Pregenerated sensors for SV2C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051111Ensembl transcript IDs: ENSMUST00000161263.8, ENSMUST00000182289.2
Found 294 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGATATTCACCCACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTTaGTGGGGAGAGCAGGCAGGCTCAAAAACTGTCCAGAGACAAGGC | + |
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Preference number: 1 (lower is better) Translates to: QIFTHQEMLSCLPEG*WGEQAGSKTVQRQG Trigger: GCCTTGTCTCTGGACAGTTTTTGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTGAATATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | CTCGAAGGTCCTTTAGCTGACAGCTGGCCCGTGGGAACGTCCTGCTaGCCCCTCCCTCCTTCCATGCTCAGGAAGATTCCAGAGGTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LEGPLADSWPVGTSC*PLPPSMLRKIPEVK Trigger: TTTTACCTCTGGAATCTTCCTGAGCATGGAAGGAGGGAGGGGTCAGCAGGACGTTCCCACGGGCCAGCTGTCAGCTAAAGGACCTTCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | CAGAAAGGAAACACCCCCAGGAGGGTTGGCTTAGAGGCTGGTCTCTaGCATGCTGAGGCCCTGAAAAGAGAGCTTCTAGCATGCCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: QKGNTPRRVGLEAGL*HAEALKRELLACPE Trigger: CTCTGGGCATGCTAGAAGCTCTCTTTTCAGGGCCTCAGCATGCCAGAGACCAGCCTCTAAGCCAACCCTCCTGGGGGTGTTTCCTTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | GTCAGCTCTGCAGCTCTGGCTCTCATAGCCTGGATGTCCAGGCTCTaGGTACTCAGGTTATCTGCAGGGAACCACTTTCTCTCTGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: VSSAALALIAWMSRL*VLRLSAGNHFLSAA Trigger: AGCTGCAGAGAGAAAGTGGTTCCCTGCAGATAACCTGAGTACTCAGAGCCTGGACATCCAGGCTATGAGAGCCAGAGCTGCAGAGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | TGGGAGGCCCCACCTCCTTCCCCAACAAACCCAGGACCCTGTGTATaGTACGGAAGCATGCTACTGCTGAGTTATGGGAAGTTAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: WEAPPPSPTNPGPCV*YGSMLLLSYGKLDS Trigger: ACTGTCTAACTTCCCATAACTCAGCAGTAGCATGCTTCCGTAGCATACACAGGGTCCTGGGTTTGTTGGGGAAGGAGGTGGGGCCTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | GGGAAATGTGTGGGGAGTGGGCAAGACGGCAACCAAGAAGGCTTGTaGCCACTGATTGTCCAGGAGGTTATAGAAGAGATCCCTCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GKCVGSGQDGNQEGL*PLIVQEVIEEIPLG Trigger: CCCAAGAGGGATCTCTTCTATAACCTCCTGGACAATCAGTGGTCACAAGCCTTCTTGGTTGCCGTCTTGCCCACTCCCCACACATTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | CTCTACCCAACTCTCTCCTCTACCCAGCTCCACCGGTTTAATCAGTaGGCTAACAGACACACAGACTGTGTACCCCGTGGCTCGAAATGC | + |
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Preference number: 1 (lower is better) Translates to: LYPTLSSTQLHRFNQ*ANRHTDCVPRGSKC Trigger: GCATTTCGAGCCACGGGGTACACAGTCTGTGTGTCTGTTAGCTCACTGATTAAACCGGTGGAGCTGGGTAGAGGAGAGAGTTGGGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | CATGTGATAGATCTACGCTGCACACGAGCCATCCCACACAGAGCATaGCCTGTCACAAGGATACACATGGCCGTCTCGGGACTTTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: HVIDLRCTRAIPHRA*PVTRIHMAVSGLLV Trigger: CACTAAAAGTCCCGAGACGGCCATGTGTATCCTTGTGACAGGGCATGCTCTGTGTGGGATGGCTCGTGTGCAGCGTAGATCTATCACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | TATAGGGAAGCCCTGGCGATCGATCGATGGTTTGTGTGTGGTTGGTaGGAGACTGTTGACAGGGGAATGGGACAGTCAAGAGTGAAAGCG | + |
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Preference number: 1 (lower is better) Translates to: YREALAIDRWFVCGW*ETVDRGMGQSRVKA Trigger: CGCTTTCACTCTTGACTGTCCCATTCCCCTGTCAACAGTCTCTCACCAACCACACACAAACCATCGATCGATCGCCAGGGCTTCCCTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | GAAAGGTTACACACAGTGAAGAGGCTGAGGGAAATGTGTGGGGAGTaGGCAAGACGGCAACCAAGAAGGCTTGTGACCACTGATTGTCCA | + |
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Preference number: 1 (lower is better) Translates to: ERLHTVKRLREMCGE*ARRQPRRLVTTDCP Trigger: TGGACAATCAGTGGTCACAAGCCTTCTTGGTTGCCGTCTTGCCCACTCCCCACACATTTCCCTCAGCCTCTTCACTGTGTGTAACCTTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | TGGAGACTCCAGAAAGCTGACATGGGAGTTACTGAGGGTCACACATaGAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGT | + |
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Preference number: 1 (lower is better) Translates to: WRLQKADMGVTEGHT*STDIHYNRGTGPHS Trigger: ACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGCATGTGTGACCCTCAGTAACTCCCATGTCAGCTTTCTGGAGTCTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | GTTCTGTTCTGGCCCTGCCTCATTGGTGTCTTTCAAATCAATCAATaGTGCTTCGAAGATTCCCTGGTCAGCTCTGCAGCTCTGGCTCTC | + |
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Preference number: 1 (lower is better) Translates to: VLFWPCLIGVFQINQ*CFEDSLVSSAALAL Trigger: GAGAGCCAGAGCTGCAGAGCTGACCAGGGAATCTTCGAAGCATCATTGATTGATTTGAAAGACACCAATGAGGCAGGGCCAGAACAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | CCTGTAAACTCCCTGGCCTCCTGGTGTCAGAACCTGTTTTCTGGGTaGCTTATCGCAGAGGCAAGAGAAGGAAAAAGTCTGCAAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: PVNSLASWCQNLFSG*LIAEAREGKSLQDS Trigger: ACTGTCTTGCAGACTTTTTCCTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGGCCAGGGAGTTTACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | GTGGAGAGCTGCCAGCTTCCTGAAACAGGGAAAGGGCATGCACTATaGCTAAGAGATCCTGACAACTTCCTTTGGTCAGATGACAAGAGA | + |
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Preference number: 1 (lower is better) Translates to: VESCQLPETGKGHAL*LRDPDNFLWSDDKR Trigger: TCTCTTGTCATCTGACCAAAGGAAGTTGTCAGGATCTCTTAGCCATAGTGCATGCCCTTTCCCTGTTTCAGGAAGCTGGCAGCTCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | CTTTCAAATCAATCAATGATGCTTCGAAGATTCCCTGGTCAGCTCTaGAGCTCTGGCTCTCATAGCCTGGATGTCCAGGCTCTGAGTACT | + |
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Preference number: 1 (lower is better) Translates to: LSNQSMMLRRFPGQL*SSGSHSLDVQALST Trigger: AGTACTCAGAGCCTGGACATCCAGGCTATGAGAGCCAGAGCTGCAGAGCTGACCAGGGAATCTTCGAAGCATCATTGATTGATTTGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | AACCCCAAAGATCCTTTGCAGCTTCAAAACACTTGGCAACAACCCTaGAGCCCATTTCAAACTAGAACCTGTAAACTCCCTGGCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: NPKDPLQLQNTWQQP*SPFQTRTCKLPGLL Trigger: CAGGAGGCCAGGGAGTTTACAGGTTCTAGTTTGAAATGGGCTGCAGGGTTGTTGCCAAGTGTTTTGAAGCTGCAAAGGATCTTTGGGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | GCACCTGGCCTTCAGTTCTGTGTAGGTATTTACACAGACAAGGAGTaGCAGAGACTATATACCCTCTCTCTGTGTCTTGCTTCCTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: APGLQFCVGIYTDKE*QRLYTLSLCLASLE Trigger: CTCCAAGGAAGCAAGACACAGAGAGAGGGTATATAGTCTCTGGCACTCCTTGTCTGTGTAAATACCTACACAGAACTGAAGGCCAGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | AGAACCTGTAAACTCCCTGGCCTCCTGGTGTCAGAACCTGTTTTCTaGGTGACTTATCGCAGAGGCAAGAGAAGGAAAAAGTCTGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RTCKLPGLLVSEPVF*VTYRRGKRRKKSAR Trigger: TCTTGCAGACTTTTTCCTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGGCCAGGGAGTTTACAGGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | ACAGCAGGGTCAGCAGAACTTGATGGAGACTCCAGAAAGCTGACATaGGAGTTACTGAGGGTCACACATGCAGCACAGATATACACTACA | + |
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Preference number: 1 (lower is better) Translates to: TAGSAELDGDSRKLT*ELLRVTHAAQIYTT Trigger: TGTAGTGTATATCTGTGCTGCATGTGTGACCCTCAGTAACTCCCATGTCAGCTTTCTGGAGTCTCCATCAAGTTCTGCTGACCCTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | AAGAGGATTCCCCCTCCAACAAGACAGAGGCAGTTAAACAAAGAATaGTGTTTAAACACAGGCCTTACGATGGTTGCTATCACAGGCTGC | + |
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Preference number: 1 (lower is better) Translates to: KRIPPPTRQRQLNKE*CLNTGLTMVAITGC Trigger: GCAGCCTGTGATAGCAACCATCGTAAGGCCTGTGTTTAAACAGCATTCTTTGTTTAACTGCCTCTGTCTTGTTGGAGGGGGAATCCTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | TGGCATATAAATGTATACACACTTCCACATGTGATAGATCTACGCTaGACACGAGCCATCCCACACAGAGCATGCCCTGTCACAAGGATA | + |
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Preference number: 1 (lower is better) Translates to: WHINVYTLPHVIDLR*TRAIPHRACPVTRI Trigger: TATCCTTGTGACAGGGCATGCTCTGTGTGGGATGGCTCGTGTGCAGCGTAGATCTATCACATGTGGAAGTGTGTATACATTTATATGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | CTTATTAAACTGCATCTGGGTGTTGAGAAAAGTATAGGGAAGCCCTaGCGATCGATCGATGGTTTGTGTGTGGTTGGTGAGAGACTGTTG | + |
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Preference number: 1 (lower is better) Translates to: LIKLHLGVEKSIGKP*RSIDGLCVVGERLL Trigger: CAACAGTCTCTCACCAACCACACACAAACCATCGATCGATCGCCAGGGCTTCCCTATACTTTTCTCAACACCCAGATGCAGTTTAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | GTTTACCAATACCTGGGGTGCTATAGGGGTAGGAGGAGTCTGACCTaGAGTATTTGTCACTTTCCATGCTGTAATTGTTACAGCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: VYQYLGCYRGRRSLT*SICHFPCCNCYSCG Trigger: TCCACAGCTGTAACAATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATAGCACCCCAGGTATTGGTAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CCA 90 bp | GGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACATTTTaGCAATCAGAAATGAGACACAAAGGAGCATACCAGAAAGATGAG | + |
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Preference number: 1 (lower is better) Translates to: GRLGTFSEDALGPTF*QSEMRHKGAYQKDE Trigger: CTCATCTTTCTGGTATGCTCCTTTGTGTCTCATTTCTGATTGCCAAAATGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | AGTTTGTGTTCTGATACTTGGCCACCTTTCTATACATTAAAACTCTaGAGCTTTGAGTCAGGCAATACGACCGACCCACGGTGGGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SLCSDTWPPFYTLKL*SFESGNTTDPRWEE Trigger: TTCCTCCCACCGTGGGTCGGTCGTATTGCCTGACTCAAAGCTTCAGAGTTTTAATGTATAGAAAGGTGGCCAAGTATCAGAACACAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | CACACTGGAGGCCAAGCCTTAGATGATATTAACCCAAAAAGCATGTaGAAGAAGAACAGATGTACTCTACCCAACTCTCTCCTCTACCCA | + |
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Preference number: 1 (lower is better) Translates to: HTGGQALDDINPKSM*KKNRCTLPNSLLYP Trigger: TGGGTAGAGGAGAGAGTTGGGTAGAGTACATCTGTTCTTCTTTCACATGCTTTTTGGGTTAATATCATCTAAGGCTTGGCCTCCAGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | CATAAAGAACAGCTCTGGAGAAACAAACTTCTCCAGAGAGGCACCTaGTCTCTTTGCTGCTGTCTCTTCTTTGATCAATATCTTAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: HKEQLWRNKLLQRGT*SLCCCLFFDQYLSA Trigger: TGCACTAAGATATTGATCAAAGAAGAGACAGCAGCAAAGAGAGCAGGTGCCTCTCTGGAGAAGTTTGTTTCTCCAGAGCTGTTCTTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR TCA 90 bp | GCTTCTGTCGAATCTCATGGTTGGATCTTAACCTCTAATTATACCTaGACAAGCCACAGCATGTATTTGAGAAGCAACAAGAACCCTGTC | + |
