Pregenerated sensors for SWT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052748Ensembl transcript IDs: ENSMUST00000064771.12, ENSMUST00000111883.9, ENSMUST00000129939.2, ENSMUST00000141977.3
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTCACACCACCCTCTGCTTCTGGCCTCCATATAGACAGATGCACTaGACTGCTGCATGGTGCATTCCATCTCAATCAGCTGGCGGCATC | + |
|
Preference number: 1 (lower is better) Translates to: LHTTLCFWPPYRQMH*TAAWCIPSQSAGGI Trigger: GATGCCGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCAGAGGGTGGTGTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR GCA 90 bp | CATGTCTTCACACCACCCTCTGCTTCTGGCCTCCATATAGACAGATaGACTGCACTGCTGCATGGTGCATTCCATCTCAATCAGCTGGCG | + |
|
Preference number: 1 (lower is better) Translates to: HVFTPPSASGLHIDR*TALLHGAFHLNQLA Trigger: CGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCAGAGGGTGGTGTGAAGACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CCA 90 bp | AGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTaGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: SASHVRGSIRGALSY*KRTGNDIAKAATEK Trigger: CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CCA 90 bp | CTCTGCTTCTGGCCTCCATATAGACAGATGCACTGCACTGCTGCATaGTGCATTCCATCTCAATCAGCTGGCGGCATCCAATGGTTAATC | + |
|
Preference number: 1 (lower is better) Translates to: LCFWPPYRQMHCTAA*CIPSQSAGGIQWLI Trigger: GATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCAGAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR GCA 90 bp | TGCTTCTGGCCTCCATATAGACAGATGCACTGCACTGCTGCATGGTaGATTCCATCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTT | + |
|
Preference number: 1 (lower is better) Translates to: CFWPPYRQMHCTAAW*IPSQSAGGIQWLIF Trigger: AAAGATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CCA 90 bp | CCATGTGGAATGTGGTGGCATGGTCATGTCTTAAGTCTTGGGGTTTaGCAGTGTCTGGTCATGTGTTCACATTCAGGGTTAGGAGAGATA | + |
|
Preference number: 1 (lower is better) Translates to: PCGMWWHGHVLSLGV*QCLVMCSHSGLGEI Trigger: TATCTCTCCTAACCCTGAATGTGAACACATGACCAGACACTGCCAAACCCCAAGACTTAAGACATGACCATGCCACCACATTCCACATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CCA 90 bp | TCTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTaGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTCAAT | + |
|
Preference number: 1 (lower is better) Translates to: SLLLRGRKYCQLQKS*GTVYTTLDSMRLVN Trigger: ATTGACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTCTGCCTCAGGAACACTaGGAAGATGGCTCTCTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: RGALSYWKRTGNDIAKAALPQEH*EDGSLS Trigger: AGAGAGAGAGCCATCTTCTCAGTGTTCCTGAGGCAG...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAAGCCCATGTGGAATGTaGTGGCATGGTCATGTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: EGLFPTGNAQEMTSPKQLSPCGM*WHGHVL Trigger: TAAGACATGACCATGCCACCACATTCCACATGGGCT...TAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGTGTCACAGTGATTCCTaGCTCAGGAACACTGAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LSYWKRTGNDIAKAATEKCHSDS*LRNTEK Trigger: CTTCTCAGTGTTCCTGAGGCAGGAATCACTGTGACA...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR GCA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCACAGATGCACTGCACTaGTGCATGGTGCATTCCATC | + |
|
Preference number: 2 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFTDALH*CMVHSI Trigger: GATGGAATGCACCATGCAGCAGTGCAGTGCATCTGT...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR CCA 90 bp | AAATCCAGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTGGCAACTCCAGAAGAGCTaGGGTACAGTTTATACTACA | + |
|
Preference number: 2 (lower is better) Translates to: KSSASHVRGSIRGALSYWQLQKS*GTVYTT Trigger: TGTAGTATAAACTGTACCCCAGCTCTTCTGGAGTTG...CCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCTGGATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR CCA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCACCACCCTCTGCTTCTaGCCTCCATATAGACAGATG | + |
|
Preference number: 2 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFTTLCF*PPYRQM Trigger: CATCTGTCTATATGGAGGCCAGAAGCAGAGGGTGGT...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGGAACACTGAGAAGATaGCTCTCTCTCTTCTCCTTA | + |
|
Preference number: 2 (lower is better) Translates to: LSYWKRTGNDIAKAATEKGTLRR*LSLFSL Trigger: TAAGGAGAAGAGAGAGAGCCATCTTCTCAGTGTTCC...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTACTCAGTCTGAGAATCCAGGAAAACGTTaGCATCTTGGTTATGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: SQSAGGIQWLIFPGTQSENPGKR*HLGYEA Trigger: AGCTTCATAACCAAGATGTCAACGTTTTCCTGGATT...CTCAGACTGAGTACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAATTACTGTGTCACTTATaGAGACAGAGATGCTGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KRTGNDIAKAATEKVLVQLLCHL*RQRCCS Trigger: GGAACAGCATCTCTGTCTTCATAAGTGACACAGTAA...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR TCA 90 bp | TCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTACTCAGTCTGAGACATCTGTGCTGTTCTaGTATATTGACATCCAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SQSAGGIQWLIFPGTQSETSVLF*YIDIQT Trigger: TGTTTGGATGTCAATATATCAGAACAGCACAGATGT...CTCAGACTGAGTACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCACTTATGAAGACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTTATAGACAGATGCACTaGACTGCTGCATGGTGCATT | + |
