQ Trigger: TTGTGAGGCAGTACTGGAGCAGCAATTTCTTGGTGG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAGATCCACCAAGAAATTaGTGCTCCAGTACTGCCTCA | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQDPPRN*CSSTAS Trigger: TGAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATC...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATATCTCTGAGTACTGAATaGCCACAGAACAGTGGGTAC | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQISLSTE*PQNSGY Trigger: GTACCCACTGTTCTGTGGGCATTCAGTACTCAGAGA...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACATCTGCTTCACTGCCTaGCTTTATGATGCCTCCCTT | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYICFTA*LYDASL Trigger: AAGGGAGGCATCATAAAGCCAGGCAGTGAAGCAGAT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTAGTCAAATACTGTTCTaGATTTGGGGGTTTGACACC | + |
Preference number: 4 (lower is better) Translates to: NYTFSNGTKQSKEITCQPSQILF*IWGFDT Trigger: GGTGTCAAACCCCCAAATCCAGAACAGTATTTGACT...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR TCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGAATCTAGCTCTCTCATaGGGCGATTTGCATGGGCTT | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKNLALS*GDLHGL Trigger: AAGCCCATGCAAATCGCCTCATGAGAGAGCTAGATT...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGGTGACCTCCTTCTGCTaGAGAGGAGTCAAATACTGT | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKVTSFC*RGVKYC Trigger: ACAGTATTTGACTCCTCTGCAGCAGAAGGAGGTCAC...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGACTGTGACCTCCTTCTaGTGCAGAGGAGTCAAATAC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKTVTSF*CRGVKY Trigger: GTATTTGACTCCTCTGCAGCAGAAGGAGGTCACAGT...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCAGGGAACTATTGTGTaGCATCTCCATGCTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: QPQDDKELFKSLNQLHKYQGTIV*HLHALK Trigger: CTTCAAAGCATGGAGATGGCACACAATAGTTCCCTG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAACAGGGAACTATTGTGTaGCATCTCCATGCTTTGAAG | + |
Preference number: 4 (lower is better) Translates to: NTSGLNSEQASTDYSANQQGTIV*HLHALK Trigger: CTTCAAAGCATGGAGATGGCACACAATAGTTCCCTG...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCATCTAACAGATCTGTaGCTTCAGCCATGCTGTCTC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKHLTDL*LQPCCL Trigger: GAGACAGCATGGCTGAAGGCACAGATCTGTTAGATG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCTCCAGTTTCTTGTTTTaGATGTTTATGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFSSFLF*MFMSTK Trigger: CTTTGTGGACATAAACATCCAAAACAAGAAACTGGA...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR GCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCGAGGAGCTAAAATCTaGTTCACTGCCTGGCTTTAT | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKRGAKI*FTAWLY Trigger: ATAAAGCCAGGCAGTGAAGCAGATTTTAGCTCCTCG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACATCCAGTTTCTTGTTTTaGATGTTTATGTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTSSFLF*MFMSTK Trigger: CTTTGTGGACATAAACATCCAAAACAAGAAACTGGA...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 72 bp | GCTCAAGGCTTTAGGTTCAATTCCCAGCATAATCTTTaGCACTCATCCACTTGGTCTCTTTTCAACTTAATA | + |
Preference number: 4 (lower is better) Translates to: AQGFRFNSQHNL*HSSTWSLFNLI Trigger: TATTAAGTTGAAAAGAGACCAAGTGGATGAGTGCAAAAGATTATGCTGGGAATTGAACCTAAAGCCTTGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS-3UTR GCA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAACTTGTCAAATGTGCTaGTCAGGGGTAAACTTTTCT | + |
Preference number: 4 (lower is better) Translates to: TSGLNSEQASTDYSANQITCQMC*SGVNFS Trigger: AGAAAAGTTTACCCCTGAGCAGCACATTTGACAAGT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CCA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGAGTCAAATACTGTTCTaGATTTGGGGGTTTGACACC | + |
Preference number: 4 (lower is better) Translates to: YQPQDDKELFKSLNQLHKSQILF*IWGFDT Trigger: GGTGTCAAACCCCCAAATCCAGAACAGTATTTGACT...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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3UTR CAA 72 bp | TGTATGTTAGAAAGTAAGGAGGCATTTTGGTTAGATTaGGAAGACAACTGTGTTAGATTCCATTCTCAGAGA | + |