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Preference number: 1 (lower is better) Translates to: ASVESHGWILTSNYT*TSHSMYLRSNKNPV Trigger: GACAGGGTTCTTGTTGCTTCTCAAATACATGCTGTGGCTTGTTCAGGTATAATTAGAGGTTAAGATCCAACCATGAGATTCGACAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR GCA 90 bp | GCAGTTAAACAAAGAATGCTGTTTAAACACAGGCCTTACGATGGTTaGTATCACAGGCTGCAAATCTACAAGGAGGCTTCAGATTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: AVKQRMLFKHRPYDG*YHRLQIYKEASDFK Trigger: TTTGAAATCTGAAGCCTCCTTGTAGATTTGCAGCCTGTGATAGCAACCATCGTAAGGCCTGTGTTTAAACAGCATTCTTTGTTTAACTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCCTTTAGCTGACAGCTaGCCCGTGGGAACGTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQPLADS*PVGTSC Trigger: GCAGGACGTTCCCACGGGCCAGCTGTCAGCTAAAGG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCGTGGGAACGTCCTGCTaGCCCCTCCCTCCTTCCATG | + |
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Preference number: 2 (lower is better) Translates to: GTVKSESDRTGRGELPASVGTSC*PLPPSM Trigger: CATGGAAGGAGGGAGGGGTCAGCAGGACGTTCCCAC...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGTTCCCTGGTCAGCTCTaGAGCTCTGGCTCTCATAGC | + |
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Preference number: 2 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRFPGQL*SSGSHS Trigger: GCTATGAGAGCCAGAGCTGCAGAGCTGACCAGGGAA...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCAGGACGTGGAGAGCTaGCAGCTTCCTGAAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQQDVES*QLPETG Trigger: CCCTGTTTCAGGAAGCTGGCAGCTCTCCACGTCCTG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGCGACTGTCTTGTCTGTaGCTCCCTGCTCTGTGTTCT | + |
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Preference number: 2 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRRLSCL*LPALCS Trigger: AGAACACAGAGCAGGGAGTCACAGACAAGACAGTCG...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CAA 90 bp | ACAGATATTCACCCACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTaGCTGGGGAGAGCAGGCAGGCTCAAAAACTGTCCAGAGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: TDIHPPGNAVLPAGG*LGRAGRLKNCPETR Trigger: CCTTGTCTCTGGACAGTTTTTGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTGAATATCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGTTTGTGTGTGGTTGGTaGGAGACTGTTGACAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQFVCGW*ETVDRG Trigger: TCCCCTGTCAACAGTCTCTCACCAACCACACACAAA...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCAGCTTCAAAACACTTaGCAACAACCCTGCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQQLQNT*QQPCSP Trigger: TGGGCTGCAGGGTTGTTGCCAAGTGTTTTGAAGCTG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCCTGGTGTCAGAACCTGTTTTCTGGGTGACTTATCGCAGAGGCAAGAGAAGTCACCCACCAGGAAATaGTGTCCTGCCTGCCGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PPGVRTCFLGDLSQRQEKSPTRK*CPACRR Trigger: CCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTGA...CTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGAGTACTCAGGTTATCTaGAGGGAACCACTTTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRSTQVI*REPLSL Trigger: GAGAGAAAGTGGTTCCCTGCAGATAACCTGAGTACT...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGAGGACACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTGGAGAAACGGATCAGGGAACATGTaGGGGGAAGGGAGGCAAGGC | + |
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Preference number: 2 (lower is better) Translates to: QRGHTYCLAPHKEQLWRNGSGNM*GEGRQG Trigger: GCCTTGCCTCCCTTCCCCTCACATGTTCCCTGATCC...GTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGGGACATGACCTGATGTaGAGATTTGGGCTAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRGHDLM*RFGLKM Trigger: CATTTTTAGCCCAAATCTCCACATCAGGTCATGTCC...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCGATTCTTGGCCTTTTaGCTGAGATCAAGTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQRFLAF*LRSSPS Trigger: AGAAGGACTTGATCTCAGCCAAAAGGCCAAGAATCG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | TATCATATTCTATTGTGGTTGGCAGAGAGTGTTCCCACGGAATGCTCTGGAAACCTGCCGGAGGGTTGCTaGGGAGAGCAGGCAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YHILLWLAESVPTECSGNLPEGC*GEQAGS Trigger: TGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAG...GTTTCCAGAGCATTCCGTGGGAACACTCTCTGCCAACCACAATAGAATATGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCTGGTGTCAGAACCTGTTTTCTGGGTGACTTATCGCAGAGGCAAGAGAAGAGAAGAGATCCCTCTTaGGCCACCTGGGAAGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: PPGVRTCFLGDLSQRQEKRRDPS*ATWEAW Trigger: CCAAGCTTCCCAGGTGGCCCAAGAGGGATCTCTTCT...CTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCTTCCTTTGGTCAGATaGCAAGAGAAATTTCACCTA | + |
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Preference number: 2 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQLPLVR*QEKFHL Trigger: TAGGTGAAATTTCTCTTGTCATCTGACCAAAGGAAG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAAGGGGGCGGGAAACCCTaGAAATCACACTGGCGGGGT | + |
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Preference number: 2 (lower is better) Translates to: YDCLVCDSLLCVLKETLQGGGKP*KSHWRG Trigger: ACCCCGCCAGTGTGATTTGCAGGGTTTCCCGCCCCC...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCACACAGGCCTTACGATaGTTGCTATCACAGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VYPGVKAHDTHNWGFCRITQALR*LLSQAA Trigger: TGCAGCCTGTGATAGCAACCATCGTAAGGCCTGTGT...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACAGACTGGACCACACAGTaGGACAGCAGACAGAGCACT | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTDWTTQ*DSRQST Trigger: AGTGCTCTGTCTGCTGTCCCACTGTGTGGTCCAGTC...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | GGTGTTGAGAAAAGTATAGGGAAGCCCTGGCGATCGATCGATGGTTaGTGTGTGGTTGGTGAGAGACTGTTGACAGGGGAATGGGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: GVEKSIGKPWRSIDG*CVVGERLLTGEWDS Trigger: ACTGTCCCATTCCCCTGTCAACAGTCTCTCACCAACCACACACAAACCATCGATCGATCGCCAGGGCTTCCCTATACTTTTCTCAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATAAATGCTGTCCTGCCTaGCGGAGGGTTGCTGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YRGRRSLTWSICHFPCCNKCCPA*RRVAGE Trigger: CTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTT...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR GCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCGTTCTGTTCTGGCCCTaGCTCATTGGTGTCTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: VYPGVKAHDTHNWGFCRIVLFWP*LIGVFQ Trigger: TTGAAAGACACCAATGAGGCAGGGCCAGAACAGAAC...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGCTGGCCCTGCCTCATTaGTGTCTTTCAAATCAATCA | + |
|
Preference number: 2 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQLALPH*CLSNQS Trigger: TGATTGATTTGAAAGACACCAATGAGGCAGGGCCAG...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGGAGCTGTGTCACTTCTaGAACAGCTTTCAATTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQELCHF*NSFQFP Trigger: AGGAAATTGAAAGCTGTTTCAGAAGTGACACAGCTC...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATTGGGTCATCCCATGCTaGCCCAACCCAGTGTCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: YRGRRSLTWSICHFPCCNWVIPC*PNPVSR Trigger: TCTGGACACTGGGTTGGGCCAGCATGGGATGACCCA...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAAGCTGAGGGAAATGTGTaGGGAGTGGGCAAGACGGCA | + |
|
Preference number: 2 (lower is better) Translates to: YDCLVCDSLLCVLKETLQAEGNV*GVGKTA Trigger: TGCCGTCTTGCCCACTCCCCACACATTTCCCTCAGC...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGAAATGCAGGTACAGATaGAGCTGTGTCACTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQKCRYR*SCVTSE Trigger: TTCAGAAGTGACACAGCTCCATCTGTACCTGCATTT...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCTATCATATTCTATTGTaGTTGGCAGAGAGTGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GTVKSESDRTGRGELPASYHILL*LAESVP Trigger: GGGAACACTCTCTGCCAACCACAATAGAATATGATA...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCCACCCCCAGGAGGGTTaGCTTAGAGGCTGGTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: AFQKFLKRKPLALRLWLSHPQEG*LRGWSL Trigger: CAGAGACCAGCCTCTAAGCCAACCCTCCTGGGGGTG...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGCTGATCAGGAGCACATaGTCTGTTCAATGTATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQLIRST*SVQCIP Trigger: TGGAATACATTGAACAGACCATGTGCTCCTGATCAG...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | GAGAAACTGAGGACCAGTATGCCCAGTGACTCGATTCTTGGCCTTTaGGCTGAGATCAAGTCCTTCTCCTTAGAAAGATCTCTGCCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: EKLRTSMPSDSILGL*AEIKSFSLERSLPA Trigger: AGCAGGCAGAGATCTTTCTAAGGAGAAGGACTTGATCTCAGCCAAAAGGCCAAGAATCGAGTCACTGGGCATACTGGTCCTCAGTTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR CAA 90 bp | CTCTGTGTCTTGCTTCCTTGGAGGATCCAGAACCCCAAAGATCCTTaGCAGCTTCAAAACACTTGGCAACAACCCTGCAGCCCATTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: LCVLLPWRIQNPKDP*QLQNTWQQPCSPFQ Trigger: TTGAAATGGGCTGCAGGGTTGTTGCCAAGTGTTTTGAAGCTGCAAAGGATCTTTGGGGTTCTGGATCCTCCAAGGAAGCAAGACACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGTGGGCATAGGCAACAGGACAAGTGCTCTAACCTATTGTATGAGTCTTCCGGAAGCCTGGTCAACTaGGACATTTTAGGAACACTT | + |
|
Preference number: 2 (lower is better) Translates to: GGGHRQQDKCSNLLYESSGSLVN*DILGTL Trigger: AAGTGTTCCTAAAATGTCTCAGTTGACCAGGCTTCC...GGAAGACTCATACAATAGGTTAGAGCACTTGTCCTGTTGCCTATGCCCACCCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGCGAAGGTCCTTTAGCTaGCAGCTGGCCCGTGGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLRRSFS*QLARGN Trigger: GTTCCCACGGGCCAGCTGTCAGCTAAAGGACCTTCG...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACATCCTTGTCCTGTATGTaGATGACACGGGATAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTSLSCM*MTRDSR Trigger: TCTGCTATCCCGTGTCATTCACATACAGGACAAGGA...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACATATAGATGGAGAAACTaGGGACCAGTATGCCCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTYRWRN*GPVCPV Trigger: CACTGGGCATACTGGTCCTCAGTTTCTCCATCTATA...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAACCCTCCCTCCTTCCATaGTCAGGAAGATTCCAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: YDCLVCDSLLCVLKETLQPSLLP*SGRFQR Trigger: CCTCTGGAATCTTCCTGAGCATGGAAGGAGGGAGGG...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACAGGCACCTGCTCTCTTTaGTGCTGTCTCTTCTTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTGTCSL*CCLFFD Trigger: ATCAAAGAAGAGACAGCAGCAAAGAGAGCAGGTGCC...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCACGACCGACCCACGGTaGGAGGAAGGGAATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: AFQKFLKRKPLALRLWLSTTDPR*EEGNGF Trigger: AAAGCCATTCCCTTCCTCCCACCGTGGGTCGGTCGT...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | CCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATaGGTGTCTTTCAAATCAATCAATGATGCTTCGAAGATTCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PGMRNRSEFCSGPAS*VSFKSINDASKIPW Trigger: CCAGGGAATCTTCGAAGCATCATTGATTGATTTGAAAGACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAAGTAACAGTGGACAGTTaGTCAAAGGAGGGTGGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: YDCLVCDSLLCVLKETLQVTVDS*SKEGGW Trigger: CCACCCACCCTCCTTTGATCAACTGTCCACTGTTAC...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCGTCCAGATAAAATTCTaGATGACTGTGTCTTGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VYPGVKAHDTHNWGFCRIVQIKF*MTVSCS Trigger: ACTGCAAGACACAGTCATTCAGAATTTTATCTGGAC...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACAGTTGCTATCACAGGCTaGAAATCTACAAGGAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTVAITG*KSTRRL Trigger: AAGCCTCCTTGTAGATTTGCAGCCTGTGATAGCAAC...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACAAGAAAGATCTCTGCCTaGTTAAGGACCCATTGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTRKISA*LRTHCS Trigger: AGAGCAATGGGTCCTTAAGCAGGCAGAGATCTTTCT...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGGACACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTGGAGAAACCATGACACTCATAACTaGGGCTTCTGTCGAATCTCA | + |
