Pregenerated sensors for SUV39H2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026646Ensembl transcript IDs: ENSMUST00000027956.9, ENSMUST00000060618.13, ENSMUST00000100458.4, ENSMUST00000127540.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATaGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATG | + |
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Preference number: 1 (lower is better) Translates to: RTSHSLSGSLCLALQ*ALLVTVLCVQRSTM Trigger: CATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR GCA 90 bp | GTAAGCCAAGAAGCAGCGTTAGCTTTCCTACATGGTTCCAGCCTCTaGTCAAGTTCCTGTCATGATTATTTCCAAGGACATGTTGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: VSQEAALAFLHGSSL*SSSCHDYFQGHVAE Trigger: TTCAGCAACATGTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAGGAAAGCTAACGCTGCTTCTTGGCTTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 90 bp | ATTCGGAAATCTTTGGGTAGCAGACATACTACAAGGCCTCAAATATaGACACTGAATACTATGTACTGTGAACAGCAGCCCCATGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: IRKSLGSRHTTRPQI*TLNTMYCEQQPHEG Trigger: GCCTTCATGGGGCTGCTGTTCACAGTACATAGTATTCAGTGTGCATATTTGAGGCCTTGTAGTATGTCTGCTACCCAAAGATTTCCGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR CCA 90 bp | GATTGTATATACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTaGGAAAAAGTAACCTCATTTGAGAAACTGGCTCCATCAAAATTG | + |
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Preference number: 1 (lower is better) Translates to: DCIYLLIQLDKPRVT*EKVTSFEKLAPSKL Trigger: CAATTTTGATGGAGCCAGTTTCTCAAATGAGGTTACTTTTTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTATATACAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR TCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCGGACCTCCCACTCGCTaGGTGGCTCACTCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: VRTSHSLSGSLCLALQWAGPPTR*VAHSAW Trigger: CCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCC...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | GCGGGGTCTAGCTCACTGTGGGCAGTACCATTCCTAGGCAGAGGGGCCTGGGCTGAGAATAATTCAAGGTaGGCTTGGCCAAGGGGTTGT | + |
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Preference number: 2 (lower is better) Translates to: AGSSSLWAVPFLGRGAWAENNSR*AWPRGC Trigger: ACAACCCCTTGGCCAAGCTCACCTTGAATTATTCTC...AGCCCAGGCCCCTCTGCCTAGGAATGGTACTGCCCACAGTGAGCTAGACCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR TCA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTGGTCAAAGAGGTAGGTaGTCCCTTTGTTGTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPGQRGR*SLCCHR Trigger: TCTATGACAACAAAGGGATCACCTACCTCTTTGACC...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCTTCAAAGAAGCACAATaGCCAGCCACTATAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: VRTSHSLSGSLCLALQWAFKEAQ*PATIDF Trigger: GAAGTCTATAGTGGCTGGCCATTGTGCTTCTTTGAA...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCATGCCTGGCACTCCAATaGGCCCTCCTAGTCACTGTT | + |
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Preference number: 2 (lower is better) Translates to: TPAQMRYSVRTSHSLSGSCLALQ*ALLVTV Trigger: AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCA...TGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGGCTGATCCCGGGAGCTaGCCTGTACTCGTTAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LSGSLCLALQWALLVTVLADPGS*PVLVNV Trigger: TACATTAACGAGTACAGGCCAGCTCCCGGGATCAGC...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCTTTGGGTCACAACTATaGTTCACAAAATGGGATACG | + |
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Preference number: 2 (lower is better) Translates to: VRTSHSLSGSLCLALQWAFGSQL*FTKWDT Trigger: CGTATCCCATTTTGTGAATCATAGTTGTGACCCAAA...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCTTCAAAGAAGCACAATaGCCAGCCACTATAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SADLPLAEWLTLPGTPMGFKEAQ*PATIDF Trigger: GAAGTCTATAGTGGCTGGCCATTGTGCTTCTTTGAA...GCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCACAAGGCCTCAAATATaGACACTGAATACTATGTAC | + |