Preference number: 4 (lower is better) Translates to: CMLESKEAFWLD*EDNCVRFHSQR Trigger: TCTCTGAGAATGGAATCTAACACAGTTGTCTTCCAAATCTAACCAAAATGCCTCCTTACTTTCTAACATACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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3UTR CAA 72 bp | CTAATTACATTCACCATGTACAAATATAAATGTTGCTaGAAGAAGGCCAGAGAGGGGACTTATAGAAATCCT | + |
Preference number: 4 (lower is better) Translates to: LITFTMYKYKCC*KKAREGTYRNP Trigger: AGGATTTCTATAAGTCCCCTCTCTGGCCTTCTTCAAGCAACATTTATATTTGTACATGGTGAATGTAATTAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS GCA 90 bp | CTGGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGCAAGCGGTTTaGGCTGGGGCTGGAGGAACCAGCCCCGGCCCGCTCCGCCCGCGC | + |
Preference number: 5 (lower is better) Translates to: LDWAAGRRHSAWQAV*AGAGGTSPGPLRPR Trigger: GCGCGGGCGGAGCGGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 90 bp | CCATTGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTaGTGGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGCAAGCGG | + |
Preference number: 5 (lower is better) Translates to: PLRCPDSVPKCPRGL*WTGPPAGDTARGKR Trigger: CCGCTTGCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CCA 90 bp | TTGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGCTaGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGCAAGCGGTTT | + |
Preference number: 5 (lower is better) Translates to: LRCPDSVPKCPRGLC*TGPPAGDTARGKRF Trigger: AAACCGCTTGCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 90 bp | CTTTGCAGACCGTGTCCATTGCGCTGTCCAGACAGTGTCCCCAAATaGCCTAGAGGCTTGTGCTGGACTGGGCCGCCGGCCGGCGACACA | + |
Preference number: 5 (lower is better) Translates to: LCRPCPLRCPDSVPK*PRGLCWTGPPAGDT Trigger: TGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 90 bp | CGCCGTCCAGGAGGAGGCACCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGCT | + |
Preference number: 5 (lower is better) Translates to: RRPGGGTVSFADRVH*AVQTVSPNALEACA Trigger: AGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGGTGCCTCCTCCTGGACGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS CCA 90 bp | GCTGAGGCCGATGGGGCCGCAGAATCAACCGGGGAATCCGGCTCCTaGAAATCTCTTTCTCCTGATGCTGCACTCTCTGCTCCTTCTTGC | + |
Preference number: 5 (lower is better) Translates to: AEADGAAESTGESGS*KSLSPDAALSAPSC Trigger: GCAAGAAGGAGCAGAGAGTGCAGCATCAGGAGAAAGAGATTTCCAGGAGCCGGATTCCCCGGTTGATTCTGCGGCCCCATCGGCCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000228057.2 |
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CDS CCA 90 bp | GCTGAGGCCGATGGGGCCGCAGAATCAACCGGGGAATCCGGCTCCTaGAAATCTCTTTCTCCTGATGCTGCACTCTCTGCTCCTTGCTCT | + |
Preference number: 5 (lower is better) Translates to: AEADGAAESTGESGS*KSLSPDAALSAPCS Trigger: AGAGCAAGGAGCAGAGAGTGCAGCATCAGGAGAAAGAGATTTCCAGGAGCCGGATTCCCCGGTTGATTCTGCGGCCCCATCGGCCTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000227305.2 |
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CDS-3UTR CAA 90 bp | CAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGACCAAGGGGAGAGCCTaGAGGGCTTGTGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: QTTRQGHKHAFYTTLVGQTKGRA*RACGPG Trigger: TCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGT...CTGTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACGAGAGCCTTGAGGGCTaGTGGCCCTGGAGTGGAATG | + |
Preference number: 5 (lower is better) Translates to: LRQHGRGISMLSTPLWWDESLEG*WPWSGM Trigger: CATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTC...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACCAAGGGGAGAGCCTaGAGGGCTTGTGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWTKGRA*RACGPG Trigger: TCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGT...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS TCA 90 bp | TTCATCGCTTCCAGGGCAAAAGCCAATGGGACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGATACCGACTGGCTGCTGGGACAACC | + |
Preference number: 5 (lower is better) Translates to: FIASRAKANGTVPCV*RSLHRRYRLAAGTT Trigger: GGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTGGAAGCGATGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CCA 90 bp | GGACTGTGCCCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTaGCTGCTGGGACAACCTGTGTCATCTGAGCAGAAGCTGTTGCTG | + |
