Pregenerated sensors for SWAP70 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031015Ensembl transcript IDs: ENSMUST00000033325.9
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTTCCTGCTCTGAGGCAAGGCTGGACCAGGCCCGTGGGGGTCCCTaGTCTCTACTGAGTCCCACCTCTTCTGTGCCACATGGGTCACCT | + |
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Preference number: 1 (lower is better) Translates to: PSCSEARLDQARGGP*SLLSPTSSVPHGSP Trigger: AGGTGACCCATGTGGCACAGAAGAGGTGGGACTCAGTAGAGAGCAGGGACCCCCACGGGCCTGGTCCAGCCTTGCCTCAGAGCAGGAAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 90 bp | GCCTTCTGCACAGCCCATACAAAGGGAGCATGCAGTATTCAGGCTTaGGACCAGACAAGGAGGGCCGTGGCAGCTGCGGGCCATGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: AFCTAHTKGACSIQA*DQTRRAVAAAGHAS Trigger: AGAGGCATGGCCCGCAGCTGCCACGGCCCTCCTTGTCTGGTCTCAAGCCTGAATACTGCATGCTCCCTTTGTATGGGCTGTGCAGAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 90 bp | CTATCTGTAGACTTGCACATGTCTGGAATGGCCTCCTTCCTGCTCTaGGGCAAGGCTGGACCAGGCCCGTGGGGGTCCCTGCTCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: LSVDLHMSGMASFLL*GKAGPGPWGSLLST Trigger: AGTAGAGAGCAGGGACCCCCACGGGCCTGGTCCAGCCTTGCCTCAGAGCAGGAAGGAGGCCATTCCAGACATGTGCAAGTCTACAGATAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 90 bp | GAGACATCTCTAGAAGGTAAACATGGCGTCCTCAGCACAGGACCCTaGTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTT | + |
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Preference number: 1 (lower is better) Translates to: ETSLEGKHGVLSTGP*WSPEGRLRSSKANV Trigger: AACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTCCTGTGCTGAGGACGCCATGTTTACCTTCTAGAGATGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 90 bp | ACATCTCTAGAAGGTAAACATGGCGTCCTCAGCACAGGACCCTGCTaGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTT | + |
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Preference number: 1 (lower is better) Translates to: TSLEGKHGVLSTGPC*SPEGRLRSSKANVL Trigger: AAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTCCTGTGCTGAGGACGCCATGTTTACCTTCTAGAGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 90 bp | GAAACCACCTTGAGTATCAGGAGAGACCCACAAGTATCAGCGCATTaGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: ETTLSIRRDPQVSAH*PKGESHSSHLCGLL Trigger: GAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCCAATGCGCTGATACTTGTGGGTCTCTCCTGATACTCAAGGTGGTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 90 bp | GTATCAGCGCATTGGCCTAAAGGGGAGTCACACAGTTCACATCTGTaGGGTCTTCTCATCCACTGTCTACAAAGGACTTTCACTTCCCAG | + |
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Preference number: 1 (lower is better) Translates to: VSAHWPKGESHSSHL*GLLIHCLQRTFTSQ Trigger: CTGGGAAGTGAAAGTCCTTTGTAGACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCCAATGCGCTGATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 90 bp | AGAGACATAGTTCTAGTGAAAGCCACAAGGCTGGCCATCATCCTGTaGCACTTTACATCTTACCAGTCCACATTCTGTCAGCTTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: RDIVLVKATRLAIIL*HFTSYQSTFCQLPL Trigger: CAGTGGAAGCTGACAGAATGTGGACTGGTAAGATGTAAAGTGTCACAGGATGATGGCCAGCCTTGTGGCTTTCACTAGAACTATGTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 90 bp | ATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATaGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTT | + |
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Preference number: 1 (lower is better) Translates to: MGHLPVYNVKLLGCA*SYCWLQIPTSVVRL Trigger: AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 90 bp | CCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATGGAGTTACTGCTaGTTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCA | + |
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Preference number: 1 (lower is better) Translates to: PVYNVKLLGCAWSYC*LQIPTSVVRLTFQP Trigger: TGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATTATAAACAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 90 bp | CTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATGGAGTTACTaGTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAA | + |
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Preference number: 1 (lower is better) Translates to: LPVYNVKLLGCAWSY*WLQIPTSVVRLTFQ Trigger: TTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATTATAAACAGGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR GCA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGCTCAGCACAGGACCCTaGTGGAGCCCTGAGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ECAAGGEETADLPSKAGLLSTGP*WSPEGR Trigger: TCTCCCCTCAGGGCTCCAGCAGGGTCCTGTGCTGAG...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CAA 90 bp | CGCCTTCTGCACAGCCCATACAAAGGGAGCATGCAGTATTCAGGCTaGAGACCAGACAAGGAGGGCCGTGGCAGCTGCGGGCCATGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RLLHSPYKGSMQYSG*RPDKEGRGSCGPCL Trigger: GAGGCATGGCCCGCAGCTGCCACGGCCCTCCTTGTCTGGTCTCAAGCCTGAATACTGCATGCTCCCTTTGTATGGGCTGTGCAGAAGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR GCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTAATCGGCCAAGGGAATaGGCTGCCGGAGGGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: DPQALASVQTFHTGQYLLNRPRE*AAGGEE Trigger: CTCCTCCCCTCCGGCAGCGCATTCCCTTGGCCGATT...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCGCCTCCTTCCTGCTCTaGGGCAAGGCTGGACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: GLKGSHTVHICAVFSSTVASFLL*GKAGPG Trigger: GCCTGGTCCAGCCTTGCCTCAGAGCAGGAAGGAGGC...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTACACAGGGGAGACCCTaGTCCCCTTGGTCTGATTCC | + |
