Pregenerated sensors for SVOP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042078Ensembl transcript IDs: ENSMUST00000058472.13, ENSMUST00000150106.2
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCGCCGTCTAGTAGGGCTGAGCGGGGAGCCCAGAAAGGCCTTAACTaGTCCAGGAGCGACTCTGGCTTCAGCCTCCCCATCGCCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SPSSRAERGAQKGLN*SRSDSGFSLPIARP Trigger: AGGCCTGGCGATGGGGAGGCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTTTCTGGGCTCCCCGCTCAGCCCTACTAGACGGCGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 90 bp | CCAGAGGGGGCAACAGGTTCCTGGTCCCAGGACTTAGTGATGCTTTaGCCTAGAGATCCCTCCTCAACCCATGCTGCCACCCACACAGGG | + |
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Preference number: 1 (lower is better) Translates to: PEGATGSWSQDLVML*PRDPSSTHAATHTG Trigger: CCCTGTGTGGGTGGCAGCATGGGTTGAGGAGGGATCTCTAGGGCAAAGCATCACTAAGTCCTGGGACCAGGAACCTGTTGCCCCCTCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 90 bp | CTCTCTGAAAGGGAGATCCTTGTGCCAGGACAGACTCCCAGGGCCTaGCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAGAAAGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: LSEREILVPGQTPRA*LCRASIALDRKKAE Trigger: CTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTCCTGGCACAAGGATCTCCCTTTCAGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 90 bp | GCTTCAGCCTCCCCATCGCCAGGCCTCAGTCTCCAAGTCAGGGAATaGGTTAACAACTTTCTGCGTCTGCTGCCTGGCGGGTATGTAGCT | + |
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Preference number: 1 (lower is better) Translates to: ASASPSPGLSLQVRE*VNNFLRLLPGGYVA Trigger: AGCTACATACCCGCCAGGCAGCAGACGCAGAAAGTTGTTAACCCATTCCCTGACTTGGAGACTGAGGCCTGGCGATGGGGAGGCTGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 90 bp | AATGGGGCCTGGCGGTCTCCTTCCTCCCACTGCGAGTTTCCTTCCTaGATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: NGAWRSPSSHCEFPS*ISEGGSCVPESGRM Trigger: CATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAGACCGCCAGGCCCCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 90 bp | CATCTTATCCTTCCTCCTCCTCTCTCTCTGAAAGGGAGATCCTTGTaGCAGGACAGACTCCCAGGGCCTGCCTCTGTAGGGCCAGCATTG | + |
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Preference number: 1 (lower is better) Translates to: HLILPPPLSLKGRSL*QDRLPGPASVGPAL Trigger: CAATGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTCCTGGCACAAGGATCTCCCTTTCAGAGAGAGAGGAGGAGGAAGGATAAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 90 bp | AGAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATaGCGGGCGTCCCAGGGGTCTGGGCGGAGACTATCTATGGAGACC | + |
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Preference number: 1 (lower is better) Translates to: RIPEARVQEKHNWTK*RASQGSGRRLSMET Trigger: GGTCTCCATAGATAGTCTCCGCCCAGACCCCTGGGACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 90 bp | GATGAACAGCGCAGCGCACATTTGGCTTCCTTGCAATGTGTCCATTaGGCAGTGACCAGTTTCCTCCGGCCTTTAATGGGGCCTGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: DEQRSAHLASLQCVH*AVTSFLRPLMGPGG Trigger: ACCGCCAGGCCCCATTAAAGGCCGGAGGAAACTGGTCACTGCTCAATGGACACATTGCAAGGAAGCCAAATGTGCGCTGCGCTGTTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 90 bp | CCTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATaGGTGGACAGCCCCAAGACAGACCTACCTACATCTTATCCTTCC | + |
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Preference number: 1 (lower is better) Translates to: PEFQKAAHVFRNLGG*VDSPKTDLPTSYPS Trigger: GGAAGGATAAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 90 bp | GTTTCCTTCCTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTaGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCTACATCTT | + |
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Preference number: 1 (lower is better) Translates to: VSFLNFRRRLMCSGI*EDAWTAPRQTYLHL Trigger: AAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAGGAAGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 90 bp | TTTAAATCCCATAGTAATGTCCGTCACCAACGTTTTAATAAGAGATaGACAGCGCAGCGCACATTTGGCTTCCTTGCAATGTGTCCATTG | + |
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Preference number: 1 (lower is better) Translates to: FKSHSNVRHQRFNKR*TAQRTFGFLAMCPL Trigger: CAATGGACACATTGCAAGGAAGCCAAATGTGCGCTGCGCTGTTCATCTCTTATTAAAACGTTGGTGACGGACATTACTATGGGATTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR TCA 90 bp | GAGCGGGGAGCCCAGAAAGGCCTTAACTGCTCCAGGAGCGACTCTGGCTTCAGCCTGCTCAGCTGGCTCTaGGCACCCTGGGACCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: ERGAQKGLNCSRSDSGFSLLSWL*APWDPP Trigger: GGGAGGGTCCCAGGGTGCTCAGAGCCAGCTGAGCAG...GCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTTTCTGGGCTCCCCGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR GCA 90 bp | CCCATGCAGATCCACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTGGCCCAGCTGGGCTCTaGCAGCTCTCTAGGCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: PMQIHGDVQPIPHHREPPGPAGL*QLSRLQ Trigger: TTGGAGCCTAGAGAGCTGGCAGAGCCCAGCTGGGCC...AGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTGGATCTGCATGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CAA 90 bp | TTGTGCCAGGACAGACTCCCAGGGCCTGCCTCTGTAGGGCCAGCATaGCCCTCGACAGAAAGAAAGCAGAGGCAGACCCAGAGGGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: LCQDRLPGPASVGPA*PSTERKQRQTQRGQ Trigger: TTGCCCCCTCTGGGTCTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTCCTGGCACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCCGGCCTTTAATGGGGCCTGGCGGTCTCCTTCCTCCCACTGCGAGTTTACCCCCTGGAGTGAATaGTGCCCCATCTTCCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: FPPAFNGAWRSPSSHCEFTPWSE*CPIFLG Trigger: CCCCAGGAAGATGGGGCAGCATTCACTCCAGGGGGT...AAACTCGCAGTGGGAGGAAGGAGACCGCCAGGCCCCATTAAAGGCCGGAGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR CCA 90 bp | GTTGTGGAGAGGCATCTAGAGGGGCCCAGCCAAGGTAGCAGCAGGGGGTGGGGGCAGGAGAAACATAACTaGACAAAATGGCGGGCGTCC | + |