|
Preference number: 2 (lower is better) Translates to: QRGHTYCLAPHKEQLWRNHDTHN*GFCRIS Trigger: TGAGATTCGACAGAAGCCCCAGTTATGAGTGTCATG...GTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACAAGGAGGAGTCTGACCTaGAGTATTTGTCACTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KDTHGRLGTFSEDALGPTRRSLT*SICHFP Trigger: TGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCT...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATAACCAAGAAGGCTTGTaGCCACTGATTGTCCAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: YRGRRSLTWSICHFPCCNNQEGL*PLIVQE Trigger: CTCCTGGACAATCAGTGGTCACAAGCCTTCTTGGTT...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGGTGGGCATAGGCAACAGGACAAGTGCTCTAACCTATTGTATGAGTCTTCCCCCTCCTTAGAGACTTaGTTATTCTCTTGGAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: GGGHRQQDKCSNLLYESSPSLET*LFSWRI Trigger: TATTCTCCAAGAGAATAAGCAAGTCTCTAAGGAGGG...GGAAGACTCATACAATAGGTTAGAGCACTTGTCCTGTTGCCTATGCCCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGGACACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTGGAGAAACTCTGAAGGGGACAGATaGTCTTATAAAGAAGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QRGHTYCLAPHKEQLWRNSEGDR*SYKEGF Trigger: GAACCCTTCTTTATAAGACCATCTGTCCCCTTCAGA...GTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGGTCGAATCTCATGGTTaGATCTTAACCTCTAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQVESHG*ILTSNY Trigger: ATAATTAGAGGTTAAGATCCAACCATGAGATTCGAC...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | GCCAGCAGGGTCTATTTCTTACACCAGCACAGACTTTTTAGATTCTaGGTGAATGTAGTCCTTGGGGAAGCCTGGTCAACTGAGACATTT | + |
|
Preference number: 2 (lower is better) Translates to: ASRVYFLHQHRLFRF*VNVVLGEAWSTETF Trigger: AAATGTCTCAGTTGACCAGGCTTCCCCAAGGACTACATTCACCAAGAATCTAAAAAGTCTGTGCTGGTGTAAGAAATAGACCCTGCTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATACACGTAAGGCATCCTaGGGAAGAACTAGGGAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: YRGRRSLTWSICHFPCCNTRKAS*GRTREK Trigger: CTTTTCCCTAGTTCTTCCTCAGGATGCCTTACGTGT...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR TCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCGCCACAGCATGTATTTaGGAAGCAACAAGAACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: AFQKFLKRKPLALRLWLSATACI*EATRTL Trigger: CAGGGTTCTTGTTGCTTCTCAAATACATGCTGTGGC...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGAGAGGACACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTGGAGAAACTTGCAGCAATTTTGTTaGATGCCACATTCAACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: QRGHTYCLAPHKEQLWRNLQQFC*MPHSTK Trigger: TTTGGTTGAATGTGGCATGCAACAAAATTGCTGCAA...GTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | TTTGAATGGGAAGATAGGGATTCATATCTTACTTTTGCAGCAATTTaGTTGCATGCCACATTCAACCAAAAGGTCTGCTCTGGGCCTCAA | + |
|
Preference number: 2 (lower is better) Translates to: FEWEDRDSYLTFAAI*LHATFNQKVCSGPQ Trigger: TTGAGGCCCAGAGCAGACCTTTTGGTTGAATGTGGCATGCAACAAAATTGCTGCAAAAGTAAGATATGAATCCCTATCTTCCCATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATCTGTGTCTTGCAGTTTaGAATGTACTTGTAGCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: YRGRRSLTWSICHFPCCNLCLAV*NVLVAK Trigger: TTTAGCTACAAGTACATTCCAAACTGCAAGACACAG...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | TATTGTATGAGTCTTCCCAAGCCAACTCCCACCCTCCTTAGAGACTaGCTTATTCTCTTGGAGAATAAAATAGAACCATTCTTTTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: YCMSLPKPTPTLLRD*LILLENKIEPFFFS Trigger: AGAGAAAAAGAATGGTTCTATTTTATTCTCCAAGAGAATAAGCAAGTCTCTAAGGAGGGTGGGAGTTGGCTTGGGAAGACTCATACAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 90 bp | ATCACTACCACAGCAGGCCAGAGTAGAGAAAGCAATGCCTTTGATTaGTATGGTTTGTTTGCTTGTTTGTTTGTTTGTTTGTTTGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ITTTAGQSRESNAFD*YGLFACLFVCLFVL Trigger: CAAAACAAACAAACAAACAAACAAACAAGCAAACAAACCATACAAATCAAAGGCATTGCTTTCTCTACTCTGGCCTGCTGTGGTAGTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGCAGTTAAACAAAGAATaGTGTTTAAACACAGGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLQLNKE*CLNTGL Trigger: AAGGCCTGTGTTTAAACAGCATTCTTTGTTTAACTG...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | AGGGGCACCGGGCAAGAGACTCGAAGGTCCTTTAGCTaGCAGCTGGCCCGTGGGAACGTCCTGCTGACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: RGTGQETRRSFS*QLARGNVLLTP Trigger: AGGGGTCAGCAGGACGTTCCCACGGGCCAGCTGTCAGCTAAAGGACCTTCGAGTCTCTTGCCCGGTGCCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TCACAAGCCCAAGGGGACATTCAACTCCACCTGGCCTaGATCAGTACGTTGGGAGGCCCCACCTCCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SQAQGDIQLHLA*ISTLGGPTSFP Trigger: GGGGAAGGAGGTGGGGCCTCCCAACGTACTGATCCAGGCCAGGTGGAGTTGAATGTCCCCTTGGGCTTGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGCTGCTTAAGGACCCATaGCTCTTGGGTCATGGGCGA | + |
|
Preference number: 3 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRLLKDP*LLGHGR Trigger: TCGCCCATGACCCAAGAGCAATGGGTCCTTAAGCAG...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CCTTTAGCTGACAGCTGGCCCGTGGGAACGTCCTGCTaGCCCCTCCCTCCTTCCATGCTCAGGAAGATTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLADSWPVGTSC*PLPPSMLRKIP Trigger: TGGAATCTTCCTGAGCATGGAAGGAGGGAGGGGTCAGCAGGACGTTCCCACGGGCCAGCTGTCAGCTAAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | CACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTTGCTaGGGAGAGCAGGCAGGCTCAAAAACTGTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HQEMLSCLPEGC*GEQAGSKTVQR Trigger: TCTCTGGACAGTTTTTGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | GGGACATTCAACTCCACCTGGCCTGGATCAGTACGTTaGGAGGCCCCACCTCCTTCCCCAACAAACCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTFNSTWPGSVR*EAPPPSPTNPG Trigger: TCCTGGGTTTGTTGGGGAAGGAGGTGGGGCCTCCCAACGTACTGATCCAGGCCAGGTGGAGTTGAATGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGTGTAACAGTGGACAGTaGATCAAAGGAGGGTGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRCNSGQ*IKGGWV Trigger: CACCCACCCTCCTTTGATCAACTGTCCACTGTTACA...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | AACAGATATTCACCCACCAGGAAATGCTGTCCTGCCTaGCGGAGGGTTGCTGGGGAGAGCAGGCAGGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NRYSPTRKCCPA*RRVAGESRQAQ Trigger: TTGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTGAATATCTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | GTAAAACAGATATTCACCCACCAGGAAATGCTGTCCTaGCTGCCGGAGGGTTGCTGGGGAGAGCAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: VKQIFTHQEMLS*LPEGCWGEQAG Trigger: GCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTGAATATCTGTTTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CAGGAGGGTTGGCTTAGAGGCTGGTCTCTGGCATGCTaGGGCCCTGAAAAGAGAGCTTCTAGCATGCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QEGWLRGWSLAC*GPEKRASSMPR Trigger: TCTGGGCATGCTAGAAGCTCTCTTTTCAGGGCCTCAGCATGCCAGAGACCAGCCTCTAAGCCAACCCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AACACCCCCAGGAGGGTTGGCTTAGAGGCTGGTCTCTaGCATGCTGAGGCCCTGAAAAGAGAGCTTCTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NTPRRVGLEAGL*HAEALKRELLA Trigger: TGCTAGAAGCTCTCTTTTCAGGGCCTCAGCATGCCAGAGACCAGCCTCTAAGCCAACCCTCCTGGGGGTGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | CAAACCAAGGACAGGACCGAGTTGCCAAAAGCCGGGTaGGGTTATAGTCCGAGGTGGAAGCGGACCTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: QTKDRTELPKAG*GYSPRWKRTSS Trigger: AGAAGAGGTCCGCTTCCACCTCGGACTATAACCCCACCCGGCTTTTGGCAACTCGGTCCTGTCCTTGGTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | TGGTTGAGCCTGTTCCCAGCCATGGCTGGCTTTAGATaGCACCATCCCTTCTGGTCTGGATGGTCAGTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: WLSLFPAMAGFR*HHPFWSGWSVL Trigger: GAGGACTGACCATCCAGACCAGAAGGGATGGTGTCATCTAAAGCCAGCCATGGCTGGGAACAGGCTCAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | TGGCATGCTGAGGCCCTGAAAAGAGAGCTTCTAGCATaGCCAGAGAGGACACACTTACTGCCTAGCTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: WHAEALKRELLA*PERTHLLPSSP Trigger: TGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTGGGCATGCTAGAAGCTCTCTTTTCAGGGCCTCAGCATGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTaGTGTCAGGGAAGGTATTTGGCTTGGTGTAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: RAPGRCSGTGSP*CQGRYLAWCKS Trigger: GCTTTTACACCAAGCCAAATACCTTCCCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCCCAGTGACTCGATTCTaGGCCTTTTGGCTGAGATCA | + |
|
Preference number: 3 (lower is better) Translates to: GTVKSESDRTGRGELPASPVTRF*AFWLRS Trigger: TGATCTCAGCCAAAAGGCCAAGAATCGAGTCACTGG...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | AGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCTaGAACAGGGAAAGGGCATGCACTATGGCTAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SDRTGRGELPAS*NRERACTMAKR Trigger: TCTCTTAGCCATAGTGCATGCCCTTTCCCTGTTTCAGGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | GCCCTGGCGATCGATCGATGGTTTGTGTGTGGTTGGTaGGAGACTGTTGACAGGGGAATGGGACAGTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: ALAIDRWFVCGW*ETVDRGMGQSR Trigger: TCTTGACTGTCCCATTCCCCTGTCAACAGTCTCTCACCAACCACACACAAACCATCGATCGATCGCCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | ACTCTCTCCTCTACCCAGCTCCACCGGTTTAATCAGTaGGCTAACAGACACACAGACTGTGTACCCCGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TLSSTQLHRFNQ*ANRHTDCVPRG Trigger: GCCACGGGGTACACAGTCTGTGTGTCTGTTAGCTCACTGATTAAACCGGTGGAGCTGGGTAGAGGAGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CCACCTCCTTCCCCAACAAACCCAGGACCCTGTGTATaGTACGGAAGCATGCTACTGCTGAGTTATGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: PPPSPTNPGPCV*YGSMLLLSYGK Trigger: CTTCCCATAACTCAGCAGTAGCATGCTTCCGTAGCATACACAGGGTCCTGGGTTTGTTGGGGAAGGAGGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCCATATTCTATTGTGGTaGGCAGAGAGTGTTCCCACG | + |
