Pregenerated sensors for SYAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031357Ensembl transcript IDs: ENSMUST00000033723.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTGACTATTACCAGGAGAACAAACCTTACGGTAAACAGGCTTCTTaGCAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACA | + |
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Preference number: 1 (lower is better) Translates to: SDYYQENKPYGKQAS*QLLIQKGLKTSVPT Trigger: TGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTGTCAAGAAGCCTGTTTACCGTAAGGTTTGTTCTCCTGGTAATAGTCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCTGACTCAGCGATCATaGGAATTTCATGTCACACAA | + |
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Preference number: 2 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTLTQRS*EFHVTQ Trigger: TTGTGTGACATGAAATTCTCATGATCGCTGAGTCAG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR-3UTR TCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGGCTTGCACTTTTAGCTaGGATAGTGGAAATGGAACC | + |
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Preference number: 2 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLACTFS*DSGNGT Trigger: GGTTCCATTTCCACTATCTCAGCTAAAAGTGCAAGC...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR-3UTR TCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCTTAACAAAGCAAAATaGGAAGGCTCTAGGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTLNKAK*EGSREK Trigger: CTTCTCCCTAGAGCCTTCTCATTTTGCTTTGTTAAG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR-3UTR CCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGTTCAGCATGTCAAACTaGGTGATATTTATGTCATTC | + |
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Preference number: 2 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLFSMSN*VIFMSF Trigger: GAATGACATAAATATCACCCAGTTTGACATGCTGAA...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR TCA 72 bp | TACCAGGAGAACAAACCTTACGGTAAACAGGCTTCTTaGCAGTTATTAATACAAAAAGGACTGAAGACCTCA | + |
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Preference number: 3 (lower is better) Translates to: YQENKPYGKQAS*QLLIQKGLKTS Trigger: TGAGGTCTTCAGTCCTTTTTGTATTAATAACTGTCAAGAAGCCTGTTTACCGTAAGGTTTGTTCTCCTGGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| 3UTR TCA 72 bp | TCCTGCACAGAAAGTGTTTCAGCATGTCAAACTGGGTaGTATTTATGTCATTCAAGTGAACAGAAATATCTC | + |
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Preference number: 3 (lower is better) Translates to: SCTESVSACQTG*YLCHSSEQKYL Trigger: GAGATATTTCTGTTCACTTGAATGACATAAATATCACCCAGTTTGACATGCTGAAACACTTTCTGTGCAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGGGCGGCTGCTGCTGCTaGTCCTCAGTGGGCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTGGCCC*SSVGST Trigger: CGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCC...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGCTGCTGCTCCTCAGTaGGCTCCACGGGCCGCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVAAAPQ*APRAAR Trigger: CCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGC...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGTCGGCGGCTGCTGCTaGTGCTCCTCAGTGGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVVGGCC*CSSVGS Trigger: GGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGAC...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGTGTCCCCGTCCCGGCTaGGAGGCTCTTCTCCCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLCPRPG*EALLPP Trigger: CGGAGGGAGAAGAGCCTCCCAGCCGGGACGGGGACA...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGTCCTCCGTCGGCGGCTaGTGCTGCTGCTCCTCAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLSSVGG*CCCSSV Trigger: CACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGA...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCTGCTGAGCGGCCAGTaGAGTGAGTTGGGCCGACTG | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTLLSGQ*SELGRL Trigger: CAGTCGGCCCAACTCACTGCACTGGCCGCTCAGCAG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTCCAGAGGCTTGCTGCTaGGCGGCCAGTGCAGTGAGT | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVPEACC*AASAVS Trigger: ACTCACTGCACTGGCCGCTCAGCAGCAAGCCTCTGG...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCCAAGGCCTTTGGCCTaGTGGAGGAACTGTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTPRPLA*WRNCGS Trigger: GGACCCACAGTTCCTCCACCAGGCCAAAGGCCTTGG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGACATCCTCTTGGAGCATaGCCAGGGCAACAGGGTACA | + |
