Pregenerated sensors for SUZ12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017548Ensembl transcript IDs: ENSMUST00000017692.15, ENSMUST00000126091.2, ENSMUST00000144188.2, ENSMUST00000163272.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGCATGGAAGGCAGTCACACTGCCTCCGACAGGAGACCAACTGGTaGTGTTTTGAACTTGTAACACAACTGATGCAGAACTTGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: LHGRQSHCLRQETNW*CFELVTQLMQNLLC Trigger: ACAAAGCAAGTTCTGCATCAGTTGTGTTACAAGTTCAAAACAGCACCAGTTGGTCTCCTGTCGGAGGCAGTGTGACTGCCTTCCATGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR TCA 90 bp | CAGGCTAAAACCAAATTGAGGACATCACTAAAGTTGATAAGCACGTaGGGAGAAGCAGCCAAGCAGACCCACAGAACCTCCGTGCTGAAA | + |
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Preference number: 1 (lower is better) Translates to: QAKTKLRTSLKLIST*GEAAKQTHRTSVLK Trigger: TTTCAGCACGGAGGTTCTGTGGGTCTGCTTGGCTGCTTCTCCTCACGTGCTTATCAACTTTAGTGATGTCCTCAATTTGGTTTTAGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR TCA 90 bp | GAAATGCTCAGAACCCACTACCCAGAGGCAAAAATCAGAGTTCAGTaGACTCGTGAGGAGAGTTTACCAGCTAGGGAGCCTACAACGAAA | + |
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Preference number: 1 (lower is better) Translates to: EMLRTHYPEAKIRVQ*TREESLPAREPTTK Trigger: TTTCGTTGTAGGCTCCCTAGCTGGTAAACTCTCCTCACGAGTTCACTGAACTCTGATTTTTGCCTCTGGGTAGTGGGTTCTGAGCATTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR TCA 90 bp | TATGGATATTCTAATCAAGAAGGATGTCACAAAGGAAACAAGGTGTaGCATCTTCTGGTTTACACTCAGAGACACCCTCCCCACAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: YGYSNQEGCHKGNKV*HLLVYTQRHPPHSG Trigger: GCCACTGTGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTGTGACATCCTTCTTGATTAGAATATCCATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACGCACGGGACGGCACTaGATGGCTGCATGGAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: QRKQGVTSSGLHSETPSPRTGRH*MAAWKA Trigger: TGCCTTCCATGCAGCCATGCAGTGCCGTCCCGTGCG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGCACTGCATGGCTGCATaGAAGGCAGTCACACTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SETPSPQWHLLNLQLFLLHCMAA*KAVTLP Trigger: AGGCAGTGTGACTGCCTTCCATGCAGCCATGCAGTG...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR TCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTAAGTTGATAAGCACGTaGGGAGAAGCAGCCAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LHSETPSPQWHLLNLQLFKLIST*GEAAKQ Trigger: CTGCTTGGCTGCTTCTCCTCACGTGCTTATCAACTT...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGCTAAAACCATTCACTTaGAAAGGAACAGCGAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SETPSPQWHLLNLQLFLLLKPFT*KGTASS Trigger: GGAGCTCGCTGTTCCTTTTCAAGTGAATGGTTTTAG...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACTCATCCCAGATGCATaGTTTCTGAATCAAGGGTCA | + |
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Preference number: 2 (lower is better) Translates to: QRKQGVTSSGLHSETPSPLIPDA*FLNQGS Trigger: TGACCCTTGATTCAGAAATCATGCATCTGGGATGAG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR TCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCAGATGCATGATTTCTaGATCAAGGGTCAACGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LHSETPSPQWHLLNLQLFQMHDF*IKGQRL Trigger: CAAACGTTGACCCTTGATTCAGAAATCATGCATCTG...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACAACTGGTGCTGTTTTaGACTTGTAACACAACTGAT | + |
|
Preference number: 2 (lower is better) Translates to: QRKQGVTSSGLHSETPSPQLVLF*TCNTTD Trigger: ATCAGTTGTGTTACAAGTTCAAAACAGCACCAGTTG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR GCA 90 bp | GGCATGATTCATTTGATTGTCAGCAATAAATCCATGCTTCATGACATGGAGGTTGACGATTGTGGCCACTaGTGTATGTTCTCTGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: GMIHLIVSNKSMLHDMEVDDCGH*CMFSAA Trigger: AGCAGCAGAGAACATACAGCAGTGGCCACAATCGTC...AACCTCCATGTCATGAAGCATGGATTTATTGCTGACAATCAAATGAATCATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144188.2 |