|
Preference number: 3 (lower is better) Translates to: GTVKSESDRTGRGELPASHILLW*AESVPT Trigger: CGTGGGAACACTCTCTGCCAACCACAATAGAATATG...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CAATCAATGATGCTTCGAAGATTCCCTGGTCAGCTCTaGAGCTCTGGCTCTCATAGCCTGGATGTCCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSMMLRRFPGQL*SSGSHSLDVQA Trigger: AGCCTGGACATCCAGGCTATGAGAGCCAGAGCTGCAGAGCTGACCAGGGAATCTTCGAAGCATCATTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AAGGTTACACACAGTGAAGAGGCTGAGGGAAATGTGTaGGGAGTGGGCAAGACGGCAACCAAGAAGGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: KVTHSEEAEGNV*GVGKTATKKAC Trigger: ACAAGCCTTCTTGGTTGCCGTCTTGCCCACTCCCCACACATTTCCCTCAGCCTCTTCACTGTGTGTAACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGTCGATTCTTGGCCTTTaGGCTGAGATCAAGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQSILGL*AEIKSF Trigger: GAAGGACTTGATCTCAGCCAAAAGGCCAAGAATCGA...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGAGATATACGACTGTCTaGTCTGTGACTCCCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQRYTTV*SVTPCS Trigger: AGAGCAGGGAGTCACAGACAAGACAGTCGTATATCT...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGGATGGGCAATGGTTGTAGTTTAAGCACCTGGCCTTCAGTTCTGTGTAGGCCCTCTCTCTGTGTCTaGCTTCCTTGGAGGATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PRMGNGCSLSTWPSVLCRPSLCV*LPWRIQ Trigger: CTGGATCCTCCAAGGAAGCAAGACACAGAGAGAGGG...CCTACACAGAACTGAAGGCCAGGTGCTTAAACTACAACCATTGCCCATCCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGAGCCACAGCATGTATTaGAGAAGCAACAAGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQSHSMY*RSNKNP Trigger: AGGGTTCTTGTTGCTTCTCAAATACATGCTGTGGCT...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | GACCCATTGCTCTTGGGTCATGGGCGAGTACTAGTATaGGATGAGTCGGGAAGTAGGACTGAATGTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: DPLLLGHGRVLV*DESGSRTECEA Trigger: AGCCTCACATTCAGTCCTACTTCCCGACTCATCTCATACTAGTACTCGCCCATGACCCAAGAGCAATGGGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | TCCCTGGCCTCCTGGTGTCAGAACCTGTTTTCTGGGTaGCTTATCGCAGAGGCAAGAGAAGGAAAAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLASWCQNLFSG*LIAEAREGKSL Trigger: CAGACTTTTTCCTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGGCCAGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | CTGCATCTGGGTGTTGAGAAAAGTATAGGGAAGCCCTaGCGATCGATCGATGGTTTGTGTGTGGTTGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LHLGVEKSIGKP*RSIDGLCVVGE Trigger: CTCACCAACCACACACAAACCATCGATCGATCGCCAGGGCTTCCCTATACTTTTCTCAACACCCAGATGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CTTGGTGAATGTAGTCCTTGGGGAAGCCTGGTCAACTaGGACATTTTAGGAACACTTCCACTGGGCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LGECSPWGSLVN*DILGTLPLGTE Trigger: CTCAGTGCCCAGTGGAAGTGTTCCTAAAATGTCTCAGTTGACCAGGCTTCCCCAAGGACTACATTCACCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CATGTGTGGTCTACTTCCAAGTGTCTGTCTTTTAACTaGAGTGTGTCTTCTGGGGCGGTACATTCCCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: HVWSTSKCLSFN*SVSSGAVHSLG Trigger: ACCCAGGGAATGTACCGCCCCAGAAGACACACTGCAGTTAAAAGACAGACACTTGGAAGTAGACCACACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | GGAGTGCCAGAGACTATATACCCTCTCTCTGTGTCTTaGTTCCTTGGAGGATCCAGAACCCCAAAGATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: GVPETIYPLSVS*FLGGSRTPKIL Trigger: AAGGATCTTTGGGGTTCTGGATCCTCCAAGGAAGCAAGACACAGAGAGAGGGTATATAGTCTCTGGCACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CAGAAAGCTGACATGGGAGTTACTGAGGGTCACACATaGAGCACAGATATACACTACAACAGGGGGACTGGA | + |
|
Preference number: 3 (lower is better) Translates to: QKADMGVTEGHT*STDIHYNRGTG Trigger: TCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGCATGTGTGACCCTCAGTAACTCCCATGTCAGCTTTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTaGGGCTTCTGTCGAATCTCATGGTTGGATCTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: VYPGVKAHDTHN*GFCRISWLDLN Trigger: GTTAAGATCCAACCATGAGATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | CACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTaGAGAAACAAACTTCTCCAGAGAGGCACCTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: HTYCLAPHKEQL*RNKLLQRGTCS Trigger: AGAGCAGGTGCCTCTCTGGAGAAGTTTGTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGATACACATGGCCGTCTCGGGACTTTTAGTGAAGATGCACTTGGCCCAACATCTGGCCCTGCCTCATaGGTGTCTTTCAAATCAATC | + |
|
Preference number: 3 (lower is better) Translates to: KDTHGRLGTFSEDALGPTSGPAS*VSFKSI Trigger: GATTGATTTGAAAGACACCAATGAGGCAGGGCCAGA...TGTTGGGCCAAGTGCATCTTCACTAAAAGTCCCGAGACGGCCATGTGTATCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGGTAGATGTGTGTTTGTaGTCTCAGCATGCCTATTTT | + |
|
Preference number: 3 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQVDVCL*SQHAYF Trigger: AAAATAGGCATGCTGAGACAACAAACACACATCTAC...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TTAACTGCAGTGTGTCTTCTGGGGCGGTACATTCCCTaGGTAGATAACAATGGCTCTGAACTGAGAAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LTAVCLLGRYIP*VDNNGSELRST Trigger: AGTGCTTCTCAGTTCAGAGCCATTGTTATCTACCCAGGGAATGTACCGCCCCAGAAGACACACTGCAGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TGCCAGCTTCCTGAAACAGGGAAAGGGCATGCACTATaGCTAAGAGATCCTGACAACTTCCTTTGGTCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: CQLPETGKGHAL*LRDPDNFLWSD Trigger: ATCTGACCAAAGGAAGTTGTCAGGATCTCTTAGCCATAGTGCATGCCCTTTCCCTGTTTCAGGAAGCTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TCAGCAGAACTTGATGGAGACTCCAGAAAGCTGACATaGGAGTTACTGAGGGTCACACATGCAGCACAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SAELDGDSRKLT*ELLRVTHAAQI Trigger: TATCTGTGCTGCATGTGTGACCCTCAGTAACTCCCATGTCAGCTTTCTGGAGTCTCCATCAAGTTCTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTCTATCTCCCGCCCAGAAGTGCTaGGTGTCACACAATTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: GSRLCFPNGFGCEFQFLSPAQKC*VSHNCL Trigger: AAGACAATTGTGTGACACCAAGCACTTCTGGGCGGG...AGATAGAAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTGGTGTCAGAACCTGTTTTCTGGGTGACTTATCGCAGAGGCAAGAGAAGAGACTTTTTAGATTCTaGGTGAATGTAGTCCTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPGVRTCFLGDLSQRQEKRLFRF*VNVVLG Trigger: CCCAAGGACTACATTCACCAAGAATCTAAAAAGTCT...CTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGGGTGGGCATAGGCAACAGGACAAGTGCTCTAACCTATTGTATGAGTCTTCCTTTGCAGCAATTTTGTaGCATGCCACATTCAACCAA | + |
|
Preference number: 3 (lower is better) Translates to: GGGHRQQDKCSNLLYESSFAAIL*HATFNQ Trigger: TTGGTTGAATGTGGCATGCAACAAAATTGCTGCAAA...GGAAGACTCATACAATAGGTTAGAGCACTTGTCCTGTTGCCTATGCCCACCCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | GCAGAGCGTCTCACGGAAGCCACAGCTCAGAGCAGCTaGTTAGCTGGTGCTACTATTTGTTTTAATTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: AERLTEATAQSS*LAGATICFNFF Trigger: AAAGAAATTAAAACAAATAGTAGCACCAGCTAACCAGCTGCTCTGAGCTGTGGCTTCCGTGAGACGCTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTaGTTGAGCCTGTTCCCAGCCATGGCTGGCTTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: KFLKRKPLALRL*LSLFPAMAGFR Trigger: TCTAAAGCCAGCCATGGCTGGGAACAGGCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TACCTGGGGTGCTATAGGGGTAGGAGGAGTCTGACCTaGAGTATTTGTCACTTTCCATGCTGTAATTGTTAC | + |
|
Preference number: 3 (lower is better) Translates to: YLGCYRGRRSLT*SICHFPCCNCY Trigger: GTAACAATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATAGCACCCCAGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGAGGACACACTTACTGCCTAGCTCCCCATAAAGAACAGCTCTGGAGAAACACTTTTGCAGCAATTTaGTTGCATGCCACATTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: QRGHTYCLAPHKEQLWRNTFAAI*LHATFN Trigger: GTTGAATGTGGCATGCAACAAAATTGCTGCAAAAGT...GTTTCTCCAGAGCTGTTCTTTATGGGGAGCTAGGCAGTAAGTGTGTCCTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCCTGGTGTCAGAACCTGTTTTCTGGGTGACTTATCGCAGAGGCAAGAGAAGGAGAAAGCAATGCCTTaGATTTGTATGGTTTGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: PPGVRTCFLGDLSQRQEKEKAMP*ICMVCL Trigger: CAAACAAACCATACAAATCAAAGGCATTGCTTTCTC...CTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | TCTGATACTTGGCCACCTTTCTATACATTAAAACTCTaGAGCTTTGAGTCAGGCAATACGACCGACCCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SDTWPPFYTLKL*SFESGNTTDPR Trigger: CCGTGGGTCGGTCGTATTGCCTGACTCAAAGCTTCAGAGTTTTAATGTATAGAAAGGTGGCCAAGTATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CCCATGCTGGCCCAACCCAGTGTCCAGATAAAATTCTaGATGACTGTGTCTTGCAGTTTGGAATGTACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: PMLAQPSVQIKF*MTVSCSLECTC Trigger: ACAAGTACATTCCAAACTGCAAGACACAGTCATTCAGAATTTTATCTGGACACTGGGTTGGGCCAGCATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CAGAGGCAAGAGAAGGAAAAAGTCTGCAAGACAGTGTaGCGGGGTCACAAATCTCTACCATCAGAAAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QRQEKEKVCKTV*RGHKSLPSERK Trigger: TTTCCTTTCTGATGGTAGAGATTTGTGACCCCGTCACACTGTCTTGCAGACTTTTTCCTTCTCTTGCCTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CCCCCTCCAACAAGACAGAGGCAGTTAAACAAAGAATaGTGTTTAAACACAGGCCTTACGATGGTTGCTATC | + |
|