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Preference number: 4 (lower is better) Translates to: FVPSDSAIMRISCHTMLRHPLGA*PGQQGT Trigger: TGTACCCTGTTGCCCTGGTCATGCTCCAAGAGGATG...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGAGTGAGTTGGGCCGACTaGTTAATCAGGGAGATTCGG | + |
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Preference number: 4 (lower is better) Translates to: FVPSDSAIMRISCHTMLRVSWAD*LIREIR Trigger: CCGAATCTCCCTGATTAAGCAGTCGGCCCAACTCAC...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGAATTGTCTCTTCATCATaGCTCTCAACCCACGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: FVPSDSAIMRISCHTMLRIVSSS*LSTHGG Trigger: GCCTCCGTGGGTTGAGAGTCATGATGAAGAGACAAT...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTCTGCACACCAGCTGGTaGGTCACGGAGGAAATTCCT | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVLHTSW*VTEEIP Trigger: AGGAATTTCCTCCGTGACCCACCAGCTGGTGTGCAG...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGCCAGTGCAGTGAGTTaGGCCGACTGCTTAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVASAVS*ADCLIR Trigger: CCTGATTAAGCAGTCGGCCCAACTCACTGCACTGGC...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGCGACAGGTGGTGTTTTaGGCCGTACTGCCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLRQVVF*AVLPLS Trigger: TGACAGAGGCAGTACGGCCCAAAACACCACCTGTCG...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGATTTGATTACGACAGGTaGTGTTTTGGGCCGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: FVPSDSAIMRISCHTMLRFDYDR*CFGPYC Trigger: GCAGTACGGCCCAAAACACCACCTGTCGTAATCAAA...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCCTCCTGATTTAAGCTaGACGTATCGAAGGCATCAC | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTPPDLS*TYRRHH Trigger: GTGATGCCTTCGATACGTGCAGCTTAAATCAGGAGG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTAGTAGCTCATCCTCTTaGAGCATGACCAGGGCAACA | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVSSSSS*SMTRAT Trigger: TGTTGCCCTGGTCATGCTCCAAGAGGATGAGCTACT...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGCTTCCACGGATTTCTTaGTTGTCTGAGCTGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTLPRIS*LSELFL Trigger: CAGAAACAGCTCAGACAATCAAGAAATCCGTGGAAG...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR GCA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGAAGTCAAAGTTAAACTaGACACCAGCTGGTGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLKSKLN*TPAGGS Trigger: TGACCCACCAGCTGGTGTGCAGTTTAACTTTGACTT...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CCA 90 bp | GATCATGAGAATTTCATGTCACACAATGTTAAGAACTGGTTTGCGGAGACAATTAAACTCAGAAACTCCTaGGCTAGTAGAGATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: DHENFMSHNVKNWFAETIKLRNS*ASRDFL Trigger: GAGGAAATCTCTACTAGCCCAGGAGTTTCTGAGTTT...AATTGTCTCCGCAAACCAGTTCTTAACATTGTGTGACATGAAATTCTCATGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | CAGTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGGATTTCTTGATTGTCTaGGCTGTTTCTGTAACAGAT | + |
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Preference number: 4 (lower is better) Translates to: QLLIQKGLKTSVPTKSTTDFLIV*AVSVTD Trigger: ATCTGTTACAGAAACAGCTCAGACAATCAAGAAATC...CGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR TCA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGCAACAGGGTACATCTaGTCAAAGTCAAAGTTAAAC | + |