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| 3UTR-3UTR TCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCCACAGTGGCATCTTCTaGATCTCCAACTGTTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HNNSSQLICMDILIKKDVHSGIF*ISNCFS Trigger: AGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTG...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR GCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCTCCAACTGTTTCTCTTaGTTTACCATCCTAGTGCAA | + |
|
Preference number: 2 (lower is better) Translates to: HNNSSQLICMDILIKKDVSNCFS*FTILVQ Trigger: TTGCACTAGGATGGTAAAGCAAGAGAAACAGTTGGA...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR CCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCCAGAACAATTTCCCATaGGGTTACCTAATTAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HNNSSQLICMDILIKKDVQNNFP*GYLIKR Trigger: CCTTTTAATTAGGTAACCCCATGGGAAATTGTTCTG...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR CCA 72 bp | AGCGAGCTCCCTCAGTGCGCACGGGACGGCACTGCATaGCTGCATGGAAGGCAGTCACACTGCCTCCGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SELPQCARDGTA*LHGRQSHCLRQ Trigger: CTGTCGGAGGCAGTGTGACTGCCTTCCATGCAGCCATGCAGTGCCGTCCCGTGCGCACTGAGGGAGCTCGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR GCA 72 bp | AGCTCCCTCAGTGCGCACGGGACGGCACTGCATGGCTaGATGGAAGGCAGTCACACTGCCTCCGACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SSLSAHGTALHG*MEGSHTASDRR Trigger: TCTCCTGTCGGAGGCAGTGTGACTGCCTTCCATGCAGCCATGCAGTGCCGTCCCGTGCGCACTGAGGGAGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR CCA 72 bp | CCCTCAGTGCGCACGGGACGGCACTGCATGGCTGCATaGAAGGCAGTCACACTGCCTCCGACAGGAGACCAA | + |
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Preference number: 3 (lower is better) Translates to: PSVRTGRHCMAA*KAVTLPPTGDQ Trigger: TTGGTCTCCTGTCGGAGGCAGTGTGACTGCCTTCCATGCAGCCATGCAGTGCCGTCCCGTGCGCACTGAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR GCA 72 bp | GACGGCACTGCATGGCTGCATGGAAGGCAGTCACACTaGCTCCGACAGGAGACCAACTGGTGCTGTTTTGAA | + |
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Preference number: 3 (lower is better) Translates to: DGTAWLHGRQSH*LRQETNWCCFE Trigger: TTCAAAACAGCACCAGTTGGTCTCCTGTCGGAGGCAGTGTGACTGCCTTCCATGCAGCCATGCAGTGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR CCA 72 bp | GGAAGGCAGTCACACTGCCTCCGACAGGAGACCAACTaGTGCTGTTTTGAACTTGTAACACAACTGATGCAG | + |
|
Preference number: 3 (lower is better) Translates to: GRQSHCLRQETN*CCFELVTQLMQ Trigger: CTGCATCAGTTGTGTTACAAGTTCAAAACAGCACCAGTTGGTCTCCTGTCGGAGGCAGTGTGACTGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR TCA 72 bp | CCTAAACTGGGAAAACAAGCACTAAAACCATTCACTTaGAAAGGAACAGCGAGCTCCCTCAGTGCGCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: PKLGKQALKPFT*KGTASSLSAHG Trigger: CCCGTGCGCACTGAGGGAGCTCGCTGTTCCTTTTCAAGTGAATGGTTTTAGTGCTTGTTTTCCCAGTTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR CCA 72 bp | ATTGAGGTGATGTTATTCAACCACAGTGCTTGGAGCTaGAATAAAAAGCTATCCGTGCCAGTAGTGAAACCA | + |
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Preference number: 3 (lower is better) Translates to: IEVMLFNHSAWS*NKKLSVPVVKP Trigger: TGGTTTCACTACTGGCACGGATAGCTTTTTATTCCAGCTCCAAGCACTGTGGTTGAATAACATCACCTCAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR CCA 72 bp | AAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTaGAGAAAACCCAACCACGAATATGTGCATAAAACA | + |
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Preference number: 3 (lower is better) Translates to: KAIRASSETTFC*RKPNHEYVHKT Trigger: TGTTTTATGCACATATTCGTGGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| 3UTR-3UTR CAA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCCAGGCTAAAACCAAATaGAGGACATCACTAAAGTTG | + |