Preference number: 5 (lower is better) Translates to: GLCPVSEGVFTGDTD*LLGQPVSSEQKLLL Trigger: CAGCAACAGCTTCTGCTCAGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CCA 90 bp | GGACTGTGCCCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTaGCTGCTGGGACAACCTGTGTCATCGTTTCCTTTGCAGACCGTG | + |
Preference number: 5 (lower is better) Translates to: GLCPVSEGVFTGDTD*LLGQPVSSFPLQTV Trigger: CACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110269.8 |
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CDS-3UTR CAA 90 bp | ACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACAAAATGCCCTAGAGGCTaGTGCTGGACTGGGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: TSTDHLLLLYLASGHTDTKCPRG*CWTGPP Trigger: CGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTT...TGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR CAA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCGAGAGCCTTGAGGGCTaGTGGCCCTGGAGTGGAATG | + |
Preference number: 5 (lower is better) Translates to: ACFLHHSGGTATRTRFPCESLEG*WPWSGM Trigger: CATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTC...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATACCAAGGGGAGAGCCTaGAGGGCTTGTGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: LPLITCCCSTWHQATQIHTKGRA*RACGPG Trigger: TCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGT...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS GCA 90 bp | TGTGCCCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTGGCTaGTGGGACAACCTGTGTCATCGTTTCCTTTGCAGACCGTGTCCA | + |
Preference number: 5 (lower is better) Translates to: CALCLKESSQAIPTG*WDNLCHRFLCRPCP Trigger: TGGACACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110269.8 |
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CDS GCA 90 bp | GCTGGGACAACCTGTGTCATCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGCT | + |
Preference number: 5 (lower is better) Translates to: AGTTCVIVSFADRVH*AVQTVSPNALEACA Trigger: AGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS-3UTR CAA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGGGGCTGCTGCCAGACTaGTGGGATGATGCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWGLLPD*WDDAPL Trigger: CAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTTCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 5 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: LRQHGRGISMLSTPLWWDLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS GCA 90 bp | CTGGTAAAGTCTTCATCGCTTCCAGGGCAAAAGCCAATGGGACTGTaGCCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTGGCTG | + |
Preference number: 5 (lower is better) Translates to: LVKSSSLPGQKPMGL*PVSEGVFTGDTDWL Trigger: CAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTGGAAGCGATGAAGACTTTACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS GCA 90 bp | CCAATTCTCCCCAGATCCATCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGCT | + |
Preference number: 5 (lower is better) Translates to: PILPRSIVSFADRVH*AVQTVSPNALEACA Trigger: AGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGGATCTGGGGAGAATTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS CCA 90 bp | GTTGAACTCTCTACTTTCTTCCTCCGAAAAGGGAGACTCGGAGGCTaGGGAAACCTTGTTCTGCTGCTGTTGCTGCTGCTGAGGCCGATG | + |
Preference number: 5 (lower is better) Translates to: VELSTFFLRKGRLGG*GNLVLLLLLLLRPM Trigger: CATCGGCCTCAGCAGCAGCAACAGCAGCAGAACAAGGTTTCCCCAGCCTCCGAGTCTCCCTTTTCGGAGGAAGAAAGTAGAGAGTTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGGGCTGCTGCCAGACTaGTGGGATGATGCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: FLHHSGGTATRTRFPCLGGLLPD*WDDAPL Trigger: CAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | GAACGGGCACCTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTGAGAAAGAGGCTCTCTaGTTTCCTGTCGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: ERAPQTTRQGHKHAFYTTEKEAL*FPVVDM Trigger: CATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC...AGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAGGTGCCCGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACGAGAAAGAGGCTCTCTaGTTTCCTGTCGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: LRQHGRGISMLSTPLWWDEKEAL*FPVVDM Trigger: CATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGACGGAGTTGCTGCTACTaGGAGAAGAAGGGGCGTAAC | + |