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Preference number: 2 (lower is better) Translates to: VRTSHSLSGSLCLALQWATRPQI*TLNTMY Trigger: GTACATAGTATTCAGTGTGCATATTTGAGGCCTTGT...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR CCA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTTTCAAAGAAGCACAATaGCCAGCCACTATAGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SLSGSLCLALQWALLVTVFKEAQ*PATIDF Trigger: GAAGTCTATAGTGGCTGGCCATTGTGCTTCTTTGAA...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGTAGGTGATCCCTTTGTTGTCATAGAACTGTCCCCGTCTCTCGGCCTCTTCATCGACACCTTGAGTTaGATTCGTAGATGGGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: EVGDPFVVIELSPSLGLFIDTLS*IRRWEC Trigger: GCACTCCCATCTACGAATGCAACTCAAGGTGTCGAT...GAAGAGGCCGAGAGACGGGGACAGTTCTATGACAACAAAGGGATCACCTACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCTACTTGGCAATGACTTaGGCCATGAACTGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: AQMRYSVRTSHSLSGSLCYLAMT*AMNCIL Trigger: TAATATACAGTTCATGGCTCAAGTCATTGCCAAGTA...GCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACGTTTCCATATCGAGCTaGATCCACTGTGAACTCATC | + |
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Preference number: 2 (lower is better) Translates to: WALLVTVLCVQRSTMASHVSISS*IHCELI Trigger: GATGAGTTCACAGTGGATGCAGCTCGATATGGAAAC...GTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGTACTTGGCAATGACTTaGGCCATGAACTGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: SHSCSDEILSADLPLAEWYLAMT*AMNCIL Trigger: TAATATACAGTTCATGGCTCAAGTCATTGCCAAGTA...CCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGTGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | ACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCATACTTGGCAATGACTTaGGCCATGAACTGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: TPAQMRYSVRTSHSLSGSYLAMT*AMNCIL Trigger: TAATATACAGTTCATGGCTCAAGTCATTGCCAAGTA...TGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGAATATCATCCCCTTATaGTTCTTTCTTCTGTTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SHSCSDEILSADLPLAEWNIIPL*FFLLLR Trigger: CCTCAACAGAAGAAAGAACCATAAGGGGATGATATT...CCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | TTATACATAGTTCACTTTCCATTTAACCACCAAATATCTACCGTTTATGTGCCCGTGGCTCACTCTGCCTaGCACTCCAATGGGCCCTCC | + |
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Preference number: 2 (lower is better) Translates to: LYIVHFPFNHQISTVYVPVAHSA*HSNGPS Trigger: GGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCAC...GGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGTGAACTATGTATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | AGACACACACACCCCGAAGCTTTTAGAGTCCATGCTCGAGCACTCTGCTGTATGTACTTGGCAATGACTTaGGCCATGAACTGTATATTA | + |
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Preference number: 2 (lower is better) Translates to: RHTHPEAFRVHARALCCMYLAMT*AMNCIL Trigger: TAATATACAGTTCATGGCTCAAGTCATTGCCAAGTA...CATACAGCAGAGTGCTCGAGCATGGACTCTAAAAGCTTCGGGGTGTGTGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAAACTGGCTCCATCAAAATTGGCCTGTGGCATGTCTGTGGGGATTTCCTGTGTGGCACTCAGAGTaGAGTCTGTTTGTGTTTAAA | + |
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Preference number: 2 (lower is better) Translates to: LRNWLHQNWPVACLWGFPVWHSE*SLFVFK Trigger: TTTAAACACAAACAGACTTCACTCTGAGTGCCACAC...AGGAAATCCCCACAGACATGCCACAGGCCAATTTTGATGGAGCCAGTTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR CCA 90 bp | TTATACATAGTTCACTTTCCATTTAACCACCAAATATCTACCGTTTATGTGCCCCTCCCACTCGCTGAGTaGCTCACTCTGCCTGGCACT | + |
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Preference number: 2 (lower is better) Translates to: LYIVHFPFNHQISTVYVPLPLAE*LTLPGT Trigger: AGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAG...GGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGTGAACTATGTATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGATTGTATATACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTGGGAAATCAAAATTGGCCTGTaGCATGTCTGTGGGGATTTC | + |
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Preference number: 2 (lower is better) Translates to: TDCIYLLIQLDKPRVTWEIKIGL*HVCGDF Trigger: GAAATCCCCACAGACATGCCACAGGCCAATTTTGAT...TTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTATATACAATCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR-3UTR CCA 90 bp | TTATACATAGTTCACTTTCCATTTAACCACCAAATATCTACCGTTTATGTGCCCAGAACAATGCTATCCTaGGCAGCCGAGTATCAAGGT | + |