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Preference number: 4 (lower is better) Translates to: VINTKRTEDLSSYKKHNVATGYI*SKSKLN Trigger: GTTTAACTTTGACTTTGATCAGATGTACCCTGTTGC...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CCA 90 bp | GGAACTGTGGGTCCTCCGTCGGCGGCTGCTGCTGCTGCTCCTCAGTaGGCTCCACGGGCCGCTCGGGGCTCTCCTCAGAAGGCGCGGCTC | + |
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Preference number: 5 (lower is better) Translates to: GTVGPPSAAAAAAPQ*APRAARGSPQKARL Trigger: GAGCCGCGCCTTCTGAGGAGAGCCCCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | CCTTTGGCCTGGTGGAGGAACTGTGGGTCCTCCGTCGGCGGCTGCTaGTGCTGCTCCTCAGTGGGCTCCACGGGCCGCTCGGGGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PLAWWRNCGSSVGGC*CCSSVGSTGRSGLS Trigger: GGAGAGCCCCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCACCAGGCCAAAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | AGGCCTTTGGCCTGGTGGAGGAACTGTGGGTCCTCCGTCGGCGGCTaGTGCTGCTGCTCCTCAGTGGGCTCCACGGGCCGCTCGGGGCTC | + |
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Preference number: 5 (lower is better) Translates to: RPLAWWRNCGSSVGG*CCCSSVGSTGRSGL Trigger: GAGCCCCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCACCAGGCCAAAGGCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | TTGGCCTGGTGGAGGAACTGTGGGTCCTCCGTCGGCGGCTGCTGCTaGTGCTCCTCAGTGGGCTCCACGGGCCGCTCGGGGCTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LAWWRNCGSSVGGCC*CSSVGSTGRSGLSS Trigger: TGAGGAGAGCCCCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCACCAGGCCAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | CAGTTATCTTCTTTGTTGCAGCACTTGCAAAGTTATACAAATAATTaGCAAGGCCTTTGGCCTGGTGGAGGAACTGTGGGTCCTCCGTCG | + |
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Preference number: 5 (lower is better) Translates to: QLSSLLQHLQSYTNN*QGLWPGGGTVGPPS Trigger: CGACGGAGGACCCACAGTTCCTCCACCAGGCCAAAGGCCTTGGCAATTATTTGTATAACTTTGCAAGTGCTGCAACAAAGAAGATAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTCTCCTTTCCAGAGGCTaGCTGCTGAGCGGCCAGTGC | + |
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Preference number: 5 (lower is better) Translates to: VINTKRTEDLSSYKKHNVLLSRG*LLSGQC Trigger: GCACTGGCCGCTCAGCAGCAAGCCTCTGGAAAGGAG...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGAACGACAGGTGGTGTTTaGGGCCGTACTGCCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: FVPSDSAIMRISCHTMLRTTGGV*GRTASV Trigger: GACAGAGGCAGTACGGCCCAAAACACCACCTGTCGT...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GATCATGAGAATTTCATGTCACACAATGTTAAGAACTGGTTTGCGGAGACAATTGGCCAGTGCAGTGAGTaGGGCCGACTGCTTAATCAG | + |
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Preference number: 5 (lower is better) Translates to: DHENFMSHNVKNWFAETIGQCSE*GRLLNQ Trigger: CTGATTAAGCAGTCGGCCCAACTCACTGCACTGGCC...AATTGTCTCCGCAAACCAGTTCTTAACATTGTGTGACATGAAATTCTCATGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | AGCTGTTTCTGTAACAGATTCAGTTATCTTCTTTGTTGCAGCACTTaGAAAGTTATACAAATAATTGCCAAGGCCTTTGGCCTGGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SCFCNRFSYLLCCST*KVIQIIAKAFGLVE Trigger: CTCCACCAGGCCAAAGGCCTTGGCAATTATTTGTATAACTTTGCAAGTGCTGCAACAAAGAAGATAACTGAATCTGTTACAGAAACAGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGAAGGGCAAATCTCATCTaGCTTAGTAGCTCATCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FVPSDSAIMRISCHTMLRRANLI*LSSSSS Trigger: AGAGGATGAGCTACTAAGCAAGATGAGATTTGCCCT...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GATCATGAGAATTTCATGTCACACAATGTTAAGAACTGGTTTGCGGAGACAATTTGCAGTTGCTTCCTCTaGCTTCTTATCAAGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: DHENFMSHNVKNWFAETICSCFL*LLIKHK Trigger: CTTGTGCTTGATAAGAAGCAAGAGGAAGCAACTGCA...AATTGTCTCCGCAAACCAGTTCTTAACATTGTGTGACATGAAATTCTCATGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 90 bp | GATTGTCTGAGCTGTTTCTGTAACAGATTCAGTTATCTTCTTTGTTaGAGCACTTGCAAAGTTATACAAATAATTGCCAAGGCCTTTGGC | + |