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Preference number: 3 (lower is better) Translates to: HNNSSQLICMDILIKKDVQAKTK*RTSLKL Trigger: CAACTTTAGTGATGTCCTCAATTTGGTTTTAGCCTG...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCAAGGAGGCCGAGTAACTaGCGCCGCCTCCACAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPRRPSN*RRLHSP Trigger: GGGGCTGTGGAGGCGGCGGCAGTTACTCGGCCTCCT...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTAGGAGGCCGAGTAACTaGCGCCGCCTCCACAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIRRPSN*RRLHSP Trigger: GGGGCTGTGGAGGCGGCGGCAGTTACTCGGCCTCCT...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTTACGGCAGTTCAGAGTaGACCACGGGCAGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFYGSSE*TTGSAG Trigger: ACCTGCACTGCCCGTGGTGCACTCTGAACTGCCGTA...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTTACGGCAGTTCAGAGTaGACCACGGGCAGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIYGSSE*TTGSAG Trigger: ACCTGCACTGCCCGTGGTGCACTCTGAACTGCCGTA...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCAGACGATTGTGGCCACTaGTGTATGTTCTCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPDDCGH*CMFSAA Trigger: AGCAGCAGAGAACATACAGCAGTGGCCACAATCGTC...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR CCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTAGTGCAGGTCGTCTCTaGCTTCTGTCTGTTGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFSAGRL*LLSVVL Trigger: CAAGACAACAGACAGAAGCCAGAGACGACCTGCACT...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR TCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACTGATGAAGGCTCTCTaGATTTCTAGTGGCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPLMKAL*ISSGKR Trigger: CCTCTTGCCACTAGAAATTCAGAGAGCCTTCATCAG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGAGCTATTTCTTCATTTaGAGGGGTCGCAGATTCTCC | + |
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Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLSYFFI*RGRRFS Trigger: GGAGAATCTGCGACCCCTTCAAATGAAGAAATAGCT...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TTGATTGTCAGCAATAAATCCATGCTTCATGACATGGAGGTTCCACAGCTTCATTACGGCAGTTCAGAGTaGACCACGGGCAGTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LIVSNKSMLHDMEVPQLHYGSSE*TTGSAG Trigger: ACCTGCACTGCCCGTGGTGCACTCTGAACTGCCGTA...ATGAAGCTGTGGAACCTCCATGTCATGAAGCATGGATTTATTGCTGACAATCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144188.2 |
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| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTGACGATTGTGGCCACTaGTGTATGTTCTCTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIDDCGH*CMFSAA Trigger: AGCAGCAGAGAACATACAGCAGTGGCCACAATCGTC...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGAAACTCCGACATGCTTaGTTTTGTTCTTTTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLKLRHA*FCSFWP Trigger: AGGCCAAAAAGAACAAAAGCAAGCATGTCGGAGTTT...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR CCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTAGTGCAGGTCGTCTCTaGCTTCTGTCTGTTGTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCSAGRL*LLSVVL Trigger: CAAGACAACAGACAGAAGCCAGAGACGACCTGCACT...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR TCA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCTGTGCAGACAAGCTATaGGATTCTTGCTCTCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KKLSVPVVKPLSVGENPTCADKL*DSCSPF Trigger: GAAAGGAGAGCAAGAATCTCATAGCTTGTCTGCACA...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000017692.15 |
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| CDS-3UTR TCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGATAACACTCATTGATTaGAACATCTATCCTAGCACC | + |
