Pregenerated sensors for SV2A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038486Ensembl transcript IDs: ENSMUST00000035371.9
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGAAGGGACCGTCCCTGTAGTCCCTGCCCATCAGGGTCACACACATaGACACAGGCACACACAGCTAAGACACCAAACACAGGAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: RRDRPCSPCPSGSHT*TQAHTAKTPNTGVR Trigger: CCTCACTCCTGTGTTTGGTGTCTTAGCTGTGTGTGCCTGTGTGCATGTGTGTGACCCTGATGGGCAGGGACTACAGGGACGGTCCCTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR GCA 90 bp | GGACGGACCCCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTaGTGGTTTGACCATACGTGCCTGGTTATTCTCCCTTTCTTTCCT | + |
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Preference number: 1 (lower is better) Translates to: GRTPASCPSSLCFRT*WFDHTCLVILPFFP Trigger: AGGAAAGAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGGGGTCCGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 90 bp | CGGACCCCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTaGTTTGACCATACGTGCCTGGTTATTCTCCCTTTCTTTCCTCTG | + |
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Preference number: 1 (lower is better) Translates to: RTPASCPSSLCFRTC*FDHTCLVILPFFPL Trigger: CAGAGGAAAGAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGGGGTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR TCA 90 bp | CCCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTGGTTTaGCCATACGTGCCTGGTTATTCTCCCTTTCTTTCCTCTGGTCCA | + |
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Preference number: 1 (lower is better) Translates to: PCFLPQLLVLSDLLV*PYVPGYSPFLSSGP Trigger: TGGACCAGAGGAAAGAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR GCA 90 bp | TACCTCATCCCAAAAGTGGAACGAAGGGACCGTCCCTGTAGTCCCTaGCCATCAGGGTCACACACATGCACACAGGCACACACAGCTAAG | + |
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Preference number: 1 (lower is better) Translates to: YLIPKVERRDRPCSP*PSGSHTCTQAHTAK Trigger: CTTAGCTGTGTGTGCCTGTGTGCATGTGTGTGACCCTGATGGGCAGGGACTACAGGGACGGTCCCTTCGTTCCACTTTTGGGATGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 90 bp | GTGAGGACCAGGACAGCAGGGCAGGGTAGGGATAAAAGGAATTATTaGTCTCACAGTGTGCCTGCCATCCCTAAAGCCCCTGAGACAGCC | + |
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Preference number: 1 (lower is better) Translates to: VRTRTAGQGRDKRNY*SHSVPAIPKAPETA Trigger: GGCTGTCTCAGGGGCTTTAGGGATGGCAGGCACACTGTGAGACCAATAATTCCTTTTATCCCTACCCTGCCCTGCTGTCCTGGTCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 90 bp | TTCCTCTGGTCCACTGCCTGTGTGAACAGGTCAGATGGAGGGCTGTaGCTAGTGGGTAGAACCTCTCTAGAGCAAGGAGAGAGTGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: FLWSTACVNRSDGGL*LVGRTSLEQGESES Trigger: GGACTCACTCTCTCCTTGCTCTAGAGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACAGGCAGTGGACCAGAGGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR TCA 90 bp | GGTCGCACATTCACACACTGGGCACTGGAGGAGAAGGCAGTCCTTTaGGCACAGACACTAGAGTTAAACAGTCACCACCTGGTTCAGTTA | + |
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Preference number: 1 (lower is better) Translates to: GRTFTHWALEEKAVL*AQTLELNSHHLVQL Trigger: TAACTGAACCAGGTGGTGACTGTTTAACTCTAGTGTCTGTGCTCAAAGGACTGCCTTCTCCTCCAGTGCCCAGTGTGTGAATGTGCGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAGGTGGATGTGTATCCCCTGGGGATGCAGTAAGGGAGAAGGCTACGTCCTTAGGGACGGACCCCTaGTTCCTGCCCCAGCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: QEGGCVSPGDAVREKATSLGTDP*FLPQLL Trigger: AAGGAGCTGGGGCAGGAAGCAGGGGTCCGTCCCTAA...GGACGTAGCCTTCTCCCTTACTGCATCCCCAGGGGATACACATCCACCTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCCCCATTATAACTCCATACCTGTGGTTCACCAGGGCCTAGGCGGAGGGAAACACCAAACACAGGAGTaGGGACCAGGACAGCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: SPHYNSIPVVHQGLGGGKHQTQE*GPGQQG Trigger: GCCCTGCTGTCCTGGTCCTCACTCCTGTGTTTGGTG...TTTCCCTCCGCCTAGGCCCTGGTGAACCACAGGTATGGAGTTATAATGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTGGTCCACTGCCTGTGTaGACAGGTCAGATGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ETEASGPCIRGPSRPSLFGPLPV*TGQMEG Trigger: GCCCTCCATCTGACCTGTTCACACAGGCAGTGGACC...AAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAGTTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR GCA 90 bp | CTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTGAGACGTCCCTGTAGTCCCTaGCCATCAGGGTCACACACA | + |