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Preference number: 2 (lower is better) Translates to: VVERHLEGPSQGSSRGWGQEKHN*TKWRAS Trigger: GGACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTG...CCCCCACCCCCTGCTGCTACCTTGGCTGGGCCCCTCTAGATGCCTCTCCACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTAGAGATCCCTCCTCAACCCATGCTGCCACCCACACAGGGCAAAGTCTGCCACAGAGAACCCCCTaGAGTGAATGCTGCCCCATC | + |
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Preference number: 2 (lower is better) Translates to: CPRDPSSTHAATHTGQSLPQRTP*SECCPI Trigger: GATGGGGCAGCATTCACTCCAGGGGGTTCTCTGTGG...CAGACTTTGCCCTGTGTGGGTGGCAGCATGGGTTGAGGAGGGATCTCTAGGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR CCA 90 bp | GAGCGGGGAGCCCAGAAAGGCCTTAACTGCTCCAGGAGCGACTCTGGCTTCAGCGAGACCTTTGGGCAGTaGCTCTCCAAGGGTATGACT | + |
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Preference number: 2 (lower is better) Translates to: ERGAQKGLNCSRSDSGFSETFGQ*LSKGMT Trigger: AGTCATACCCTTGGAGAGCCACTGCCCAAAGGTCTC...GCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTTTCTGGGCTCCCCGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CAA 90 bp | CTACATCTTATCCTTCCTCCTCCTCTCTCTCTGAAAGGGAGATCCTaGTGCCAGGACAGACTCCCAGGGCCTGCCTCTGTAGGGCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LHLILPPPLSLKGRS*CQDRLPGPASVGPA Trigger: TGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTCCTGGCACAAGGATCTCCCTTTCAGAGAGAGAGGAGGAGGAAGGATAAGATGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR TCA 90 bp | GGCGGTCTCCTTCCTCCCACTGCGAGTTTCCTTCCTGAATTTCAGAAGGCGGCTCTCCTCCTCTCTCTCTaGAAGGGAGATCCTTGTGCC | + |
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Preference number: 2 (lower is better) Translates to: GGLLPPTASFLPEFQKAALLLSL*KGDPCA Trigger: GGCACAAGGATCTCCCTTTCAGAGAGAGAGGAGGAG...AGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAGACCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR CCA 90 bp | GAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATGGCGGGCGTGGCAGTGACCATAAGTaGCCCAGCTGGGCTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: EFLRPGCRRNITGQNGGRGSDHK*PSWALP Trigger: TGGCAGAGCCCAGCTGGGCCACTTATGGTCACTGCC...ACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR TCA 90 bp | CTTGCAATGTGTCCATTGAGCAGTGACCAGTTTCCTCCGGCCTTTAATGGGGCCGAGAACCCCCTGGAGTaGATGCTGCCCCATCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LAMCPLSSDQFPPAFNGAENPLE*MLPHLP Trigger: AGGAAGATGGGGCAGCATTCACTCCAGGGGGTTCTC...GGCCCCATTAAAGGCCGGAGGAAACTGGTCACTGCTCAATGGACACATTGCAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR TCA 90 bp | GGTCTCCTTCCTCCCACTGCGAGTTTCCTTCCTGAATTTCAGAAGGCGGCTCATGACTGGGTAGCAATGTaGCATCTGCTCAGCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GLLPPTASFLPEFQKAAHDWVAM*HLLSWL Trigger: GAGCCAGCTGAGCAGATGTCACATTGCTACCCAGTC...ATGAGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR GCA 90 bp | CTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAAAAGGGAGATCCTTGTaGCAGGACAGACTCCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: LNFRRRLMCSGIWEDAWTKGRSL*QDRLPG Trigger: CCCTGGGAGTCTGTCCTGGCACAAGGATCTCCCTTT...TGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR TCA 90 bp | GCTACTTGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTTCTACCCCCGCAGCATGGTCAAACACAGTaGAGACACAAAACCCTGTCG | + |
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Preference number: 2 (lower is better) Translates to: ATWLKFQSTFIGQFLPPQHGQTQ*RHKTLS Trigger: CGACAGGGTTTTGTGTCTTCACTGTGTTTGACCATG...CTGCGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 72 bp | GCACCCTGGGACCCTCCCTCACTAGCAGCTTCCCCATaGAGATCCACGGTGATGTGCAGCCCATCCCCCACC | + |
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Preference number: 3 (lower is better) Translates to: APWDPPSLAASP*RSTVMCSPSPT Trigger: GGTGGGGGATGGGCTGCACATCACCGTGGATCTGCATGGGGAAGCTGCTAGTGAGGGAGGGTCCCAGGGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 72 bp | AGGGAGATCCTTGTGCCAGGACAGACTCCCAGGGCCTaGCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAG | + |
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Preference number: 3 (lower is better) Translates to: REILVPGQTPRA*LCRASIALDRK Trigger: CTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTCCTGGCACAAGGATCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AGAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTaGACAAAATGGCGGGCGTCCCAGGGGTCTGGGCGG | + |
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Preference number: 3 (lower is better) Translates to: RIPEARVQEKHN*TKWRASQGSGR Trigger: CCGCCCAGACCCCTGGGACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AGCAGTGACCAGTTTCCTCCGGCCTTTAATGGGGCCTaGCGGTCTCCTTCCTCCCACTGCGAGTTTCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSDQFPPAFNGA*RSPSSHCEFPS Trigger: GGAAGGAAACTCGCAGTGGGAGGAAGGAGACCGCCAGGCCCCATTAAAGGCCGGAGGAAACTGGTCACTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCTTAACTGCTCCAGGAGCGACTCTGGCTTCAGCCTCCCCATCGCCAGGCTATCTATGGAGACCTTaGGGCAGTGGCTCTCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: KALTAPGATLASASPSPGYLWRP*GSGSPR Trigger: CCTTGGAGAGCCACTGCCCAAAGGTCTCCATAGATA...GCCTGGCGATGGGGAGGCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 72 bp | CAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATaGGTGGACAGCCCCAAGACAGACCTACCTACATCT | + |
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Preference number: 3 (lower is better) Translates to: QKAAHVFRNLGG*VDSPKTDLPTS Trigger: AGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | GCCTGGCGGGTATGTAGCTCTCCCCAGAAATATCACTaGACCCTCTGCAGCCAGAAACAGAGACTCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: AWRVCSSPQKYH*TLCSQKQRLHK Trigger: CTTGTGGAGTCTCTGTTTCTGGCTGCAGAGGGTCCAGTGATATTTCTGGGGAGAGCTACATACCCGCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AAAGCAGAGGCAGACCCAGAGGGGGCAACAGGTTCCTaGTCCCAGGACTTAGTGATGCTTTGCCCTAGAGAT | + |