Preference number: 5 (lower is better) Translates to: FLHHSGGTATRTRFPCLGRSCCY*EKKGRN Trigger: GTTACGCCCCTTCTTCTCCAAGTAGCAGCAACTCCG...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATCGGAGTTGCTGCTACTaGGAGAAGAAGGGGCGTAAC | + |
Preference number: 5 (lower is better) Translates to: LPLITCCCSTWHQATQIHRSCCY*EKKGRN Trigger: GTTACGCCCCTTCTTCTCCAAGTAGCAGCAACTCCG...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGATCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 5 (lower is better) Translates to: FLHHSGGTATRTRFPCLGSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATTCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 5 (lower is better) Translates to: LPLITCCCSTWHQATQIHSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
||
CDS-3UTR CAA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGAGAGCCTTGAGGGCTaGTGGCCCTGGAGTGGAATG | + |
Preference number: 5 (lower is better) Translates to: TDRIETSTDHLLLLYLASESLEG*WPWSGM Trigger: CATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTC...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTCAGACAACACGGCAGGGGCATAAGCATGCTTTCTACACCACTCTGGTGGGACAGATCCACCAAGAAATaGCTGCTCCAGTACTGCCTC | + |
Preference number: 5 (lower is better) Translates to: LRQHGRGISMLSTPLWWDRSTKK*LLQYCL Trigger: GAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCT...GTCCCACCAGAGTGGTGTAGAAAGCATGCTTATGCCCCTGCCGTGTTGTCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCGAGAAAGAGGCTCTCTaGTTTCCTGTCGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: ACFLHHSGGTATRTRFPCEKEAL*FPVVDM Trigger: CATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | GCATGCTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCTCCCTCAGGGAACTATaGTGTGCCATCTCCATGCTT | + |
Preference number: 5 (lower is better) Translates to: ACFLHHSGGTATRTRFPCSLREL*CAISML Trigger: AAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA...GCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAGCATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGAGATCCACCAAGAAATaGCTGCTCCAGTACTGCCTC | + |
Preference number: 5 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWRSTKK*LLQYCL Trigger: GAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCT...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCAGGCCACACAGATACATTCTGAGCAGAAGCTGTaGCTGCTAATCGTCCTTGCT | + |
Preference number: 5 (lower is better) Translates to: LPLITCCCSTWHQATQIHSEQKL*LLIVLA Trigger: AGCAAGGACGATTAGCAGCAACAGCTTCTGCTCAGA...ATGTATCTGTGTGGCCTGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTCGGAGTTGCTGCTACTaGGAGAAGAAGGGGCGTAAC | + |
Preference number: 5 (lower is better) Translates to: HASLRKAVVKVQTAFSLPRSCCY*EKKGRN Trigger: GTTACGCCCCTTCTTCTCCAAGTAGCAGCAACTCCG...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CTTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGTGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: LSTPLWWDSYQNQVSMPWCHLHA*KQRLQF Trigger: AAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCA...CCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: HASLRKAVVKVQTAFSLPLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | ATGAGTGCTATGCTGAGAGGTGACAAGCAGGGTAACATTTGTTTCCTTGATTATAAATGCCCTAGAGGCTaGTGCTGGACTGGGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: MSAMLRGDKQGNICFLDYKCPRG*CWTGPP Trigger: CGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTT...ATAATCAAGGAAACAAATGTTACCCTGCTTGTCACCTCTCAGCATAGCACTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS-3UTR CAA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCGAGGCTGGGGAAACCTaGTTCTGCTGCTGTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFEAGET*FCCCCC Trigger: GCAGCAACAGCAGCAGAACAAGGTTTCCCCAGCCTC...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TTTCTACACCACTCTGGTGGGACAGCTACCAGAACCAGGTTTCCATGCCTTGGATGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: FLHHSGGTATRTRFPCLGCHLHA*KQRLQF Trigger: AAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCA...TCCAAGGCATGGAAACCTGGTTCTGGTAGCTGTCCCACCAGAGTGGTGTAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TTATTTTTGGTTACAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAGAGAGCCTTGAGGGCTaGTGGCCCTGGAGTGGAATG | + |