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Preference number: 2 (lower is better) Translates to: DPQALASVQTFHTGQYLLTQGRP*SPWSDS Trigger: GGAATCAGACCAAGGGGACCAGGGTCTCCCCTGTGT...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR GCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTGTCCCACCTCTTCTGTaGCACATGGGTCACCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: DPQALASVQTFHTGQYLLVPPLL*HMGHLP Trigger: AGGAAGGTGACCCATGTGGCACAGAAGAGGTGGGAC...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR CCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTAGACTTGCACATGTCTaGAATGGCCTCCTTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: DPQALASVQTFHTGQYLLRLAHV*NGLLPA Trigger: AGCAGGAAGGAGGCCATTCCAGACATGTGCAAGTCT...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR TCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTCTGGCCATCATCCTGTaGCACTTTACATCTTACCAG | + |
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Preference number: 2 (lower is better) Translates to: DPQALASVQTFHTGQYLLLAIIL*HFTSYQ Trigger: CTGGTAAGATGTAAAGTGTCACAGGATGATGGCCAG...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTGCTGAGACCAGGGGCTaGAAGGGCTGCAGAAGACAA | + |
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Preference number: 2 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSAETRG*KGCRRQ Trigger: TTGTCTTCTGCAGCCCTTGCAGCCCCTGGTCTCAGC...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR TCA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCCATCCACAAGGGCAGTaGCTAGTGACTTGTCCATCA | + |
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Preference number: 2 (lower is better) Translates to: GLKGSHTVHICAVFSSTVHPQGQ*LVTCPS Trigger: TGATGGACAAGTCACTAGTCACTGCCCTTGTGGATG...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR TCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCTGCAGAAGACAACAGTaGGGTGGCTCCAGCCACACC | + |
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Preference number: 2 (lower is better) Translates to: LQIPTSVVRLTFQPLISVCRRQQ*GGSSHT Trigger: GGTGTGGCTGGAGCCACCTCACTGTTGTCTTCTGCA...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTCAACAGACTAGCAGCTaGGGACAGAACACCCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLQQTSS*GQNTQR Trigger: TCTTTGGGTGTTCTGTCCCCAGCTGCTAGTCTGTTG...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR GCA 90 bp | GCAAATAATCTCATCTCTCGTTGGAGGAAAGGGCTGATTACAGTGAACACACAGGGCCAGGATAAGTCTTaGTTTGAGGTGAGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: ANNLISRWRKGLITVNTQGQDKS*FEVRRK Trigger: CTTTCTCCTCACCTCAAAGCAAGACTTATCCTGGCC...CTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 72 bp | GACTTGCACATGTCTGGAATGGCCTCCTTCCTGCTCTaGGGCAAGGCTGGACCAGGCCCGTGGGGGTCCCTG | + |
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Preference number: 3 (lower is better) Translates to: DLHMSGMASFLL*GKAGPGPWGSL Trigger: CAGGGACCCCCACGGGCCTGGTCCAGCCTTGCCTCAGAGCAGGAAGGAGGCCATTCCAGACATGTGCAAGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 72 bp | AAAGAGGCCAACAGACCAGGCAATCGGCCAAGGGAATaGGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: KEANRPGNRPRE*AAGGEETADLP Trigger: TGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTCCCTTGGCCGATTGCCTGGTCTGTTGGCCTCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | GAAGGTAAACATGGCGTCCTCAGCACAGGACCCTGCTaGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: EGKHGVLSTGPC*SPEGRLRSSKA Trigger: GGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTCCTGTGCTGAGGACGCCATGTTTACCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 72 bp | CATCAAGACACAGGGGAGACCCTGGTCCCCTTGGTCTaGTTCCCGGCTGCACTGACAAGGAAACATGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: HQDTGETLVPLV*FPAALTRKHGE Trigger: CTCACCATGTTTCCTTGTCAGTGCAGCCGGGAATCAGACCAAGGGGACCAGGGTCTCCCCTGTGTCTTGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 72 bp | CTTGTCCATCAGAGCACCAACAGCGGAGGCTTGCCATaGCACCTGACTCAAAGAGGCCAACAGACCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LVHQSTNSGGLP*HLTQRGQQTRQ Trigger: TTGCCTGGTCTGTTGGCCTCTTTGAGTCAGGTGTCATGGCAAGCCTCCGCTGTTGGTGCTCTGATGGACAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 72 bp | CTAGAAGGTAAACATGGCGTCCTCAGCACAGGACCCTaGTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: LEGKHGVLSTGP*WSPEGRLRSSK Trigger: TTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTCCTGTGCTGAGGACGCCATGTTTACCTTCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 72 bp | AAGCCGGTGAGGCAAGCAGAAACAAACACTACAGACTaGAGACGCCTTCTGCACAGCCCATACAAAGGGAGC | + |