|
Preference number: 2 (lower is better) Translates to: VTYEDRDAVPAVNLRPVVYRQMH*TAAWCI Trigger: AATGCACCATGCAGCAGTGCAGTGCATCTGTCTATA...AACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTCTTCATAAGTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR GCA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCAGCTTCTTCAAAGGATaGTATTTTCGAAGTTGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFSFFKG*YFRSCQ Trigger: CTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCT...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTGGGTTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCTTAAGTCTTGGGGTTTaGCAGTGTCTGGTCATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: GGFSHQFYINDSLFMKAALSLGV*QCLVMC Trigger: ACACATGACCAGACACTGCCAAACCCCAAGACTTAA...GGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAACCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR TCA 90 bp | GTCACTTATGAAGACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGGAGCCAAAATCCTTTaGATTCCTTCAAGAATATCT | + |
|
Preference number: 2 (lower is better) Translates to: VTYEDRDAVPAVNLRPVVGAKIL*IPSRIS Trigger: AGATATTCTTGAAGGAATTCAAAGGATTTTGGCTCC...AACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTCTTCATAAGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CAA 90 bp | ACACAAAAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTaGAACTTGAGTCCAGTGTTTGAAATACATCTGTGCTGTTCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TQKLLQRMLFSKLSG*NLSPVFEIHLCCSD Trigger: ATCAGAACAGCACAGATGTATTTCAAACACTGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTTTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR TCA 72 bp | GACATCCAAACACTCTCCAGGACAGACCAGATTTCCTaGTGCCTGGTGGCCTGGGGAAGATTAGAATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DIQTLSRTDQIS*CLVAWGRLESR Trigger: CCTGGATTCTAATCTTCCCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR GCA 72 bp | CCTCCATATAGACAGATGCACTGCACTGCTGCATGGTaGATTCCATCTCAATCAGCTGGCGGCATCCAATGG | + |
|
Preference number: 3 (lower is better) Translates to: PPYRQMHCTAAW*IPSQSAGGIQW Trigger: CCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CCA 72 bp | TGGCCTCCATATAGACAGATGCACTGCACTGCTGCATaGTGCATTCCATCTCAATCAGCTGGCGGCATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WPPYRQMHCTAA*CIPSQSAGGIQ Trigger: TTGGATGCCGCCAGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR GCA 72 bp | ACCCTCTGCTTCTGGCCTCCATATAGACAGATGCACTaGACTGCTGCATGGTGCATTCCATCTCAATCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: TLCFWPPYRQMH*TAAWCIPSQSA Trigger: AGCTGATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCAGAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR GCA 72 bp | ACACCACCCTCTGCTTCTGGCCTCCATATAGACAGATaGACTGCACTGCTGCATGGTGCATTCCATCTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: TPPSASGLHIDR*TALLHGAFHLN Trigger: ATTGAGATGGAATGCACCATGCAGCAGTGCAGTGCATCTGTCTATATGGAGGCCAGAAGCAGAGGGTGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CCA 72 bp | CATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTaGAAACGCACAGGAAATGACATCGCCAAAGCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HVRGSIRGALSY*KRTGNDIAKAA Trigger: AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CCA 72 bp | TGGTGCATTCCATCTCAATCAGCTGGCGGCATCCAATaGTTAATCTTTCCCGGTACTCAGTCTGAGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: WCIPSQSAGGIQ*LIFPGTQSEKH Trigger: GTGTTTCTCAGACTGAGTACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR CAA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAACTTAAGTCTTGGGGTTaGGCAGTGTCTGGTCATGTG | + |
|
Preference number: 3 (lower is better) Translates to: KRTGNDIAKAATEKVLVQLKSWG*AVSGHV Trigger: CACATGACCAGACACTGCCAAACCCCAAGACTTAAG...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CCA 72 bp | GTCACAGTGATTCCTGCCTCAGGAACACTGAGAAGATaGCTCTCTCTCTTCTCCTTAGAGGTAGGAAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: VTVIPASGTLRR*LSLFSLEVGSI Trigger: AATACTTCCTACCTCTAAGGAGAAGAGAGAGAGCCATCTTCTCAGTGTTCCTGAGGCAGGAATCACTGTGAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CCA 72 bp | ATGTGGTGGCATGGTCATGTCTTAAGTCTTGGGGTTTaGCAGTGTCTGGTCATGTGTTCACATTCAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: MWWHGHVLSLGV*QCLVMCSHSGL Trigger: TAACCCTGAATGTGAACACATGACCAGACACTGCCAAACCCCAAGACTTAAGACATGACCATGCCACCACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCTCGAAGTTGTCAGGGTaGAACTTGAGTCCAGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFSKLSG*NLSPVF Trigger: AAACACTGGACTCAAGTTCAACCCTGACAACTTCGA...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR-3UTR CAA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCAGGAGCCAAAATCCTTaGAATTCCTTCAAGAATATC | + |
|