Preference number: 5 (lower is better) Translates to: LFLVTVPCYAQEHWNAGTESLEG*WPWSGM Trigger: CATTCCACTCCAGGGCCACAAGCCCTCAAGGCTCTC...TGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTGTAACCAAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTTCTGAGCAGAAGCTGTaGCTGCTAATCGTCCTTGCT | + |
Preference number: 5 (lower is better) Translates to: HASLRKAVVKVQTAFSLPSEQKL*LLIVLA Trigger: AGCAAGGACGATTAGCAGCAACAGCTTCTGCTCAGA...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAAATGCCCTAGAGGCTaGTGCTGGACTGGGCCGCCG | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYKCPRG*CWTGPP Trigger: CGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 |
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CDS-3UTR CAA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGACTTGTTCTGCTGCTGTaGCTGCTGCTGAGGCCGATG | + |
Preference number: 5 (lower is better) Translates to: QASTDYSANQIARSKTDRLVLLL*LLLRPM Trigger: CATCGGCCTCAGCAGCAGCAACAGCAGCAGAACAAG...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGAGAGGCTGGGGAAACCTaGTTCTGCTGCTGTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: QASTDYSANQIARSKTDREAGET*FCCCCC Trigger: GCAGCAACAGCAGCAGAACAAGGTTTCCCCAGCCTC...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTGGGCTGCTGCCAGACTaGTGGGATGATGCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: NYTFSNGTKQSKEITCQPGLLPD*WDDAPL Trigger: CAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | ACTGACAGAATAGAGACTTCCACTGATCACCTGCTGTTGCTCTACCTGGCATCATGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: TDRIETSTDHLLLLYLASCHLHA*KQRLQF Trigger: AAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCA...TGATGCCAGGTAGAGCAACAGCAGGTGATCAGTGGAAGTCTCTATTCTGTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAACCAAGGGGAGAGCCTaGAGGGCTTGTGGCCCTGGA | + |
Preference number: 5 (lower is better) Translates to: NTSGLNSEQASTDYSANQTKGRA*RACGPG Trigger: TCCAGGGCCACAAGCCCTCAAGGCTCTCCCCTTGGT...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGAGGCTGGGGAAACCTaGTTCTGCTGCTGTTGCTGC | + |
Preference number: 5 (lower is better) Translates to: SEQASTDYSANQIARSKTEAGET*FCCCCC Trigger: GCAGCAACAGCAGCAGAACAAGGTTTCCCCAGCCTC...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTCGGAGTTGCTGCTACTaGGAGAAGAAGGGGCGTAAC | + |
Preference number: 5 (lower is better) Translates to: NYTFSNGTKQSKEITCQPRSCCY*EKKGRN Trigger: GTTACGCCCCTTCTTCTCCAAGTAGCAGCAACTCCG...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGACAGATCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 5 (lower is better) Translates to: QASTDYSANQIARSKTDRSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...TCTGTCAGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCTTGTTCTGCTGCTGTaGCTGCTGCTGAGGCCGATG | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYLVLLL*LLLRPM Trigger: CATCGGCCTCAGCAGCAGCAACAGCAGCAGAACAAG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACGGGCTGCTGCCAGACTaGTGGGATGATGCTCCATTG | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYGLLPD*WDDAPL Trigger: CAATGGAGCATCATCCCACAAGTCTGGCAGCAGCCC...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTTCAGACTCCTTCAGCTaGGTCCTCAGGTGCCTCACT | + |
Preference number: 5 (lower is better) Translates to: SEQASTDYSANQIARSKTSDSFS*VLRCLT Trigger: AGTGAGGCACCTGAGGACCAAGCTGAAGGAGTCTGA...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAGTCCCCTGCTATGCACAAGAGCATTGGAATGCTGGAACAATTACACATTTTCTGCCATCTCCATGCTTaGAAGCAGAGACTCCAGTTT | + |
Preference number: 5 (lower is better) Translates to: QSPAMHKSIGMLEQLHIFCHLHA*KQRLQF Trigger: AAACTGGAGTCTCTGCTTCAAAGCATGGAGATGGCA...GAAAATGTGTAATTGTTCCAGCATTCCAATGCTCTTGTGCATAGCAGGGGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTTAGAATCCCTCAGGGAACTATaGTGTGCCATCTCCATGCTT | + |
Preference number: 5 (lower is better) Translates to: HIFKRHKAKQGDNMPALESLREL*CAISML Trigger: AAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA...TTCTAAGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: SEQASTDYSANQIARSKTLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATACGGAGTTGCTGCTACTaGGAGAAGAAGGGGCGTAAC | + |