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Preference number: 3 (lower is better) Translates to: KPVRQAETNTTD*RRLLHSPYKGS Trigger: GCTCCCTTTGTATGGGCTGTGCAGAAGGCGTCTGCAGTCTGTAGTGTTTGTTTCTGCTTGCCTCACCGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | TTGAGTATCAGGAGAGACCCACAAGTATCAGCGCATTaGCCTAAAGGGGAGTCACACAGTTCACATCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: LSIRRDPQVSAH*PKGESHSSHLC Trigger: GCACAGATGTGAACTGTGTGACTCCCCTTTAGGCCAATGCGCTGATACTTGTGGGTCTCTCCTGATACTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 72 bp | CATTGGCCTAAAGGGGAGTCACACAGTTCACATCTGTaGGGTCTTCTCATCCACTGTCTACAAAGGACTTTC | + |
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Preference number: 3 (lower is better) Translates to: HWPKGESHSSHL*GLLIHCLQRTF Trigger: GAAAGTCCTTTGTAGACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCCAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCTTGGTAAGACTTCCATaGGCAAATGTTTTCCAGTCA | + |
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Preference number: 3 (lower is better) Translates to: GLKGSHTVHICAVFSSTVLVRLP*ANVFQS Trigger: TGACTGGAAAACATTTGCCAATGGAAGTCTTACCAA...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 72 bp | GTTCTAGTGAAAGCCACAAGGCTGGCCATCATCCTGTaGCACTTTACATCTTACCAGTCCACATTCTGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VLVKATRLAIIL*HFTSYQSTFCQ Trigger: CTGACAGAATGTGGACTGGTAAGATGTAAAGTGTCACAGGATGATGGCCAGCCTTGTGGCTTTCACTAGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | AACTCTATCCAGTCCTTATGTAGATGCCAGGACTGCTaGGATCTATCTGTAGACTTGCACATGTCTGGAATG | + |
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Preference number: 3 (lower is better) Translates to: NSIQSLCRCQDC*DLSVDLHMSGM Trigger: CATTCCAGACATGTGCAAGTCTACAGATAGATCCCAGCAGTCCTGGCATCTACATAAGGACTGGATAGAGTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | AATGTAAAGCTTCTTGGCTGTGCATGGAGTTACTGCTaGTTACAGATTCCAACTAGTGTGGTAAGGCTTACT | + |
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Preference number: 3 (lower is better) Translates to: NVKLLGCAWSYC*LQIPTSVVRLT Trigger: AGTAAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR TCA 72 bp | CACCCAAGTTATCCACTAAGAAGGTTCGTGACACAGTaGTACTTTGCACACAAATCTAAACTGTATGAAGGC | + |
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Preference number: 3 (lower is better) Translates to: HPSYPLRRFVTQ*YFAHKSKLYEG Trigger: GCCTTCATACAGTTTAGATTTGTGTGCAAAGTATCACTGTGTCACGAACCTTCTTAGTGGATAACTTGGGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR GCA 72 bp | TATAATGTAAAGCTTCTTGGCTGTGCATGGAGTTACTaGTGGTTACAGATTCCAACTAGTGTGGTAAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: YNVKLLGCAWSY*WLQIPTSVVRL Trigger: AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | CTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATaGAGTTACTGCTGGTTACAGATTCCAACTAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: LPVYNVKLLGCA*SYCWLQIPTSV Trigger: CACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCCAAGAAGCTTTACATTATAAACAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CCA 72 bp | TCATTCATAATTCCTGCAAATAATCTCATCTCTCGTTaGAGGAAAGGGCTGATTACAGTGAACACACAGACA | + |
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Preference number: 3 (lower is better) Translates to: SFIIPANNLISR*RKGLITVNTQT Trigger: TGTCTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGCAGGAATTATGAATGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR TCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTCCAGGTCGAGCGCGGTaGAGGCGTGCCAAATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLPGRAR*RRAKWL Trigger: AAGCCATTTGGCACGCCTTCACCGCGCTCGACCTGG...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CCA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGTTTTCATTGGCGGCTTaGAGTTCCTTCATCTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ECAAGGEETADLPSKAGLFSLAA*SSFICR Trigger: GCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAA...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| 3UTR CAA 72 bp | CACAGCCCATACAAAGGGAGCATGCAGTATTCAGGCTaGAGACCAGACAAGGAGGGCCGTGGCAGCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: HSPYKGSMQYSG*RPDKEGRGSCG Trigger: CCCGCAGCTGCCACGGCCCTCCTTGTCTGGTCTCAAGCCTGAATACTGCATGCTCCCTTTGTATGGGCTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR TCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTCGAGCTCTGCCTGGGTaGACGCTGCGGGTCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSRALPG*TLRVPS Trigger: ACTGGGGACCCGCAGCGTTCACCCAGGCAGAGCTCG...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTAGCTCTTTCCGACGCTaGCGGGCTTCCTTGTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLSSFRR*RASLCG Trigger: ACCACACAAGGAAGCCCGCCAGCGTCGGAAAGAGCT...