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Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLITLID*NIYPST Trigger: GGTGCTAGGATAGATGTTTCAATCAATGAGTGTTAT...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGGTGCAAAAATATTGGTaGGATAAGATTTCGAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLVQKYW*DKISSS Trigger: CGAACTCGAAATCTTATCGCACCAATATTTTTGCAC...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACCGGTAAATGTAAGTTaGAAATGTGCAGACAAGCTA | + |
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Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPPVNVS*KCADKL Trigger: TAGCTTGTCTGCACATTTGCAACTTACATTTACCGG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017692.15 |
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| CDS-3UTR GCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTAACAGCAATAGTTTGTaGAGGTTTAACAGAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFNSNSL*RFNRTR Trigger: CCTGGTTCTGTTAAACCTGCACAAACTATTGCTGTT...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCATCAGCAATAAATCCATaGTTCATGACATGGAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPSAINP*FMTWRF Trigger: GAACCTCCATGTCATGAAGCATGGATTTATTGCTGA...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCCTTTTTCTAGTTTTTaGTGCATTTCTCGGAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFPFSSF*CISRSL Trigger: CAAGCTCCGAGAAATGCAGCAAAAACTAGAAAAAGG...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR GCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGTGTAAGTTGCAAATGTaGAGACAAGCTTTTGATGCT | + |
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Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLCKLQM*RQAFDA Trigger: AGCATCAAAAGCTTGTCTGCACATTTGCAACTTACA...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACCGGTAAATGTAAGTTaGAAATGTGCAGACAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPPVNVS*KCADKL Trigger: AAGCTTGTCTGCACATTTGCAACTTACATTTACCGG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTTCTATATATCTGTGTTaGTTTCTCAAAGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFSIYLC*FLKGLE Trigger: CTCCAGGCCTTTGAGAAACCAACACAGATATATAGA...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTAGGGACTTGTCTTATTaGACAACTTACATCCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFRDLSY*TTYILP Trigger: AGGAAGGATGTAAGTTGTCCAATAAGACAAGTCCCT...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTTTCTCTCAGCCATTCTaGATCTTTCTCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: LHSETPSPQWHLLNLQLFFSQPF*IFLIFT Trigger: AGTGAAGATGAGAAAGATCCAGAATGGCTGAGAGAA...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCACTGGAAGTTCTTCACTaGCATCAATATTTTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPLEVLH*HQYFHW Trigger: CCAATGAAAATATTGATGTCAGTGAAGAACTTCCAG...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCATCCTGAGGATTTCCTaGATAGGAGCCATCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: KKLSVPVVKPLSVGENPTILRIS*IGAIIT Trigger: TGTTATGATGGCTCCTATGCAGGAAATCCTCAGGAT...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTATCCTGAGGATTTCCTaGATAGGAGCCATCATAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIILRIS*IGAIIT Trigger: TGTTATGATGGCTCCTATGCAGGAAATCCTCAGGAT...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGGGCTTATCATTTTTGTaGAAGAAACCGGTAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: SETPSPQWHLLNLQLFLLGLSFL*KKPVNV Trigger: TACATTTACCGGTTTCTTCCACAAAAATGATAAGCC...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCAACAGCAATAGTTTGTaGAGGTTTAACAGAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKLSVPVVKPLSVGENPTNSNSL*RFNRTR Trigger: CCTGGTTCTGTTAAACCTGCACAAACTATTGCTGTT...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTAAACTCCGACATGCTTaGTTTTGTTCTTTTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIKLRHA*FCSFWP Trigger: AGGCCAAAAAGAACAAAAGCAAGCATGTCGGAGTTT...