Preference number: 3 (lower is better) Translates to: PPPTRQRQLNKE*CLNTGLTMVAI Trigger: GATAGCAACCATCGTAAGGCCTGTGTTTAAACAGCATTCTTTGTTTAACTGCCTCTGTCTTGTTGGAGGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AGGCCAAGGATGGGCAATGGTTGTAGTTTAAGCACCTaGCCTTCAGTTCTGTGTAGGTATTTACACAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: RPRMGNGCSLST*PSVLCRYLHRQ Trigger: TTGTCTGTGTAAATACCTACACAGAACTGAAGGCCAGGTGCTTAAACTACAACCATTGCCCATCCTTGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | ACAGGATCTCCTTGGTGTCAGGGAAGGTATTTGGCTTaGTGTAAAAGCTTCTCTGAGTTTGAACCAAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TGSPWCQGRYLA*CKSFSEFEPKP Trigger: AGGCTTTGGTTCAAACTCAGAGAAGCTTTTACACCAAGCCAAATACCTTCCCTGACACCAAGGAGATCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | TATGGGAAGTTAGACAGTCTTCATGGCTTCAGAGAGTaGTACATTGGCGAATGTTTACCAATACCTGGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: YGKLDSLHGFRE*YIGECLPIPGV Trigger: CACCCCAGGTATTGGTAAACATTCGCCAATGTACCACTCTCTGAAGCCATGAAGACTGTCTAACTTCCCATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | GCTACTGCTGAGTTATGGGAAGTTAGACAGTCTTCATaGCTTCAGAGAGTGGTACATTGGCGAATGTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: ATAELWEVRQSS*LQRVVHWRMFT Trigger: GGTAAACATTCGCCAATGTACCACTCTCTGAAGCCATGAAGACTGTCTAACTTCCCATAACTCAGCAGTAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CCA 72 bp | AGATATACACTACAACAGGGGGACTGGACCACACAGTaGGACAGCAGACAGAGCACTAAATATAGAAAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RYTLQQGDWTTQ*DSRQSTKYRKE Trigger: CTCTTTTCTATATTTAGTGCTCTGTCTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCATATTCTATTGTGGTTGGCAGAGAGTGTTCCCACGGAATGCTCTGGAAACTGTCACACAATTGTCTaGAAACCCCCTGCTGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: YHILLWLAESVPTECSGNCHTIV*KPPAVT Trigger: TGTTACAGCAGGGGGTTTCAAGACAATTGTGTGACA...GTTTCCAGAGCATTCCGTGGGAACACTCTCTGCCAACCACAATAGAATATGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATGTGGATTTTCACAGCTaGCATATTTCTGTGACGACC | + |
|
Preference number: 3 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHVDFHS*HISVTT Trigger: GGTCGTCACAGAAATATGCAAGCTGTGAAAATCCAC...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| 3UTR TCA 72 bp | CAACTGAGACATTTTAGGAACACTTCCACTGGGCACTaGGAAGCAGGAACATCACAGTTAGGAAAAGCTAAC | + |
|
Preference number: 3 (lower is better) Translates to: QLRHFRNTSTGH*EAGTSQLGKAN Trigger: GTTAGCTTTTCCTAACTGTGATGTTCCTGCTTCTCAGTGCCCAGTGGAAGTGTTCCTAAAATGTCTCAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | CTTCTGAAACAGCTTTCAATTTCCTTGTCCTGTATGTaGATGACACGGGATAGCAGATGTCTACCCTGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLKQLSISLSCM*MTRDSRCLPWC Trigger: ACACCAGGGTAGACATCTGCTATCCCGTGTCATTCACATACAGGACAAGGAAATTGAAAGCTGTTTCAGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CAAAGAATGCTGTTTAAACACAGGCCTTACGATGGTTaGTATCACAGGCTGCAAATCTACAAGGAGGCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QRMLFKHRPYDG*YHRLQIYKEAS Trigger: TGAAGCCTCCTTGTAGATTTGCAGCCTGTGATAGCAACCATCGTAAGGCCTGTGTTTAAACAGCATTCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | CTTCAGTTCTGTGTAGGTATTTACACAGACAAGGAGTaGCAGAGACTATATACCCTCTCTCTGTGTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LQFCVGIYTDKE*QRLYTLSLCLA Trigger: AGCAAGACACAGAGAGAGGGTATATAGTCTCTGGCACTCCTTGTCTGTGTAAATACCTACACAGAACTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR-3UTR CAA 90 bp | TATCATATTCTATTGTGGTTGGCAGAGAGTGTTCCCACGGAATGCTCTGGAAACACTTTTGGTGCAAACTaGAGCTCTGATTGGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: YHILLWLAESVPTECSGNTFGAN*SSDWMR Trigger: TCTCATCCAATCAGAGCTCAAGTTTGCACCAAAAGT...GTTTCCAGAGCATTCCGTGGGAACACTCTCTGCCAACCACAATAGAATATGATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR TCA 72 bp | AGAGACCTAATACAAGATATACGACTGTCTTGTCTGTaGCTCCCTGCTCTGTGTTCTCAAAGAAACACTACA | + |
|
Preference number: 3 (lower is better) Translates to: RDLIQDIRLSCL*LPALCSQRNTT Trigger: TGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTATATCTTGTATTAGGTCTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | AATACAAGATATACGACTGTCTTGTCTGTGACTCCCTaGTCTGTGTTCTCAAAGAAACACTACAAAGGGTTA | + |
|
Preference number: 3 (lower is better) Translates to: NTRYTTVLSVTP*SVFSKKHYKGL Trigger: TAACCCTTTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTATATCTTGTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR GCA 72 bp | GAAGCAGTTCATTCTCTTTCAGGTAACCCCCAGTCATaGATAGTTCTTGTACTACCTGTTTGTTGTAGATTA | + |
|
Preference number: 3 (lower is better) Translates to: EAVHSLSGNPQS*IVLVLPVCCRL Trigger: TAATCTACAACAAACAGGTAGTACAAGAACTATGCATGACTGGGGGTTACCTGAAAGAGAATGAACTGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | CACCCACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTaGCTGGGGAGAGCAGGCAGGCTCAAAAACTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HPPGNAVLPAGG*LGRAGRLKNCP Trigger: TGGACAGTTTTTGAGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGTGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTTGCTGGGGAGAGCAGGCAGGCTGGCACCCTTCATCAGTaGAGTCCTATCCTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TRKCCPACRRVAGESRQAGTLHQ*SPILVG Trigger: TCCTACAAGGATAGGACTTCACTGATGAAGGGTGCC...AGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAAATGCTGTCCTGCCTGCCGGAGGGTTGCTGGGGAGAGCAGGCAGGCTATCAGCTCATACTGCTaGGCGAGCTCTTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TRKCCPACRRVAGESRQAISSYC*ASSSSS Trigger: TGATGAGGAAGAGCTCGCCCAGCAGTATGAGCTGAT...AGCCTGCCTGCTCTCCCCAGCAACCCTCCGGCAGGCAGGACAGCATTTCCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCAAGAAAAGGGCCCACTaGAAACGGCCGTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GTVKSESDRTGRGELPASKKRAH*KRPWPH Trigger: GTGTGGCCACGGCCGTTTCCAGTGGGCCCTTTTCTT...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCGGTCTGTCTCTGCACTaGGTAGCACGAAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVKSESDRTGRGELPASGLSLH*VARSPP Trigger: TGGTGGGCTTCGTGCTACCCAGTGCAGAGACAGACC...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCCGTGAAGACCTTCTCTaGCTGGCCCCGGGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVREDLL*LAPGSH Trigger: ATGAGAGCCCGGGGCCAGCCAGAGAAGGTCTTCACG...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCACATGCAGAGCCAACTaGGGTGCTCACCCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVTCRAN*GAHPAS Trigger: AGAAGCGGGGTGAGCACCTCAGTTGGCTCTGCATGT...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGCTGACTCTAGCTCTCTaGGGTCCTTGTACTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQLTLAL*GPCTHH Trigger: GTGATGAGTACAAGGACCGCAGAGAGCTAGAGTCAG...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | AACAGTGGACAGTTGATCAAAGGAGGGTGGGTGGTGTaGACCCGCAAGGGACCGTACAAGAGAGGCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NSGQLIKGGWVV*TRKGPYKRGSR Trigger: ACGGGAGCCTCTCTTGTACGGTCCCTTGCGGGTCAACACCACCCACCCTCCTTTGATCAACTGTCCACTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCACAGGAAGAAGCAACTaGTCCCGGAGAGCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVTGRSN*SRRAPW Trigger: CCATGGTGCTCTCCGGGATCAGTTGCTTCTTCCTGT...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCCTGGGCCCGATCCACTaGCTGGTTCACCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYPGVKAHDTHNWGFCRILGPIH*LVHLLH Trigger: GTGAAGAAGGTGAACCAGGCAGTGGATCGGGCCCAG...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCAAGACCTTCTCTGGCTaGCCCCGGGCTCTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VYPGVKAHDTHNWGFCRIKTFSG*PRALML Trigger: CAACATGAGAGCCCGGGGCCAGCCAGAGAAGGTCTT...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATCCACGCCATCGGCCATaGGAGCCATGCCCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHPRHRP*EPCPGR Trigger: TCGTCCTGGGCATGGCTCTCATGGCCGATGGCGTGG...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCCCTTCCTACTTTGTCTaGCAGTCCTCCCCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVPSYFV*QSSPEE Trigger: TTCTTCTGGGGAGGACTGGCAGACAAAGTAGGAAGG...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCTCATGGATTCGCTGGTaGCAAACCACAGGAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVSWIRW*QTTGRS Trigger: GCTTCTTCCTGTGGTTTGGCACCAGCGAATCCATGA...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGGCATGCCTATCATCATaGATTCGCTGGTGCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQACLSS*IRWCQT Trigger: GGTTTGGCACCAGCGAATCCATGATGATAGGCATGC...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | GGTGGGCATAGGCAACAGGACAAGTGCTCTAACCTATaGTATGAGTCTTCCCAAGCCAACTCCCACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GGHRQQDKCSNL*YESSQANSHPP Trigger: AGGAGGGTGGGAGTTGGCTTGGGAAGACTCATACAATAGGTTAGAGCACTTGTCCTGTTGCCTATGCCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCCCACGCCATCGGCCATaGGAGCCATGCCCAGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: AFQKFLKRKPLALRLWLSPRHRP*EPCPGR Trigger: TCGTCCTGGGCATGGCTCTCATGGCCGATGGCGTGG...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTCTATCTCAGAGCCAACTGAGGTaGTCACCCCGCTTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSRLCFPNGFGCEFQFLSQSQLR*SPRFSR Trigger: CCGGGAGAAGCGGGGTGAGCACCTCAGTTGGCTCTG...AGATAGAAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GTCTACCCTGGTGTCAAGGCCCATGACACTCATAACTGGGGCTTCTGTCGAATCCCGTGGCCACACTCTTaGATTATCAGCTCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VYPGVKAHDTHNWGFCRIPWPHS*IISSYC Trigger: GCAGTATGAGCTGATAATCCAAGAGTGTGGCCACGG...GATTCGACAGAAGCCCCAGTTATGAGTGTCATGGGCCTTGACACCAGGGTAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCTGGTGTCAGAACCTGTTTTCTGGGTGACTTATCGCAGAGGCAAGAGAAGAGAACACAGTGGGAATaGCGCCTCCAATCCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: PPGVRTCFLGDLSQRQEKRTQWE*RLQSRI Trigger: GATTCGGGATTGGAGGCGCCATTCCCACTGTGTTCT...CTTCTCTTGCCTCTGCGATAAGTCACCCAGAAAACAGGTTCTGACACCAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCTCCCCTGGTTCGTGCTaGGGATGCCCTGGTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: AFQKFLKRKPLALRLWLSSPGSC*GCPGTP Trigger: GGGAGTACCAGGGCATCCCCAGCACGAACCAGGGGA...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | GGTTACTTCAGGGCACTCCACTGTGTAGATGTGTGTTaGTTGTCTCAGCATGCCTATTTTGGGGGTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYFRALHCVDVC*LSQHAYFGGEG Trigger: CCCCTCACCCCCAAAATAGGCATGCTGAGACAACAAACACACATCTACACAGTGGAGTGCCCTGAAGTAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAATCATCCTCCTCGTCGTaGCCCTCAGTGGCCTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YDCLVCDSLLCVLKETLQSSSSS*PSVASL Trigger: AAGTGAGGCCACTGAGGGTCACGACGAGGAGGATGA...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCACAGATATACACTACAACAGGGGGACTGGACCACACAGTGGGACAGCAGAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAQIYTTTGGLDHTVGQQRQRIR*QTCKSE Trigger: TTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCT...CTGCTGTCCCACTGTGTGGTCCAGTCCCCCTGTTGTAGTGTATATCTGTGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAACTTTCCCCTGGTTCGTaGTGGGGATGCCCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YDCLVCDSLLCVLKETLQLSPGS*WGCPGT Trigger: AGTACCAGGGCATCCCCAGCACGAACCAGGGGAAAG...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATATGCTGTCTTTCCCCTaGTTCGTGCTGGGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHMLSFP*FVLGMP Trigger: GGGCATCCCCAGCACGAACCAGGGGAAAGACAGCAT...