Preference number: 5 (lower is better) Translates to: TSGLNSEQASTDYSANQIRSCCY*EKKGRN Trigger: GTTACGCCCCTTCTTCTCCAAGTAGCAGCAACTCCG...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CATGCCAGCCTTAGAAAGGCTGTGGTGAAAGTGCAAACGGCATTTTCTCTTCCTAGAGACTCCAGTTTCTaGTTTTGGATGTTTATGTCC | + |
Preference number: 5 (lower is better) Translates to: HASLRKAVVKVQTAFSLPRDSSF*FWMFMS Trigger: GGACATAAACATCCAAAACAAGAAACTGGAGTCTCT...AGGAAGAGAAAATGCCGTTTGCACTTTCACCACAGCCTTTCTAAGGCTGGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AATTACACATTTTCAAACGGCACAAAGCAAAGCAAGGAGATAACATGCCAGCCTAGATCCACCAAGAAATaGCTGCTCCAGTACTGCCTC | + |
Preference number: 5 (lower is better) Translates to: NYTFSNGTKQSKEITCQPRSTKK*LLQYCL Trigger: GAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCT...AGGCTGGCATGTTATCTCCTTGCTTTGCTTTGTGCCGTTTGAAAATGTGTAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAAGCAAAACTGAGAAAGAGGCTCTCTaGTTTCCTGTCGTGGACATG | + |
Preference number: 5 (lower is better) Translates to: SEQASTDYSANQIARSKTEKEAL*FPVVDM Trigger: CATGTCCACGACAGGAAACAAGAGAGCCTCTTTCTC...AGTTTTGCTTCTCGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGCTGGAGATGCTGAGCTaGTGGGACAGTAGTCCTGCA | + |
Preference number: 5 (lower is better) Translates to: YQPQDDKELFKSLNQLHKLEMLS*WDSSPA Trigger: TGCAGGACTACTGTCCCACAAGCTCAGCATCTCCAG...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGATCCACCAAGAAATaGCTGCTCCAGTACTGCCTC | + |
Preference number: 5 (lower is better) Translates to: SGLNSEQASTDYSANQIARSTKK*LLQYCL Trigger: GAGGCAGTACTGGAGCAGCAATTTCTTGGTGGATCT...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACTCTGAGCAGAAGCTGTaGCTGCTAATCGTCCTTGCT | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYSEQKL*LLIVLA Trigger: AGCAAGGACGATTAGCAGCAACAGCTTCTGCTCAGA...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACTCCCTCAGGGAACTATaGTGTGCCATCTCCATGCTT | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYSLREL*CAISML Trigger: AAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | AATACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAATCCCTCAGGGAACTATaGTGTGCCATCTCCATGCTT | + |
Preference number: 5 (lower is better) Translates to: NTSGLNSEQASTDYSANQSLREL*CAISML Trigger: AAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA...TTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATATCCCTCAGGGAACTATaGTGTGCCATCTCCATGCTT | + |
Preference number: 5 (lower is better) Translates to: TSGLNSEQASTDYSANQISLREL*CAISML Trigger: AAGCATGGAGATGGCACACAATAGTTCCCTGAGGGA...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TATCAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTCTGAGCAGAAGCTGTaGCTGCTAATCGTCCTTGCT | + |
Preference number: 5 (lower is better) Translates to: YQPQDDKELFKSLNQLHKSEQKL*LLIVLA Trigger: AGCAAGGACGATTAGCAGCAACAGCTTCTGCTCAGA...CTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | TCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAGCGAGAGACTCCAGTTTCTaGTTTTGGATGTTTATGTCC | + |
Preference number: 5 (lower is better) Translates to: SGLNSEQASTDYSANQIARDSSF*FWMFMS Trigger: GGACATAAACATCCAAAACAAGAAACTGGAGTCTCT...CGCTATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | ACCTCTGGTTTAAACAGTGAACAGGCTTCAACTGACTATAGTGCAAATCAAATAAGAGACTCCAGTTTCTaGTTTTGGATGTTTATGTCC | + |
Preference number: 5 (lower is better) Translates to: TSGLNSEQASTDYSANQIRDSSF*FWMFMS Trigger: GGACATAAACATCCAAAACAAGAAACTGGAGTCTCT...TATTTGATTTGCACTATAGTCAGTTGAAGCCTGTTCACTGTTTAAACCAGAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS-3UTR CAA 90 bp | CAACCTCAAGACGATAAAGAGCTATTCAAGTCTTTGAACCAATTACACAAGTACAGAGACTCCAGTTTCTaGTTTTGGATGTTTATGTCC | + |
Preference number: 5 (lower is better) Translates to: QPQDDKELFKSLNQLHKYRDSSF*FWMFMS Trigger: GGACATAAACATCCAAAACAAGAAACTGGAGTCTCT...GTACTTGTGTAATTGGTTCAAAGACTTGAATAGCTCTTTATCGTCTTGAGGTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CAA 90 bp | GCTGGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGCAAGCGGTTaGCGCTGGGGCTGGAGGAACCAGCCCCGGCCCGCTCCGCCCGCG | + |
Preference number: 6 (lower is better) Translates to: AGLGRRPATQRVASG*RWGWRNQPRPAPPA Trigger: CGCGGGCGGAGCGGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 72 bp | GCCGCCGGCCGGCGACACAGCGCGTGGCAAGCGGTTTaGGCTGGGGCTGGAGGAACCAGCCCCGGCCCGCTC | + |