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR GCA 90 bp | GACCCTGCTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTTGCGCTCCAGCTCCTCCTaGTCGGCTAGCAGCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DPAGALRGDLEAAKPMFLRSSSS*SASSFL Trigger: AAGGAAGCTGCTAGCCGAGCAGGAGGAGCTGGAGCG...CAAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR GCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTTGCCGCACGAGAGGCTaGTTCCTCCAGTTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLCRTRG*FLQFLP Trigger: AGGAAGAAACTGGAGGAAGCAGCCTCTCGTGCGGCA...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTGACTTCTGGGCAACCTaGTCCTCCATCTGCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLDFWAT*SSICCL Trigger: CAGACAGCAGATGGAGGAGCAGGTTGCCCAGAAGTC...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CCA 90 bp | GACCCTGCTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTTGGGCTTCCTTGTGTGGTaGGGGGCTGCCCAGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: DPAGALRGDLEAAKPMFLGFLVW*GAAQLQ Trigger: TTGAAGCTGGGCAGCCCCCCACCACACAAGGAAGCC...CAAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CCA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGTCAGATGAGGGTTCTTaGAACCTGGTTCTATCAATC | + |
|
Preference number: 4 (lower is better) Translates to: ECAAGGEETADLPSKAGLSDEGS*NLVLSI Trigger: GATTGATAGAACCAGGTTCCAAGAACCCTCATCTGA...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR TCA 90 bp | GACCCTGCTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTTGCGGGTCCCCAGTTGGTaGTCAGATGAGGGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DPAGALRGDLEAAKPMFLRVPSW*SDEGSW Trigger: CCAAGAACCCTCATCTGATCACCAACTGGGGACCCG...CAAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTGAACCTTCAGCACCGTaGACAGGTTATGGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLEPSAP*TGYGKG Trigger: TCCTTTCCCATAACCTGTGCACGGTGCTGAAGGTTC...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GACCCTGCTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTTGTGTGCCATGGCCTCCTaGAATGCCTGCTCCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DPAGALRGDLEAAKPMFLCAMAS*NACSFM Trigger: CATGAAGGAGCAGGCATTGCAGGAGGCCATGGCACA...CAAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCTACTGCTCCAGGGCCTaGTTCCGCTCCAACTCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGSHTVHICAVFSSTVYCSRA*FRSNSN Trigger: GTTGGAGTTGGAGCGGAAGCAGGCCCTGGAGCAGTA...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GCAAATAATCTCATCTCTCGTTGGAGGAAAGGGCTGATTACAGTGAACACACAGTGGAGACCTTGCCGCTaGGGTCCAGGTCGAGCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: ANNLISRWRKGLITVNTQWRPCR*GPGRAR Trigger: CCGCGCTCGACCTGGACCGCAGCGGCAAGGTCTCCA...CTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTTGCTGCTGCTCCAGGTaGCACTTTTCCAGCTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSCCCSR*HFSSSA Trigger: GGCAGAGCTGGAAAAGTGGCACCTGGAGCAGCAGCA...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTGCCTCCTGCAATGCCTaGTCCTTCATGACACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSASCNA*SFMTRC Trigger: GCAGCGTGTCATGAAGGAGCAGGCATTGCAGGAGGC...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCTTAACTCCCTCATACTaGTCCAGGGCCTGCTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: GLKGSHTVHICAVFSSTVLTPSY*SRACFR Trigger: GCGGAAGCAGGCCCTGGAGCAGTATGAGGGAGTTAA...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CCA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGTTGTCAAAGTTGTCTTaGACCTTTTCCAAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECAAGGEETADLPSKAGLLSKLS*TFSKMN Trigger: GTTCATTTTGGAAAAGGTCCAAGACAACTTTGACAA...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR TCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTGCCATAGATACGGTCTaGCGGTCCATGCCCTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSAIDTV*RSMPLL Trigger: TAGCAAGGGCATGGACCGTCAGACCGTATCTATGGC...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTAGCTCCCGAACTCGCTaGAGATACTGCTCCAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSSSRTR*RYCSSS Trigger: CGAACTGGAGCAGTATCTGCAGCGAGTTCGGGAGCT...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTGCTTCAACAGATGGATaGTGGAGTAAATGGCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLASTDG*WSKWPE Trigger: TTCAGGCCATTTACTCCACCATCCATCTGTTGAAGC...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| 3UTR CAA 72 bp | AACCAGATTCCATCCACAAGGGCAGTGACTAGTGACTaGTCCATCAGAGCACCAACAGCGGAGGCTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NQIPSTRAVTSD*SIRAPTAEACH Trigger: ATGGCAAGCCTCCGCTGTTGGTGCTCTGATGGACAAGTCACTAGTCACTGCCCTTGTGGATGGAATCTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| 3UTR CAA 72 bp | ACTAGCAGCTGGGGACAGAACACCCAAAGAACTAAGTaGAGCCGCTGGGCCAGGATAAGTCTTGCTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSWGQNTQRTK*SRWARISLALR Trigger: CCTCAAAGCAAGACTTATCCTGGCCCAGCGGCTCAACTTAGTTCTTTGGGTGTTCTGTCCCCAGCTGCTAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCGCGACTTGGAGACCTTaGCGCTGCGGTCCAGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVATWRP*RCGPGR Trigger: TCGACCTGGACCGCAGCGGCAAGGTCTCCAAGTCGC...