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTCACACACGAGCACAGTaGAAGCCAGCAGGATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KRGSRLCFPNGFGCEFQFHTRAQ*KPAGWG Trigger: TCCCCATCCTGCTGGCTTCCACTGTGCTCGTGTGTG...AAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCCTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTCTATCTGTGGAACTGGTAGGCTaGACCCATGCTGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GSRLCFPNGFGCEFQFLSVELVG*THAEAP Trigger: TGGAGCTTCAGCATGGGTTCAGCCTACCAGTTCCAC...AGATAGAAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATGTGGAACTGGTAGGCTaGACCCATGCTGAAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHVELVG*THAEAP Trigger: TGGAGCTTCAGCATGGGTTCAGCCTACCAGTTCCAC...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATTGGCGGAGGCGTAGATaGCGCCAATCATCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHWRRRR*RQSSRT Trigger: TGTTCTGGATGATTGGCGGCATCTACGCCTCCGCCA...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAACAGAGCCAACTGAGGTaGTCACCCCGCTTCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEQSQLR*SPRFSR Trigger: CCGGGAGAAGCGGGGTGAGCACCTCAGTTGGCTCTG...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCTGGCGGAGGCGTAGATaGCGCCAATCATCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: AFQKFLKRKPLALRLWLSWRRRR*RQSSRT Trigger: TGTTCTGGATGATTGGCGGCATCTACGCCTCCGCCA...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGGCCCGATCCACTGCCTaGTTCACCTTCTTCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLARSTA*FTFFTV Trigger: GACGGTGAAGAAGGTGAACCAGGCAGTGGATCGGGC...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGATGCTGTCTTTCCCCTaGTTCGTGCTGGGGATGCCC | + |
|
Preference number: 4 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLMLSFP*FVLGMP Trigger: GGGCATCCCCAGCACGAACCAGGGGAAAGACAGCAT...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAGTAGGAGAACACAGTaGGAATGGCGCCTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHSRRTQ*EWRLQS Trigger: GGATTGGAGGCGCCATTCCCACTGTGTTCTCCTACT...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR TCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATGGCACCCTTCATCAGTaGAGTCCTATCCTTGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHGTLHQ*SPILVG Trigger: TCCTACAAGGATAGGACTTCACTGATGAAGGGTGCC...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR TCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAACTCAGTGGCCTCACTTaGGCCTTCATCATCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YDCLVCDSLLCVLKETLQLSGLT*AFIIID Trigger: GTCAATGATGATGAAGGCTCAAGTGAGGCCACTGAG...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTGTAGGTTTCGCCAGGTaGGTAGTAGTCATCATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KRGSRLCFPNGFGCEFQFVGFAR*VVVIIV Trigger: GACGATGATGACTACTACCCACCTGGCGAAACCTAC...AAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCCTCTCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGAGAGTACGTCGTGACCCTCAGTaGCCTCACTTGAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AVWNVLVAKSGSRDNLRVRRDPQ*PHLSLH Trigger: ATGAAGGCTCAAGTGAGGCCACTGAGGGTCACGACG...TACTCTCAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCTCCCCTGGTTCGTGCTaGGGATGCCCTGGTACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFSPGSC*GCPGTP Trigger: GGGAGTACCAGGGCATCCCCAGCACGAACCAGGGGA...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCAGTAGGAGAACACAGTaGGAATGGCGCCTCCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFQKFLKRKPLALRLWLSSRRTQ*EWRLQS Trigger: GGATTGGAGGCGCCATTCCCACTGTGTTCTCCTACT...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTCGTGAAGACCTTCTCTaGCTGGCCCCGGGCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAFLIRYKQTLQVHKLESREDLL*LAPGSH Trigger: ATGAGAGCCCGGGGCCAGCCAGAGAAGGTCTTCACG...ACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| 3UTR CAA 72 bp | CAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATaGTGGTTGAGCCTGTTCCCAGCCATGGCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QKFLKRKPLALR*WLSLFPAMAGF Trigger: AAAGCCAGCCATGGCTGGGAACAGGCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTACATGCAGAGCCAACTaGGGTGCTCACCCCGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAFLIRYKQTLQVHKLESTCRAN*GAHPAS Trigger: AGAAGCGGGGTGAGCACCTCAGTTGGCTCTGCATGT...ACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATATTATCAGCTCATACTaGTGGGCGAGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHIISSY*WASSSS Trigger: TGAGGAAGAGCTCGCCCAGCAGTATGAGCTGATAAT...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATCTTTGGCAATGTCCTTaGCACCCTTCATCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHLWQCP*HPSSVK Trigger: CTTCACTGATGAAGGGTGCCAAGGACATTGCCAAAG...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAGCCCGATCCACTGCCTaGTTCACCTTCTTCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEARSTA*FTFFTV Trigger: GACGGTGAAGAAGGTGAACCAGGCAGTGGATCGGGC...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAAGAAAAGGGCCCACTaGAAACGGCCGTGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEKKRAH*KRPWPH Trigger: GTGTGGCCACGGCCGTTTCCAGTGGGCCCTTTTCTT...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAGGTCTGTCTCTGCACTaGGTAGCACGAAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEGLSLH*VARSPP Trigger: TGGTGGGCTTCGTGCTACCCAGTGCAGAGACAGACC...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | TACGACTGTCTTGTCTGTGACTCCCTGCTCTGTGTTCTCAAAGAAACACTACAATCATCATGGATTCGCTaGTGCCAAACCACAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YDCLVCDSLLCVLKETLQSSWIR*CQTTGR Trigger: TCTTCCTGTGGTTTGGCACCAGCGAATCCATGATGA...TTGTAGTGTTTCTTTGAGAACACAGAGCAGGGAGTCACAGACAAGACAGTCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGCTGGGCCCGATCCACTaGCTGGTTCACCTTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLLGPIH*LVHLLH Trigger: GTGAAGAAGGTGAACCAGGCAGTGGATCGGGCCCAG...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGCTTTCCCCTGGTTCGTaGTGGGGATGCCCTGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLLSPGS*WGCPGT Trigger: AGTACCAGGGCATCCCCAGCACGAACCAGGGGAAAG...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | TCAGCACAAAATTATGCCAATTTAAACTTCCTGTTAGTAGAGCGTCGCCAGCAGATTATCAGCTCATACTaGTGGGCGAGCTCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SAQNYANLNFLLVERRQQIISSY*WASSSS Trigger: TGAGGAAGAGCTCGCCCAGCAGTATGAGCTGATAAT...CTGCTGGCGACGCTCTACTAACAGGAAGTTTAAATTGGCATAATTTTGTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCACAAAATTATGCCAATTTAAACTTCCTGTTAGTAGAGCGTCGCCAGCAGCTTTGGCAATGTCCTTaGCACCCTTCATCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAQNYANLNFLLVERRQQLWQCP*HPSSVK Trigger: CTTCACTGATGAAGGGTGCCAAGGACATTGCCAAAG...CTGCTGGCGACGCTCTACTAACAGGAAGTTTAAATTGGCATAATTTTGTGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTCGTCGTGACCCTCAGTaGCCTCACTTGAGCCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GAFLIRYKQTLQVHKLESRRDPQ*PHLSLH Trigger: ATGAAGGCTCAAGTGAGGCCACTGAGGGTCACGACG...ACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCAAGACCTTCTCTGGCTaGCCCCGGGCTCTCATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFKTFSG*PRALML Trigger: CAACATGAGAGCCCGGGGCCAGCCAGAGAAGGTCTT...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| 3UTR CAA 72 bp | AGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATaGGTGTCTTTCAAATCAATCAATGATGCTTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RNRSEFCSGPAS*VSFKSINDASK Trigger: CTTCGAAGCATCATTGATTGATTTGAAAGACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCACAGGAAGAAGCAACTaGTCCCGGAGAGCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFTGRSN*SRRAPW Trigger: CCATGGTGCTCTCCGGGATCAGTTGCTTCTTCCTGT...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATATTTCCTGGCAACACTaGCAATGTCCCAAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YRGRRSLTWSICHFPCCNISWQH*QCPKKV Trigger: AACTTTCTTGGGACATTGGCAGTGTTGCCAGGAAAT...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATATTTCCTGGCAACACTaGCAATGTCCCAAGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHISWQH*QCPKKV Trigger: AACTTTCTTGGGACATTGGCAGTGTTGCCAGGAAAT...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTCAAAAATTTCTGAAACGTAAGCCACTGGCTCTAAGATTGTGGTTGAGCCCCGGGCTCTCATGTTaGTGTCATGAATTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AFQKFLKRKPLALRLWLSPGLSC*CHELTS Trigger: TGAAGTTAATTCATGACACCAACATGAGAGCCCGGG...GCTCAACCACAATCTTAGAGCCAGTGGCTTACGTTTCAGAAATTTTTGAAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATTATTCCATTCCAGTGTaGATCTGGTTCTCCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: YRGRRSLTWSICHFPCCNYSIPV*IWFSMV Trigger: TACCATGGAGAACCAGATCCACACTGGAATGGAATA...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | GTCTATTTCTTACACCAGCACAGACTTTTTAGATTCTaGGTGAATGTAGTCCTTGGGGAAGCCTGGTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VYFLHQHRLFRF*VNVVLGEAWST Trigger: AGTTGACCAGGCTTCCCCAAGGACTACATTCACCAAGAATCTAAAAAGTCTGTGCTGGTGTAAGAAATAGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | AGTCTTCCCAAGCCAACTCCCACCCTCCTTAGAGACTaGCTTATTCTCTTGGAGAATAAAATAGAACCATTC | + |
|