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Preference number: 3 (lower is better) Translates to: KAEADPEGATGS*SQDLVMLCPRD Trigger: ATCTCTAGGGCAAAGCATCACTAAGTCCTGGGACCAGGAACCTGTTGCCCCCTCTGGGTCTGCCTCTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTaGACAGCCCCAAGACAGACCTACCTACATCTTATC | + |
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Preference number: 3 (lower is better) Translates to: RRLMCSGIWEDA*TAPRQTYLHLI Trigger: GATAAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | CTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTaGGAGGATGCGTGGACAGCCCCAAGACAGACCTAC | + |
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Preference number: 3 (lower is better) Translates to: LNFRRRLMCSGI*EDAWTAPRQTY Trigger: GTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 72 bp | TGGCGGTCTCCTTCCTCCCACTGCGAGTTTCCTTCCTaGATTTCAGAAGGCGGCTCATGTGTTCCGGAATCT | + |
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Preference number: 3 (lower is better) Translates to: WRSPSSHCEFPS*ISEGGSCVPES Trigger: AGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAGACCGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 72 bp | CGCAGCGCACATTTGGCTTCCTTGCAATGTGTCCATTaGGCAGTGACCAGTTTCCTCCGGCCTTTAATGGGG | + |
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Preference number: 3 (lower is better) Translates to: RSAHLASLQCVH*AVTSFLRPLMG Trigger: CCCCATTAAAGGCCGGAGGAAACTGGTCACTGCTCAATGGACACATTGCAAGGAAGCCAAATGTGCGCTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 72 bp | CGCATGACCCTCGATGATGAACATGGTCAAACACAGTaGAGACACAAAACCCTGTCGGTCCACATCGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: RMTLDDEHGQTQ*RHKTLSVHIAL Trigger: GAGGGCGATGTGGACCGACAGGGTTTTGTGTCTTCACTGTGTTTGACCATGTTCATCATCGAGGGTCATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR GCA 72 bp | GTATGTAGCTCTCCCCAGAAATATCACTGGACCCTCTaGAGCCAGAAACAGAGACTCCACAAGGGGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: VCSSPQKYHWTL*SQKQRLHKGPT Trigger: TGTTGGCCCCTTGTGGAGTCTCTGTTTCTGGCTGCAGAGGGTCCAGTGATATTTCTGGGGAGAGCTACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AGGGGCTACTTGGCTCAAATTCCAAAGCACTTTCATTaGCCAGTTTCTACCCCCGCAGGTTGTGGAGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: RGYLAQIPKHFH*PVSTPAGCGEA Trigger: TGCCTCTCCACAACCTGCGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CCA 72 bp | AAACAGAGACTCCACAAGGGGCCAACAGGGGCTACTTaGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTT | + |
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Preference number: 3 (lower is better) Translates to: KQRLHKGPTGAT*LKFQSTFIGQF Trigger: AAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCCTGTTGGCCCCTTGTGGAGTCTCTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR TCA 72 bp | CATAGTAATGTCCGTCACCAACGTTTTAATAAGAGATaGACAGCGCAGCGCACATTTGGCTTCCTTGCAATG | + |
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Preference number: 3 (lower is better) Translates to: HSNVRHQRFNKR*TAQRTFGFLAM Trigger: CATTGCAAGGAAGCCAAATGTGCGCTGCGCTGTTCATCTCTTATTAAAACGTTGGTGACGGACATTACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR GCA 90 bp | GCCTGCCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAGAAAGCAGAGGCAGACCCATGCCGCTGCAGGTaGCCAAACCCAGCGCCCTCG | + |
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Preference number: 4 (lower is better) Translates to: ACLCRASIALDRKKAEADPCRCR*PNPAPS Trigger: CGAGGGCGCTGGGTTTGGGCACCTGCAGCGGCATGG...GTCTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR GCA 90 bp | CACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTGGAGTGAATGCTCTCTCGCCATGCCGCTaGAGGTGCCCAAACCCAGCG | + |
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Preference number: 4 (lower is better) Translates to: HGDVQPIPHHREPPGVNALSPCR*RCPNPA Trigger: CGCTGGGTTTGGGCACCTGCAGCGGCATGGCGAGAG...AGCATTCACTCCAGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR GCA 90 bp | TGCCCTAGAGATCCCTCCTCAACCCATGCTGCCACCCACACAGGGCAAAGTCTGCGCCCACTCTCGCCATaGCGCTGCAGGTGCCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: CPRDPSSTHAATHTGQSLRPLSP*RCRCPN Trigger: GTTTGGGCACCTGCAGCGGCATGGCGAGAGTGGGCG...CAGACTTTGCCCTGTGTGGGTGGCAGCATGGGTTGAGGAGGGATCTCTAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CCA 90 bp | TCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCCCCACTCCCGGTGGCTaGACTCCTGCAGTGCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: SCVPESGRMRGQPQDRPTPTPGG*TPAVLG Trigger: GCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGG...GGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR GCA 90 bp | TGCCCTAGAGATCCCTCCTCAACCCATGCTGCCACCCACACAGGGCAAAGTCTGCGGTGGCTGGACTCCTaGAGTGCTCGGCCTTTGGTC | + |
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Preference number: 4 (lower is better) Translates to: CPRDPSSTHAATHTGQSLRWLDS*SARPLV Trigger: GACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCG...CAGACTTTGCCCTGTGTGGGTGGCAGCATGGGTTGAGGAGGGATCTCTAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| 3UTR CAA 72 bp | GACAGACTCCCAGGGCCTGCCTCTGTAGGGCCAGCATaGCCCTCGACAGAAAGAAAGCAGAGGCAGACCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRLPGPASVGPA*PSTERKQRQTQ Trigger: CTGGGTCTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCCTGGGAGTCTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | GTTGTGGAGAGGCATCTAGAGGGGCCCAGCCAAGGTAGCAGCAGGGGGTGGGGGAAAGGTCCCTCATTTTaGCTCGGTCTTCCTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVERHLEGPSQGSSRGWGKGPSF*LGLPVW Trigger: CCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTT...CCCCCACCCCCTGCTGCTACCTTGGCTGGGCCCCTCTAGATGCCTCTCCACAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | TGGCGGGCGTCCCAGGGGTCTGGGCGGAGACTATCTATGGAGACCTTTGGGCAGACTCACAGGCCAAGCTaGATTTGGCTTCCACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRASQGSGRRLSMETFGQTHRPS*IWLPLP