Preference number: 3 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFRSQNP*NSFKNI Trigger: GATATTCTTGAAGGAATTCAAAGGATTTTGGCTCCT...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CCA 72 bp | CTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTaGGGTACAGTTTATACTACACTAGATTCAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRGRKYCQLQKS*GTVYTTLDSMR Trigger: TCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | GAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACCGACACGTGCAGCGTaGAGCTCTTCTACTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLFPTGNAQEMTSPKQLPTRAA*SSSTIC Trigger: GCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGG...TAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAACACTCTCCAGGACAGACCAGATTTCCTGATGCCTGGTGGCCTGGGACAGTCTCAAGCTTGTaGGCACTGGTAGTACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSKHSPGQTRFPDAWWPGTVSSL*ALVVQS Trigger: GCTTTGTACTACCAGTGCTCACAAGCTTGAGACTGT...CCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTCAATCTCCATGCTCATaGGCTCTCCAGACGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RGALSYWKRTGNDIAKAAQSPCS*ALQTVE Trigger: TTCCACCGTCTGGAGAGCTCATGAGCATGGAGATTG...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | TGGTGCATTCCATCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTGAGAAGCTTCGTGTCTaGGGCAGTGTGTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WCIPSQSAGGIQWLIFPGEKLRV*GSVCSR Trigger: TCTGCTGCACACACTGCCTCAGACACGAAGCTTCTC...ACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAACACTCTCCAGGACAGACCAGATTTCCTGATGCCTGGTGGCCTGGGCTACTCGTTCCTTGGTaGTCACAATGGTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TSKHSPGQTRFPDAWWPGLLVPW*SQWSFL Trigger: AAGAAAGGACCATTGTGAGCACCAAGGAACGAGTAG...CCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | GAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAACAGATGCACTGCACTaGTGCATGGTGCATTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGLFPTGNAQEMTSPKQLTDALH*CMVHSI Trigger: GATGGAATGCACCATGCAGCAGTGCAGTGCATCTGT...TAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | AAATCCAGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTGGGCTGGCGGCATCCAATaGTTAATCTTTCCCGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSASHVRGSIRGALSYWAGGIQ*LIFPGT Trigger: AGTACCGGGAAAGATTAACCATTGGATGCCGCCAGC...CCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCTGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | GAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAACAGTCTCAAGCTTGTaGGCACTGGTAGTACAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLFPTGNAQEMTSPKQLTVSSL*ALVVQS Trigger: GCTTTGTACTACCAGTGCTCACAAGCTTGAGACTGT...TAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | ACATCCAAACACTCTCCAGGACAGACCAGATTTCCTGATGCCTGGTGGCCTGGGTTTAATGACATCTGGTaGCTTTGCAAGTGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TSKHSPGQTRFPDAWWPGFNDIW*LCKCCF Trigger: GAAGCAACACTTGCAAAGTCACCAGATGTCATTAAA...CCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | ACATCCAAACACTCTCCAGGACAGACCAGATTTCCTGATGCCTGGTGGCCTGGGGAGTTTTCAGTTTTGTaGCTGGCCAGATTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: TSKHSPGQTRFPDAWWPGEFSVL*LARFND Trigger: GTCATTAAATCTGGCCAGGCACAAAACTGAAAACTC...CCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGGTGGCCTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTTGGTTGGACAGTCCGGAATTTaGAGCTCCTTCCTTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MPGGLGKIRIQENVDILVGQSGI*SSFLRS Trigger: ACTCCTAAGGAAGGAGCTGCAAATTCCGGACTGTCC...AACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAGGCCACCAGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR CCA 90 bp | AAATCCAGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTGGTCCATCTCAATCAGCTaGCGGCATCCAATGGTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSSASHVRGSIRGALSYWSISIS*RHPMVN Trigger: ATTAACCATTGGATGCCGCCAGCTGATTGAGATGGA...CCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCTGGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGACCACCCTCTGCTTCTaGCCTCCATATAGACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LSYWKRTGNDIAKAATEKTTLCF*PPYRQM Trigger: CATCTGTCTATATGGAGGCCAGAAGCAGAGGGTGGT...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTTGTTGCTTCTCCTCCTaGTTACTCTTTGACTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: RGALSYWKRTGNDIAKAACCFSS*LLFDLL Trigger: TAGCAAGTCAAAGAGTAAGCAGGAGGAGAAGCAACA...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAAGGACAGTCCGGAATTTaGAGCTCCTTCCTTAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KRTGNDIAKAATEKVLVQGQSGI*SSFLRS Trigger: ACTCCTAAGGAAGGAGCTGCAAATTCCGGACTGTCC...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | AAATCCAGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTGGACTAGTAGAACCTGCTaGGATTTCTCCCTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KSSASHVRGSIRGALSYWTSRTC*DFSLFL Trigger: AAGAAAAAGGGAGAAATCTCAGCAGGTTCTACTAGT...CCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCTGGATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTAAGTCTTGGGGTTTGGCAGTGTCTGGTCATGTGTTCACATTCAGGGTTTTCTCTTCTTGGTTaGAACAGGCTGAACGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: HVLSLGVWQCLVMCSHSGFSLLG*NRLNAM Trigger: CATGGCGTTCAGCCTGTTTCAACCAAGAAGAGAAAA...CCCTGAATGTGAACACATGACCAGACACTGCCAAACCCCAAGACTTAAGACATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGAAGAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTGAGAAGCTTCGTGTCTaGGGCAGTGTGTGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TPEELGYSLYYTRFNEIGEKLRV*GSVCSR Trigger: TCTGCTGCACACACTGCCTCAGACACGAAGCTTCTC...ACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGCCAGATCTTCTTTACTaGGGGACTTCACACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LFSLEVGSIVNSRRAGVQPDLLY*GTSHHL Trigger: TAAGTGGTGTGAAGTCCCTCAGTAAAGAAGATCTGG...CTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGGTGGCCTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTTGGTTCCAGATCTTCTTTACTaGGGGACTTCACACCACTTA | + |