Preference number: 4 (lower is better) Translates to: SLPKPTPTLLRD*LILLENKIEPF Trigger: GAATGGTTCTATTTTATTCTCCAAGAGAATAAGCAAGTCTCTAAGGAGGGTGGGAGTTGGCTTGGGAAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | GTGGATGAGCTCAGCATAATGTCACTGACCCTGTCATaGGGACACCATTATTACAGTACTTCCAAAATAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VDELSIMSLTLS*GHHYYSTSKIE Trigger: CTCTATTTTGGAAGTACTGTAATAATGGTGTCCCAATGACAGGGTCAGTGACATTATGCTGAGCTCATCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAACTCAGTGGCCTCACTTaGGCCTTCATCATCATTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLELSGLT*AFIIID Trigger: GTCAATGATGATGAAGGCTCAAGTGAGGCCACTGAG...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGATCCCGAATTTGGTATaGATAGGTCTGTCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLIPNLV*IGLSLH Trigger: GTGCAGAGACAGACCTATGCATACCAAATTCGGGAT...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | TATCATATTCTATTGTGGTTGGCAGAGAGTGTTCCCACGGAATGCTCTGGAAACCAAATCAGAAGAGACTaGTTCCTTCCTACTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YHILLWLAESVPTECSGNQIRRD*FLPTLS Trigger: AGACAAAGTAGGAAGGAAGCAGTCTCTTCTGATTTG...GTTTCCAGAGCATTCCGTGGGAACACTCTCTGCCAACCACAATAGAATATGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAATCAGCTCATACTGCTaGGCGAGCTCTTCCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEISSYC*ASSSSS Trigger: TGATGAGGAAGAGCTCGCCCAGCAGTATGAGCTGAT...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAACCGTGGCCACACTCTTaGATTATCAGCTCATACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEPWPHS*IISSYC Trigger: GCAGTATGAGCTGATAATCCAAGAGTGTGGCCACGG...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCAGAACACAGTGGGAATaGCGCCTCCAATCCCGAATC | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFRTQWE*RLQSRI Trigger: GATTCGGGATTGGAGGCGCCATTCCCACTGTGTTCT...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTTGCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGGCAGGACTTAAACACTaGATCTTTGAAGGTTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: CLAVWNVLVAKSGSRDNLAGLKH*IFEGYR Trigger: TCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTGC...CAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGCAAGACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCCCTTCCTACTTTGTCTaGCAGTCCTCCCCAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFPSYFV*QSSPEE Trigger: TTCTTCTGGGGAGGACTGGCAGACAAAGTAGGAAGG...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTCATGGATTCGCTGGTaGCAAACCACAGGAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLSWIRW*QTTGRS Trigger: GCTTCTTCCTGTGGTTTGGCACCAGCGAATCCATGA...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCGCATGCCTATCATCATaGATTCGCTGGTGCCAAACC | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFACLSS*IRWCQT Trigger: GGTTTGGCACCAGCGAATCCATGATGATAGGCATGC...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAACCCGGGCTCTCATGTTaGTGTCATGAATTAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEPGLSC*CHELTS Trigger: TGAAGTTAATTCATGACACCAACATGAGAGCCCGGG...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCTCATCATGGATTCGCTaGTGCCAAACCACAGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IRYKQTLQVHKLESLWIFSSWIR*CQTTGR Trigger: TCTTCCTGTGGTTTGGCACCAGCGAATCCATGATGA...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAFLIRYKQTLQVHKLESRQRIR*QTCKSE Trigger: TTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCT...ACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR TCA 90 bp | GGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTGCAGGACTTAAACACTaGATCTTTGAAGGTTACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAFLIRYKQTLQVHKLESAGLKH*IFEGYR Trigger: TCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTGC...ACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGATCCCGAATTTGGTATaGATAGGTCTGTCTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLIPNLV*IGLSLH Trigger: GTGCAGAGACAGACCTATGCATACCAAATTCGGGAT...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTTTGGAATGTACTTGTAGCTAAATCAGGGAGCAGAGACAATTTGAGAGTAGCATACTCATCAGACTaGAGATGTTTAATGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AVWNVLVAKSGSRDNLRVAYSSD*RCLMTS Trigger: TGATGTCATTAAACATCTCCAGTCTGATGAGTATGC...TACTCTCAAATTGTCTCTGCTCCCTGATTTAGCTACAAGTACATTCCAAACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| 3UTR CAA 72 bp | ACAGCAGGCCAGAGTAGAGAAAGCAATGCCTTTGATTaGTATGGTTTGTTTGCTTGTTTGTTTGTTTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQSRESNAFD*YGLFACLFVCL Trigger: CAAACAAACAAACAAACAAGCAAACAAACCATACAAATCAAAGGCATTGCTTTCTCTACTCTGGCCTGCTGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTATTCCATTCCAGTGTaGATCTGGTTCTCCATGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLYSIPV*IWFSMV Trigger: TACCATGGAGAACCAGATCCACACTGGAATGGAATA...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR GCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGCAAATCAGAAGAGACTaGTTCCTTCCTACTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLQIRRD*FLPTLS Trigger: AGACAAAGTAGGAAGGAAGCAGTCTCTTCTGATTTG...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGGCATACTCATCAGACTaGAGATGTTTAATGACATCA | + |
|
Preference number: 4 (lower is better) Translates to: AFLIRYKQTLQVHKLESLAYSSD*RCLMTS Trigger: TGATGTCATTAAACATCTCCAGTCTGATGAGTATGC...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | CAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGGAGGATGGGGATGGCTTaGGTGATGCTGACCAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QSSEHQGAAQGQDLLGVRRMGMA*VMLTKE Trigger: CTCCTTGGTCAGCATCACCAAAGCCATCCCCATCCT...CCTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS CCA 90 bp | CCCGCTTCTCCCGGGCCAGGACTTCAGCGAAGTAGGAGAACACAGTaGGAATGGCGCCTCCAATCCCGAATCCAGAAAGCAACCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: PASPGPGLQRSRRTQ*EWRLQSRIQKATDR Trigger: TCTGTCGGTTGCTTTCTGGATTCGGGATTGGAGGCGCCATTCCCACTGTGTTCTCCTACTTCGCTGAAGTCCTGGCCCGGGAGAAGCGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS GCA 90 bp | TGCGGTCCTTGTACTCATCACCTTTGGGCTGTCCTACAGACACGATaGTGTCTTTCCCCTGGTTCGTGCTGGGGATGCCCTGGTACTCCC | + |
|
Preference number: 5 (lower is better) Translates to: CGPCTHHLWAVLQTR*CLSPGSCWGCPGTP Trigger: GGGAGTACCAGGGCATCCCCAGCACGAACCAGGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 90 bp | AGAGCCATGCCCAGGACGAAGAAAAGGGCCCACTGGAAACGGCCGTaGCCACACTCTTGGATTATCAGCTCATACTGCTGGGCGAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RAMPRTKKRAHWKRP*PHSWIISSYCWASS Trigger: AGAGCTCGCCCAGCAGTATGAGCTGATAATCCAAGAGTGTGGCCACGGCCGTTTCCAGTGGGCCCTTTTCTTCGTCCTGGGCATGGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGTTGTACTCATCACCTTaGGGCTGTCCTACAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQLYSSP*GCPTDT Trigger: CGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAA...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CAA 90 bp | GGGACAGTCAAGAGTGAAAGCGACAGAACAGGACGTGGAGAGCTGCCAGCTTCCGCCGTGGCCACACTCTaGGATTATCAGCTCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: GTVKSESDRTGRGELPASAVATL*DYQLIL Trigger: CAGTATGAGCTGATAATCCAAGAGTGTGGCCACGGC...GGAAGCTGGCAGCTCTCCACGTCCTGTTCTGTCGCTTTCACTCTTGACTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS TCA 90 bp | CCTCGTCGTGACCCTCAGTGGCCTCACTTGAGCCTTCATCATCATTaGCCTCCCCACTGTAGGTTTCGCCAGGTGGGTAGTAGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRDPQWPHLSLHHH*PPHCRFRQVGSSHH Trigger: ATGATGACTACTACCCACCTGGCGAAACCTACAGTGGGGAGGTCAATGATGATGAAGGCTCAAGTGAGGCCACTGAGGGTCACGACGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 90 bp | TCCTCTCTGACTCTAGCTCTCTGCGGTCCTTGTACTCATCACCTTTaGGCTGTCCTACAGACACGATGCTGTCTTTCCCCTGGTTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSLTLALCGPCTHHL*AVLQTRCCLSPGSC Trigger: GCACGAACCAGGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCAGAGAGCTAGAGTCAGAGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTCCTCAGAGCACCAGGGCGCTGCTCAGGGACAGGATCTCCTTGGTGTCAGATCCAGATCCCGAATTaGGTATGCATAGGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVLRAPGRCSGTGSPWCQIQIPN*VCIGLS Trigger: AGACAGACCTATGCATACCAAATTCGGGATCTGGAT...CTGACACCAAGGAGATCCTGTCCCTGAGCAGCGCCCTGGTGCTCTGAGGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CAA 90 bp | GGCAAGGCAGAGGGGACTCCAGGGAGCAGGGCCATCTCTGAACAGATTCTTGGGCAGACAATCGTAAGCTaGATGGTGTTTTCCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: GKAEGTPGSRAISEQILGQTIVS*MVFSLT Trigger: AGTCAGGGAAAACACCATCAAGCTTACGATTGTCTG...CCCAAGAATCTGTTCAGAGATGGCCCTGCTCCCTGGAGTCCCCTCTGCCTTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGATGAGAAACAGAAGCGAGTTCTGTTCTGGCCCTGCCTCATTGGTGTCTCTTTGGCAATGTCCTaGGCACCCTTCATCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: PRDEKQKRVLFWPCLIGVSLAMS*APFISE Trigger: TTCACTGATGAAGGGTGCCAAGGACATTGCCAAAGA...GACACCAATGAGGCAGGGCCAGAACAGAACTCGCTTCTGTTTCTCATCCCTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS GCA 90 bp | AGGAAGGCAAAGAATCCGTTGACAGACATGCAAATCAGAAGAGACTaGTTCCTTCCTACTTTGTCTGCCAGTCCTCCCCAGAAGAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKAKNPLTDMQIRRD*FLPTLSASPPQKNA Trigger: GGCGTTCTTCTGGGGAGGACTGGCAGACAAAGTAGGAAGGAAGCAGTCTCTTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS TCA 90 bp | AGAAAGCAACCGACAGACGAGAAAGAAGCCGTAACCTTGGACAAATaGGGAGAGGAAGGCAAAGAATCCGTTGACAGACATGCAAATCAG | + |
|
Preference number: 5 (lower is better) Translates to: RKQPTDEKEAVTLDK*GEEGKESVDRHANQ Trigger: CTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCTCTCCTCATTTGTCCAAGGTTACGGCTTCTTTCTCGTCTGTCGGTTGCTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGCCTGCTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATTTGTACTCATCACCTTaGGGCTGTCCTACAGACACG | + |
|
Preference number: 5 (lower is better) Translates to: ERLLGAFLIRYKQTLQVHLYSSP*GCPTDT Trigger: CGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAA...ATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAGCAGGCGCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS TCA 90 bp | AGCCGTAACCTTGGACAAATGAGGAGAGGAAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAAGAGACTGCTTCCTTCCTACTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRNLGQMRRGRQRIR*QTCKSEETASFLLC Trigger: ACAAAGTAGGAAGGAAGCAGTCTCTTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCTCTCCTCATTTGTCCAAGGTTACGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 90 bp | ACTCCGAGGAATCTGCCGTTCTCGTATTCCATTCCAGTGTGGATCTaGTTCTCCATGGTAAAGTTAATGCTGAAGTTTGCATATTTATCC | + |
|
Preference number: 5 (lower is better) Translates to: TPRNLPFSYSIPVWI*FSMVKLMLKFAYLS Trigger: GGATAAATATGCAAACTTCAGCATTAACTTTACCATGGAGAACCAGATCCACACTGGAATGGAATACGAGAACGGCAGATTCCTCGGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 90 bp | AACTTGACTCCGAGGAATCTGCCGTTCTCGTATTCCATTCCAGTGTaGATCTGGTTCTCCATGGTAAAGTTAATGCTGAAGTTTGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: NLTPRNLPFSYSIPV*IWFSMVKLMLKFAY Trigger: ATATGCAAACTTCAGCATTAACTTTACCATGGAGAACCAGATCCACACTGGAATGGAATACGAGAACGGCAGATTCCTCGGAGTCAAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | TATAGGGGTAGGAGGAGTCTGACCTGGAGTATTTGTCACTTTCCATGCTGTAATAAGGCAAAGAATCCGTaGACAGACATGCAAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: YRGRRSLTWSICHFPCCNKAKNP*TDMQIR Trigger: TCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTT...ATTACAGCATGGAAAGTGACAAATACTCCAGGTCAGACTCCTCCTACCCCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAATCTTTGGCAATGTCCTaGGCACCCTTCATCAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGAFLIRYKQTLQVHKLESLAMS*APFISE Trigger: TTCACTGATGAAGGGTGCCAAGGACATTGCCAAAGA...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCGTCTGTGTTTCCCAAATGGCTTTGGTTGTGAATTCCAATTTCTATCTGATCAGCTCATCTATTaGTTTGGGAGTCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: GSRLCFPNGFGCEFQFLSDQLIY*FGSLDF Trigger: AAAATCAAGACTCCCAAACAAATAGATGAGCTGATC...AGATAGAAATTGGAATTCACAACCAAAGCCATTTGGGAAACACAGACGGGAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS-3UTR CAA 90 bp | CTAGGAGCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAACAGACAATCGTAAGCTaGATGGTGTTTTCCCTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LGAFLIRYKQTLQVHKLEQTIVS*MVFSLT Trigger: AGTCAGGGAAAACACCATCAAGCTTACGATTGTCTG...TTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGCTCCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCATCCAGATCCCGAATTaGGTATGCATAGGTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRYKQTLQVHKLESLWIFIQIPN*VCIGLS Trigger: AGACAGACCTATGCATACCAAATTCGGGATCTGGAT...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | ATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGTGGATTTTCAAGGCAAAGAATCCGTaGACAGACATGCAAATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRYKQTLQVHKLESLWIFKAKNP*TDMQIR Trigger: TCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTT...GAAAATCCACAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS-3UTR CAA 90 bp | GCCTTTTTAATAAGATACAAGCAAACCCTCCAAGTTCATAAGCTAGAAAGTTTGGATCAGCTCATCTATTaGTTTGGGAGTCTTGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: AFLIRYKQTLQVHKLESLDQLIY*FGSLDF Trigger: AAAATCAAGACTCCCAAACAAATAGATGAGCTGATC...CAAACTTTCTAGCTTATGAACTTGGAGGGTTTGCTTGTATCTTATTAAAAAGGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182289.2 |