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Preference number: 2 (lower is better) Translates to: LYIVHFPFNHQISTVYVPRTMLS*AAEYQG Trigger: ACCTTGATACTCGGCTGCCCAGGATAGCATTGTTCT...GGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGTGAACTATGTATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR GCA 90 bp | CCCGCAGTCCTTTTCAGAATAAACAGTAATATACTTGGCAATGACTTGAGCCATTCAGCAATTGCAGGTTaGAAGGATTTTGAATTGACA | + |
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Preference number: 2 (lower is better) Translates to: PAVLFRINSNILGNDLSHSAIAG*KDFELT Trigger: TGTCAATTCAAAATCCTTGCAACCTGCAATTGCTGA...ATGGCTCAAGTCATTGCCAAGTATATTACTGTTTATTCTGAAAAGGACTGCGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGTTTCATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAAGGTTGCAAGGATTTTaGATTGACAGCCTTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: KRFHSNCGSLTFQTLKGIRLQGF*IDSLAF Trigger: AAATGCAAGGCTGTCAATTCAAAATCCTTGCAACCT...TATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATGAAACCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR CCA 72 bp | GATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTaGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: DEILSADLPLAE*LTLPGTPMGPP Trigger: AGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CAA 90 bp | AGACACACACACCCCGAAGCTTTTAGAGTCCATGCTCGAGCACTCTGCTGTATGAGCTTGGCCAAGGGGTaGTTAGGGGGTGGGACGGGG | + |
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Preference number: 3 (lower is better) Translates to: RHTHPEAFRVHARALCCMSLAKG*LGGGTG Trigger: CCCCGTCCCACCCCCTAACAACCCCTTGGCCAAGCT...CATACAGCAGAGTGCTCGAGCATGGACTCTAAAAGCTTCGGGGTGTGTGTGTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 72 bp | GTCATCGGGGCTTGTGTCCCTCACGGATCTCACTCCTaGTCAGATGAGATACTCAGTGCGGACCTCCCACTC | + |
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Preference number: 3 (lower is better) Translates to: VIGACVPHGSHS*SDEILSADLPL Trigger: GAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGTGAGATCCGTGAGGGACACAAGCCCCGATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR-3UTR CAA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCCCCAACCACAGCCATaGCTAGTTCTAAAGATGCAC | + |
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Preference number: 3 (lower is better) Translates to: SLSGSLCLALQWALLVTVPQPQP*LVLKMH Trigger: GTGCATCTTTAGAACTAGCAATGGCTGTGGTTGGGG...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR CCA 72 bp | TGTTTGTGTTTAAAGGTAAAAATCTCCAGGCTGGCATaGTGGCACGTGTCTGCAATCCCAGCGCTGGGCCGT | + |
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Preference number: 3 (lower is better) Translates to: CLCLKVKISRLA*WHVSAIPALGR Trigger: ACGGCCCAGCGCTGGGATTGCAGACACGTGCCACCATGCCAGCCTGGAGATTTTTACCTTTAAACACAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 72 bp | GAAGCAGCGTTAGCTTTCCTACATGGTTCCAGCCTCTaGTCAAGTTCCTGTCATGATTATTTCCAAGGACAT | + |
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Preference number: 3 (lower is better) Translates to: EAALAFLHGSSL*SSSCHDYFQGH Trigger: ATGTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAGGAAAGCTAACGCTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 72 bp | TCTTTGGGTAGCAGACATACTACAAGGCCTCAAATATaGACACTGAATACTATGTACTGTGAACAGCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: SLGSRHTTRPQI*TLNTMYCEQQP Trigger: GGGCTGCTGTTCACAGTACATAGTATTCAGTGTGCATATTTGAGGCCTTGTAGTATGTCTGCTACCCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR CCA 72 bp | TACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTaGGAAAAAGTAACCTCATTTGAGAAACTGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: YLLIQLDKPRVT*EKVTSFEKLAP Trigger: TGGAGCCAGTTTCTCAAATGAGGTTACTTTTTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 72 bp | TTAGCTTTCTGTACAATATACTCAGCAATTGCAGGTTaGAAGGATTTTGAATTGACAGCCTTGCATTTCCTT | + |
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Preference number: 3 (lower is better) Translates to: LAFCTIYSAIAG*KDFELTALHFL Trigger: AAGGAAATGCAAGGCTGTCAATTCAAAATCCTTGCAACCTGCAATTGCTGAGTATATTGTACAGAAAGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127540.2 |