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTTGGAGTTCCTTCATCTaGCGCTCCAGCTCCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLWSSFI*RSSSSC Trigger: GCAGGAGGAGCTGGAGCGGCAGATGAAGGAACTCCA...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTTTTCTTTTCCTCGTCTaGCGCACGAGAGGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSFLFLV*RTRGCF Trigger: GAAGCAGCCTCTCGTGCGGCAGACGAGGAAAAGAAA...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCAACAGTCTCTTCATCCTaGCGGGCCTGCCTCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCHMGHLPVYNVKLLGCATVSSS*RACLSS Trigger: GGACGAGAGGCAGGCCCGGCAGGATGAAGAGACTGT...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATGCCTGGGTGAACGCTaGGGGTCCCCAGTTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LCHMGHLPVYNVKLLGCACLGER*GSPVGD Trigger: ATCACCAACTGGGGACCCGCAGCGTTCACCCAGGCA...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR TCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCTCCGCCTCTGTTGTCTaGATGGCCTGCTGCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVSASVV*MACCCS Trigger: GGAGCAGCAGCAGGCCATTCAGACAACAGAGGCGGA...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTTCGTCATCCCTAAAGTaGTCCTCAAGGGCAACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLSSSLK*SSRATG Trigger: CCCGGTTGCCCTTGAGGAGCACTTTAGGGATGACGA...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR GCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTTGCTGTTCCAGCTCCTaGTTCTCCGCCTCTGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLCCSSS*FSASVV Trigger: GACAACAGAGGCGGAGAAGCAGGAGCTGGAACAGCA...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTCAACTGTTCCAGCTGTaGCATGGCCTCCTGCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLQLFQL*HGLLQC Trigger: GCATTGCAGGAGGCCATGGCACAGCTGGAACAGTTG...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR TCA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTTGGATACTTGTCCTCTaGCAAAAAGTTGAAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: DPQALASVQTFHTGQYLLWILVL*QKVEND Trigger: GTCATTTTCAACTTTTTGTCAGAGGACAAGTATCCA...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR GCA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCAAGCGCGGTGAAGGCGTaGCAAATGGCTTTGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LCHMGHLPVYNVKLLGCASAVKA*QMALSS Trigger: ACTGCTCAAAGCCATTTGGCACGCCTTCACCGCGCT...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CCA 90 bp | GCAAATAATCTCATCTCTCGTTGGAGGAAAGGGCTGATTACAGTGAACACACAGGGCAACCGGGTCATGTaGAACCTTCAGCACCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ANNLISRWRKGLITVNTQGNRVM*NLQHRA Trigger: TGCACGGTGCTGAAGGTTCCACATGACCCGGTTGCC...CTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTACCGTGCACAGGTTATaGGAAAGGACCTTGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLTVHRL*ERTLSC Trigger: GCAACTCAAGGTCCTTTCCCATAACCTGTGCACGGT...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCGCATGTAGCCCTGATTaGAGACAGGCCCCTCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVACSPD*RQAPHR Trigger: ACGATGAGGGGCCTGTCTCCAATCAGGGCTACATGC...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTCTTTCCAGCTCCTGTTaGTTGTTTTCATTGGCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLLSSSC*LFSLAA Trigger: AGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAG...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCACCTGGCCTGAAGCTTaGGCACAGTCTCTTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVTWPEA*AQSLHP Trigger: AGGATGAAGAGACTGTGCGCAAGCTTCAGGCCAGGT...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCGACCCACACTTTAAATaGATCATCTTCTGTAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GLKGSHTVHICAVFSSTVDPHFK*IIFCNE Trigger: CTCATTACAGAAGATGATGCATTTAAAGTGTGGGTC...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTGTTGCTTGTTTTCATTaGCGGCTTGGAGTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLVACFH*RLGVPS Trigger: TGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAAC...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR TCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCCGTATTAATCCCTCATaGTGGGCCACTTTGTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVRINPS*WATLSF Trigger: GAAGGACAAAGTGGCCCATCATGAGGGATTAATACG...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | TTACAGATTCCAACTAGTGTGGTAAGGCTTACTTTCCAACCACTCATCTCCGTCTCCTCAAGAGCCTCCTaGAGCTTTAGGTACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIPTSVVRLTFQPLISVSSRAS*SFRYMS Trigger: AGACATGTACCTAAAGCTGCAGGAGGCTCTTGAGGA...GACGGAGATGAGTGGTTGGAAAGTAAGCCTTACCACACTAGTTGGAATCTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR GCA 90 bp | GCAAATAATCTCATCTCTCGTTGGAGGAAAGGGCTGATTACAGTGAACACACAGCTCAATAAGTTCCCATaGAGAAAGGCCATCTTTATT | + |
|