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Preference number: 5 (lower is better) Translates to: DCLSCFCNRFSYLLC*STCKVIQIIAKAFG Trigger: GCCAAAGGCCTTGGCAATTATTTGTATAACTTTGCAAGTGCTGCAACAAAGAAGATAACTGAATCTGTTACAGAAACAGCTCAGACAATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTCGGAGGAAATTCCTCTaGTCAGCTGATAAAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: VINTKRTEDLSSYKKHNVRRKFL*SADKAK Trigger: TTTGGCTTTATCAGCTGACAAGAGGAATTTCCTCCG...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS TCA 90 bp | TTCTTATCAAGCACAAGTTGTTCCATTTCCTTTCTTAAATCCTCCTaGTTTAAGCTGCACGTATCGAAGGCATCACTAACAAACTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: FLSSTSCSISFLKSS*FKLHVSKASLTNSE Trigger: TTCTGAGTTTGTTAGTGATGCCTTCGATACGTGCAGCTTAAATCAGGAGGATTTAAGAAAGGAAATGGAACAACTTGTGCTTGATAAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGACAGTTATCTTCTTTGTaGCAGCACTTGCAAAGTTAT | + |
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Preference number: 5 (lower is better) Translates to: FVPSDSAIMRISCHTMLRQLSSL*QHLQSY Trigger: ATAACTTTGCAAGTGCTGCAACAAAGAAGATAACTG...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGAATTCAGTTATCTTCTTaGTTGCAGCACTTGCAAAGT | + |
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Preference number: 5 (lower is better) Translates to: FVPSDSAIMRISCHTMLRIQLSS*LQHLQS Trigger: ACTTTGCAAGTGCTGCAACAAAGAAGATAACTGAAT...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTTGTGCCTTCTGACTCAGCGATCATGAGAATTTCATGTCACACAATGTTAAGATTCCTCTTCATCCTCTaGACTTTTAAGCTGAGATTT | + |
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Preference number: 5 (lower is better) Translates to: FVPSDSAIMRISCHTMLRFLFIL*TFKLRF Trigger: AAATCTCAGCTTAAAAGTCAAGAGGATGAAGAGGAA...TCTTAACATTGTGTGACATGAAATTCTCATGATCGCTGAGTCAGAAGGCACAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS TCA 90 bp | AGGATATCATCTATTTTTCCTTCTTCCACGGATTTCTTGATTGTCTaGGCTGTTTCTGTAACAGATTCAGTTATCTTCTTTGTTGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RISSIFPSSTDFLIV*AVSVTDSVIFFVAA Trigger: TGCTGCAACAAAGAAGATAACTGAATCTGTTACAGAAACAGCTCAGACAATCAAGAAATCCGTGGAAGAAGGAAAAATAGATGATATCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | TTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTGAGCCAAAATCTGCTGTaGAATTGTCTCTTCATCATG | + |
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Preference number: 5 (lower is better) Translates to: LLIQKGLKTSVPTKSTTLSQNLL*NCLFIM Trigger: CATGATGAAGAGACAATTCAACAGCAGATTTTGGCT...CAACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTCTGCTTCTGACTTTTTaGTATTCTGTTCCTCAACAA | + |
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Preference number: 5 (lower is better) Translates to: VINTKRTEDLSSYKKHNVLLLTF*YSVPQQ Trigger: TTGTTGAGGAACAGAATACAAAAAAGTCAGAAGCAG...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS-3UTR CAA 90 bp | GTTATTAATACAAAAAGGACTGAAGACCTCAGTTCCTACAAAAAGCACAACGTTAAATCTGCTGTTGAATaGTCTCTTCATCATGACTCT | + |
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Preference number: 5 (lower is better) Translates to: VINTKRTEDLSSYKKHNVKSAVE*SLHHDS Trigger: AGAGTCATGATGAAGAGACAATTCAACAGCAGATTT...AACGTTGTGCTTTTTGTAGGAACTGAGGTCTTCAGTCCTTTTTGTATTAATAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | TGGAGGAACTGTGGGTCCTCCGTCGGCGGCTGCTGCTaGTGCTCCTCAGTGGGCTCCACGGGCCGCTCGGGG | + |
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Preference number: 6 (lower is better) Translates to: WRNCGSSVGGCC*CSSVGSTGRSG Trigger: CCCCGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | GCCTGGTGGAGGAACTGTGGGTCCTCCGTCGGCGGCTaGTGCTGCTGCTCCTCAGTGGGCTCCACGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: AWWRNCGSSVGG*CCCSSVGSTGR Trigger: GCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCACCAGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 72 bp | GGGCTCTCCTCAGAAGGCGCGGCTCCCGCGGACAGCTaGTCCCCGTCCCGGCTGGGAGGCTCTTCTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GLSSEGAAPADS*SPSRLGGSSPS Trigger: GGAGGGAGAAGAGCCTCCCAGCCGGGACGGGGACAAGCTGTCCGCGGGAGCCGCGCCTTCTGAGGAGAGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | TGGTGGAGGAACTGTGGGTCCTCCGTCGGCGGCTGCTaGTGCTGCTCCTCAGTGGGCTCCACGGGCCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: WWRNCGSSVGGC*CCSSVGSTGRS Trigger: CGAGCGGCCCGTGGAGCCCACTGAGGAGCAGCAGCAGCAGCCGCCGACGGAGGACCCACAGTTCCTCCACCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | TTCCTCCTTTCCAGAGGCTTGCTGCTGAGCGGCCAGTaGAGTGAGTTGGGCCGACTGCTTAATCAGGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FLLSRGLLLSGQ*SELGRLLNQGD Trigger: ATCTCCCTGATTAAGCAGTCGGCCCAACTCACTGCACTGGCCGCTCAGCAGCAAGCCTCTGGAAAGGAGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 72 bp | TCCAGAGGCTTGCTGCTGAGCGGCCAGTGCAGTGAGTaGGGCCGACTGCTTAATCAGGGAGATTCGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: SRGLLLSGQCSE*GRLLNQGDSVE Trigger: TTCTACCGAATCTCCCTGATTAAGCAGTCGGCCCAACTCACTGCACTGGCCGCTCAGCAGCAAGCCTCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 90 bp | TTCCTCCTTTCCAGAGGCTTGCTGCTGAGCGGCCAGTGCAGTGAGTaGGGCCGACTGCTTAATCAGGGAGATTCGGTAGAAGTAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: FLLSRGLLLSGQCSE*GRLLNQGDSVEVVP Trigger: AGGAACTACTTCTACCGAATCTCCCTGATTAAGCAGTCGGCCCAACTCACTGCACTGGCCGCTCAGCAGCAAGCCTCTGGAAAGGAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | AGATTTGATTACGACAGGTGGTGTTTTGGGCCGTACTaGCTCTGTCAGAGGCAAGTTATCATCTCTGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RFDYDRWCFGPY*LCQRQVIISVA Trigger: AGCAACAGAGATGATAACTTGCCTCTGACAGAGGCAGTACGGCCCAAAACACCACCTGTCGTAATCAAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 90 bp | GGAAATTCCTCTTGTCAGCTGATAAAGCCAAAATCTGCTGTTGAATaGTCTCTTCATCATGACTCTCAACCCACGGAGGCACAGCTGCTT | + |
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Preference number: 6 (lower is better) Translates to: GNSSCQLIKPKSAVE*SLHHDSQPTEAQLL Trigger: AAGCAGCTGTGCCTCCGTGGGTTGAGAGTCATGATGAAGAGACAATTCAACAGCAGATTTTGGCTTTATCAGCTGACAAGAGGAATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 90 bp | AATACTTCTTCCTTCACAAGTTTAGGAACAAGGGCAAATCTCATCTaGCTTAGTAGCTCATCCTCTTGGAGCATGACCAGGGCAACAGGG | + |
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Preference number: 6 (lower is better) Translates to: NTSSFTSLGTRANLI*LSSSSSWSMTRATG Trigger: CCCTGTTGCCCTGGTCATGCTCCAAGAGGATGAGCTACTAAGCAAGATGAGATTTGCCCTTGTTCCTAAACTTGTGAAGGAAGAAGTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS TCA 72 bp | ATCTCATCTTGCTTAGTAGCTCATCCTCTTGGAGCATaGCCAGGGCAACAGGGTACATCTGATCAAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: ISSCLVAHPLGA*PGQQGTSDQSQ Trigger: TTGACTTTGATCAGATGTACCCTGTTGCCCTGGTCATGCTCCAAGAGGATGAGCTACTAAGCAAGATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 72 bp | TCCTTCACAAGTTTAGGAACAAGGGCAAATCTCATCTaGCTTAGTAGCTCATCCTCTTGGAGCATGACCAGG | + |
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Preference number: 6 (lower is better) Translates to: SFTSLGTRANLI*LSSSSSWSMTR Trigger: CCTGGTCATGCTCCAAGAGGATGAGCTACTAAGCAAGATGAGATTTGCCCTTGTTCCTAAACTTGTGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS CAA 72 bp | TCTTGTCAGCTGATAAAGCCAAAATCTGCTGTTGAATaGTCTCTTCATCATGACTCTCAACCCACGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCQLIKPKSAVE*SLHHDSQPTEA Trigger: TGCCTCCGTGGGTTGAGAGTCATGATGAAGAGACAATTCAACAGCAGATTTTGGCTTTATCAGCTGACAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS GCA 72 bp | TCAGTAGAATCTTCTTCTAGTGCAGTTGCTTCCTCTTaGTTCTTATCAAGCACAAGTTGTTCCATTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: SVESSSSAVASS*FLSSTSCSISF Trigger: AAAGGAAATGGAACAACTTGTGCTTGATAAGAAGCAAGAGGAAGCAACTGCACTAGAAGAAGATTCTACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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| CDS TCA 72 bp | TCTATTTTTCCTTCTTCCACGGATTTCTTGATTGTCTaGGCTGTTTCTGTAACAGATTCAGTTATCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: SIFPSSTDFLIV*AVSVTDSVIFF Trigger: AAAGAAGATAACTGAATCTGTTACAGAAACAGCTCAGACAATCAAGAAATCCGTGGAAGAAGGAAAAATAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033723.4 |
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