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Preference number: 2 (lower is better) Translates to: LRLLVPALGVPHDPAFLRRPCSP*PSGSHT Trigger: TGTGTGTGACCCTGATGGGCAGGGACTACAGGGACG...TCTCAAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 90 bp | CCCCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTGGTTaGACCATACGTGCCTGGTTATTCTCCCTTTCTTTCCTCTGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PLLPAPAPCAFGPAG*TIRAWLFSLSFLWS Trigger: GGACCAGAGGAAAGAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTTGGTGGCCAGAGGGCTaGGGTTTATTGCTACTCCCC | + |
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Preference number: 2 (lower is better) Translates to: ETEASGPCIRGPSRPSLFWWPEG*GLLLLP Trigger: GGGGAGTAGCAATAAACCTCAGCCCTCTGGCCACCA...AAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAGTTTC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR GCA 90 bp | GCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTGAGAAGGGTGCAGCCTTCTCCTTGTaGAAAGTTGAGGGTGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: ASGPCIRGPSRPSLFEKGAAFSL*KVEGGS Trigger: GCTGCCACCCTCAACTTTGCACAAGGAGAAGGCTGC...ACCCTTCTCAAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 90 bp | TGGCTAGTGGGTAGAACCTCTCTAGAGCAAGGAGAGAGTGAGTCCTaGTCAGGTGCCCTCAGGTCCCCCAAGATTGCAGGACTCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: WLVGRTSLEQGESES*SGALRSPKIAGLIP Trigger: TGGGATGAGTCCTGCAATCTTGGGGGACCTGAGGGCACCTGACAAGGACTCACTCTCTCCTTGCTCTAGAGAGGTTCTACCCACTAGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR CCA 90 bp | CAGGAAGGTGGATGTGTATCCCCTGGGGATGCAGTAAGGGAGAAGGCTACGTCCTCAGATGGAGGGCTGTaGCTAGTGGGTAGAACCTCT | + |
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Preference number: 2 (lower is better) Translates to: QEGGCVSPGDAVREKATSSDGGL*LVGRTS Trigger: AGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGA...GGACGTAGCCTTCTCCCTTACTGCATCCCCAGGGGATACACATCCACCTTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR CCA 90 bp | GAAACTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTTGTGAACAGGTCAGATaGAGGGCTGTGGCTAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: ETEASGPCIRGPSRPSLFCEQVR*RAVASG Trigger: CCCACTAGCCACAGCCCTCCATCTGACCTGTTCACA...AAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAGTTTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 90 bp | ACTGGGGGAGAGAAGGATGCAGCGCAGCCTTCTCCTTGTGCAAAGTaGAGGGTGGCAGCAGGTAAGGAGTACCTCATCCCAAAAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: TGGEKDAAQPSPCAK*RVAAGKEYLIPKVE Trigger: TTCCACTTTTGGGATGAGGTACTCCTTACCTGCTGCCACCCTCAACTTTGCACAAGGAGAAGGCTGCGCTGCATCCTTCTCTCCCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 90 bp | GGGAGGCTAGAGGGCACCCAAGGCCTTCCCACTCAAGAAGTTCTTTaGGTCCAAGCCTCAGCCCCCATTATAACTCCATACCTGTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: GRLEGTQGLPTQEVL*VQASAPIITPYLWF Trigger: GAACCACAGGTATGGAGTTATAATGGGGGCTGAGGCTTGGACCAAAAGAACTTCTTGAGTGGGAAGGCCTTGGGTGCCCTCTAGCCTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 90 bp | GGGTCGCACATTCACACACTGGGCACTGGAGGAGAAGGCAGTCCTTaGAGCACAGACACTAGAGTTAAACAGTCACCACCTGGTTCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GSHIHTLGTGGEGSP*STDTRVKQSPPGSV Trigger: AACTGAACCAGGTGGTGACTGTTTAACTCTAGTGTCTGTGCTCAAAGGACTGCCTTCTCCTCCAGTGCCCAGTGTGTGAATGTGCGACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 72 bp | GGGTGGCAGCAGGTAAGGAGTACCTCATCCCAAAAGTaGAACGAAGGGACCGTCCCTGTAGTCCCTGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GWQQVRSTSSQK*NEGTVPVVPAH Trigger: ATGGGCAGGGACTACAGGGACGGTCCCTTCGTTCCACTTTTGGGATGAGGTACTCCTTACCTGCTGCCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR GCA 72 bp | CCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTaGTGGTTTGACCATACGTGCCTGGTTATTCTCCCT | + |
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Preference number: 3 (lower is better) Translates to: PASCPSSLCFRT*WFDHTCLVILP Trigger: AGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR GCA 72 bp | CAGGAGACAGGAAGGTGGATGTGTATCCCCTGGGGATaGAGTAAGGGAGAAGGCTACGTCCAGCCACGGAAT | + |
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Preference number: 3 (lower is better) Translates to: QETGRWMCIPWG*SKGEGYVQPRN Trigger: ATTCCGTGGCTGGACGTAGCCTTCTCCCTTACTGCATCCCCAGGGGATACACATCCACCTTCCTGTCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR CAA 90 bp | GAGCAAGGAGAGAGTGAGTCCTTGTCAGGTGCCCTCAGGTCCCCCAAGATTGCATCTCCTTGTGCAAAGTaGAGGGTGGCAGCAGGTAAG | + |