|
Preference number: 4 (lower is better) Translates to: MPGGLGKIRIQENVDILVPDLLY*GTSHHL Trigger: TAAGTGGTGTGAAGTCCCTCAGTAAAGAAGATCTGG...AACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAGGCCACCAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | TCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTACTCAGTCTGAGACTCCTTGTGCTTTCTaGAGAACTTGGCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQSAGGIQWLIFPGTQSETPCAF*RTWLQF Trigger: AAACTGAAGCCAAGTTCTTCAGAAAGCACAAGGAGT...CTCAGACTGAGTACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTTTGACATCTTGGTTATaGAGCTTCACCAAAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGALSYWKRTGNDIAKAALTSWL*SFTKEV Trigger: CACTTCTTTGGTGAAGCTTCATAACCAAGATGTCAA...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | AAATCCAGCGCTTCACATGTAAGGGGAAGCATCAGAGGGGCTCTTTCCTACTGGAATCCAGGAAAACGTTaGCATCTTGGTTATGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSASHVRGSIRGALSYWNPGKR*HLGYEA Trigger: AGCTTCATAACCAAGATGTCAACGTTTTCCTGGATT...CCAGTAGGAAAGAGCCCCTCTGATGCTTCCCCTTACATGTGAAGCGCTGGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAAAGAAGTGTCTTCCTaGTCTTTACTCCTTGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RGALSYWKRTGNDIAKAAKEVSS*SLLLVL Trigger: AAGCACAAGGAGTAAAGAGCAGGAAGACACTTCTTT...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTATAGACAGATGCACTaGACTGCTGCATGGTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLEVGSIVNSRRAGVQYRQMH*TAAWCI Trigger: AATGCACCATGCAGCAGTGCAGTGCATCTGTCTATA...CTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATCTTCACACCACCCTCTaGTTCTGGCCTCCATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYLHTTL*FWPPYR Trigger: TCTATATGGAGGCCAGAAGCAGAGGGTGGTGTGAAG...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCACAATCTCCATGCTCATaGGCTCTCCAGACGGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPQSPCS*ALQTVE Trigger: TTCCACCGTCTGGAGAGCTCATGAGCATGGAGATTG...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAACACAGCTTTCTGTCTTaGCTTTTGAGGCTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTGNDIAKAATEKVLVQHSFLS*LLRLLL Trigger: CAACAACAGCCTCAAAAGTCAAGACAGAAAGCTGTG...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | CATGTCTTAAGTCTTGGGGTTTGGCAGTGTCTGGTCATGTGTTCACATTCAGGGAGTAGTTTGTTTACTTaGGCAAAGGTCTGGGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HVLSLGVWQCLVMCSHSGSSLFT*AKVWGR Trigger: TCTTCCCCAGACCTTTGCTCAAGTAAACAAACTACT...CCCTGAATGTGAACACATGACCAGACACTGCCAAACCCCAAGACTTAAGACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAACTACTCGTTCCTTGGTaGTCACAATGGTCCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTGNDIAKAATEKVLVQLLVPW*SQWSFL Trigger: AAGAAAGGACCATTGTGAGCACCAAGGAACGAGTAG...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGGCTCTTTACTCCTTGTaGTTTCTGAAGAACTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLEVGSIVNSRRAGVQALYSL*FLKNLA Trigger: AGCCAAGTTCTTCAGAAAGCACAAGGAGTAAAGAGC...CTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATCACTGCACTGCTGCATaGTGCATTCCATCTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYHCTAA*CIPSQS Trigger: TGATTGAGATGGAATGCACCATGCAGCAGTGCAGTG...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGTTTAATGACATCTGGTaGCTTTGCAAGTGTTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSYWKRTGNDIAKAATEKFNDIW*LCKCCF Trigger: GAAGCAACACTTGCAAAGTCACCAGATGTCATTAAA...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGAGCTCTTCTACTATCTaGATCTCTTCATCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSLEVGSIVNSRRAGVQSSSTI*ISSSAS Trigger: AGATGCAGATGAAGAGATGCAGATAGTAGAAGAGCT...CTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGAAGAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTGATGCACTGCACTGCTaGATGGTGCATTCCATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPEELGYSLYYTRFNEIGDALHC*MVHSIS Trigger: TGAGATGGAATGCACCATGCAGCAGTGCAGTGCATC...ACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGGTGTTTCAAAACTCTaGGCATGGTTTTCCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSYWKRTGNDIAKAATEKGVSKL*AWFSLE Trigger: TTCTAAGGAAAACCATGCCCAGAGTTTTGAAACACC...