Preference number: 6 (lower is better) Translates to: AAGRRHSAWQAV*AGAGGTSPGPL Trigger: GAGCGGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGCGCTGTGTCGCCGGCCGGCGGC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CCA 72 bp | CGGCCGGCGACACAGCGCGTGGCAAGCGGTTTGCGCTaGGGCTGGAGGAACCAGCCCCGGCCCGCTCCGCCC | + |
Preference number: 6 (lower is better) Translates to: RPATQRVASGLR*GWRNQPRPAPP Trigger: GGGCGGAGCGGGCCGGGGCTGGTTCCTCCAGCCCCAGCGCAAACCGCTTGCCACGCGCTGTGTCGCCGGCCG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 72 bp | ATTTCGCTGCTGCCTGCCGGCTCCCCACGCCGCCGCTaGCGCCGCCGCCGCCGTCCAGGAGGAGGCACCGTT | + |
Preference number: 6 (lower is better) Translates to: ISLLPAGSPRRR*RRRRRPGGGTV Trigger: AACGGTGCCTCCTCCTGGACGGCGGCGGCGGCGGCAGCGGCGGCGTGGGGAGCCGGCAGGCAGCAGCGAAAT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS TCA 72 bp | GGCAGCTGCCAGCGCGCTCCGGTCCCCTCGGCCTCTTaGCTTCTGGAGCCAGCACGGCGGCACCTGGGGCTT | + |
Preference number: 6 (lower is better) Translates to: GSCQRAPVPSAS*LLEPARRHLGL Trigger: AAGCCCCAGGTGCCGCCGTGCTGGCTCCAGAAGTCAAGAGGCCGAGGGGACCGGAGCGCGCTGGCAGCTGCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CCA 72 bp | CCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGCTaGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGC | + |
Preference number: 6 (lower is better) Translates to: PDSVPKCPRGLC*TGPPAGDTARG Trigger: GCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CAA 72 bp | CGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTaGTGCTGGACTGGGCCGCCGGCCGGCGACACAGCG | + |
Preference number: 6 (lower is better) Translates to: RCPDSVPKCPRG*CWTGPPAGDTA Trigger: CGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 72 bp | TGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTaGTGGACTGGGCCGCCGGCCGGCGACACAGCGCGT | + |
Preference number: 6 (lower is better) Translates to: CPDSVPKCPRGL*WTGPPAGDTAR Trigger: ACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CAA 90 bp | TGTCCATTGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTaGTGCTGGACTGGGCCGCCGGCCGGCGACACAGCGCGTGGCAAG | + |
Preference number: 6 (lower is better) Translates to: CPLRCPDSVPKCPRG*CWTGPPAGDTARGK Trigger: CTTGCCACGCGCTGTGTCGCCGGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS GCA 72 bp | CCGTGTCCATTGCGCTGTCCAGACAGTGTCCCCAAATaGCCTAGAGGCTTGTGCTGGACTGGGCCGCCGGCC | + |
Preference number: 6 (lower is better) Translates to: PCPLRCPDSVPK*PRGLCWTGPPA Trigger: GGCCGGCGGCCCAGTCCAGCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090057.6 ENSMUST00000226214.2 ENSMUST00000228639.2 |
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CDS CAA 72 bp | GCCGCCGCCGCCGTCCAGGAGGAGGCACCGTTTCCTTaGCAGACCGTGTCCATTGCGCTGTCCAGACAGTGT | + |
Preference number: 6 (lower is better) Translates to: AAAAVQEEAPFP*QTVSIALSRQC Trigger: ACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGGTGCCTCCTCCTGGACGGCGGCGGCGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS CAA 90 bp | CCGCCGTCCAGGAGGAGGCACCGTTTCCTTTGCAGACCGTGTCCATaGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGC | + |
Preference number: 6 (lower is better) Translates to: PPSRRRHRFLCRPCP*RCPDSVPKCPRGLC Trigger: GCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGGTGCCTCCTCCTGGACGGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS GCA 72 bp | GGAGGAGGCACCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAG | + |
Preference number: 6 (lower is better) Translates to: GGGTVSFADRVH*AVQTVSPNALE Trigger: CTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGGTGCCTCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090057.6 |
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CDS TCA 72 bp | TCCAGGGCAAAAGCCAATGGGACTGTGCCCTGTGTCTaGAGGAGTCTTCACAGGCGATACCGACTGGCTGCT | + |
Preference number: 6 (lower is better) Translates to: SRAKANGTVPCV*RSLHRRYRLAA Trigger: AGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CAA 90 bp | TGCTGGGACAACCTGTGTCATCGTTTCCTTTGCAGACCGTGTCCATaGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGC | + |
Preference number: 6 (lower is better) Translates to: CWDNLCHRFLCRPCP*RCPDSVPKCPRGLC Trigger: GCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS GCA 72 bp | CCCAGATCCATCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAG | + |
Preference number: 6 (lower is better) Translates to: PRSIVSFADRVH*AVQTVSPNALE Trigger: CTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGGATCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS GCA 72 bp | ACTGGCTGCTGGGACAACCTGTGTCATCGTTTCCTTTaGAGACCGTGTCCATTGCGCTGTCCAGACAGTGTC | + |
Preference number: 6 (lower is better) Translates to: TGCWDNLCHRFL*RPCPLRCPDSV Trigger: GACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS CCA 72 bp | CCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTaGCTGCTGGGACAACCTGTGTCATCTGAGCAGAAG | + |
Preference number: 6 (lower is better) Translates to: PVSEGVFTGDTD*LLGQPVSSEQK Trigger: CTTCTGCTCAGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CCA 72 bp | CTGAAGGAGTCTTCACAGGCGATACCGACTGGCTGCTaGGACAACCTGTGTCATCGTTTCCTTTGCAGACCG | + |
Preference number: 6 (lower is better) Translates to: LKESSQAIPTGC*DNLCHRFLCRP Trigger: CGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110269.8 |
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CDS CAA 72 bp | CTGCTGGGACAACCTGTGTCATCTGAGCAGAAGCTGTaGCTGCTAATCGTCCTTGCTGAGCGTCCAGAGCTG | + |
Preference number: 6 (lower is better) Translates to: LLGQPVSSEQKL*LLIVLAERPEL Trigger: CAGCTCTGGACGCTCAGCAAGGACGATTAGCAGCAACAGCTTCTGCTCAGATGACACAGGTTGTCCCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CAA 72 bp | GACTGGCTGCTGGGACAACCTGTGTCATCGTTTCCTTaGCAGACCGTGTCCATTGCGCTGTCCAGACAGTGT | + |
Preference number: 6 (lower is better) Translates to: DWLLGQPVSSFP*QTVSIALSRQC Trigger: ACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS CAA 90 bp | ACCAATTCTCCCCAGATCCATCGTTTCCTTTGCAGACCGTGTCCATaGCGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAGGCTTGTGC | + |
Preference number: 6 (lower is better) Translates to: TNSPQIHRFLCRPCP*RCPDSVPKCPRGLC Trigger: GCACAAGCCTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGGATCTGGGGAGAATTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228639.2 |
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CDS GCA 72 bp | TGTCTGAAGGAGTCTTCACAGGCGATACCGACTGGCTaGTGGGACAACCTGTGTCATCTGAGCAGAAGCTGT | + |
Preference number: 6 (lower is better) Translates to: CLKESSQAIPTG*WDNLCHLSRSC Trigger: ACAGCTTCTGCTCAGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS GCA 72 bp | TCTTCATCGCTTCCAGGGCAAAAGCCAATGGGACTGTaGCCTGTGTCTGAAGGAGTCTTCACAGGCGATACC | + |
Preference number: 6 (lower is better) Translates to: SSSLPGQKPMGL*PVSEGVFTGDT Trigger: GGTATCGCCTGTGAAGACTCCTTCAGACACAGGGCACAGTCCCATTGGCTTTTGCCCTGGAAGCGATGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000110269.8 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS GCA 72 bp | ACCTGTGTCATCGTTTCCTTTGCAGACCGTGTCCATTaGGCTGTCCAGACAGTGTCCCCAAATGCCCTAGAG | + |
Preference number: 6 (lower is better) Translates to: TCVIVSFADRVH*AVQTVSPNALE Trigger: CTCTAGGGCATTTGGGGACACTGTCTGGACAGCGCAATGGACACGGTCTGCAAAGGAAACGATGACACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000226214.2 |
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CDS CCA 72 bp | TCTACTTTCTTCCTCCGAAAAGGGAGACTCGGAGGCTaGGGAAACCTTGTTCTGCTGCTGTTGCTGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: STFFLRKGRLGG*GNLVLLLLLLL Trigger: CAGCAGCAGCAACAGCAGCAGAACAAGGTTTCCCCAGCCTCCGAGTCTCCCTTTTCGGAGGAAGAAAGTAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090057.6 ENSMUST00000110267.9 ENSMUST00000227305.2 ENSMUST00000228057.2 |
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CDS CCA 72 bp | CCTGTGTCTGAAGGAGTCTTCACAGGCGATACCGACTaGCTGCTGGGACAACCTGTGTCATCGTTTCCTTTG | + |
Preference number: 6 (lower is better) Translates to: PVSEGVFTGDTD*LLGQPVSSFPL Trigger: CAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACACAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110269.8 |
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CDS GCA 72 bp | TGTCTGAAGGAGTCTTCACAGGCGATACCGACTGGCTaGTGGGACAACCTGTGTCATCGTTTCCTTTGCAGA | + |
Preference number: 6 (lower is better) Translates to: CLKESSQAIPTG*WDNLCHRFLCR Trigger: TCTGCAAAGGAAACGATGACACAGGTTGTCCCAGCAGCCAGTCGGTATCGCCTGTGAAGACTCCTTCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110269.8 |