Trigger: AGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGT...CTGCCCAAAGGTCTCCATAGATAGTCTCCGCCCAGACCCCTGGGACGCCCGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | CCCATGCAGATCCACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTGCTGGACTCCTGCAGTaGTCGGCCTTTGGTCTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PMQIHGDVQPIPHHREPPAGLLQ*SAFGLY Trigger: ATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGC...AGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTGGATCTGCATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGATACAGCGTCACCGACTaGGGCACCCCTCCAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRRLMCSGIWEDAWTAPRYSVTD*GTPPIP Trigger: TGGGATTGGAGGGGTGCCCCAGTCGGTGACGCTGTA...TCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | CTCCTTCCTCCCACTGCGAGTTTCCTTCCTGAATTTCAGAAGGCGGCTCATGTGCGGGCGCGAAGGCGCTaGGGATGCCATAGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLPPTASFLPEFQKAAHVRARRR*GCHSTG Trigger: CCCTGTACTATGGCATCCTCAGCGCCTTCGCGCCCG...CACATGAGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | TGGCTTCAGCCTCCCCATCGCCAGGCCTCAGTCTCCAAGTCAGGGAATGGGTTAGAGCACTCTCCCCTGTaGGTCGGAATTTCACCACCG | + |
|
Preference number: 4 (lower is better) Translates to: WLQPPHRQASVSKSGNGLEHSPL*VGISPP Trigger: CGGTGGTGAAATTCCGACGCACAGGGGAGAGTGCTC...TAACCCATTCCCTGACTTGGAGACTGAGGCCTGGCGATGGGGAGGCTGAAGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCTACATCTTATCCGCGCCACCTGCCAGCTaGGGAGTCGCCACTCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESGRMRGQPQDRPTYILSAPPAS*GVATRN Trigger: ATTGCGAGTGGCGACTCCCCAGCTGGCAGGTGGCGC...GGATAAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | TGGCGGGCGTCCCAGGGGTCTGGGCGGAGACTATCTATGGAGACCTTTGGGCAGGTTTTCCTGCCATACTaGTCCGAGATGTTTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRASQGSGRRLSMETFGQVFLPY*SEMFPQ Trigger: CTGGGGAAACATCTCGGACCAGTATGGCAGGAAAAC...CTGCCCAAAGGTCTCCATAGATAGTCTCCGCCCAGACCCCTGGGACGCCCGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGATGGCTCTGGCCTTCATaGGAAGGAACTCGGCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GGSCVPESGRMRGQPQDRWLWPS*EGTRRT Trigger: TGTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCA...TCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAGAAAGCAGAGGCAGGGCCTTTGGTCTCTATaGGCAGAAAGCAGGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPASVGPALPSTERKQRQGLWSL*AESRRP Trigger: TGGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCC...CTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GGGCCTGCCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAGAAAGCAGAGGCAGGCAGTGCTCGGCCTTTaGTCTCTATGGGCAGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPASVGPALPSTERKQRQAVLGL*SLWAES Trigger: GCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGC...CTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATGGCGGGCGTCGGCCAACCATCTCTTaGCCCCACTCCCGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: EFLRPGCRRNITGQNGGRRPTIS*PHSRWL Trigger: CAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCG...ACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | GAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATGGCGGGCGTGGCCCAGGCGGTCGATaGCCCACAGAGTCACAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFLRPGCRRNITGQNGGRGPGGR*PTESQG Trigger: TCCTTGTGACTCTGTGGGTCATCGACCGCCTGGGCC...ACGCCCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTTAACTGCTCCAGGAGCGACTCTGGCTTCAGCCTCCCCATCGCCAGGCGCTGAGGAGCCAGGATaGTCAGAATCATCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KALTAPGATLASASPSPGAEEPG*SESSSP Trigger: TGGAGATGATGATTCTGAGCATCCTGGCTCCTCAGC...GCCTGGCGATGGGGAGGCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | CACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTGGAGTGAATGCTTGTTTCCCCAGAGCGTaGAACTGGACATCATGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HGDVQPIPHHREPPGVNACFPRA*NWTSCR Trigger: TCGGCATGATGTCCAGTTCCACGCTCTGGGGAAACA...AGCATTCACTCCAGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTTAACTGCTCCAGGAGCGACTCTGGCTTCAGCCTCCCCATCGCCAGGCCCTCAATCAGCAAAATaGACTTGGCTCTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KALTAPGATLASASPSPGPQSAK*TWLWPS Trigger: TGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGG...GCCTGGCGATGGGGAGGCTGAAGCCAGAGTCGCTCCTGGAGCAGTTAAGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | CTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACATCCGGCTGGAGATGCTaGAGACGTCTCCTGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LNFRRRLMCSGIWEDAWTSGWRC*RRLLPG Trigger: TCCAGGCAGGAGACGTCTGCAGCATCTCCAGCCGGA...TGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | AGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGAGATTGGCAAACTCCTTaGGGACAGCGGCTCCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRRLMCSGIWEDAWTAPRDWQTP*GQRLHH Trigger: ATGATGGAGCCGCTGTCCCCAAGGAGTTTGCCAATC...TCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | TTTCCTCCGGCCTTTAATGGGGCCTGGCGGTCTCCTTCCTCCCACTGCGAGTTTCCGCATCTTCCACCATaGAAGTGTCATCAGTGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPAFNGAWRSPSSHCEFPHLPP*KCHQWD Trigger: ATCCCACTGATGACACTTTCATGGTGGAAGATGCGG...AAACTCGCAGTGGGAGGAAGGAGACCGCCAGGCCCCATTAAAGGCCGGAGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | GGTCTCCTTCCTCCCACTGCGAGTTTCCTTCCTGAATTTCAGAAGGCGGCTCATGCTGCAGACGTCTCCTaGCTGGAAGAGTTCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLLPPTASFLPEFQKAAHAADVS*LEEFRG Trigger: ACCACGGAACTCTTCCAGGCAGGAGACGTCTGCAGC...ATGAGCCGCCTTCTGAAATTCAGGAAGGAAACTCGCAGTGGGAGGAAGGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | CACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTGGAGTGAATGCTTCAGCAAAATGCACTTaGCTCTGGCCTTCATGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: HGDVQPIPHHREPPGVNASAKCT*LWPSWE Trigger: TTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGA...AGCATTCACTCCAGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GCCTGCCTCTGTAGGGCCAGCATTGCCCTCGACAGAAAGAAAGCAGAGGCAGACGTTGTCCAACGAAAGTaGGGTGTGAAAAGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ACLCRASIALDRKKAEADVVQRK*GVKRSL Trigger: GAGGGACCTTTTCACACCCCACTTTCGTTGGACAAC...GTCTGCCTCTGCTTTCTTTCTGTCGAGGGCAATGCTGGCCCTACAGAGGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | TCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCAGGCCAAGCTGCATTTaGCTTCCACTGCCTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SCVPESGRMRGQPQDRPTRPSCI*LPLPSS Trigger: GGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCT...GGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | GGGGCTACTTGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTTCTACCCCCGCACTCGCAATGCAGCTaGGGAGCCAGGATGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GATWLKFQSTFIGQFLPPHSQCS*GARMLR Trigger: TCTGAGCATCCTGGCTCCTCAGCTGCATTGCGAGTG...CGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | AGGGGTCTGGGCGGAGACTATCTATGGAGACCTTTGGGCAGTGGCTCTCCAAGGCCATGTAATCCTCTTTaGTCAGGTACTCACAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RGLGGDYLWRPLGSGSPRPCNPL*SGTHRP Trigger: TGGCCTGTGAGTACCTGAGCAAAGAGGATTACATGG...CCTTGGAGAGCCACTGCCCAAAGGTCTCCATAGATAGTCTCCGCCCAGACCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCTACATCTTATCCCATCATCCAGCTCGATaGCTTCTAGGCCCACTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: ESGRMRGQPQDRPTYILSHHPAR*LLGPLG Trigger: TCCGAGTGGGCCTAGAAGCCATCGAGCTGGATGATG...GGATAAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| 3UTR CAA 72 bp | CAGGGGCTACTTGGCTCAAATTCCAAAGCACTTTCATaGGCCAGTTTCTACCCCCGCAGGTTGTGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLLGSNSKALS*ASFYPRRLWRG Trigger: GCCTCTCCACAACCTGCGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | AGGGGTCTGGGCGGAGACTATCTATGGAGACCTTTGGGCAGTGGCTCTCCAAGGACAGAGAGCTTCCACTaGAATCTTCCAAACCCAATG | + |
|
Preference number: 4 (lower is better) Translates to: RGLGGDYLWRPLGSGSPRTESFH*NLPNPM Trigger: CATTGGGTTTGGAAGATTTCAGTGGAAGCTCTCTGT...CCTTGGAGAGCCACTGCCCAAAGGTCTCCATAGATAGTCTCCGCCCAGACCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GGGCTACTTGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTTCTACCCCCGCGCGATTGCCTTTTCCTaGTTCCCGGACAGCACATCG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGSNSKALSLASFYPRAIAFS*FPDSTS Trigger: CGATGTGCTGTCCGGGAACCAGGAAAAGGCAATCGC...GCGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | CAAAGAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATGGCGGCTGCCTTCTTCCGGCTaGAGATGCTGCAGACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRIPEARVQEKHNWTKWRLPSSG*RCCRRL Trigger: GAGACGTCTGCAGCATCTCCAGCCGGAAGAAGGCAG...CCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | CAAAGAATTCCTGAGGCCAGGGTGCAGGAGAAACATAACTGGACAAAATGGCGGGCTTTCCCAGAGGCATaGGGGCTCCATTTTCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QRIPEARVQEKHNWTKWRAFPEA*GLHFPL Trigger: CAACGGAAAATGGAGCCCCCATGCCTCTGGGAAAGC...CCGCCATTTTGTCCAGTTATGTTTCTCCTGCACCCTGGCCTCAGGAATTCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | GAATCTGGGAGGATGCGTGGACAGCCCCAAGACAGACCTACCTACATCTTATCCAACGAAAGTGGGGTGTaGAAAGGTCCCTCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESGRMRGQPQDRPTYILSNESGV*KGPSFC Trigger: GCAAAATGAGGGACCTTTTCACACCCCACTTTCGTT...GGATAAGATGTAGGTAGGTCTGTCTTGGGGCTGTCCACGCATCCTCCCAGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR TCA 90 bp | TCCAAGTCAGGGAATGGGTTAACAACTTTCTGCGTCTGCTGCCTGGCGGGTATGGATTCCAGCATCACCTaGGCTATGAACGGAGTAATG | + |
|
Preference number: 4 (lower is better) Translates to: SKSGNGLTTFCVCCLAGMDSSIT*AMNGVM Trigger: CATTACTCCGTTCATAGCTCAGGTGATGCTGGAATC...CATACCCGCCAGGCAGCAGACGCAGAAAGTTGTTAACCCATTCCCTGACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAGTCAGGGAATGGGTTAACAACTTTCTGCGTCTGCTGCCTGGCGGGTATGAAATGCACTTGGCTCTaGCCTTCATGGGAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SKSGNGLTTFCVCCLAGMKCTWL*PSWEGT Trigger: AGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTT...CATACCCGCCAGGCAGCAGACGCAGAAAGTTGTTAACCCATTCCCTGACTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR GCA 90 bp | TCCAAGTCAGGGAATGGGTTAACAACTTTCTGCGTCTGCTGCCTGGCGGGTATGCGTGTAAACATAGGCTaGTTGGAAGCCTCCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSGNGLTTFCVCCLAGMRVNIG*LEASRN Trigger: ATTTCTGGAGGCTTCCAAGCAGCCTATGTTTACACG...CATACCCGCCAGGCAGCAGACGCAGAAAGTTGTTAACCCATTCCCTGACTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| 3UTR CAA 72 bp | GAAACAGAGACTCCACAAGGGGCCAACAGGGGCTACTaGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ETETPQGANRGY*AQIPKHFHWPV Trigger: AACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCCTGTTGGCCCCTTGTGGAGTCTCTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTTCCTGAATTTCAGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATATCTTCCAAACCCAATaGCTTCCACCGCATCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFLNFRRRLMCSGIWEDIFQTQ*LPPHLP Trigger: TGGAAGATGCGGTGGAAGCCATTGGGTTTGGAAGAT...ATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCTGAAATTCAGGAAGGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS GCA 90 bp | GCTCCCCGGAAGCCGCATCGTCCTCTGACCGAGCACTCTCCCCTGTaGGTCGGAATTTCACCACCCGTCCTGAGCTCTGGGCGGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: APRKPHRPLTEHSPL*VGISPPVLSSGRVG Trigger: GCCTACCCGCCCAGAGCTCAGGACGGGTGGTGAAATTCCGACGCACAGGGGAGAGTGCTCGGTCAGAGGACGATGCGGCTTCCGGGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150106.2 |
||