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Preference number: 3 (lower is better) Translates to: EQGESESLSGALRSPKIASPCAK*RVAAGK Trigger: CTTACCTGCTGCCACCCTCAACTTTGCACAAGGAGA...TGCAATCTTGGGGGACCTGAGGGCACCTGACAAGGACTCACTCTCTCCTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 72 bp | TCCACTGCCTGTGTGAACAGGTCAGATGGAGGGCTGTaGCTAGTGGGTAGAACCTCTCTAGAGCAAGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: STACVNRSDGGL*LVGRTSLEQGE Trigger: CTCTCCTTGCTCTAGAGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACAGGCAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 72 bp | GCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTaGTTTGACCATACGTGCCTGGTTATTCTCCCTTTC | + |
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Preference number: 3 (lower is better) Translates to: ASCPSSLCFRTC*FDHTCLVILPF Trigger: GAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR TCA 72 bp | CACAGGCACACACAGCTAAGACACCAAACACAGGAGTaGGGACCAGGACAGCAGGGCAGGGTAGGGATAAAA | + |
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Preference number: 3 (lower is better) Translates to: HRHTQLRHQTQE*GPGQQGRVGIK Trigger: TTTTATCCCTACCCTGCCCTGCTGTCCTGGTCCTCACTCCTGTGTTTGGTGTCTTAGCTGTGTGTGCCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR TCA 72 bp | CTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTGGTTTaGCCATACGTGCCTGGTTATTCTCCCTTTCTTTCC | + |
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Preference number: 3 (lower is better) Translates to: LPQLLVLSDLLV*PYVPGYSPFLS Trigger: GGAAAGAAAGGGAGAATAACCAGGCACGTATGGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CCA 72 bp | ACCATACGTGCCTGGTTATTCTCCCTTTCTTTCCTCTaGTCCACTGCCTGTGTGAACAGGTCAGATGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: TIRAWLFSLSFL*STACVNRSDGG Trigger: CCCTCCATCTGACCTGTTCACACAGGCAGTGGACCAGAGGAAAGAAAGGGAGAATAACCAGGCACGTATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGATTCTGGGAGGTACTATAGAAAAACAGTGTTGTGTGTGTTCACTGAAACTAGCGCAGCCTTCTCCTaGTGCAAAGTTGAGGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: QDSGRYYRKTVLCVFTETSAAFS*CKVEGG Trigger: GCCACCCTCAACTTTGCACAAGGAGAAGGCTGCGCT...AGTTTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | CTCTGGTCCACTGCCTGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTCCATGCGTTCGCCTTTaGCCCCAGACTCTGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: LWSTACVNRSDGGLWLVGPCVRL*PQTLPG Trigger: CCCGGGCAGAGTCTGGGGGCAAAGGCGAACGCATGG...ACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACAGGCAGTGGACCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | GGGCCTAGGCGGAGGGAAAGAAGGGGAAGGCAGAAGTTCCGGAACCCTCGGAGCCAGAGCCAGCTCAAATaGTCCCCACGTTTCTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GPRRRERRGRQKFRNPRSQSQLK*SPRFSC Trigger: GCAGGAGAAACGTGGGGAGCATTTGAGCTGGCTCTG...GCTCCGAGGGTTCCGGAACTTCTGCCTTCCCCTTCTTTCCCTCCGCCTAGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | AGGGTAGGACGGGGGCAGCTCTACCTACAAGGCTGTTCTGTGGAAGGGCAAAACCAGGGGTGCCCCATCTaGCATGCGTTCGCCTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: RVGRGQLYLQGCSVEGQNQGCPI*HAFAFA Trigger: GGCAAAGGCGAACGCATGGCAGATGGGGCACCCCTG...GTTTTGCCCTTCCACAGAACAGCCTTGTAGGTAGAGCTGCCCCCGTCCTACCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | GGACCCCTGCTTCCTGCCCCAGCTCCTTGTGCTTTCGGACCTGCTGGTTTGACCTCCACAGCCTGGAGATaGCGGATCATGTCGGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GPLLPAPAPCAFGPAGLTSTAWR*RIMSGN Trigger: GTTTCCCGACATGATCCGCCATCTCCAGGCTGTGGA...GGTCAAACCAGCAGGTCCGAAAGCACAAGGAGCTGGGGCAGGAAGCAGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | GGGCCTAGGCGGAGGGAAAGAAGGGGAAGGCAGAAGTTCCGGAACCCTCGGAGCGTGTCCCCAAGAAGCTaGCAAAGTACACCATGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPRRRERRGRQKFRNPRSVSPRS*QSTPCR Trigger: CCTACATGGTGTACTTTGTCAGCTTCTTGGGGACAC...GCTCCGAGGGTTCCGGAACTTCTGCCTTCCCCTTCTTTCCCTCCGCCTAGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGCTACGTCCAGCCACGGAATGGTGAAAGAAGGGTCGCACATTCACACGTGCCCCATCTGCCATaGGTTCGCCTTTGCCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GEGYVQPRNGERRVAHSHVPHLP*VRLCPQ Trigger: CTGGGGGCAAAGGCGAACGCATGGCAGATGGGGCAC...GTGTGAATGTGCGACCCTTCTTTCACCATTCCGTGGCTGGACGTAGCCTTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | CAGGAAGGTGGATGTGTATCCCCTGGGGATGCAGTAAGGGAGAAGGCTACGTCCAAGACGCGCTCAGGGTaGCCCTTGGCTCGCATGTTG | + |
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Preference number: 4 (lower is better) Translates to: QEGGCVSPGDAVREKATSKTRSG*PLARML Trigger: CAACATGCGAGCCAAGGGCCACCCTGAGCGCGTCTT...GGACGTAGCCTTCTCCCTTACTGCATCCCCAGGGGATACACATCCACCTTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | AGCCCCCATTATAACTCCATACCTGTGGTTCACCAGGGCCTAGGCGGAGGGAAACTTTGGCCCCACGGATaGACGCTGCTCGGTCTCGAA | + |