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | CTTCCATTTCTTGTGGCCGAAGAGGTAAGCAGGTATCACTGTGGAAATAGAGACCAAGAAACTCCGACATaGTTGCTTTTGTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLVAEEVSRYHCGNRDQETPT*LLLFFL Trigger: CAAAAAGAACAAAAGCAAGCATGTCGGAGTTTCTTG...GTCTCTATTTCCACAGTGATACCTGCTTACCTCTTCGGCCACAAGAAATGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144188.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTTCAGCAATAAATCCATaGTTCATGACATGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMISAINP*FMTWRF Trigger: GAACCTCCATGTCATGAAGCATGGATTTATTGCTGA...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCCCTTTTTCTAGTTTTTaGTGCATTTCTCGGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKLSVPVVKPLSVGENPTPFSSF*CISRSL Trigger: CAAGCTCCGAGAAATGCAGCAAAAACTAGAAAAAGG...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCTTGTGGCCGAAGAGGTAAGCAGGTATCACTGTGGAAATAGAGACGATAAACTCCGACATGCTTaGTTTTGTTCTTTTTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: PFLVAEEVSRYHCGNRDDKLRHA*FCSFWL Trigger: TAGCCAAAAAGAACAAAAGCAAGCATGTCGGAGTTT...ATCGTCTCTATTTCCACAGTGATACCTGCTTACCTCTTCGGCCACAAGAAATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000144188.2 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCAGGCTTATCATTTTTGTaGAAGAAACCGGTAAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: QRKQGVTSSGLHSETPSPGLSFL*KKPVNV Trigger: TACATTTACCGGTTTCTTCCACAAAAATGATAAGCC...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTGGAAACTGCCAGGGATaGAAAATTTCCTGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCGNCQG*KISWFC Trigger: ACAAAACCAGGAAATTTTCCATCCCTGGCAGTTTCC...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCCTGGAAGTTCTTCACTaGCATCAATATTTTCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKLSVPVVKPLSVGENPTLEVLH*HQYFHW Trigger: CCAATGAAAATATTGATGTCAGTGAAGAACTTCCAG...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTGTGCAAAAATATTGGTaGGATAAGATTTCGAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMIVQKYW*DKISSS Trigger: CGAACTCGAAATCTTATCGCACCAATATTTTTGCAC...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTTTCTCTCAGCCATTCTaGATCTTTCTCATCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCFSQPF*IFLIFT Trigger: AGTGAAGATGAGAAAGATCCAGAATGGCTGAGAGAA...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR GCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTCAAGAAACTCCGACATaGTTGCTTTTGTTCTTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCQETPT*LLLFFL Trigger: CAAAAAGAACAAAAGCAAGCATGTCGGAGTTTCTTG...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTAAATTCTCTTCTTCCTaGACGAGTTACTCTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCKFSSS*TSYSKQ Trigger: CTGTTTAGAGTAACTCGTCCAGGAAGAAGAGAATTT...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTTGCTTTTGTTCTTTTTaGCCTGCAAACAAGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: SVLKSMTSSNTACSQSMICFCSF*PANKNM Trigger: CATATTCTTGTTTGCAGGCCAAAAAGAACAAAAGCA...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCCCATGCTTCATGACATaGAGGTTCCACAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: HNNSSQLICMDILIKKDVPCFMT*RFHSFI Trigger: GATGAAGCTGTGGAACCTCCATGTCATGAAGCATGG...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR TCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCAGCTATTTCTTCATTTaGAGGGGTCGCAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNNSSQLICMDILIKKDVSYFFI*RGRRFS Trigger: GGAGAATCTGCGACCCCTTCAAATGAAGAAATAGCT...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTTGCTTTTGTTCTTTTTaGCCTGCAAACAAGAATATG | + |
|