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CAA 72 bp | GGTGGGTTTTCCCACCAGTTTTATATAAATGACAGTTaGTTCATGAAAGCAGCCCATGTGGAATGTGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GGFSHQFYINDS*FMKAAHVECGG Trigger: GCCACCACATTCCACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAACCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | GTCACTTATGAAGACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTTTTTCTCTTCTTGGTTaGAACAGGCTGAACGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VTYEDRDAVPAVNLRPVVFSLLG*NRLNAM Trigger: CATGGCGTTCAGCCTGTTTCAACCAAGAAGAGAAAA...AACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTCTTCATAAGTGAC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AGTGATTCCTGCCTCAGGAACACTGAGAAGATGGCTCTCTCTCTTCTCCTTAGAGCCACCATTAACTTTTaGAGATACACAAAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SDSCLRNTEKMALSLLLRATINF*RYTKAS Trigger: AGAAGCTTTTGTGTATCTTCAAAAGTTAATGGTGGC...TCTAAGGAGAAGAGAGAGAGCCATCTTCTCAGTGTTCCTGAGGCAGGAATCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | TGGTGCATTCCATCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTGTTGATAAAATGAATTaGAGGTACAGCTTTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCIPSQSAGGIQWLIFPGVDKMN*RYSFML Trigger: CAGCATAAAGCTGTACCTGCAATTCATTTTATCAAC...ACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGAGCTTCTTCAAAGGATaGTATTTTCGAAGTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSYWKRTGNDIAKAATEKSFFKG*YFRSCQ Trigger: CTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCT...CTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | ACTCCAGAAGAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTTGCACTGCTGCATGGTaGATTCCATCTCAATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPEELGYSLYYTRFNEIGCTAAW*IPSQSA Trigger: AGCTGATTGAGATGGAATGCACCATGCAGCAGTGCA...ACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | GACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTGAGCATGTCTTCGGTGTTTCAAAACTCTaGGCATGGTTTTCCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DRDAVPAVNLRPVVEHVFGVSKL*AWFSLE Trigger: TTCTAAGGAAAACCATGCCCAGAGTTTTGAAACACC...GAAGACATGCTCAACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CAA 72 bp | CTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTaGGTTATGAAGCTTCACCAAAGAAGTGTCTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKIRIQENVDI*VMKLHQRSVFL Trigger: CAGGAAGACACTTCTTTGGTGAAGCTTCATAACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCACACAGCTTTCTGTCTTaGCTTTTGAGGCTGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPHSFLS*LLRLLL Trigger: CAACAACAGCCTCAAAAGTCAAGACAGAAAGCTGTG...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATGAGTTTTCAGTTTTGTaGCTGGCCAGATTTAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYEFSVL*LARFND Trigger: GTCATTAAATCTGGCCAGGCACAAAACTGAAAACTC...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCACTGCATCTCTTCATCTaGATCTTGGGTATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPLHLFI*ILGILR Trigger: TCTGAGGATACCCAAGATGCAGATGAAGAGATGCAG...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR GCA 90 bp | CATGTCTTAAGTCTTGGGGTTTGGCAGTGTCTGGTCATGTGTTCACATTCAGGGGTTGATAAAATGAATTaGAGGTACAGCTTTATGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HVLSLGVWQCLVMCSHSGVDKMN*RYSFML Trigger: CAGCATAAAGCTGTACCTGCAATTCATTTTATCAAC...CCCTGAATGTGAACACATGACCAGACACTGCCAAACCCCAAGACTTAAGACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | GTCACTTATGAAGACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTACTAGTAGAACCTGCTaGGATTTCTCCCTTTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTYEDRDAVPAVNLRPVVTSRTC*DFSLFL Trigger: AAGAAAAAGGGAGAAATCTCAGCAGGTTCTACTAGT...AACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTCTTCATAAGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCATGTGGCTTCAGTTTTGTCTTaGCCTCTGCGAGTACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FSHQFYINDSLFMKAAHVASVLS*PLRVLA Trigger: TGCAAGTACTCGCAGAGGTCAAGACAAAACTGAAGC...CACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | GGTGGGTTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCACTCCTTGTGCTTTCTaGAGAACTTGGCTTCAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GGFSHQFYINDSLFMKAATPCAF*RTWLQF Trigger: AAACTGAAGCCAAGTTCTTCAGAAAGCACAAGGAGT...GGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAACCCACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATGGAGCCAAAATCCTTTaGATTCCTTCAAGAATATCT | + |
|
Preference number: 4 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYGAKIL*IPSRIS Trigger: AGATATTCTTGAAGGAATTCAAAGGATTTTGGCTCC...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCATGTTGCTTCTCCTCCTaGTTACTCTTTGACTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPCCFSS*LLFDLL Trigger: TAGCAAGTCAAAGAGTAAGCAGGAGGAGAAGCAACA...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCATGTGTTGGTTGAAACAGGCTaGACGCCATGTTCTGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: FSHQFYINDSLFMKAAHVLVETG*TPCSEL Trigger: TAGTTCAGAACATGGCGTTCAGCCTGTTTCAACCAA...CACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | TTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCATGTGCTGCATCTCTTCATCTaGATCTTGGGTATCCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSHQFYINDSLFMKAAHVLHLFI*ILGILR Trigger: TCTGAGGATACCCAAGATGCAGATGAAGAGATGCAG...CACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCAAGCTCTTCTACTATCTaGATCTCTTCATCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPSSSTI*ISSSAS Trigger: AGATGCAGATGAAGAGATGCAGATAGTAGAAGAGCT...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATTTCTTTTCCTTTGTCTaGTCTACAGGTTTAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYFFSFV*STGLDF Trigger: GAAATCTAAACCTGTAGACCAGACAAAGGAAAAGAA...