||
| CDS GCA 72 bp | CGCTTTACAGAGGGCGTTCAAGAAGCCGAAGCCCGTTaGTCTCCGGTCTGTGGGATACAGTTCCACCGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: RFTEGVQEAEAR*SPVCGIQFHRD Trigger: GTCACGGTGGAACTGTATCCCACAGACCGGAGAGCAACGGGCTTCGGCTTCTTGAACGCCCTCTGTAAAGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161263.8 |
||
| CDS CCA 72 bp | CCCGGGCCAGGACTTCAGCGAAGTAGGAGAACACAGTaGGAATGGCGCCTCCAATCCCGAATCCAGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PGPGLQRSRRTQ*EWRLQSRIQKA Trigger: TGCTTTCTGGATTCGGGATTGGAGGCGCCATTCCCACTGTGTTCTCCTACTTCGCTGAAGTCCTGGCCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS TCA 72 bp | TGGATTCGCTGGTGCCAAACCACAGGAAGAAGCAACTaGTCCCGGAGAGCACCATGGAGCCTCCTAGCATCG | + |
|
Preference number: 6 (lower is better) Translates to: WIRWCQTTGRSN*SRRAPWSLLAS Trigger: CGATGCTAGGAGGCTCCATGGTGCTCTCCGGGATCAGTTGCTTCTTCCTGTGGTTTGGCACCAGCGAATCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 72 bp | CCCAGGACGAAGAAAAGGGCCCACTGGAAACGGCCGTaGCCACACTCTTGGATTATCAGCTCATACTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PRTKKRAHWKRP*PHSWIISSYCW Trigger: CCAGCAGTATGAGCTGATAATCCAAGAGTGTGGCCACGGCCGTTTCCAGTGGGCCCTTTTCTTCGTCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS TCA 72 bp | GACCCTCAGTGGCCTCACTTGAGCCTTCATCATCATTaGCCTCCCCACTGTAGGTTTCGCCAGGTGGGTAGT | + |
|
Preference number: 6 (lower is better) Translates to: DPQWPHLSLHHH*PPHCRFRQVGS Trigger: ACTACCCACCTGGCGAAACCTACAGTGGGGAGGTCAATGATGATGAAGGCTCAAGTGAGGCCACTGAGGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS TCA 72 bp | CTCATCCTCCTCGTCGTGACCCTCAGTGGCCTCACTTaGGCCTTCATCATCATTGACCTCCCCACTGTAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LILLVVTLSGLT*AFIIIDLPTVG Trigger: ACCTACAGTGGGGAGGTCAATGATGATGAAGGCTCAAGTGAGGCCACTGAGGGTCACGACGAGGAGGATGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS GCA 72 bp | TGTACTCATCACCTTTGGGCTGTCCTACAGACACGATaGTGTCTTTCCCCTGGTTCGTGCTGGGGATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CTHHLWAVLQTR*CLSPGSCWGCP Trigger: AGGGCATCCCCAGCACGAACCAGGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 72 bp | CCAGGACTTCAGCGAAGTAGGAGAACACAGTGGGAATaGCGCCTCCAATCCCGAATCCAGAAAGCAACCGAC | + |
|
Preference number: 6 (lower is better) Translates to: PGLQRSRRTQWE*RLQSRIQKATD Trigger: GTCGGTTGCTTTCTGGATTCGGGATTGGAGGCGCCATTCCCACTGTGTTCTCCTACTTCGCTGAAGTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 72 bp | ATGTTTTCCCACCTCCAGCAAGAACCGAGGGCTTTCTaGCATGAAGGTGAGAGCCACCACAGAGGAGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: MFSHLQQEPRAF*HEGESHHRGDA Trigger: TGCGTCTCCTCTGTGGTGGCTCTCACCTTCATGCCAGAAAGCCCTCGGTTCTTGCTGGAGGTGGGAAAACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CAA 90 bp | CTCCTCTCTGACTCTAGCTCTCTGCGGTCCTTGTACTCATCACCTTaGGGCTGTCCTACAGACACGATGCTGTCTTTCCCCTGGTTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLSDSSSLRSLYSSP*GCPTDTMLSFPWFV Trigger: CACGAACCAGGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCAGAGAGCTAGAGTCAGAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CAA 72 bp | GACTCTAGCTCTCTGCGGTCCTTGTACTCATCACCTTaGGGCTGTCCTACAGACACGATGCTGTCTTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: DSSSLRSLYSSP*GCPTDTMLSFP Trigger: GGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCAGAGAGCTAGAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CAA 90 bp | TCTTCCTCATCAGCCCTCCTCTCTGACTCTAGCTCTCTGCGGTCCTaGTACTCATCACCTTTGGGCTGTCCTACAGACACGATGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSALLSDSSSLRS*YSSPLGCPTDTMLS Trigger: AGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCAGAGAGCTAGAGTCAGAGAGGAGGGCTGATGAGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS TCA 72 bp | CAGTTCCACCGTGACGACATCGAGAGAATTCCACGCTaGGATGGTCAGCCCATTATACAAGCACAGCATGCC | + |
|
Preference number: 6 (lower is better) Translates to: QFHRDDIERIPR*DGQPIIQAQHA Trigger: GGCATGCTGTGCTTGTATAATGGGCTGACCATCTCAGCGTGGAATTCTCTCGATGTCGTCACGGTGGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
||
| CDS CCA 72 bp | ACTCTAGCTCTCTGCGGTCCTTGTACTCATCACCTTTaGGCTGTCCTACAGACACGATGCTGTCTTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: TLALCGPCTHHL*AVLQTRCCLSP Trigger: AGGGGAAAGACAGCATCGTGTCTGTAGGACAGCCCAAAGGTGATGAGTACAAGGACCGCAGAGAGCTAGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS GCA 72 bp | CTATGCTACCTAGCCATCCAGATCCCGAATTTGGTATaGATAGGTCTGTCTCTGCACTGGGTAGCACGAAGC | + |
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Preference number: 6 (lower is better) Translates to: LCYLAIQIPNLV*IGLSLHWVARS Trigger: GCTTCGTGCTACCCAGTGCAGAGACAGACCTATGCATACCAAATTCGGGATCTGGATGGCTAGGTAGCATAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CCA 72 bp | ATCATCATTGACCTCCCCACTGTAGGTTTCGCCAGGTaGGTAGTAGTCATCATCGTCCTCTTCATCCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: IIIDLPTVGFAR*VVVIIVLFILE Trigger: TTCCAGGATGAAGAGGACGATGATGACTACTACCCACCTGGCGAAACCTACAGTGGGGAGGTCAATGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 72 bp | GGTACACTATGCTACCTAGCCATCCAGATCCCGAATTaGGTATGCATAGGTCTGTCTCTGCACTGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: GTLCYLAIQIPN*VCIGLSLHWVA Trigger: TGCTACCCAGTGCAGAGACAGACCTATGCATACCAAATTCGGGATCTGGATGGCTAGGTAGCATAGTGTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS TCA 72 bp | CCGACAGACGAGAAAGAAGCCGTAACCTTGGACAAATaGGGAGAGGAAGGCAAAGAATCCGTTGACAGACAT | + |
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Preference number: 6 (lower is better) Translates to: PTDEKEAVTLDK*GEEGKESVDRH Trigger: ATGTCTGTCAACGGATTCTTTGCCTTCCTCTCCTCATTTGTCCAAGGTTACGGCTTCTTTCTCGTCTGTCGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 90 bp | ACTGAGGTCACGTCGTCAAAGGTGCAGGACTTAAACACTGAATCTTaGAAGGTTACCGATTTGAACTTGACTCCGAGGAATCTGCCGTTC | + |
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Preference number: 6 (lower is better) Translates to: TEVTSSKVQDLNTES*KVTDLNLTPRNLPF Trigger: GAACGGCAGATTCCTCGGAGTCAAGTTCAAATCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTGCACCTTTGACGACGTGACCTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CCA 72 bp | CCGAGGAATCTGCCGTTCTCGTATTCCATTCCAGTGTaGATCTGGTTCTCCATGGTAAAGTTAATGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: PRNLPFSYSIPV*IWFSMVKLMLK Trigger: CTTCAGCATTAACTTTACCATGGAGAACCAGATCCACACTGGAATGGAATACGAGAACGGCAGATTCCTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS TCA 72 bp | CTTGGACAAATGAGGAGAGGAAGGCAAAGAATCCGTTaGCAGACATGCAAATCAGAAGAGACTGCTTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: LGQMRRGRQRIR*QTCKSEETASF Trigger: GAAGGAAGCAGTCTCTTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCTCTCCTCATTTGTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 72 bp | CCTTGGACAAATGAGGAGAGGAAGGCAAAGAATCCGTaGACAGACATGCAAATCAGAAGAGACTGCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PWTNEERKAKNP*TDMQIRRDCFL Trigger: AAGGAAGCAGTCTCTTCTGATTTGCATGTCTGTCAACGGATTCTTTGCCTTCCTCTCCTCATTTGTCCAAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS TCA 72 bp | ATCAATAAACGTGCAGTTCTTGAAGTAGGTGTTGACTaGGGTCACGTCGTCAAAGGTGCAGGACTTAAACAC | + |
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Preference number: 6 (lower is better) Translates to: INKRAVLEVGVD*GHVVKGAGLKH Trigger: GTGTTTAAGTCCTGCACCTTTGACGACGTGACCTCAGTCAACACCTACTTCAAGAACTGCACGTTTATTGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CCA 72 bp | TGCACATTCCTAGTTAGCAGTGCATACTCATCAGACTaGAGATGTTTAATGACATCAGGGAACCAAACGGAC | + |
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Preference number: 6 (lower is better) Translates to: CTFLVSSAYSSD*RCLMTSGNQTD Trigger: GTCCGTTTGGTTCCCTGATGTCATTAAACATCTCCAGTCTGATGAGTATGCACTGCTAACTAGGAATGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 90 bp | TCAAAGGTGCAGGACTTAAACACTGAATCTTTGAAGGTTACCGATTaGAACTTGACTCCGAGGAATCTGCCGTTCTCGTATTCCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: SKVQDLNTESLKVTD*NLTPRNLPFSYSIP Trigger: TGGAATGGAATACGAGAACGGCAGATTCCTCGGAGTCAAGTTCAAATCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTGCACCTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 72 bp | CAGGACTTAAACACTGAATCTTTGAAGGTTACCGATTaGAACTTGACTCCGAGGAATCTGCCGTTCTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: QDLNTESLKVTD*NLTPRNLPFSY Trigger: ATACGAGAACGGCAGATTCCTCGGAGTCAAGTTCAAATCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 72 bp | ACGTCGTCAAAGGTGCAGGACTTAAACACTGAATCTTaGAAGGTTACCGATTTGAACTTGACTCCGAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: TSSKVQDLNTES*KVTDLNLTPRN Trigger: ATTCCTCGGAGTCAAGTTCAAATCGGTAACCTTCAAAGATTCAGTGTTTAAGTCCTGCACCTTTGACGACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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| CDS CAA 72 bp | TCCCGTGTCGCTCTCAATTTCGATCAGCTCATCTATTaGTTTGGGAGTCTTGATTTTATTTACCGTGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: SRVALNFDQLIY*FGSLDFIYRED Trigger: GTCTTCACGGTAAATAAAATCAAGACTCCCAAACAAATAGATGAGCTGATCGAAATTGAGAGCGACACGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161263.8 ENSMUST00000182289.2 |
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