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| 3UTR-3UTR CAA 90 bp | AAAAGGTTTCATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATACTTTATTTGCTGCATTaGTTTTGTCTTCACAGTGGA | + |
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Preference number: 3 (lower is better) Translates to: KRFHSNCGSLTFQTLKGILYLLH*FCLHSG Trigger: TCCACTGTGAAGACAAAACAAATGCAGCAAATAAAG...TATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATGAAACCTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR GCA 72 bp | ACTTTCCATTTAACCACCAAATATCTACCGTTTATGTaGCCCGCAGTCCTTTTCAGAATAAACAGTAATATA | + |
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Preference number: 3 (lower is better) Translates to: TFHLTTKYLPFM*PAVLFRINSNI Trigger: TATATTACTGTTTATTCTGAAAAGGACTGCGGGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| 3UTR TCA 72 bp | CCACTTTATAAAGCTTTAATCTATGAAACCATACTTTaGGGTAGGCATGAAACTAAGGCACAAAGGTTAGTT | + |
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Preference number: 3 (lower is better) Translates to: PLYKALIYETIL*GRHETKAQRLV Trigger: AACTAACCTTTGTGCCTTAGTTTCATGCCTACCTCAAAGTATGGTTTCATAGATTAAAGCTTTATAAAGTGG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR TCA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTGGACCTGGAGCCCGGTaGCACCGCGCTCCTGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPGPGAR*HRAPAS Trigger: TGAGGCAGGAGCGCGGTGTCACCGGGCTCCAGGTCC...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
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| CDS-3UTR CCA 90 bp | AGTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCTGCCGCAGGAGCTGTaGACACCTGAGGTTTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: SADLPLAEWLTLPGTPMGLPQEL*TPEVSQ Trigger: TTGAGAAACCTCAGGTGTCCACAGCTCCTGCGGCAG...GCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| CDS-3UTR TCA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTGTGGTCAATGGAGTCTaGAGATGCTTCTCCAGAACC | + |
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Preference number: 4 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPVVNGV*RCFSRT Trigger: GGTTCTGGAGAAGCATCTTCAGACTCCATTGACCAC...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR CCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCAGAACAATGCTATCCTaGGCAGCCGAGTATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRTSHSLSGSLCLALQWARTMLS*AAEYQG Trigger: ACCTTGATACTCGGCTGCCCAGGATAGCATTGTTCT...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGGTGTCACCATCTGGGTaGAGCGGAGGAAAGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLCLALQWALLVTVLVSPSG*SGGKSW Trigger: CCAGCTCTTTCCTCCGCTCCACCCAGATGGTGACAC...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100458.4 |
||
| CDS-3UTR GCA 90 bp | GTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCGTTTCCATATCGAGCTaGATCCACTGTGAACTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VRTSHSLSGSLCLALQWAVSISS*IHCELI Trigger: GATGAGTTCACAGTGGATGCAGCTCGATATGGAAAC...GGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | CTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACTATAGAGTCTCGCCGTTCGCCTaGCCTTGGGCCTCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLVTVLCVQRSTMASHYRVSPFA*PWASGA Trigger: CGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGAC...TCTATAGTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
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| CDS-3UTR CCA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGCCGCAGGAGCTGTaGACACCTGAGGTTTCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSGSLCLALQWALLVTVLPQEL*TPEVSQ Trigger: TTGAGAAACCTCAGGTGTCCACAGCTCCTGCGGCAG...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 ENSMUST00000127540.2 |