Preference number: 4 (lower is better) Translates to: ANNLISRWRKGLITVNTQLNKFP*RKAIFI Trigger: AATAAAGATGGCCTTTCTGCATGGGAACTTATTGAG...CTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS GCA 90 bp | TCATTGGCGGCTTGGAGTTCCTTCATCTGCCGCTCCAGCTCCTCCTaGTCGGCTAGCAGCTTCCTTCGGAGCTCTTTCCGACGCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SLAAWSSFICRSSSS*SASSFLRSSFRRWR Trigger: CCGCCAGCGTCGGAAAGAGCTCCGAAGGAAGCTGCTAGCCGAGCAGGAGGAGCTGGAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CAA 90 bp | GACCCCCAGGCCCTTGCTTCCGTCCAGACATTTCACACCGGCCAGTACCTTCTTTGCGACTTGGAGACCTaGCCGCTGCGGTCCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: DPQALASVQTFHTGQYLLCDLET*PLRSRS Trigger: CGACCTGGACCGCAGCGGCAAGGTCTCCAAGTCGCA...AAGAAGGTACTGGCCGGTGTGAAATGTCTGGACGGAAGCAAGGGCCTGGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS-3UTR CAA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGTCCAGCTCCTGTTGCTaGTTTTCATTGGCGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ECAAGGEETADLPSKAGLSSSCC*FSLAAW Trigger: CCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGA...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS GCA 90 bp | CTGCTCCAGGGCCTGCTTCCGCTCCAACTCCAACTGTTCCAGCTGTaGCATGGCCTCCTGCAATGCCTGCTCCTTCATGACACGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LLQGLLPLQLQLFQL*HGLLQCLLLHDTLL Trigger: CAGCAGCGTGTCATGAAGGAGCAGGCATTGCAGGAGGCCATGGCACAGCTGGAACAGTTGGAGTTGGAGCGGAAGCAGGCCCTGGAGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS CCA 90 bp | CTTCCTTCGGAGCTCTTTCCGACGCTGGCGGGCTTCCTTGTGTGGTaGGGGGCTGCCCAGCTTCAACAGATGGATGGTGGAGTAAATGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSELFPTLAGFLVW*GAAQLQQMDGGVNG Trigger: GCCATTTACTCCACCATCCATCTGTTGAAGCTGGGCAGCCCCCCACCACACAAGGAAGCCCGCCAGCGTCGGAAAGAGCTCCGAAGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS TCA 90 bp | TTCTCCCGCTCCAGCTCCGTGCTGAACCTGGTCTGTAGCTCCACCTaGGTCTGCAAGCGTTTCTTTTCCTCGTCTGCCGCACGAGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSRSSSVLNLVCSST*VCKRFFSSSAAREA Trigger: AGCCTCTCGTGCGGCAGACGAGGAAAAGAAACGCTTGCAGACTCAGGTGGAGCTACAGACCAGGTTCAGCACGGAGCTGGAGCGGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS GCA 90 bp | ACTCGCTGCAGATACTGCTCCAGTTCGGAGGACTTCTGGGCAACCTaGTCCTCCATCTGCTGTCTGATCAGCTTCTCCCGCTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TRCRYCSSSEDFWAT*SSICCLISFSRSSS Trigger: GGAGCTGGAGCGGGAGAAGCTGATCAGACAGCAGATGGAGGAGCAGGTTGCCCAGAAGTCCTCCGAACTGGAGCAGTATCTGCAGCGAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
||
| CDS GCA 90 bp | TGTGGTCTTCTTCTCTTTCCAGCTCTTCTCTCTCTCCTCGAGCTCTaGCTGGGTGAACGCTGCGGGTCCCCAGTTGGTGATCAGATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CGLLLFPALLSLLEL*LGERCGSPVGDQMR Trigger: CCTCATCTGATCACCAACTGGGGACCCGCAGCGTTCACCCAGGCAGAGCTCGAGGAGAGAGAGAAGAGCTGGAAAGAGAAGAAGACCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTACCTTGAGTTGCGACTaGGAGACCTTGCCGCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSTLSCD*ETLPLR Trigger: CCGCAGCGGCAAGGTCTCCAAGTCGCAACTCAAGGT...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GAATGCGCTGCCGGAGGGGAGGAGACAGCTGACCTCCCATCCAAGGCGGGGCTGTCAATCTTGTCAAAGTaGTCTTGGACCTTTTCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ECAAGGEETADLPSKAGLSILSK*SWTFSK Trigger: TTTGGAAAAGGTCCAAGACAACTTTGACAAGATTGA...CAGCCCCGCCTTGGATGGGAGGTCAGCTGTCTCCTCCCCTCCGGCAGCGCATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 90 bp | CTGAGTCTGCAAGCGTTTCTTTTCCTCGTCTGCCGCACGAGAGGCTaGTTCCTCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LSLQAFLFLVCRTRG*FLQFLPHAFQLLLL Trigger: AAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGAGGAAGCAGCCTCTCGTGCGGCAGACGAGGAAAAGAAACGCTTGCAGACTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 90 bp | CTCATCGTCATCCCTAAAGTGCTCCTCAAGGGCAACCGGGTCATGTaGAACCTTCAGCACCGTGCACAGGTTATGGGAAAGGACCTTGAG | + |
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Preference number: 5 (lower is better) Translates to: LIVIPKVLLKGNRVM*NLQHRAQVMGKDLE Trigger: CTCAAGGTCCTTTCCCATAACCTGTGCACGGTGCTGAAGGTTCCACATGACCCGGTTGCCCTTGAGGAGCACTTTAGGGATGACGATGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTGCTTTCCAGCTCCTGTaGCTTGTTTTCATTGGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSAFQLL*LVFIGG Trigger: GCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGC...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GACCCTGCTGGAGCCCTGAGGGGAGACTTAGAAGCAGCAAAGCCAATGTTCTTGCATTTCTTTCCATCTTaGTCAGGCAGAGACTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: DPAGALRGDLEAAKPMFLHFFPS*SGRDST Trigger: TGTGGAGTCTCTGCCTGACAAAGATGGAAAGAAATG...CAAGAACATTGGCTTTGCTGCTTCTAAGTCTCCCCTCAGGGCTCCAGCAGGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCTGTTGCTTGTTTTCATaGGCGGCTTGGAGTTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLKGSHTVHICAVFSSTVCCLFS*AAWSSF Trigger: GAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACA...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 90 bp | GTCATATGTGTTGCCATCTCTAGCTTCTTTTTAACTCCCTCATACTaGTCCAGGGCCTGCTTCCGCTCCAACTCCAACTGTTCCAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VICVAISSFFLTPSY*SRACFRSNSNCSSC Trigger: ACAGCTGGAACAGTTGGAGTTGGAGCGGAAGCAGGCCCTGGAGCAGTATGAGGGAGTTAAAAAGAAGCTAGAGATGGCAACACATATGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCAGTTTTCATTGGCGGCTaGGAGTTCCTTCATCTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LCHMGHLPVYNVKLLGCAVFIGG*EFLHLP Trigger: CGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAAC...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCATTATGGGAAAGGACCTaGAGTTGCGACTTGGAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LCHMGHLPVYNVKLLGCALWERT*SCDLET Trigger: GGTCTCCAAGTCGCAACTCAAGGTCCTTTCCCATAA...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTTTTGTGAGGTTTTTCTaGACACAAAGTGTCCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSFVRFF*TQSVQH Trigger: GTGTTGGACACTTTGTGTCAAGAAAAACCTCACAAA...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GGCCTAAAGGGGAGTCACACAGTTCACATCTGTGCGGTCTTCTCATCCACTGTCTCCTCTGACAAAAAGTaGAAAATGACCCACACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: GLKGSHTVHICAVFSSTVSSDKK*KMTHTL Trigger: TAAAGTGTGGGTCATTTTCAACTTTTTGTCAGAGGA...GACAGTGGATGAGAAGACCGCACAGATGTGAACTGTGTGACTCCCCTTTAGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTATGTTCAAATTGTTCTaGTTGCCAACCTCCTCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLMFKLF*LPTSSH Trigger: ATGGGAGGAGGTTGGCAACAAGAACAATTTGAACAT...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGAAGCTGGGAAGAGTCACCAACCAGATTCCATCCACAAGGGCAGTGACTAGTTCTAAAATAAGCTCATaGAAGACTTCGTTAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LKLGRVTNQIPSTRAVTSSKISS*KTSLMA Trigger: GGCCATTAACGAAGTCTTCAATGAGCTTATTTTAGA...ACTAGTCACTGCCCTTGTGGATGGAATCTGGTTGGTGACTCTTCCCAGCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GCAAATAATCTCATCTCTCGTTGGAGGAAAGGGCTGATTACAGTGAACACACAGTTCAAATTGTTCTTGTaGCCAACCTCCTCCCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: ANNLISRWRKGLITVNTQFKLFL*PTSSHS Trigger: GCTATGGGAGGAGGTTGGCAACAAGAACAATTTGAA...CTGTGTGTTCACTGTAATCAGCCCTTTCCTCCAACGAGAGATGAGATTATTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS TCA 90 bp | AAAATAAGCTCATTGAAGACTTCGTTAATGGCCATAGATACGGTCTaGCGGTCCATGCCCTTGCTAAACTGTCCATTCCCAATTAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KISSLKTSLMAIDTV*RSMPLLNCPFPISS Trigger: TGAGCTAATTGGGAATGGACAGTTTAGCAAGGGCATGGACCGTCAGACCGTATCTATGGCCATTAACGAAGTCTTCAATGAGCTTATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCATGGAGTTACTGCTGGTTACAGATTCCAACTAGTGTGGTAAGGCTTCTTGTCAAAGTTGTCTaGGACCTTTTCCAAAATGAA | + |
|
Preference number: 5 (lower is better) Translates to: GCAWSYCWLQIPTSVVRLLVKVV*DLFQNE Trigger: TTCATTTTGGAAAAGGTCCAAGACAACTTTGACAAG...AAGCCTTACCACACTAGTTGGAATCTGTAACCAGCAGTAACTCCATGCACAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS-3UTR CAA 90 bp | CTGTGCCACATGGGTCACCTTCCTGTTTATAATGTAAAGCTTCTTGGCTGTGCACTATTGAATTCAATCTaGTCAAAGTTGTCTTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: LCHMGHLPVYNVKLLGCALLNSI*SKLSWT Trigger: GGTCCAAGACAACTTTGACAAGATTGAATTCAATAG...TGCACAGCCAAGAAGCTTTACATTATAAACAGGAAGGTGACCCATGTGGCACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 90 bp | CTTTCTTATCTTTCAGATCCTCGCTCACATAGTAGGAAATTATGTTaGGTTTTAATACAAACCAGCGCTCAGTCCAGTTTTTCCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSYLSDPRSHSRKLC*VLIQTSAQSSFSVC Trigger: ACAAACGGAAAAACTGGACTGAGCGCTGGTTTGTATTAAAACCCAACATAATTTCCTACTATGTGAGCGAGGATCTGAAAGATAAGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | GAGCTCTTTCCGACGCTGGCGGGCTTCCTTGTGTGGTaGGGGGCTGCCCAGCTTCAACAGATGGATGGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: ELFPTLAGFLVW*GAAQLQQMDGG Trigger: TCCACCATCCATCTGTTGAAGCTGGGCAGCCCCCCACCACACAAGGAAGCCCGCCAGCGTCGGAAAGAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 72 bp | AGTTCGGAGGACTTCTGGGCAACCTGCTCCTCCATCTaGTGTCTGATCAGCTTCTCCCGCTCCAGCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSEDFWATCSSI*CLISFSRSSSV Trigger: CACGGAGCTGGAGCGGGAGAAGCTGATCAGACAGCAGATGGAGGAGCAGGTTGCCCAGAAGTCCTCCGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 72 bp | GGCCTGCTTCCGCTCCAACTCCAACTGTTCCAGCTGTaGCATGGCCTCCTGCAATGCCTGCTCCTTCATGAC | + |
|
Preference number: 6 (lower is better) Translates to: GLLPLQLQLFQL*HGLLQCLLLHD Trigger: GTCATGAAGGAGCAGGCATTGCAGGAGGCCATGGCACAGCTGGAACAGTTGGAGTTGGAGCGGAAGCAGGCC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | TCTTTCCAGCTCTTCTCTCTCTCCTCGAGCTCTGCCTaGGTGAACGCTGCGGGTCCCCAGTTGGTGATCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SFQLFSLSSSSA*VNAAGPQLVIR Trigger: TCTGATCACCAACTGGGGACCCGCAGCGTTCACCCAGGCAGAGCTCGAGGAGAGAGAGAAGAGCTGGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS TCA 72 bp | TCCAGCTCCGTGCTGAACCTGGTCTGTAGCTCCACCTaGGTCTGCAAGCGTTTCTTTTCCTCGTCTGCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSVLNLVCSST*VCKRFFSSSAA Trigger: TGCGGCAGACGAGGAAAAGAAACGCTTGCAGACTCAGGTGGAGCTACAGACCAGGTTCAGCACGGAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | ACTCGCTGCAGATACTGCTCCAGTTCGGAGGACTTCTaGGCAACCTGCTCCTCCATCTGCTGTCTGATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRCRYCSSSEDF*ATCSSICCLIS Trigger: GCTGATCAGACAGCAGATGGAGGAGCAGGTTGCCCAGAAGTCCTCCGAACTGGAGCAGTATCTGCAGCGAGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 72 bp | CTCCACCTGAGTCTGCAAGCGTTTCTTTTCCTCGTCTaGCGCACGAGAGGCTGCTTCCTCCAGTTTCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: LHLSLQAFLFLV*RTRGCFLQFLP Trigger: AGGAAGAAACTGGAGGAAGCAGCCTCTCGTGCGGCAGACGAGGAAAAGAAACGCTTGCAGACTCAGGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 90 bp | TCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTTGCTTGTTTTCATaGGCGGCTTGGAGTTCCTTCATCTGCCGCTCCAGCTCCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFFLTLSSSCCLFS*AAWSSFICRSSSSC Trigger: GCAGGAGGAGCTGGAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 90 bp | GCTGCTTCCTCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTTGCTaGTTTTCATTGGCGGCTTGGAGTTCCTTCATCTGCCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AASSSFFLTLSSSCC*FSLAAWSSFICRSS Trigger: GCTGGAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGAGGAAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 72 bp | AGCTTTAGGTACATGTCTTCCAGCTCCCGAACTCGCTaGAGATACTGCTCCAGTTCGGAGGACTTCTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SFRYMSSSSRTR*RYCSSSEDFWA Trigger: TGCCCAGAAGTCCTCCGAACTGGAGCAGTATCTGCAGCGAGTTCGGGAGCTGGAAGACATGTACCTAAAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS GCA 72 bp | AGCTTCTTTTTAACTCCCTCATACTGCTCCAGGGCCTaGTTCCGCTCCAACTCCAACTGTTCCAGCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFFLTPSYCSRA*FRSNSNCSSCA Trigger: GGCACAGCTGGAACAGTTGGAGTTGGAGCGGAAGCAGGCCCTGGAGCAGTATGAGGGAGTTAAAAAGAAGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | ATCCCTAAAGTGCTCCTCAAGGGCAACCGGGTCATGTaGAACCTTCAGCACCGTGCACAGGTTATGGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPKVLLKGNRVM*NLQHRAQVMGK Trigger: CTTTCCCATAACCTGTGCACGGTGCTGAAGGTTCCACATGACCCGGTTGCCCTTGAGGAGCACTTTAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | TCCTCACGCTTTCCAGCTCCTGTTGCTTGTTTTCATTaGCGGCTTGGAGTTCCTTCATCTGCCGCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRFPAPVACFH*RLGVPSSAAPA Trigger: AGCTGGAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 72 bp | TTCCTCACGCTTTCCAGCTCCTGTTGCTTGTTTTCATaGGCGGCTTGGAGTTCCTTCATCTGCCGCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLTLSSSCCLFS*AAWSSFICRSS Trigger: GCTGGAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 90 bp | AGAGGCTGCTTCCTCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTaGCTTGTTTTCATTGGCGGCTTGGAGTTCCTTCATCTGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: RGCFLQFLPHAFQLL*LVFIGGLEFLHLPL Trigger: GAGCGGCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGAGGAAGCAGCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS TCA 72 bp | TGGGTGAACGCTGCGGGTCCCCAGTTGGTGATCAGATaGGGGTTCTTGGAACCTGGTTCTATCAATCGTATT | + |
|
Preference number: 6 (lower is better) Translates to: WVNAAGPQLVIR*GFLEPGSINRI Trigger: AATACGATTGATAGAACCAGGTTCCAAGAACCCTCATCTGATCACCAACTGGGGACCCGCAGCGTTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 72 bp | TCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTTGCTaGTTTTCATTGGCGGCTTGGAGTTCCTTCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFFLTLSSSCC*FSLAAWSSFIC Trigger: GCAGATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 72 bp | TTCCTCCAGTTTCTTCCTCACGCTTTCCAGCTCCTGTaGCTTGTTTTCATTGGCGGCTTGGAGTTCCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: FLQFLPHAFQLL*LVFIGGLEFLH Trigger: ATGAAGGAACTCCAAGCCGCCAATGAAAACAAGCAACAGGAGCTGGAAAGCGTGAGGAAGAAACTGGAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS TCA 72 bp | TCATTGAAGACTTCGTTAATGGCCATAGATACGGTCTaGCGGTCCATGCCCTTGCTAAACTGTCCATTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLKTSLMAIDTV*RSMPLLNCPFP Trigger: TGGGAATGGACAGTTTAGCAAGGGCATGGACCGTCAGACCGTATCTATGGCCATTAACGAAGTCTTCAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CCA 72 bp | CTTTCAGATCCTCGCTCACATAGTAGGAAATTATGTTaGGTTTTAATACAAACCAGCGCTCAGTCCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSDPRSHSRKLC*VLIQTSAQSSF Trigger: AAAACTGGACTGAGCGCTGGTTTGTATTAAAACCCAACATAATTTCCTACTATGTGAGCGAGGATCTGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 90 bp | TTAAGCAGGTATTCAATCTCTTCTGGCACAATAATTAGTGGATACTaGTCCTCTGACAAAAAGTTGAAAATGACCCACACTTTAAATGCA | + |
|
Preference number: 6 (lower is better) Translates to: LSRYSISSGTIISGY*SSDKKLKMTHTLNA Trigger: TGCATTTAAAGTGTGGGTCATTTTCAACTTTTTGTCAGAGGACAAGTATCCACTAATTATTGTGCCAGAAGAGATTGAATACCTGCTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 72 bp | TATTCAATCTCTTCTGGCACAATAATTAGTGGATACTaGTCCTCTGACAAAAAGTTGAAAATGACCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: YSISSGTIISGY*SSDKKLKMTHT Trigger: AGTGTGGGTCATTTTCAACTTTTTGTCAGAGGACAAGTATCCACTAATTATTGTGCCAGAAGAGATTGAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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| CDS CAA 72 bp | AGGTTTTTCTTGACACAAAGTGTCCAACACATTCTATaGAATTCAATCTTGTCAAAGTTGTCTTGGACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RFFLTQSVQHIL*NSILSKLSWTF Trigger: AAAGGTCCAAGACAACTTTGACAAGATTGAATTCAATAGAATGTGTTGGACACTTTGTGTCAAGAAAAACCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033325.9 |
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