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Preference number: 4 (lower is better) Translates to: SPHYNSIPVVHQGLGGGKLWPHG*TLLGLE Trigger: TTCGAGACCGAGCAGCGTTCATCCGTGGGGCCAAAG...TTTCCCTCCGCCTAGGCCCTGGTGAACCACAGGTATGGAGTTATAATGGGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | TGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTAGAACCTCTCTAGAGCACTCCAGCCAGGGGTaGCCCATCTGCCATGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: CVNRSDGGLWLVGRTSLEHSSQG*PICHAF Trigger: GAACGCATGGCAGATGGGGCACCCCTGGCTGGAGTG...CTCTAGAGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | GGGCCTAGGCGGAGGGAAAGAAGGGGAAGGCAGAAGTTCCGGAACCCTCGGAGCAATAGGAGAAGACTATaGGGATGGAACCGCCAATCC | + |
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Preference number: 4 (lower is better) Translates to: GPRRRERRGRQKFRNPRSNRRRL*GWNRQS Trigger: GGATTGGCGGTTCCATCCCCATAGTCTTCTCCTATT...GCTCCGAGGGTTCCGGAACTTCTGCCTTCCCCTTCTTTCCCTCCGCCTAGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | TGTATCCCCTGGGGATGCAGTAAGGGAGAAGGCTACGTCCAGCCACGGAATGGTCGTACTCCCCAGCGCTaGTACCAGGTTCCTGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: CIPWGCSKGEGYVQPRNGRTPQR*YQVPVS Trigger: TGACACAGGAACCTGGTACCAGCGCTGGGGAGTACG...ACCATTCCGTGGCTGGACGTAGCCTTCTCCCTTACTGCATCCCCAGGGGATACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | AGGGTAGGACGGGGGCAGCTCTACCTACAAGGCTGTTCTGTGGAAGGGCAAAACAAATTCCCCCAAACCTaGCCCCCAAGGCTCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RVGRGQLYLQGCSVEGQNKFPQT*PPRLKA Trigger: GGCTTTGAGCCTTGGGGGTCAGGTTTGGGGGAATTT...GTTTTGCCCTTCCACAGAACAGCCTTGTAGGTAGAGCTGCCCCCGTCCTACCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | CCCAGCATCCTTGGGAGGCTAGAGGGCACCCAAGGCCTTCCCACTCAAGAAGTTGCCGATACTCTGGACTaGAGCAGGAGAGGAAATTCC | + |
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Preference number: 4 (lower is better) Translates to: PSILGRLEGTQGLPTQEVADTLD*SRRGNS Trigger: GGAATTTCCTCTCCTGCTTCAGTCCAGAGTATCGGC...AACTTCTTGAGTGGGAAGGCCTTGGGTGCCCTCTAGCCTCCCAAGGATGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | GAGCAAGGAGAGAGTGAGTCCTTGTCAGGTGCCCTCAGGTCCCCCAAGATTGCACCATCATCATCAGCGTaGTGCGCCGATACTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: EQGESESLSGALRSPKIAPSSSA*CADTLD Trigger: GTCCAGAGTATCGGCGCATCACGCTGATGATGATGG...TGCAATCTTGGGGGACCTGAGGGCACCTGACAAGGACTCACTCTCTCCTTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | GGGGTTCTGCCTCCAGCCCCAGCACAGATACAAGATTCTGGGAGGTACTATAGATTTGCCCCCAGACTCTaGCCGGGGGATGCCCTGATA | + |
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Preference number: 4 (lower is better) Translates to: GVLPPAPAQIQDSGRYYRFAPRL*PGDALI Trigger: TATCAGGGCATCCCCCGGGCAGAGTCTGGGGGCAAA...TCTATAGTACCTCCCAGAATCTTGTATCTGTGCTGGGGCTGGAGGCAGAACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | AACGAAGGGACCGTCCCTGTAGTCCCTGCCCATCAGGGTCACACACATGCACACAGAGCAGAGCGATCATaGCTGACTCGCTGTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: NEGTVPVVPAHQGHTHAHRAERS*LTRCSQ Trigger: TTGGGAACAGCGAGTCAGCCATGATCGCTCTGCTCT...GTGTGCATGTGTGTGACCCTGATGGGCAGGGACTACAGGGACGGTCCCTTCGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | GCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTGAGAAGGGTCCCCCTCGGTGGATCTaGTTCTCCAGTGTGAAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ASGPCIRGPSRPSLFEKGPPRWI*FSSVKL Trigger: TAACTTCACACTGGAGAATCAGATCCACCGAGGGGG...ACCCTTCTCAAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | CTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTGAGACGGGAATACTCATCCTaGACTCTGTCAAGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLVPALGVPHDPAFLRREYSS*TLSRPF Trigger: GAAGGGCCTTGACAGAGTCCAGGATGAGTATTCCCG...TCTCAAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | CTCTGGTCCACTGCCTGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTCTAGCATGCCTTTGTTaGAGTCCGACAGGCACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LWSTACVNRSDGGLWLVGLACLC*SPTGTC Trigger: ACATGTGCCTGTCGGACTCCAACAAAGGCATGCTAG...ACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACAGGCAGTGGACCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | GGAGAAGGCTACGTCCAGCCACGGAATGGTGAAAGAAGGGTCGCACATTCACACCCCCTGGGAACACTTTaGTTCGGGCTGCATAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGYVQPRNGERRVAHSHPLGTL*FGLHSP Trigger: TGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGG...GTGTGAATGTGCGACCCTTCTTTCACCATTCCGTGGCTGGACGTAGCCTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 72 bp | GGTAGAACCTCTCTAGAGCAAGGAGAGAGTGAGTCCTaGTCAGGTGCCCTCAGGTCCCCCAAGATTGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRTSLEQGESES*SGALRSPKIAG Trigger: TCCTGCAATCTTGGGGGACCTGAGGGCACCTGACAAGGACTCACTCTCTCCTTGCTCTAGAGAGGTTCTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | TGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTAGAACCTCTCTAGAGGATGCGCCGATACTCTaGACTGAAGCAGGAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVNRSDGGLWLVGRTSLEDAPIL*TEAGEE Trigger: TTCCTCTCCTGCTTCAGTCCAGAGTATCGGCGCATC...CTCTAGAGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 72 bp | GAGGGCACCCAAGGCCTTCCCACTCAAGAAGTTCTTTaGGTCCAAGCCTCAGCCCCCATTATAACTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: EGTQGLPTQEVL*VQASAPIITPY Trigger: GTATGGAGTTATAATGGGGGCTGAGGCTTGGACCAAAAGAACTTCTTGAGTGGGAAGGCCTTGGGTGCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | TACTACTCTTGGCTTATATTAGACAGTAGAGTGGTACCCCTACCCCATGGTACACGGGGACTCTCTGGCTaGGTAGTCAGAGCCCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: YYSWLILDSRVVPLPHGTRGLSG*VVRAPM Trigger: CATCGGGGCTCTGACTACGCAGCCAGAGAGTCCCCG...TGTACCATGGGGTAGGGGTACCACTCTACTGTCTAATATAAGCCAAGAGTAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGCTACGTCCAGCCACGGAATGGTGAAAGAAGGGTCGCACATTCACACATCCAGGCTTCGTCATaGTTCCCATTCTCTAGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GEGYVQPRNGERRVAHSHIQASS*FPFSRK Trigger: CTTCCTAGAGAATGGGAAGCATGACGAAGCCTGGAT...GTGTGAATGTGCGACCCTTCTTTCACCATTCCGTGGCTGGACGTAGCCTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | TACTACTCTTGGCTTATATTAGACAGTAGAGTGGTACCCCTACCCCATGGTACAGAAGCGGGGACTCTCTaGCTGCGTAGTCAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YYSWLILDSRVVPLPHGTEAGTL*LRSQSP Trigger: GGGGCTCTGACTACGCAGCCAGAGAGTCCCCGCTTC...TGTACCATGGGGTAGGGGTACCACTCTACTGTCTAATATAAGCCAAGAGTAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | CTAAAAACTACAACACGTCACAGCTACGTTGGGAGTGGAGAGAGAGTACCAAAGGCTCAGGGTGGCCCTTaGCTCGCATGTTGGTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTTTRHSYVGSGERVPKAQGGP*LACWCR Trigger: ACGACACCAACATGCGAGCCAAGGGCCACCCTGAGC...CTTTGGTACTCTCTCTCCACTCCCAACGTAGCTGTGACGTGTTGTAGTTTTTAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | ATCAATGGAGTCAGGTTTAGGGTTCCCCAGGAGACAGGAAGGTGGATGTGTATCATCCTCAAAGGACACTaGCTTCAGACGCAGCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: INGVRFRVPQETGRWMCIILKGH*LQTQPD Trigger: ATCGGGCTGCGTCTGAAGTCAGTGTCCTTTGAGGAT...GATACACATCCACCTTCCTGTCTCCTGGGGAACCCTAAACCTGACTCCATTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ACGAGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACGATGGCCCAGGCCATTaGAGCTGCATACACTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSVCIHPHTVQLSCLRTYDGPGH*SCIHST Trigger: GGTGGAGTGTATGCAGCTGCAATGGCCTGGGCCATC...GTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACTCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | AGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACATACTCCACGCGCTCCCCTaGGAACACTTTGGTTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVCIHPHTVQLSCLRTYILHALP*EHFGSG Trigger: GCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAG...TATGTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ATCAATGGAGTCAGGTTTAGGGTTCCCCAGGAGACAGGAAGGTGGATGTGTATCACCTTCTTGGCCGCATaGTTCTTCACTTCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: INGVRFRVPQETGRWMCITFLAA*FFTSLA Trigger: TGCCAAGGAAGTGAAGAAGCATGCGGCCAAGAAGGT...GATACACATCCACCTTCCTGTCTCCTGGGGAACCCTAAACCTGACTCCATTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ACGAGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACAAGTTAAACGTCACATaGTCCACGCGCTCCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TSVCIHPHTVQLSCLRTYKLNVT*STRSPG Trigger: CCCAGGGGAGCGCGTGGAGCATGTGACGTTTAACTT...GTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ATAAAAGGAATTATTGGTCTCACAGTGTGCCTGCCATCCCTAAAGCCCCTGAGACAGCGCGTTCCAGGATaGGATGCTAACTCCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKGIIGLTVCLPSLKPLRQRVPG*DANSPK Trigger: TTTGGGGGAGTTAGCATCGCATCCTGGAACGCGCTG...TCTCAGGGGCTTTAGGGATGGCAGGCACACTGTGAGACCAATAATTCCTTTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ATAAAAGGAATTATTGGTCTCACAGTGTGCCTGCCATCCCTAAAGCCCCTGAGATATTGTGCAGGAACGTaGTGTTCACCAGCCGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IKGIIGLTVCLPSLKPLRYCAGT*CSPAGC Trigger: ACAGCCGGCTGGTGAACAGCACGTTCCTGCACAATA...TCTCAGGGGCTTTAGGGATGGCAGGCACACTGTGAGACCAATAATTCCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ACGAGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACTCCCCACGTTTCTCCTaGGCCAGAAACTCCGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TSVCIHPHTVQLSCLRTYSPRFS*ARNSEK Trigger: TTTTTCGGAGTTTCTGGCGCAGGAGAAACGTGGGGA...GTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACTCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | ACGAGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACTCATCATCTTCATCGTaGCCCTCGGTGGCATCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TSVCIHPHTVQLSCLRTYSSSSS*PSVASL Trigger: TAGTGATGCCACCGAGGGCCACGATGAAGATGATGA...GTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACTCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | CAAGATTCTGGGAGGTACTATAGAAAAACAGTGTTGTGTGTGTTCACTGAAACTCCCACGGATGAACGCTaGTCGGTCTCGAAAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QDSGRYYRKTVLCVFTETPTDER*SVSKAF Trigger: GAAGGCTTTCGAGACCGAGCAGCGTTCATCCGTGGG...AGTTTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | AGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACATATGTCTTTCTCAGCACTaGGCAGCACAAAGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SVCIHPHTVQLSCLRTYICLSQH*AAQSPP Trigger: TGGTGGGCTTTGTGCTGCCCAGTGCTGAGAAAGACA...TATGTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | ATAAAAGGAATTATTGGTCTCACAGTGTGCCTGCCATCCCTAAAGCCCCTGAGAATGGTTTCATACTGCTaGGCCAATTCTTCCCGATCT | + |
|
Preference number: 4 (lower is better) Translates to: IKGIIGLTVCLPSLKPLRMVSYC*ANSSRS Trigger: AGATCGGGAAGAATTGGCTCAGCAGTATGAAACCAT...TCTCAGGGGCTTTAGGGATGGCAGGCACACTGTGAGACCAATAATTCCTTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ATACAAGATTCTGGGAGGTACTATAGAAAAACAGTGTTGTGTGTGTTCACTGAAACTCTGCCCGGGGGATaGCCTGATATTCTCCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IQDSGRYYRKTVLCVFTETLPGG*PDILPH Trigger: ATGAGGGAGAATATCAGGGCATCCCCCGGGCAGAGT...TTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR GCA 90 bp | ATACAAGATTCTGGGAGGTACTATAGAAAAACAGTGTTGTGTGTGTTCACTGAAGATCCCCAGCACAGCTaGCAGCTTACACAGGGCATT | + |
|
Preference number: 4 (lower is better) Translates to: IQDSGRYYRKTVLCVFTEDPQHS*QLTQGI Trigger: AATGCCCTGTGTAAGCTGGCAGCTGTGCTGGGGATC...TTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR TCA 90 bp | ATACAAGATTCTGGGAGGTACTATAGAAAAACAGTGTTGTGTGTGTTCACTGAACAGAGCGATCATGGCTaGCTCGCTGTTCCCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IQDSGRYYRKTVLCVFTEQSDHG*LAVPKR Trigger: TCTTTTGGGAACAGCGAGTCAGCCATGATCGCTCTG...TTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CCA 90 bp | AGTCCTTTGAGCACAGACACTAGAGTTAAACAGTCACCACCTGGTTCAGTTACAGTTCCTGTGTCAGACTaGATCTCAATCAATTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPLSTDTRVKQSPPGSVTVPVSD*ISINSS Trigger: GGATGAATTGATTGAGATCCAGTCTGACACAGGAAC...TGTAACTGAACCAGGTGGTGACTGTTTAACTCTAGTGTCTGTGCTCAAAGGACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| 3UTR CAA 72 bp | ATACAAGATTCTGGGAGGTACTATAGAAAAACAGTGTaGTGTGTGTTCACTGAAACTACTACTCTTGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: IQDSGRYYRKTV*CVFTETTTLGL Trigger: TAAGCCAAGAGTAGTAGTTTCAGTGAACACACACAACACTGTTTTTCTATAGTACCTCCCAGAATCTTGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | CGTCACATGCTCCACGCGCTCCCCTGGGAACACTTTGGTTCGGGCTaGATAGTCCACAGCCTGGAGATGGCGGATCATGTCGGGAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: RHMLHALPWEHFGSG*IVHSLEMADHVGKP Trigger: TGGTTTCCCGACATGATCCGCCATCTCCAGGCTGTGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAGCATGTGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | TGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTAGAACCTCTCTAGAGGCCATGCGTTCGCCTTaGCCCCCAGACTCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CVNRSDGGLWLVGRTSLEAMRSP*PPDSAR Trigger: CCGGGCAGAGTCTGGGGGCAAAGGCGAACGCATGGC...CTCTAGAGAGGTTCTACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | CCTTCGCCTGTCCCCGTCACGTCTAGCGGGCAGCCTTCCTTATTGTaGAGGAACGTGCTGTTCACCAGCCGGCTGTTCACGAACTTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PSPVPVTSSGQPSLL*RNVLFTSRLFTNLY Trigger: GTACAAGTTCGTGAACAGCCGGCTGGTGAACAGCACGTTCCTGCACAATAAGGAAGGCTGCCCGCTAGACGTGACGGGGACAGGCGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | GGAAGGGTAGAGCTCAACGGTCAGCACGTCCAGCGCGTTCCAGGATaGGATGCTAACTCCCCCAAAAAGGCAGAGCAGAGCGATCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRVELNGQHVQRVPG*DANSPKKAEQSDHG Trigger: GCCATGATCGCTCTGCTCTGCCTTTTTGGGGGAGTTAGCATCGCATCCTGGAACGCGCTGGACGTGCTGACCGTTGAGCTCTACCCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | CTCTGGTCCACTGCCTGTGTGAACAGGTCAGATGGAGGGCTGTGGCTAGTGGGTTCCTTGGCAATGTCTTaGGCCCCACGGATGAACGCT | + |
|