Preference number: 4 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCCFCSF*PANKNM Trigger: CATATTCTTGTTTGCAGGCCAAAAAGAACAAAAGCA...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| 3UTR CAA 72 bp | TGCTGTTTTGAACTTGTAACACAACTGATGCAGAACTaGCTTTGTAACTTCTCATCCCAGATGCATGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCFELVTQLMQN*LCNFSSQMHDF Trigger: GAAATCATGCATCTGGGATGAGAAGTTACAAAGCAAGTTCTGCATCAGTTGTGTTACAAGTTCAAAACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCGGAAACTGCCAGGGATaGAAAATTTCCTGGTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: HNNSSQLICMDILIKKDVGNCQG*KISWFC Trigger: ACAAAACCAGGAAATTTTCCATCCCTGGCAGTTTCC...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCTCTATATATCTGTGTTaGTTTCTCAAAGGCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HNNSSQLICMDILIKKDVSIYLC*FLKGLE Trigger: CTCCAGGCCTTTGAGAAACCAACACAGATATATAGA...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CCA 90 bp | CACAACAATTCAAGTCAGCTTATCTGTATGGATATTCTAATCAAGAAGGATGTCAAATTCTCTTCTTCCTaGACGAGTTACTCTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: HNNSSQLICMDILIKKDVKFSSS*TSYSKQ Trigger: CTGTTTAGAGTAACTCGTCCAGGAAGAAGAGAATTT...GACATCCTTCTTGATTAGAATATCCATACAGATAAGCTGACTTGAATTGTTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS GCA 90 bp | AGGCCGAGTAACTGCCGCCGCCTCCACAGCCCCCGCCGCCGGATTTaGCGCCCGAAGCCGCCGCCGCCACCGCCGCCGCCGAACCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RPSNCRRLHSPRRRI*RPKPPPPPPPPNPR Trigger: TCGGGGGTTCGGCGGCGGCGGTGGCGGCGGCGGCTTCGGGCGGCAAATCCGGCGGCGGGGGCTGTGGAGGCGGCGGCAGTTACTCGGCCT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGGTTTCTTGCTCTGTTTaGGAACCCCTGAGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: SETPSPQWHLLNLQLFLLVSCSV*EPLRHR Trigger: ACGGTGTCTCAGGGGTTCCAAAACAGAGCAAGAAAC...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | TCCGTGCTGAAATCAATGACATCATCGAACACTGCCTGTTCCCAATCCATGATTCTAGTGGCAAGAGGCTaGGCAACAGGAGCTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVLKSMTSSNTACSQSMILVARG*ATGAVD Trigger: GTCTACAGCTCCTGTTGCCAAGCCTCTTGCCACTAG...AATCATGGATTGGGAACAGGCAGTGTTCGATGATGTCATTGATTTCAGCACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCAGCTGTAGACTTATCGTaGGTTTCTCCTGTCCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: QRKQGVTSSGLHSETPSPAVDLS*VSPVHR Trigger: TCGATGGACAGGAGAAACCAACGATAAGTCTACAGC...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS CCA 90 bp | GTTTACGGCAGTTCAGAGTGCACCACGGGCAGTGCAGGTCGTCTCTaGCTTCTGTCTGTTGTCTTGTATTATTGTTATAAAGGAACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYGSSECTTGSAGRL*LLSVVLYYCYKGTD Trigger: ATCAGTTCCTTTATAACAATAATACAAGACAACAGACAGAAGCCAGAGACGACCTGCACTGCCCGTGGTGCACTCTGAACTGCCGTAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | TTACACTCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTAAAAGCAAATCCAGGTaGGCGATGTATATCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LHSETPSPQWHLLNLQLFKSKSR*AMYILR Trigger: CCTCAGGATATACATCGCCAACCTGGATTTGCTTTT...AAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGAGTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCGTTTCTTGCTCTGTTTaGGAACCCCTGAGACACCGT | + |
|
Preference number: 5 (lower is better) Translates to: KKLSVPVVKPLSVGENPTVSCSV*EPLRHR Trigger: ACGGTGTCTCAGGGGTTCCAAAACAGAGCAAGAAAC...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS TCA 90 bp | TGCAGGTTTAACAGAACCAGGCTTATTTTCCTGATGAAGGCTCTCTaGATTTCTAGTGGCAAGAGGCTTGGCAACAGGAGCTGTAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: CRFNRTRLIFLMKAL*ISSGKRLGNRSCRL Trigger: AAGTCTACAGCTCCTGTTGCCAAGCCTCTTGCCACTAGAAATTCAGAGAGCCTTCATCAGGAAAATAAGCCTGGTTCTGTTAAACCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGATCTATATATCTGTGTaGGTTTCTCAAAGGCCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SETPSPQWHLLNLQLFLLIYISV*VSQRPG Trigger: TCCAGGCCTTTGAGAAACCAACACAGATATATAGAT...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | TCAGAGACACCCTCCCCACAGTGGCATCTTCTGAATCTCCAACTGTTTCTCTTGTGCATTTCTCGGAGCTaGGTAACAGCTTTATCTATT | + |
|