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| 3UTR CAA 72 bp | CAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTaGAGTCCAGTGTTTGAAATACATCTGTGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QRMLFSKLSGLN*SPVFEIHLCCS Trigger: AGAACAGCACAGATGTATTTCAAACACTGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| 3UTR CAA 72 bp | CTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTaGAACTTGAGTCCAGTGTTTGAAATACATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LLQRMLFSKLSG*NLSPVFEIHLC Trigger: GCACAGATGTATTTCAAACACTGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | AAGCTTCTTCAAAGGATGCTATTTTCGAAGTTGTCAGGGTTGAACTTGAGTCCATCTTTCATCTTCTTCTaGATAAGCAAAGAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLLQRMLFSKLSGLNLSPSFIFF*ISKEGQ Trigger: TTGGCCTTCTTTGCTTATTCAGAAGAAGATGAAAGA...TGGACTCAAGTTCAACCCTGACAACTTCGAAAATAGCATCCTTTGAAGAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTCAATACAACAACTCCATCATAATTTaGCCTTGTACTGAAGGCATG | + |
|
Preference number: 4 (lower is better) Translates to: ELGYSLYYTRFNEIGQYNNSIII*PCTEGM Trigger: CATGCCTTCAGTACAAGGTCAAATTATGATGGAGTT...GTTGTATTGACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CCA 90 bp | GTCACTTATGAAGACAGAGATGCTGTTCCTGCTGTAAACTTAAGGCCTGTTGTTTTCTTTTCCTTTGTCTaGTCTACAGGTTTAGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTYEDRDAVPAVNLRPVVFFSFV*STGLDF Trigger: GAAATCTAAACCTGTAGACCAGACAAAGGAAAAGAA...AACAACAGGCCTTAAGTTTACAGCAGGAACAGCATCTCTGTCTTCATAAGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR TCA 90 bp | GAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTCAATACAACACATCTGTGCTGTTCTaGTATATTGACATCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ELGYSLYYTRFNEIGQYNTSVLF*YIDIQT Trigger: TGTTTGGATGTCAATATATCAGAACAGCACAGATGT...GTTGTATTGACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR GCA 90 bp | GAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTCAATACAACCTCTCACAAACAGACTaGTTATGTGTAGAATCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ELGYSLYYTRFNEIGQYNLSQTD*LCVESE Trigger: TTCAGATTCTACACATAAGCAGTCTGTTTGTGAGAG...GTTGTATTGACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR TCA 90 bp | TTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCATGTGTCTTTCATCTTCTTCTaGATAAGCAAAGAAGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSHQFYINDSLFMKAAHVSFIFF*ISKEGQ Trigger: TTGGCCTTCTTTGCTTATTCAGAAGAAGATGAAAGA...CACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS GCA 90 bp | TCCAGACGGTGGAACCACAGGCAGATCCACGCTTCTCCCGACACGTaGAGCGTGGAGCTCTTCTACTATCTGCATCTCTTCATCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SRRWNHRQIHASPDT*SVELFYYLHLFICI Trigger: GATGCAGATGAAGAGATGCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGGGAGAAGCGTGGATCTGCCTGTGGTTCCACCGTCTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS CCA 90 bp | GGTGGAACCACAGGCAGATCCACGCTTCTCCCGACACGTGCAGCGTaGAGCTCTTCTACTATCTGCATCTCTTCATCTGCATCTTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GGTTGRSTLLPTRAA*SSSTICISSSASWV Trigger: TACCCAAGATGCAGATGAAGAGATGCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGGGAGAAGCGTGGATCTGCCTGTGGTTCCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS-3UTR CAA 90 bp | ACATCCAAACACTCTCCAGGACAGACCAGATTTCCTGATGCCTGGTGGCCTGGGGTTTTCTCTTCTTGGTaGAAACAGGCTGAACGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSKHSPGQTRFPDAWWPGVFSSW*KQAERH Trigger: ATGGCGTTCAGCCTGTTTCAACCAAGAAGAGAAAAC...CCCAGGCCACCAGGCATCAGGAAATCTGGTCTGTCCTGGAGAGTGTTTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS TCA 90 bp | ATTCATGAGAACATTTGTGTCCATAACAATGAGAAGCTTCGTGTCTaGGGCAGTGTGTGCAGCAGAGGGATGTGCGTCCTCATCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IHENICVHNNEKLRV*GSVCSRGMCVLIHQ Trigger: CTGGTGGATGAGGACGCACATCCCTCTGCTGCACACACTGCCTCAGACACGAAGCTTCTCATTGTTATGGACACAAATGTTCTCATGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS CCA 90 bp | CAGTCCGGAATTTGCAGCTCCTTCCTTAGGAGTCTCTTTCGCAGGTaGTACTTCTGCGTTCAACTGCTGCTTAGAAATACAAGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QSGICSSFLRSLFRR*YFCVQLLLRNTRLM Trigger: CATCAGCCTTGTATTTCTAAGCAGCAGTTGAACGCAGAAGTACCACCTGCGAAAGAGACTCCTAAGGAAGGAGCTGCAAATTCCGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000141977.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAGTTTTCTCTTCTTGGTaGAAACAGGCTGAACGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: EGLFPTGNAQEMTSPKQLVFSSW*KQAERH Trigger: ATGGCGTTCAGCCTGTTTCAACCAAGAAGAGAAAAC...TAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | TCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTACTCAGTCTGAGGTGACTTTGCAAGTGTaGCTTCTCCTCCTGCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: SQSAGGIQWLIFPGTQSEVTLQV*LLLLLT Trigger: AGTAAGCAGGAGGAGAAGCAACACTTGCAAAGTCAC...CTCAGACTGAGTACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | ATGCCTGGTGGCCTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTTGGTTCCACAGCTTTCTGTCTaGACTTTTGAGGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MPGGLGKIRIQENVDILVPQLSV*TFEAVV Trigger: AACAACAGCCTCAAAAGTCAAGACAGAAAGCTGTGG...AACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAGGCCACCAGGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS GCA 90 bp | ATTTGCAGCTCCTTCCTTAGGAGTCTCTTTCGCAGGTGGTACTTCTaGGTTCAACTGCTGCTTAGAAATACAAGGCTGATGACACAAATC | + |
|