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| CDS-3UTR CCA 90 bp | AGTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCTTTTTGGCAGGGCTGTaGTCAATGGAGTCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SADLPLAEWLTLPGTPMGFLAGL*SMESED Trigger: ATCTTCAGACTCCATTGACCACAGCCCTGCCAAAAA...GCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR TCA 90 bp | CTACATGGTTCCAGCCTCTGCTCAAGTTCCTGTCATGATTATTTCCAAGGACATGGACCTGGAGCCCGGTaGCACCGCGCTCCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LHGSSLCSSSCHDYFQGHGPGAR*HRAPAS Trigger: TGAGGCAGGAGCGCGGTGTCACCGGGCTCCAGGTCC...ATGTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGGTGGTCAATGGAGTCTaGAGATGCTTCTCCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLCLALQWALLVTVLVVNGV*RCFSRT Trigger: GGTTCTGGAGAAGCATCTTCAGACTCCATTGACCAC...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | ACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCAGCTGATCCCGGGAGCTaGCCTGTACTCGTTAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TPAQMRYSVRTSHSLSGSADPGS*PVLVNV Trigger: TACATTAACGAGTACAGGCCAGCTCCCGGGATCAGC...TGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS-3UTR TCA 90 bp | TGGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACCTTCACTGTTTATGCTaGTCCCGGGAGCTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WALLVTVLCVQRSTMASHLHCLC*SRELAC Trigger: ACAGGCCAGCTCCCGGGATCAGCATAAACAGTGAAG...GTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS-3UTR GCA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTATCGACACCTTGAGTTaGATTCGTAGATGGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSGSLCLALQWALLVTVIDTLS*IRRWEC Trigger: GCACTCCCATCTACGAATGCAACTCAAGGTGTCGAT...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTAAACACCTGAAGATTTaGGTCACAACTATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPKHLKI*VTTMIH Trigger: GTGAATCATAGTTGTGACCCAAATCTTCAGGTGTTT...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR TCA 90 bp | TCTCACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGGGTCAAAGAGGTAGGTaGTCCCTTTGTTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHSCSDEILSADLPLAEWGQRGR*SLCCHR Trigger: TCTATGACAACAAAGGGATCACCTACCTCTTTGACC...CCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACAATAGTGTCACCATCTaGGTGGAGCGGAGGAAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WALLVTVLCVQRSTMASHNSVTI*VERRKE Trigger: CTCTTTCCTCCGCTCCACCCAGATGGTGACACTATT...GTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100458.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGAAACTGGCTCCATCAAAATTGGCCTGTGGCATGTCTGTGGGGATTTCCTCTTCACTGTTTATGCTaGTCCCGGGAGCTGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRNWLHQNWPVACLWGFPLHCLC*SRELAC Trigger: ACAGGCCAGCTCCCGGGATCAGCATAAACAGTGAAG...AGGAAATCCCCACAGACATGCCACAGGCCAATTTTGATGGAGCCAGTTTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
||
| CDS-3UTR TCA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTTTTGGGTCACAACTATaGTTCACAAAATGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: SLSGSLCLALQWALLVTVFGSQL*FTKWDT Trigger: CGTATCCCATTTTGTGAATCATAGTTGTGACCCAAA...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | CATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAATTGTCTATGTCTCGCCGTTCGCCTaGCCTTGGGCCTCGGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HSNCGSLTFQTLKGIIVYVSPFA*PWASGA Trigger: CGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGAC...ATAGACAATTATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACAGAACAATGCTATCCTaGGCAGCCGAGTATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WALLVTVLCVQRSTMASHRTMLS*AAEYQG Trigger: ACCTTGATACTCGGCTGCCCAGGATAGCATTGTTCT...GTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS-3UTR TCA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGAAAACACTAAACACCTaGAGATTTGGGTCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLCLALQWALLVTVLKTLNT*RFGSQL Trigger: TAGTTGTGACCCAAATCTTCAGGTGTTTAGTGTTTT...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR GCA 90 bp | GCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCTCAGCAATTGCAGGTTaGAAGGATTTTGAATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AQMRYSVRTSHSLSGSLCSAIAG*KDFELT Trigger: TGTCAATTCAAAATCCTTGCAACCTGCAATTGCTGA...GCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
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| CDS-3UTR CCA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGAATATCATCCCCTTATaGTTCTTTCTTCTGTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGSLCLALQWALLVTVLNIIPL*FFLLLR Trigger: CCTCAACAGAAGAAAGAACCATAAGGGGATGATATT...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