Preference number: 5 (lower is better) Translates to: SETPSPQWHLLNLQLFLLCISRS*VTALSI Trigger: AATAGATAAAGCTGTTACCAAGCTCCGAGAAATGCA...CAAGAGAAACAGTTGGAGATTCAGAAGATGCCACTGTGGGGAGGGTGTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTGCTGTAGACTTATCGTaGGTTTCTCCTGTCCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCAVDLS*VSPVHR Trigger: TCGATGGACAGGAGAAACCAACGATAAGTCTACAGC...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGGAAACAAGGTGTGACATCTTCTGGTTTACACTCAGAGACACCCTCCCCAGATGGCTTATCATTTTaGTGGAAGAAACCGGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QRKQGVTSSGLHSETPSPDGLSF*WKKPVN Trigger: ATTTACCGGTTTCTTCCACAAAAATGATAAGCCATC...TGGGGAGGGTGTCTCTGAGTGTAAACCAGAAGATGTCACACCTTGTTTCCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS-3UTR CAA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTAAAAGCAAATCCAGGTaGGCGATGTATATCCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCKSKSR*AMYILR Trigger: CCTCAGGATATACATCGCCAACCTGGATTTGCTTTT...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS TCA 90 bp | TTGGTTTCTCCTGTCCATCGAAGAGTAAATTGTAATGTAGGTCCCTaGGAAAATGTCTCAAATGGAGGCAGCCTCTTCCCATCAAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: LVSPVHRRVNCNVGP*ENVSNGGSLFPSRI Trigger: AATTCTTGATGGGAAGAGGCTGCCTCCATTTGAGACATTTTCTCAGGGACCTACATTACAATTTACTCTTCGATGGACAGGAGAAACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
||
| CDS TCA 90 bp | GAAGAAACCGGTAAATGTAAGTTGCAAATGTGCAGACAAGAGTGCTaGACAGACACAGTTCTACCAATCGCAATGGGTCTCTATGAGATT | + |
|
Preference number: 5 (lower is better) Translates to: EETGKCKLQMCRQEC*TDTVLPIAMGLYEI Trigger: AATCTCATAGAGACCCATTGCGATTGGTAGAACTGTGTCTGTTCAGCACTCTTGTCTGCACATTTGCAACTTACATTTACCGGTTTCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126091.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCGATGGCTTATCATTTTaGTGGAAGAAACCGGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: KKLSVPVVKPLSVGENPTDGLSF*WKKPVN Trigger: ATTTACCGGTTTCTTCCACAAAAATGATAAGCCATC...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR CAA 90 bp | AAAAAGCTATCCGTGCCAGTAGTGAAACCACTTTCTGTTGGAGAAAACCCAACCACAGGCATGATTCATTaGATTGTCAGCAATAAATCC | + |
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Preference number: 5 (lower is better) Translates to: KKLSVPVVKPLSVGENPTTGMIH*IVSNKS Trigger: GGATTTATTGCTGACAATCAAATGAATCATGCCTGT...GGTTGGGTTTTCTCCAACAGAAAGTGGTTTCACTACTGGCACGGATAGCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS-3UTR CAA 90 bp | AAACCAAAACTCTTCCTAGAGGCTGAATTCCCTAGAAGCAACTTCAGTGTCTGTTGCATTTCTCGGAGCTaGGTAACAGCTTTATCTATT | + |
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Preference number: 5 (lower is better) Translates to: KPKLFLEAEFPRSNFSVCCISRS*VTALSI Trigger: AATAGATAAAGCTGTTACCAAGCTCCGAGAAATGCA...ACAGACACTGAAGTTGCTTCTAGGGAATTCAGCCTCTAGGAAGAGTTTTGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS TCA 90 bp | ATCCTGAGGATTTCCTGCATAGGAGCCATCATAACACTCATTGATTaGAACATCTATCCTAGCACCTTTTGGATGATATACGTAATTGAA | + |
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Preference number: 5 (lower is better) Translates to: ILRISCIGAIITLID*NIYPSTFWMIYVIE Trigger: TTCAATTACGTATATCATCCAAAAGGTGCTAGGATAGATGTTTCAATCAATGAGTGTTATGATGGCTCCTATGCAGGAAATCCTCAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS GCA 72 bp | TACAGTTTACGGCAGTTCAGAGTGCACCACGGGCAGTaGAGGTCGTCTCTGGCTTCTGTCTGTTGTCTTGTA | + |
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Preference number: 6 (lower is better) Translates to: YSLRQFRVHHGQ*RSSLASVCCLV Trigger: TACAAGACAACAGACAGAAGCCAGAGACGACCTGCACTGCCCGTGGTGCACTCTGAACTGCCGTAAACTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS TCA 72 bp | AACAGAACCAGGCTTATTTTCCTGATGAAGGCTCTCTaGATTTCTAGTGGCAAGAGGCTTGGCAACAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: NRTRLIFLMKAL*ISSGKRLGNRS Trigger: GCTCCTGTTGCCAAGCCTCTTGCCACTAGAAATTCAGAGAGCCTTCATCAGGAAAATAAGCCTGGTTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 90 bp | TTTCTAGTGGCAAGAGGCTTGGCAACAGGAGCTGTAGACTTATCGTaGGTTTCTCCTGTCCATCGAAGAGTAAATTGTAATGTAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: FLVARGLATGAVDLS*VSPVHRRVNCNVGP Trigger: GGGACCTACATTACAATTTACTCTTCGATGGACAGGAGAAACCAACGATAAGTCTACAGCTCCTGTTGCCAAGCCTCTTGCCACTAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 90 bp | AGGTGTTCTCTTTACCGGTCCATTTCGACTAAAAGCAAATCCAGGTaGGCGATGTATATCCTGAGGATTTCCTGCATAGGAGCCATCATA | + |