| CDS CCA 90 bp | CTTGGCCCCACTCCCGGTGGCTGGACTCCTGCAGTGCTCGGCCTTTaGTCTCTATGGGCAGAAAGCAGGAGGCCACGCCAGCCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LGPTPGGWTPAVLGL*SLWAESRRPRQPGG Trigger: GCCTCCTGGCTGGCGTGGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS CCA 90 bp | GACCTGGGGACACCTGCGCTGTTTGTCCCTCGGCCAACCATCTCTTaGCCCCACTCCCGGTGGCTGGACTCCTGCAGTGCTCGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: DLGTPALFVPRPTIS*PHSRWLDSCSARPL Trigger: CAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGAGGGACAAACAGCGCAGGTGTCCCCAGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS GCA 90 bp | GCCAACCATCTCTTGGCCCCACTCCCGGTGGCTGGACTCCTGCAGTaGTCGGCCTTTGGTCTCTATGGGCAGAAAGCAGGAGGCCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: ANHLLAPLPVAGLLQ*SAFGLYGQKAGGHA Trigger: GGCGTGGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS GCA 90 bp | CCTCGGCCAACCATCTCTTGGCCCCACTCCCGGTGGCTGGACTCCTaGAGTGCTCGGCCTTTGGTCTCTATGGGCAGAAAGCAGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPTISWPHSRWLDS*SARPLVSMGRKQEA Trigger: GGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS TCA 90 bp | AGCAGCGCCACCTGCCAGCTGGGGAGTCGCCACTCGCAATGCAGCTaGGGAGCCAGGATGCTCAGAATCATCATCTCCATGGCATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSATCQLGSRHSQCS*GARMLRIIISMASA Trigger: GGCAGATGCCATGGAGATGATGATTCTGAGCATCCTGGCTCCTCAGCTGCATTGCGAGTGGCGACTCCCCAGCTGGCAGGTGGCGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
||
| CDS CCA 90 bp | TCATCCAGCTCGATGGCTTCTAGGCCCACTCGGACCCCCTCAATCTaGATGTCATGCTCCCCGGAAGCCGCATCGTCCTCTGACCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSMASRPTRTPSI*MSCSPEAASSSDRA Trigger: TGCTCGGTCAGAGGACGATGCGGCTTCCGGGGAGCATGACATCCAGATTGAGGGGGTCCGAGTGGGCCTAGAAGCCATCGAGCTGGATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
||
| CDS CCA 90 bp | TGTTTGTCCCTCGGCCAACCATCTCTTGGCCCCACTCCCGGTGGCTaGACTCCTGCAGTGCTCGGCCTTTGGTCTCTATGGGCAGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSLGQPSLGPTPGG*TPAVLGLWSLWAES Trigger: GCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGAGGGACAAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
||
| CDS-3UTR CAA 90 bp | CCCATGCAGATCCACGGTGATGTGCAGCCCATCCCCCACCACAGAGAACCCCCTCAGGCCAAGCTGCATTaGGCTTCCACTGCCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PMQIHGDVQPIPHHREPPQAKLH*ASTAFF Trigger: GAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTG...AGGGGGTTCTCTGTGGTGGGGGATGGGCTGCACATCACCGTGGATCTGCATGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 90 bp | GATTGGCAAACTCCTTGGGGACAGCGGCTCCATCATCCAGCTCGATaGCTTCTAGGCCCACTCGGACCCCCTCAATCTGGATGTCATGCT | + |
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Preference number: 5 (lower is better) Translates to: DWQTPWGQRLHHPAR*LLGPLGPPQSGCHA Trigger: AGCATGACATCCAGATTGAGGGGGTCCGAGTGGGCCTAGAAGCCATCGAGCTGGATGATGGAGCCGCTGTCCCCAAGGAGTTTGCCAATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS-3UTR CAA 90 bp | CACAGTGAAGACACAAAACCCTGTCGGTCCACATCGCCCTCTCGGGGGTGGGGGAAAAGGTCCCTCATTTaGCCTCGGTCTTCCTGTCTG | + |
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Preference number: 5 (lower is better) Translates to: HSEDTKPCRSTSPSRGWGKRSLI*PRSSCL Trigger: CAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTT...CCCCCACCCCCGAGAGGGCGATGTGGACCGACAGGGTTTTGTGTCTTCACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CAA 90 bp | AGAAGGCGGCTCATGTGTTCCGGAATCTGGGAGGATGCGTGGACAGCCCCAAGAACCACAGCAGCAGAGTaGTCCAACGAAAGTGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: RRRLMCSGIWEDAWTAPRTTAAE*SNESGV Trigger: CACCCCACTTTCGTTGGACAACTCTGCTGCTGTGGT...TCTTGGGGCTGTCCACGCATCCTCCCAGATTCCGGAACACATGAGCCGCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 90 bp | TCCCTATGGCCCAGAAGACCTCAATCAGCAAAATGCACTTGGCTCTaGCCTTCATGGGAAGGAACTCGGCGTACAGCGTCACCGACTGGG | + |
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Preference number: 5 (lower is better) Translates to: SLWPRRPQSAKCTWL*PSWEGTRRTASPTG Trigger: CCCAGTCGGTGACGCTGTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGGTCTTCTGGGCCATAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 90 bp | ACACGGTCCCTATGGCCCAGAAGACCTCAATCAGCAAAATGCACTTaGCTCTGGCCTTCATGGGAAGGAACTCGGCGTACAGCGTCACCG | + |
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Preference number: 5 (lower is better) Translates to: TRSLWPRRPQSAKCT*LWPSWEGTRRTASP Trigger: CGGTGACGCTGTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGGTCTTCTGGGCCATAGGGACCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CAA 90 bp | GGGGCTACTTGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTTCTACCCCCGAGAGCCATGGTCTTCTaGCGGCCCAGGCGGTCGATG | + |
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Preference number: 5 (lower is better) Translates to: GATWLKFQSTFIGQFLPPRAMVF*RPRRSM Trigger: CATCGACCGCCTGGGCCGCAAGAAGACCATGGCTCT...CGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CAA 90 bp | GCTACTTGGCTCAAATTCCAAAGCACTTTCATTGGCCAGTTTCTACCCCCGCAGTCGGCCAACCATCTCTaGGCCCCACTCCCGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: ATWLKFQSTFIGQFLPPQSANHL*APLPVA Trigger: AGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGA...CTGCGGGGGTAGAAACTGGCCAATGAAAGTGCTTTGGAATTTGAGCCAAGTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 90 bp | GGAACTCGGACAGGGTGGTCCACAGCAGGTCCATGTAATCCTCTTTaGTCAGGTACTCACAGGCCAAGCTGCATTTGGCTTCCACTGCCT | + |
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Preference number: 5 (lower is better) Translates to: GTRTGWSTAGPCNPL*SGTHRPSCIWLPLP Trigger: AGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGGATTACATGGACCTGCTGTGGACCACCCTGTCCGAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS TCA 90 bp | GGCTGGAGATGCTGCAGACGTCTCCTGCCTGGAAGAGTTCCGTGGTaGGCAGAACCAAGCCGTAGTAAGAGAAGGCATTGGAGAACCATA | + |