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| CDS-3UTR CCA 90 bp | TGGGCCCTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACTTTTTGGCAGGGCTGTaGTCAATGGAGTCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WALLVTVLCVQRSTMASHFLAGL*SMESED Trigger: ATCTTCAGACTCCATTGACCACAGCCCTGCCAAAAA...GTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAGGGCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR TCA 90 bp | ACTGATTGTATATACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTGGGAAGCACACACCAGGCCTTaGATAAGGCACCTCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDCIYLLIQLDKPRVTWEAHTRP*IRHLVH Trigger: GTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGC...TTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTATATACAATCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR CCA 90 bp | ACTCCTGCTCAGATGAGATACTCAGTGCGGACCTCCCACTCGCTGAGTGGCTCAAAACACCTGAAGATTTaGGTCACAACTATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPAQMRYSVRTSHSLSGSKHLKI*VTTMIH Trigger: GTGAATCATAGTTGTGACCCAAATCTTCAGGTGTTT...TGAGCCACTCAGCGAGTGGGAGGTCCGCACTGAGTATCTCATCTGAGCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR TCA 90 bp | CATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAATTGTCTATGCACACACCAGGCCTTaGATAAGGCACCTCGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSNCGSLTFQTLKGIIVYAHTRP*IRHLVH Trigger: GTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGC...ATAGACAATTATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
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| CDS-3UTR TCA 90 bp | CTACATGGTTCCAGCCTCTGCTCAAGTTCCTGTCATGATTATTTCCAAGGACATGGTCAAAGAGGTAGGTaGTCCCTTTGTTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LHGSSLCSSSCHDYFQGHGQRGR*SLCCHR Trigger: TCTATGACAACAAAGGGATCACCTACCTCTTTGACC...ATGTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR GCA 90 bp | ACTGATTGTATATACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTGGGAAATCGACACCTTGAGTTaGATTCGTAGATGGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDCIYLLIQLDKPRVTWEIDTLS*IRRWEC Trigger: GCACTCCCATCTACGAATGCAACTCAAGGTGTCGAT...TTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTATATACAATCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR CCA 90 bp | AACAGCAGCCCCATGAAGGTGATTTTGAGTAATACTGTAGCTTCTCTCAAACCAAGAACAATGCTATCCTaGGCAGCCGAGTATCAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NSSPMKVILSNTVASLKPRTMLS*AAEYQG Trigger: ACCTTGATACTCGGCTGCCCAGGATAGCATTGTTCT...TGGTTTGAGAGAAGCTACAGTATTACTCAAAATCACCTTCATGGGGCTGCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR CAA 72 bp | GACCATTACATGTGTGGCACTCAGAGTGAAGTCTGTTaGTGTTTAAAGGTAAAAATCTCCAGGCTGGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: DHYMCGTQSEVC*CLKVKISRLAW Trigger: CCATGCCAGCCTGGAGATTTTTACCTTTAAACACAAACAGACTTCACTCTGAGTGCCACACATGTAATGGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR CCA 90 bp | ACTGATTGTATATACCTTCTCATACAACTTGACAAGCCTAGGGTCACCTGGGAATTTTTGGCAGGGCTGTaGTCAATGGAGTCTGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TDCIYLLIQLDKPRVTWEFLAGL*SMESED Trigger: ATCTTCAGACTCCATTGACCACAGCCCTGCCAAAAA...TTCCCAGGTGACCCTAGGCTTGTCAAGTTGTATGAGAAGGTATATACAATCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| 3UTR CAA 72 bp | AAAGTAACCTCATTTGAGAAACTGGCTCCATCAAAATaGGCCTGTGGCATGTCTGTGGGGATTTCCTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: KVTSFEKLAPSK*ACGMSVGISLI Trigger: AATTAAGGAAATCCCCACAGACATGCCACAGGCCAATTTTGATGGAGCCAGTTTCTCAAATGAGGTTACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
||
| CDS-3UTR TCA 90 bp | CCCGCAGTCCTTTTCAGAATAAACAGTAATATACTTGGCAATGACTTGAGCCATTTTGGGTCACAACTATaGTTCACAAAATGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: PAVLFRINSNILGNDLSHFGSQL*FTKWDT Trigger: CGTATCCCATTTTGTGAATCATAGTTGTGACCCAAA...ATGGCTCAAGTCATTGCCAAGTATATTACTGTTTATTCTGAAAAGGACTGCGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR TCA 90 bp | TTATACATAGTTCACTTTCCATTTAACCACCAAATATCTACCGTTTATGTGCCCGGTCAAAGAGGTAGGTaGTCCCTTTGTTGTCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYIVHFPFNHQISTVYVPGQRGR*SLCCHR Trigger: TCTATGACAACAAAGGGATCACCTACCTCTTTGACC...GGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGTGAACTATGTATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR TCA 90 bp | CCCGCAGTCCTTTTCAGAATAAACAGTAATATACTTGGCAATGACTTGAGCCATAAAACACTAAACACCTaGAGATTTGGGTCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: PAVLFRINSNILGNDLSHKTLNT*RFGSQL Trigger: TAGTTGTGACCCAAATCTTCAGGTGTTTAGTGTTTT...ATGGCTCAAGTCATTGCCAAGTATATTACTGTTTATTCTGAAAAGGACTGCGGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