Preference number: 5 (lower is better) Translates to: LWSTACVNRSDGGLWLVGSLAMS*APRMNA Trigger: AGCGTTCATCCGTGGGGCCAAAGACATTGCCAAGGA...ACCCACTAGCCACAGCCCTCCATCTGACCTGTTCACACAGGCAGTGGACCAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | TCGTCATGCTTCCCATTCTCTAGGAAGAAGCGGGGACTCTCTGGCTaGGTAGTCAGAGCCCCGATGGCAAACACAGAGGGAAAGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SSCFPFSRKKRGLSG*VVRAPMANTEGKAH Trigger: GTGTGCCTTTCCCTCTGTGTTTGCCATCGGGGCTCTGACTACGCAGCCAGAGAGTCCCCGCTTCTTCCTAGAGAATGGGAAGCATGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 90 bp | CACGTTTCTCCTGCGCCAGAAACTCCGAAAAATAGGAGAAGACTATaGGGATGGAACCGCCAATCCCGACCCCGGAAAGGAGGCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HVSPAPETPKNRRRL*GWNRQSRPRKGGGR Trigger: TCTGCCGCCTCCTTTCCGGGGTCGGGATTGGCGGTTCCATCCCCATAGTCTTCTCCTATTTTTCGGAGTTTCTGGCGCAGGAGAAACGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | GGGGTTCTGCCTCCAGCCCCAGCACAGATACAAGATTCTGGGAGGTACTATAGAAGGCCTAGCATGCCTTaGTTGGAGTCCGACAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GVLPPAPAQIQDSGRYYRRPSMP*LESDRH Trigger: GTGCCTGTCGGACTCCAACAAAGGCATGCTAGGCCT...TCTATAGTACCTCCCAGAATCTTGTATCTGTGCTGGGGCTGGAGGCAGAACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | GAGCAAGGAGAGAGTGAGTCCTTGTCAGGTGCCCTCAGGTCCCCCAAGATTGCAAAGGCGAAGACGCTGTaGACTGAGAGTGAGATGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQGESESLSGALRSPKIAKAKTL*TESEMS Trigger: GCTCATCTCACTCTCAGTCAACAGCGTCTTCGCCTT...TGCAATCTTGGGGGACCTGAGGGCACCTGACAAGGACTCACTCTCTCCTTGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | TCATCCTGGACTCTGTCAAGGCCCTTCACCACCTTCTTGGCCGCATaGTTCTTCACTTCCTTGGCAATGTCTTTGGCCCCACGGATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SSWTLSRPFTTFLAA*FFTSLAMSLAPRMN Trigger: GTTCATCCGTGGGGCCAAAGACATTGCCAAGGAAGTGAAGAAGCATGCGGCCAAGAAGGTGGTGAAGGGCCTTGACAGAGTCCAGGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 90 bp | GGTGATGCCCACAAAGGATGTGAAGATGCTGATCCCCAGCACAGCTaGCAGCTTACACAGGGCATTCAGGAAGCCAAAGGCAGTAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GDAHKGCEDADPQHS*QLTQGIQEAKGSSP Trigger: AGGACTACTGCCTTTGGCTTCCTGAATGCCCTGTGTAAGCTGGCAGCTGTGCTGGGGATCAGCATCTTCACATCCTTTGTGGGCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 90 bp | ATTCTCCAGTGTGAAGTTAAACGTCACATGCTCCACGCGCTCCCCTaGGAACACTTTGGTTCGGGCTGCATAGTCCACAGCCTGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: ILQCEVKRHMLHALP*EHFGSGCIVHSLEM Trigger: CATCTCCAGGCTGTGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAGCATGTGACGTTTAACTTCACACTGGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS TCA 90 bp | AGCCCGATGAACTTGTCATTGAAGTACTGTCCCCCTCGGTGGATCTaGTTCTCCAGTGTGAAGTTAAACGTCACATGCTCCACGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPMNLSLKYCPPRWI*FSSVKLNVTCSTRS Trigger: GGAGCGCGTGGAGCATGTGACGTTTAACTTCACACTGGAGAATCAGATCCACCGAGGGGGACAGTACTTCAATGACAAGTTCATCGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | GAAACTGAGGCTTCTGGTCCCTGCATTAGGGGTCCCTCACGACCCAGCCTTTTTCGGCTGTTCACGAACTaGTACTCAAATAGGTCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: ETEASGPCIRGPSRPSLFRLFTN*YSNRSV Trigger: CACTGACCTATTTGAGTACAAGTTCGTGAACAGCCG...AAAAAGGCTGGGTCGTGAGGGACCCCTAATGCAGGGACCAGAAGCCTCAGTTTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | GGGGTTCTGCCTCCAGCCCCAGCACAGATACAAGATTCTGGGAGGTACTATAGATTGCGGAAGAATGTGTaGCTGGATGTAACATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GVLPPAPAQIQDSGRYYRLRKNV*LDVTSS Trigger: TGAAGATGTTACATCCAGCAACACATTCTTCCGCAA...TCTATAGTACCTCCCAGAATCTTGTATCTGTGCTGGGGCTGGAGGCAGAACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS-3UTR CAA 90 bp | AGTGTATGTATACATCCACACACAGTCCAGCTAAGCTGCCTCAGAACTTACATACCTAGCATGCCTTTGTaGGAGTCCGACAGGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: SVCIHPHTVQLSCLRTYIPSMPL*ESDRHM Trigger: CATGTGCCTGTCGGACTCCAACAAAGGCATGCTAGG...TATGTAAGTTCTGAGGCAGCTTAGCTGGACTGTGTGTGGATGTATACATACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS TCA 90 bp | ATCTTCAAAGTAACACTCCTCAAACAGGGAATCCTCAAAGGACACTaGCTTCAGACGCAGCCCGATGAACTTGTCATTGAAGTACTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFKVTLLKQGILKGH*LQTQPDELVIEVLS Trigger: GGACAGTACTTCAATGACAAGTTCATCGGGCTGCGTCTGAAGTCAGTGTCCTTTGAGGATTCCCTGTTTGAGGAGTGTTACTTTGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 72 bp | CTCCACGCGCTCCCCTGGGAACACTTTGGTTCGGGCTaGATAGTCCACAGCCTGGAGATGGCGGATCATGTC | + |
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Preference number: 6 (lower is better) Translates to: LHALPWEHFGSG*IVHSLEMADHV Trigger: GACATGATCCGCCATCTCCAGGCTGTGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 72 bp | GTCCCCGTCACGTCTAGCGGGCAGCCTTCCTTATTGTaGAGGAACGTGCTGTTCACCAGCCGGCTGTTCACG | + |