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Preference number: 6 (lower is better) Translates to: RCSLYRSISTKSKSR*AMYILRISCIGAII Trigger: TATGATGGCTCCTATGCAGGAAATCCTCAGGATATACATCGCCAACCTGGATTTGCTTTTAGTCGAAATGGACCGGTAAAGAGAACACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 72 bp | GCAAGAGGCTTGGCAACAGGAGCTGTAGACTTATCGTaGGTTTCTCCTGTCCATCGAAGAGTAAATTGTAAT | + |
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Preference number: 6 (lower is better) Translates to: ARGLATGAVDLS*VSPVHRRVNCN Trigger: ATTACAATTTACTCTTCGATGGACAGGAGAAACCAACGATAAGTCTACAGCTCCTGTTGCCAAGCCTCTTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 72 bp | CTTTACCGGTCCATTTCGACTAAAAGCAAATCCAGGTaGGCGATGTATATCCTGAGGATTTCCTGCATAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYRSISTKSKSR*AMYILRISCIG Trigger: TCCTATGCAGGAAATCCTCAGGATATACATCGCCAACCTGGATTTGCTTTTAGTCGAAATGGACCGGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 72 bp | TTGAAGATGAACCTGCTGTGGCAGAGCTTTAGATGTTaGAGTAAGCTATACAGTTTACGGCAGTTCAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: LKMNLLWQSFRC*SKLYSLRQFRV Trigger: CACTCTGAACTGCCGTAAACTGTATAGCTTACTCAAACATCTAAAGCTCTGCCACAGCAGGTTCATCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000017692.15 ENSMUST00000144188.2 ENSMUST00000163272.2 |
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| CDS GCA 72 bp | CCACTTCTCCATCTTCAGATTCAAGAAACTCCGACATaGTTGCTTTTGTTCTTTTTGGCCTGCAAACAAGAA | + |
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Preference number: 6 (lower is better) Translates to: PLLHLQIQETPT*LLLFFLACKQE Trigger: TTCTTGTTTGCAGGCCAAAAAGAACAAAAGCAAGCATGTCGGAGTTTCTTGAATCTGAAGATGGAGAAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS GCA 72 bp | TTCTCCATCTTCAGATTCAAGAAACTCCGACATGCTTaGTTTTGTTCTTTTTGGCCTGCAAACAAGAATATG | + |
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Preference number: 6 (lower is better) Translates to: FSIFRFKKLRHA*FCSFWPANKNM Trigger: CATATTCTTGTTTGCAGGCCAAAAAGAACAAAAGCAAGCATGTCGGAGTTTCTTGAATCTGAAGATGGAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS TCA 72 bp | ATTTCCTGCATAGGAGCCATCATAACACTCATTGATTaGAACATCTATCCTAGCACCTTTTGGATGATATAC | + |
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Preference number: 6 (lower is better) Translates to: ISCIGAIITLID*NIYPSTFWMIY Trigger: GTATATCATCCAAAAGGTGCTAGGATAGATGTTTCAATCAATGAGTGTTATGATGGCTCCTATGCAGGAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 90 bp | GTCGCAGATTCTCCTTTTTCTAGTTTTTGCTGCATTTCTCGGAGCTaGGTAACAGCTTTATCTATTGACATTATGCTAATAAGATTAAAG | + |
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Preference number: 6 (lower is better) Translates to: VADSPFSSFCCISRS*VTALSIDIMLIRLK Trigger: CTTTAATCTTATTAGCATAATGTCAATAGATAAAGCTGTTACCAAGCTCCGAGAAATGCAGCAAAAACTAGAAAAAGGAGAATCTGCGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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| CDS CAA 72 bp | TCTCCTTTTTCTAGTTTTTGCTGCATTTCTCGGAGCTaGGTAACAGCTTTATCTATTGACATTATGCTAATA | + |
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Preference number: 6 (lower is better) Translates to: SPFSSFCCISRS*VTALSIDIMLI Trigger: TATTAGCATAATGTCAATAGATAAAGCTGTTACCAAGCTCCGAGAAATGCAGCAAAAACTAGAAAAAGGAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000017692.15 ENSMUST00000163272.2 |
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