Preference number: 5 (lower is better) Translates to: ICSSFLRSLFRRWYF*VQLLLRNTRLMTQI Trigger: GATTTGTGTCATCAGCCTTGTATTTCTAAGCAGCAGTTGAACGCAGAAGTACCACCTGCGAAAGAGACTCCTAAGGAAGGAGCTGCAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000141977.3 |
||
| CDS CCA 90 bp | TGGGTATCCTCAGATGACACTGAAGAACATGGTGTTTCAAAACTCTaGGCATGGTTTTCCTTAGAATCGGAACTACTCGTTCCTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WVSSDDTEEHGVSKL*AWFSLESELLVPWC Trigger: GCACCAAGGAACGAGTAGTTCCGATTCTAAGGAAAACCATGCCCAGAGTTTTGAAACACCATGTTCTTCAGTGTCATCTGAGGATACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | AAACGCACAGGAAATGACATCGCCAAAGCAGCTACAGAGAAGGTGCTAGTTCAACCTGCTCTTTACTCCTaGTGCTTTCTGAAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KRTGNDIAKAATEKVLVQPALYS*CFLKNL Trigger: CAAGTTCTTCAGAAAGCACAAGGAGTAAAGAGCAGG...TTGAACTAGCACCTTCTCTGTAGCTGCTTTGGCGATGTCATTTCCTGTGCGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | AGAGGGGCTCTTTCCTACTGGAAACGCACAGGAAATGACATCGCCAAAGCAGCTAGGAGCCAAAATCCTTaGAATTCCTTCAAGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: RGALSYWKRTGNDIAKAARSQNP*NSFKNI Trigger: GATATTCTTGAAGGAATTCAAAGGATTTTGGCTCCT...AGCTGCTTTGGCGATGTCATTTCCTGTGCGTTTCCAGTAGGAAAGAGCCCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | AGTGATTCCTGCCTCAGGAACACTGAGAAGATGGCTCTCTCTCTTCTCCTTAGATCCCGGGCAGTGAATTaGACATTTTTGTTTACCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SDSCLRNTEKMALSLLLRSRAVN*TFLFTS Trigger: TGAGGTAAACAAAAATGTCAAATTCACTGCCCGGGA...TCTAAGGAGAAGAGAGAGAGCCATCTTCTCAGTGTTCCTGAGGCAGGAATCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | TGGTGCATTCCATCTCAATCAGCTGGCGGCATCCAATGGTTAATCTTTCCCGGTGGCTTCAGTTTTGTCTaGACCTTTACAGAGATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: WCIPSQSAGGIQWLIFPGGFSFV*TFTEIF Trigger: GAAAATCTCTGTAAAGGTCAAGACAAAACTGAAGCC...ACCGGGAAAGATTAACCATTGGATGCCGCCAGCTGATTGAGATGGAATGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111883.9 |
||
| CDS TCA 90 bp | GCCTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTTGGTTATaGAGCTTCACCAAAGAAGTGTCTTCCTGCTCTTTACTCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWGRLESRKTLTSWL*SFTKEVSSCSLLLV Trigger: CACAAGGAGTAAAGAGCAGGAAGACACTTCTTTGGTGAAGCTTCATAACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS CCA 90 bp | TCCTCAGATGACACTGAAGAACATGGTGTTTCAAAACTCTGGGCATaGTTTTCCTTAGAATCGGAACTACTCGTTCCTTGGTGCTCACAA | + |
|
Preference number: 5 (lower is better) Translates to: SSDDTEEHGVSKLWA*FSLESELLVPWCSQ Trigger: TTGTGAGCACCAAGGAACGAGTAGTTCCGATTCTAAGGAAAACCATGCCCAGAGTTTTGAAACACCATGTTCTTCAGTGTCATCTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | CTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGTTTATTCGAAGTTGTCAGGGTaGAACTTGAGTCCAGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LLRGRKYCQLQKSWGTVYSKLSG*NLSPVF Trigger: AAACACTGGACTCAAGTTCAACCCTGACAACTTCGA...ATAAACTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | AGTGATTCCTGCCTCAGGAACACTGAGAAGATGGCTCTCTCTCTTCTCCTTAGAGAGAGTCTCAACATCTaGGTAATTACTATTAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SDSCLRNTEKMALSLLLRESLNI*VITIRS Trigger: GCTCCTAATAGTAATTACCAAGATGTTGAGACTCTC...TCTAAGGAGAAGAGAGAGAGCCATCTTCTCAGTGTTCCTGAGGCAGGAATCACT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS TCA 90 bp | TCTGTATCATCTGCTTTCAGTTTTCTCTTCTTGGTTGAAACAGGCTaGACGCCATGTTCTGAACTAGTAGAACCTGCTGAGATTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SVSSAFSFLFLVETG*TPCSELVEPAEISP Trigger: GGGAGAAATCTCAGCAGGTTCTACTAGTTCAGAACATGGCGTTCAGCCTGTTTCAACCAAGAAGAGAAAACTGAAAGCAGATGATACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS TCA 90 bp | TCCGTGCACAGAATAACAAGAGAACACGGGAATAATTGCTGGTACTaGAGACAGCACTTTAATACTCGGTCATCATTGTTCTCGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: SVHRITREHGNNCWY*RQHFNTRSSLFSSL Trigger: GAGTGACGAGAACAATGATGACCGAGTATTAAAGTGCTGTCTTCAGTACCAGCAATTATTCCCGTGTTCTCTTGTTATTCTGTGCACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTCCTTAGAGGTAGGAAGTATTGTCAACTCCAGAAGAGCTGGGGTACAGAATGAGTTTTCAGTTTaGTGCCTGGCCAGATTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LFSLEVGSIVNSRRAGVQNEFSV*CLARFN Trigger: ATTAAATCTGGCCAGGCACAAAACTGAAAACTCATT...CTGTACCCCAGCTCTTCTGGAGTTGACAATACTTCCTACCTCTAAGGAGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTCAATACAACGGCTTCAGTTTTGTCTaGACCTCTGCGAGTACTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELGYSLYYTRFNEIGQYNGFSFV*TSASTC Trigger: GCAAGTACTCGCAGAGGTCAAGACAAAACTGAAGCC...GTTGTATTGACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS TCA 90 bp | AATGAGTTTTCAGTTTTGTGCCTGGCCAGATTTAATGACATCTGGTaGCTTTGCAAGTGTTGCTTCTCCTCCTGCTTACTCTTTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NEFSVLCLARFNDIW*LCKCCFSSCLLFDL Trigger: CAAGTCAAAGAGTAAGCAGGAGGAGAAGCAACACTTGCAAAGTCACCAGATGTCATTAAATCTGGCCAGGCACAAAACTGAAAACTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | GGTGGGTTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCCACAGCTTTCTGTCTaGACTTTTGAGGCTGTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GGFSHQFYINDSLFMKAAPQLSV*TFEAVV Trigger: AACAACAGCCTCAAAAGTCAAGACAGAAAGCTGTGG...GGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAACCCACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS-3UTR CAA 90 bp | TTTTCCCACCAGTTTTATATAAATGACAGTTTGTTCATGAAAGCAGCCCATGTGGTGACTTTGCAAGTGTaGCTTCTCCTCCTGCTTACT | + |