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Preference number: 5 (lower is better) Translates to: GWRCCRRLLPGRVPW*AEPSRSKRRHWRTI Trigger: TATGGTTCTCCAATGCCTTCTCTTACTACGGCTTGGTTCTGCTCACCACGGAACTCTTCCAGGCAGGAGACGTCTGCAGCATCTCCAGCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 90 bp | GCAGGTCCATGTAATCCTCTTTGCTCAGGTACTCACAGGCCAAGCTaGATTTGGCTTCCACTGCCTTCTTCCGGCTGGAGATGCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: AGPCNPLCSGTHRPS*IWLPLPSSGWRCCR Trigger: TCTGCAGCATCTCCAGCCGGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGGATTACATGGACCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CAA 90 bp | GACTTAGTGATGCTTTGCCCTAGAGATCCCTCCTCAACCCATGCTGCCACCCACATCAGCAAAATGCACTaGGCTCTGGCCTTCATGGGA | + |
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Preference number: 5 (lower is better) Translates to: DLVMLCPRDPSSTHAATHISKMH*ALAFMG Trigger: TCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGAT...GTGGGTGGCAGCATGGGTTGAGGAGGGATCTCTAGGGCAAAGCATCACTAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 90 bp | CCATTTTCCGTTGCAATCCGCTTTAAAGTAGCGATTGCCTTTTCCTaGTTCCCGGACAGCACATCGTACCTAGCACTCTCTGGCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PFSVAIRFKVAIAFS*FPDSTSYLALSGSQ Trigger: CTGGCTGCCAGAGAGTGCTAGGTACGATGTGCTGTCCGGGAACCAGGAAAAGGCAATCGCTACTTTAAAGCGGATTGCAACGGAAAATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS-3UTR CAA 90 bp | GGGAAGTTCTTGATGTCGGCAGTGACCATAAGTGGCCCAGCTGGGCTCTGCCAGGTAAACATAGGCTGCTaGGAAGCCTCCAGAAATAAA | + |
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Preference number: 5 (lower is better) Translates to: GKFLMSAVTISGPAGLCQVNIGC*EASRNK Trigger: TTTATTTCTGGAGGCTTCCAAGCAGCCTATGTTTAC...CTGGCAGAGCCCAGCTGGGCCACTTATGGTCACTGCCGACATCAAGAACTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 90 bp | TTGGAGAACCATATAAACCACAGCAGCAGAGTTGTCCAACGAAAGTaGGGTGTGAAAAGGTCCCTCATTTTGCCTCGGTCTTCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LENHINHSSRVVQRK*GVKRSLILPRSSCL Trigger: CAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCACTTTCGTTGGACAACTCTGCTGCTGTGGTTTATATGGTTCTCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 90 bp | TCTTGGCCCCACTCCCGGTGGCTGGACTCCTGCAGTGCTCGGCCTTaGGTCTCTATGGGCAGAAAGCAGGAGGCCACGCCAGCCAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: SWPHSRWLDSCSARP*VSMGRKQEATPARR Trigger: CCTCCTGGCTGGCGTGGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | CGGCCGAGAGCAGGAGCAGCCAGCGCCAGCCCAGGCTaGGCATCACAAACACAGCCAGAAGCACCTCGAACA | + |
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Preference number: 6 (lower is better) Translates to: RPRAGAASASPG*ASQTQPEAPRT Trigger: TGTTCGAGGTGCTTCTGGCTGTGTTTGTGATGCCCAGCCTGGGCTGGCGCTGGCTGCTCCTGCTCTCGGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | GAGAGCCAGAGTCCGACCTGGGGACACCTGCGCTGTTaGTCCCTCGGCCAACCATCTCTTGGCCCCACTCCC | + |
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Preference number: 6 (lower is better) Translates to: ESQSPTWGHLRC*SLGQPSLGPTP Trigger: GGGAGTGGGGCCAAGAGATGGTTGGCCGAGGGACAAACAGCGCAGGTGTCCCCAGGTCGGACTCTGGCTCTC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | CTCGGCCAACCATCTCTTGGCCCCACTCCCGGTGGCTaGACTCCTGCAGTGCTCGGCCTTTGGTCTCTATGG | + |
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Preference number: 6 (lower is better) Translates to: LGQPSLGPTPGG*TPAVLGLWSLW Trigger: CCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | ACACCTGCGCTGTTTGTCCCTCGGCCAACCATCTCTTaGCCCCACTCCCGGTGGCTGGACTCCTGCAGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TPALFVPRPTIS*PHSRWLDSCSA Trigger: AGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGTTGGCCGAGGGACAAACAGCGCAGGTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | CACTCCCGGTGGCTGGACTCCTGCAGTGCTCGGCCTTaGGTCTCTATGGGCAGAAAGCAGGAGGCCACGCCA | + |
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Preference number: 6 (lower is better) Translates to: HSRWLDSCSARP*VSMGRKQEATP Trigger: TGGCGTGGCCTCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | TCTAGGCCCACTCGGACCCCCTCAATCTGGATGTCATaGTCCCCGGAAGCCGCATCGTCCTCTGACCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRPTRTPSIWMS*SPEAASSSDRA Trigger: TGCTCGGTCAGAGGACGATGCGGCTTCCGGGGAGCATGACATCCAGATTGAGGGGGTCCGAGTGGGCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS GCA 72 bp | CTCTTGGCCCCACTCCCGGTGGCTGGACTCCTGCAGTaGTCGGCCTTTGGTCTCTATGGGCAGAAAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLAPLPVAGLLQ*SAFGLYGQKAG Trigger: TCCTGCTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | CTACTCCTGAGAGCCAGAGTCCGACCTGGGGACACCTaGGCTGTTTGTCCCTCGGCCAACCATCTCTTGGCC | + |
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Preference number: 6 (lower is better) Translates to: LLLRARVRPGDT*AVCPSANHLLA Trigger: GGCCAAGAGATGGTTGGCCGAGGGACAAACAGCGCAGGTGTCCCCAGGTCGGACTCTGGCTCTCAGGAGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | AAGCCGCATCGTCCTCTGACCGAGCACTCTCCCCTGTaGGTCGGAATTTCACCACCCGTCCTGAGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: KPHRPLTEHSPL*VGISPPVLSSG Trigger: CCCAGAGCTCAGGACGGGTGGTGAAATTCCGACGCACAGGGGAGAGTGCTCGGTCAGAGGACGATGCGGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150106.2 |
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| CDS TCA 72 bp | ACAGAGCCATGGTCTTCTTGCGGCCCAGGCGGTCGATaGCCCACAGAGTCACAAGGACACCTGGGAACTCGG | + |