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Preference number: 6 (lower is better) Translates to: VPVTSSGQPSLL*RNVLFTSRLFT Trigger: CGTGAACAGCCGGCTGGTGAACAGCACGTTCCTGCACAATAAGGAAGGCTGCCCGCTAGACGTGACGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 72 bp | ACGTCACATGCTCCACGCGCTCCCCTGGGAACACTTTaGTTCGGGCTGCATAGTCCACAGCCTGGAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: TSHAPRAPLGTL*FGLHSPQPGDG Trigger: GCCATCTCCAGGCTGTGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAGCATGTGACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CAA 72 bp | CCTGTCCCCGTCACGTCTAGCGGGCAGCCTTCCTTATaGTGCAGGAACGTGCTGTTCACCAGCCGGCTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PVPVTSSGQPSL*CRNVLFTSRLF Trigger: GAACAGCCGGCTGGTGAACAGCACGTTCCTGCACAATAAGGAAGGCTGCCCGCTAGACGTGACGGGGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CAA 90 bp | GCACCTTCGCCTGTCCCCGTCACGTCTAGCGGGCAGCCTTCCTTATaGTGCAGGAACGTGCTGTTCACCAGCCGGCTGTTCACGAACTTG | + |
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Preference number: 6 (lower is better) Translates to: APSPVPVTSSGQPSL*CRNVLFTSRLFTNL Trigger: CAAGTTCGTGAACAGCCGGCTGGTGAACAGCACGTTCCTGCACAATAAGGAAGGCTGCCCGCTAGACGTGACGGGGACAGGCGAAGGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 72 bp | GAGCTCAACGGTCAGCACGTCCAGCGCGTTCCAGGATaGGATGCTAACTCCCCCAAAAAGGCAGAGCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: ELNGQHVQRVPG*DANSPKKAEQS Trigger: GCTCTGCTCTGCCTTTTTGGGGGAGTTAGCATCGCATCCTGGAACGCGCTGGACGTGCTGACCGTTGAGCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 72 bp | CCTGCGCCAGAAACTCCGAAAAATAGGAGAAGACTATaGGGATGGAACCGCCAATCCCGACCCCGGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: PAPETPKNRRRL*GWNRQSRPRKG Trigger: TCCTTTCCGGGGTCGGGATTGGCGGTTCCATCCCCATAGTCTTCTCCTATTTTTCGGAGTTTCTGGCGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 72 bp | TGTGAAGTTAAACGTCACATGCTCCACGCGCTCCCCTaGGAACACTTTGGTTCGGGCTGCATAGTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: CEVKRHMLHALP*EHFGSGCIVHS Trigger: GCTGTGGACTATGCAGCCCGAACCAAAGTGTTCCCAGGGGAGCGCGTGGAGCATGTGACGTTTAACTTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CAA 72 bp | CCCTGGACGAAGGACGAGAAGAAGGCGAAGACGCTGTaGACTGAGAGTGAGATGAGCAGACACTGTCTCCGA | + |
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Preference number: 6 (lower is better) Translates to: PWTKDEKKAKTL*TESEMSRHCLR Trigger: TCGGAGACAGTGTCTGCTCATCTCACTCTCAGTCAACAGCGTCTTCGCCTTCTTCTCGTCCTTCGTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 72 bp | ACTCTGTCAAGGCCCTTCACCACCTTCTTGGCCGCATaGTTCTTCACTTCCTTGGCAATGTCTTTGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: TLSRPFTTFLAA*FFTSLAMSLAP Trigger: TGGGGCCAAAGACATTGCCAAGGAAGTGAAGAAGCATGCGGCCAAGAAGGTGGTGAAGGGCCTTGACAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS GCA 72 bp | CACAAAGGATGTGAAGATGCTGATCCCCAGCACAGCTaGCAGCTTACACAGGGCATTCAGGAAGCCAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HKGCEDADPQHS*QLTQGIQEAKG Trigger: GCCTTTGGCTTCCTGAATGCCCTGTGTAAGCTGGCAGCTGTGCTGGGGATCAGCATCTTCACATCCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CCA 72 bp | TGTTGGAGTCCGACAGGCACATGTCTTTCTCAGCACTaGGCAGCACAAAGCCCACCACAAAGACCTCTACAC | + |
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Preference number: 6 (lower is better) Translates to: CWSPTGTCLSQH*AAQSPPQRPLH Trigger: GTGTAGAGGTCTTTGTGGTGGGCTTTGTGCTGCCCAGTGCTGAGAAAGACATGTGCCTGTCGGACTCCAACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS CAA 72 bp | ATGCCCAGGTACACAATGAGGCCTAGCATGCCTTTGTaGGAGTCCGACAGGCACATGTCTTTCTCAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: MPRYTMRPSMPL*ESDRHMSFSAL Trigger: CAGTGCTGAGAAAGACATGTGCCTGTCGGACTCCAACAAAGGCATGCTAGGCCTCATTGTGTACCTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS TCA 72 bp | AACTTGTCATTGAAGTACTGTCCCCCTCGGTGGATCTaGTTCTCCAGTGTGAAGTTAAACGTCACATGCTCC | + |
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Preference number: 6 (lower is better) Translates to: NLSLKYCPPRWI*FSSVKLNVTCS Trigger: GGAGCATGTGACGTTTAACTTCACACTGGAGAATCAGATCCACCGAGGGGGACAGTACTTCAATGACAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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| CDS TCA 72 bp | GTAACACTCCTCAAACAGGGAATCCTCAAAGGACACTaGCTTCAGACGCAGCCCGATGAACTTGTCATTGAA | + |
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Preference number: 6 (lower is better) Translates to: VTLLKQGILKGH*LQTQPDELVIE Trigger: TTCAATGACAAGTTCATCGGGCTGCGTCTGAAGTCAGTGTCCTTTGAGGATTCCCTGTTTGAGGAGTGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035371.9 |
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