|
Preference number: 5 (lower is better) Translates to: FSHQFYINDSLFMKAAHVVTLQV*LLLLLT Trigger: AGTAAGCAGGAGGAGAAGCAACACTTGCAAAGTCAC...CACATGGGCTGCTTTCATGAACAAACTGTCATTTATATAAAACTGGTGGGAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS TCA 90 bp | CATCTGGTGACTTTGCAAGTGTTGCTTCTCCTCCTGCTTACTCTTTaGCTTGCTAGAATCTATAGTAAAGATCTTTTCTTCGACAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: HLVTLQVLLLLLLTL*LARIYSKDLFFDKL Trigger: AAGCTTGTCGAAGAAAAGATCTTTACTATAGATTCTAGCAAGTCAAAGAGTAAGCAGGAGGAGAAGCAACACTTGCAAAGTCACCAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS-3UTR CAA 90 bp | ACTCCAGAAGAGCTGGGGTACAGTTTATACTACACTAGATTCAATGAGATTGGTTGCTGTTCTGATATATaGACATCCAAACACTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPEELGYSLYYTRFNEIGCCSDI*TSKHSP Trigger: TGGAGAGTGTTTGGATGTCAATATATCAGAACAGCA...ACCAATCTCATTGAATCTAGTGTAGTATAAACTGTACCCCAGCTCTTCTGGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS GCA 72 bp | TGGAACCACAGGCAGATCCACGCTTCTCCCGACACGTaGAGCGTGGAGCTCTTCTACTATCTGCATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: WNHRQIHASPDT*SVELFYYLHLF Trigger: GAAGAGATGCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGGGAGAAGCGTGGATCTGCCTGTGGTTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS CCA 72 bp | ACAGGCAGATCCACGCTTCTCCCGACACGTGCAGCGTaGAGCTCTTCTACTATCTGCATCTCTTCATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TGRSTLLPTRAA*SSSTICISSSA Trigger: TGCAGATGAAGAGATGCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGGGAGAAGCGTGGATCTGCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS GCA 72 bp | CTCCCGACACGTGCAGCGTGGAGCTCTTCTACTATCTaGATCTCTTCATCTGCATCTTGGGTATCCTCAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LPTRAAWSSSTI*ISSSASWVSSD Trigger: ATCTGAGGATACCCAAGATGCAGATGAAGAGATGCAGATAGTAGAAGAGCTCCACGCTGCACGTGTCGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS TCA 72 bp | AACATTTGTGTCCATAACAATGAGAAGCTTCGTGTCTaGGGCAGTGTGTGCAGCAGAGGGATGTGCGTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: NICVHNNEKLRV*GSVCSRGMCVL Trigger: GAGGACGCACATCCCTCTGCTGCACACACTGCCTCAGACACGAAGCTTCTCATTGTTATGGACACAAATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS GCA 72 bp | TCCTTCCTTAGGAGTCTCTTTCGCAGGTGGTACTTCTaGGTTCAACTGCTGCTTAGAAATACAAGGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: SFLRSLFRRWYF*VQLLLRNTRLM Trigger: CATCAGCCTTGTATTTCTAAGCAGCAGTTGAACGCAGAAGTACCACCTGCGAAAGAGACTCCTAAGGAAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000141977.3 |
||
| CDS CAA 90 bp | CCTGGTGGCCTGGGGAAGATTAGAATCCAGGAAAACGTTGACATCTaGGTTATGAAGCTTCACCAAAGAAGTGTCTTCCTGCTCTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: PGGLGKIRIQENVDI*VMKLHQRSVFLLFT Trigger: AGTAAAGAGCAGGAAGACACTTCTTTGGTGAAGCTTCATAACCAAGATGTCAACGTTTTCCTGGATTCTAATCTTCCCCAGGCCACCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS CAA 72 bp | GGCATGGTTTTCCTTAGAATCGGAACTACTCGTTCCTaGGTGCTCACAATGGTCCTTTCTTATCCTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: GMVFLRIGTTRS*VLTMVLSYPLT Trigger: TGTGAGAGGATAAGAAAGGACCATTGTGAGCACCAAGGAACGAGTAGTTCCGATTCTAAGGAAAACCATGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS CCA 72 bp | TTAGAATCGGAACTACTCGTTCCTTGGTGCTCACAATaGTCCTTTCTTATCCTCTCACAAACAGACTGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: LESELLVPWCSQ*SFLILSQTDCL Trigger: TAAGCAGTCTGTTTGTGAGAGGATAAGAAAGGACCATTGTGAGCACCAAGGAACGAGTAGTTCCGATTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS CCA 72 bp | AGCTCTTCTACTATCTGCATCTCTTCATCTGCATCTTaGGTATCCTCAGATGACACTGAAGAACATGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SSSTICISSSAS*VSSDDTEEHGV Trigger: AACACCATGTTCTTCAGTGTCATCTGAGGATACCCAAGATGCAGATGAAGAGATGCAGATAGTAGAAGAGCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 ENSMUST00000129939.2 |
||
| CDS CAA 72 bp | CTTGTGCTTTCTGAAGAACTTGGCTTCAGTTTTGTCTaGACCTCTGCGAGTACTTGCAGTAGTTTGTTTACT | + |
|
Preference number: 6 (lower is better) Translates to: LVLSEELGFSFV*TSASTCSSLFT Trigger: AGTAAACAAACTACTGCAAGTACTCGCAGAGGTCAAGACAAAACTGAAGCCAAGTTCTTCAGAAAGCACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS TCA 72 bp | TTGTGCTTTCTGAAGAACTTGGCTTCAGTTTTGTCTTaGCCTCTGCGAGTACTTGCAGTAGTTTGTTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: LCFLKNLASVLS*PLRVLAVVCLL Trigger: AAGTAAACAAACTACTGCAAGTACTCGCAGAGGTCAAGACAAAACTGAAGCCAAGTTCTTCAGAAAGCACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||
| CDS TCA 72 bp | AGAATAACAAGAGAACACGGGAATAATTGCTGGTACTaGAGACAGCACTTTAATACTCGGTCATCATTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RITREHGNNCWY*RQHFNTRSSLF Trigger: GAACAATGATGACCGAGTATTAAAGTGCTGTCTTCAGTACCAGCAATTATTCCCGTGTTCTCTTGTTATTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064771.12 ENSMUST00000111883.9 |
||
| CDS TCA 72 bp | CTTGTACTGAAGGCATGTAACAAACTTTTAGAATCCTaGAGCAAGAATTTCACTGTTGTAAAATCCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LVLKACNKLLES*SKNFTVVKSTA Trigger: GGCAGTGGATTTTACAACAGTGAAATTCTTGCTTCAGGATTCTAAAAGTTTGTTACATGCCTTCAGTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064771.12 |
||