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Preference number: 6 (lower is better) Translates to: TEPWSSCGPGGR*PTESQGHLGTR Trigger: CCGAGTTCCCAGGTGTCCTTGTGACTCTGTGGGTCATCGACCGCCTGGGCCGCAAGAAGACCATGGCTCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | ACCATCTCTTGGCCCCACTCCCGGTGGCTGGACTCCTaGAGTGCTCGGCCTTTGGTCTCTATGGGCAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: TISWPHSRWLDS*SARPLVSMGRK Trigger: CTTTCTGCCCATAGAGACCAAAGGCCGAGCACTGCAGGAGTCCAGCCACCGGGAGTGGGGCCAAGAGATGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | ACTCCTTGGGGACAGCGGCTCCATCATCCAGCTCGATaGCTTCTAGGCCCACTCGGACCCCCTCAATCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TPWGQRLHHPAR*LLGPLGPPQSG Trigger: TCCAGATTGAGGGGGTCCGAGTGGGCCTAGAAGCCATCGAGCTGGATGATGGAGCCGCTGTCCCCAAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS TCA 72 bp | ACCTGCCAGCTGGGGAGTCGCCACTCGCAATGCAGCTaGGGAGCCAGGATGCTCAGAATCATCATCTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: TCQLGSRHSQCS*GARMLRIIISM Trigger: CATGGAGATGATGATTCTGAGCATCCTGGCTCCTCAGCTGCATTGCGAGTGGCGACTCCCCAGCTGGCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS GCA 72 bp | CAGGTACTCACAGGCCAAGCTGCATTTGGCTTCCACTaGCTTCTTCCGGCTGGAGATGCTGCAGACGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QVLTGQAAFGFH*LLPAGDAADVS Trigger: GGAGACGTCTGCAGCATCTCCAGCCGGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | GGAGTCGCCACTCGCAATGCAGCTGAGGAGCCAGGATaGTCAGAATCATCATCTCCATGGCATCTGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: GVATRNAAEEPG*SESSSPWHLPS Trigger: GGATGGCAGATGCCATGGAGATGATGATTCTGAGCATCCTGGCTCCTCAGCTGCATTGCGAGTGGCGACTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS CCA 72 bp | CCTCAATCAGCAAAATGCACTTGGCTCTGGCCTTCATaGGAAGGAACTCGGCGTACAGCGTCACCGACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PQSAKCTWLWPS*EGTRRTASPTG Trigger: CCCAGTCGGTGACGCTGTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | CCTCTTTGCTCAGGTACTCACAGGCCAAGCTGCATTTaGCTTCCACTGCCTTCTTCCGGCTGGAGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PLCSGTHRPSCI*LPLPSSGWRCC Trigger: GCAGCATCTCCAGCCGGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 90 bp | AACACGGTCCCTATGGCCCAGAAGACCTCAATCAGCAAAATGCACTaGGCTCTGGCCTTCATGGGAAGGAACTCGGCGTACAGCGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: NTVPMAQKTSISKMH*ALAFMGRNSAYSVT Trigger: GGTGACGCTGTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGGTCTTCTGGGCCATAGGGACCGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | TCCTCTTTGCTCAGGTACTCACAGGCCAAGCTGCATTaGGCTTCCACTGCCTTCTTCCGGCTGGAGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SSLLRYSQAKLH*ASTAFFRLEML Trigger: CAGCATCTCCAGCCGGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | AGGGAGAAGATGATGAAACACAGAGCCATGGTCTTCTaGCGGCCCAGGCGGTCGATGACCCACAGAGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: REKMMKHRAMVF*RPRRSMTHRVT Trigger: TGTGACTCTGTGGGTCATCGACCGCCTGGGCCGCAAGAAGACCATGGCTCTGTGTTTCATCATCTTCTCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | CGCCGTGGGATACACCTCAGGCGTGTAAACATAGGCTaGTTGGAAGCCTCCAGAAATAAACGCTCTGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRGIHLRRVNIG*LEASRNKRSGD Trigger: ATCGCCAGAGCGTTTATTTCTGGAGGCTTCCAAGCAGCCTATGTTTACACGCCTGAGGTGTATCCCACGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | ACAGAGTCACAAGGACACCTGGGAACTCGGACAGGGTaGTCCACAGCAGGTCCATGTAATCCTCTTTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: TESQGHLGTRTG*STAGPCNPLCS Trigger: TGAGCAAAGAGGATTACATGGACCTGCTGTGGACCACCCTGTCCGAGTTCCCAGGTGTCCTTGTGACTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | ACCGCATCTTCCACCATGAAAGTGTCATCAGTGGGATaGGCAAACTCCTTGGGGACAGCGGCTCCATCATCC | + |
|
Preference number: 6 (lower is better) Translates to: TASSTMKVSSVG*ANSLGTAAPSS Trigger: GGATGATGGAGCCGCTGTCCCCAAGGAGTTTGCCAATCCCACTGATGACACTTTCATGGTGGAAGATGCGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058472.13 ENSMUST00000150106.2 |
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| CDS CAA 72 bp | CCTATGGCCCAGAAGACCTCAATCAGCAAAATGCACTaGGCTCTGGCCTTCATGGGAAGGAACTCGGCGTAC | + |
|
Preference number: 6 (lower is better) Translates to: PMAQKTSISKMH*ALAFMGRNSAY Trigger: GTACGCCGAGTTCCTTCCCATGAAGGCCAGAGCCAAGTGCATTTTGCTGATTGAGGTCTTCTGGGCCATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS TCA 72 bp | ACCACAGCAGCAGAGTTGTCCAACGAAAGTGGGGTGTaGAAAGGTCCCTCATTTTGCCTCGGTCTTCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TTAAELSNESGV*KGPSFCLGLPV Trigger: GACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCACTTTCGTTGGACAACTCTGCTGCTGTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | TGTAATCCTCTTTGCTCAGGTACTCACAGGCCAAGCTaGATTTGGCTTCCACTGCCTTCTTCCGGCTGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: CNPLCSGTHRPS*IWLPLPSSGWR Trigger: TCTCCAGCCGGAAGAAGGCAGTGGAAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGGATTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS GCA 72 bp | ACAGGGTGGTCCACAGCAGGTCCATGTAATCCTCTTTaGTCAGGTACTCACAGGCCAAGCTGCATTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: TGWSTAGPCNPL*SGTHRPSCIWL Trigger: AAGCCAAATGCAGCTTGGCCTGTGAGTACCTGAGCAAAGAGGATTACATGGACCTGCTGTGGACCACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | CGTGGGATACACCTCAGGCGTGTAAACATAGGCTGCTaGGAAGCCTCCAGAAATAAACGCTCTGGCGATGAA | + |
|
Preference number: 6 (lower is better) Translates to: RGIHLRRVNIGC*EASRNKRSGDE Trigger: TTCATCGCCAGAGCGTTTATTTCTGGAGGCTTCCAAGCAGCCTATGTTTACACGCCTGAGGTGTATCCCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | GTTGCAATCCGCTTTAAAGTAGCGATTGCCTTTTCCTaGTTCCCGGACAGCACATCGTACCTAGCACTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAIRFKVAIAFS*FPDSTSYLALS Trigger: AGAGAGTGCTAGGTACGATGTGCTGTCCGGGAACCAGGAAAAGGCAATCGCTACTTTAAAGCGGATTGCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CCA 72 bp | CATATAAACCACAGCAGCAGAGTTGTCCAACGAAAGTaGGGTGTGAAAAGGTCCCTCATTTTGCCTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: HINHSSRVVQRK*GVKRSLILPRS Trigger: AGACCGAGGCAAAATGAGGGACCTTTTCACACCCCACTTTCGTTGGACAACTCTGCTGCTGTGGTTTATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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| CDS CAA 72 bp | GTCCAACGAAAGTGGGGTGTGAAAAGGTCCCTCATTTaGCCTCGGTCTTCCTGTCTGGAGATGATAAGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: VQRKWGVKRSLI*PRSSCLEMISF Trigger: AAAGCTTATCATCTCCAGACAGGAAGACCGAGGCAAAATGAGGGACCTTTTCACACCCCACTTTCGTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058472.13 |
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