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| CDS-3UTR TCA 90 bp | CATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAATTGTCTATAGGTTGCAAGGATTTTaGATTGACAGCCTTGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: HSNCGSLTFQTLKGIIVYRLQGF*IDSLAF Trigger: AAATGCAAGGCTGTCAATTCAAAATCCTTGCAACCT...ATAGACAATTATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS-3UTR GCA 90 bp | CATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAATTGTCTATACTTGTGATCACCTTTaGTACCTTGTAGTCACACAA | + |
|
Preference number: 4 (lower is better) Translates to: HSNCGSLTFQTLKGIIVYTCDHL*YLVVTQ Trigger: TTGTGTGACTACAAGGTAGCAAAGGTGATCACAAGT...ATAGACAATTATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060618.13 |
||
| CDS-3UTR GCA 90 bp | TTATACATAGTTCACTTTCCATTTAACCACCAAATATCTACCGTTTATGTGCCCTCAGCAATTGCAGGTTaGAAGGATTTTGAATTGACA | + |
|
Preference number: 4 (lower is better) Translates to: LYIVHFPFNHQISTVYVPSAIAG*KDFELT Trigger: TGTCAATTCAAAATCCTTGCAACCTGCAATTGCTGA...GGGCACATAAACGGTAGATATTTGGTGGTTAAATGGAAAGTGAACTATGTATAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS-3UTR CCA 90 bp | CATAGTAACTGTGGTAGCCTCACTTTTCAAACACTAAAGGGAATAATTGTCTATAAACACCTGAAGATTTaGGTCACAACTATGATTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HSNCGSLTFQTLKGIIVYKHLKI*VTTMIH Trigger: GTGAATCATAGTTGTGACCCAAATCTTCAGGTGTTT...ATAGACAATTATTCCCTTTAGTGTTTGAAAAGTGAGGCTACCACAGTTACTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000100458.4 |
||
| CDS CCA 90 bp | CCGTCAGGGTCTCCGCGCGGCGGCGTCTCGCCGTTCGCCTGGCCTTaGGCCTCGGGGGCGGACCTGGAGCCCGGTGACACCGCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSGSPRGGVSPFAWP*ASGADLEPGDTALL Trigger: CAGGAGCGCGGTGTCACCGGGCTCCAGGTCCGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGACGCCGCCGCGCGGAGACCCTGACGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
||
| CDS TCA 90 bp | GCCGTTCGCCTGGCCTTGGGCCTCGGGGGCGGACCTGGAGCCCGGTaGCACCGCGCTCCTGCCTCACTGCCCCGTGCCTTGGCCCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVRLALGLGGGPGAR*HRAPASLPRALALA Trigger: GGCCAGGGCCAAGGCACGGGGCAGTGAGGCAGGAGCGCGGTGTCACCGGGCTCCAGGTCCGCCCCCGAGGCCCAAGGCCAGGCGAACGGC 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
||
| CDS-3UTR CAA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTGGCACACACCAGGCCTaGAATAAGGCACCTCGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPGTHQA*NKAPRA Trigger: TGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCC...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
||
| CDS-3UTR CAA 90 bp | GCGGACCTCCCACTCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTGTCCACATCGACACCTaGAGTTGCATTCGTAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: ADLPLAEWLTLPGTPMGPVHIDT*SCIRRW Trigger: CCATCTACGAATGCAACTCAAGGTGTCGATGTGGAC...AGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGAGTGGGAGGTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
||
| CDS TCA 90 bp | CCTGGAGAGTATCAAGTGAAACTAGGCAAGGCACACACCAGGCCTTaGATAAGGCACCTCGTGCACACTCGTCGCCAAAGACCGCGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PGEYQVKLGKAHTRP*IRHLVHTRRQRPRP Trigger: GGGCCGCGGTCTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCCTTGCCTAGTTTCACTTGATACTCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
||
| CDS-3UTR CAA 90 bp | CTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTCTGCCCCAACCACAGCCATaGCTAGTTCTAAAGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: LSGSLCLALQWALLVTVLPQPQP*LVLKMH Trigger: GTGCATCTTTAGAACTAGCAATGGCTGTGGTTGGGG...CAGAACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
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| CDS-3UTR CAA 90 bp | TCGCTGAGTGGCTCACTCTGCCTGGCACTCCAATGGGCCCTCCTAGTCACTGTTAATATTCCACACCCTTaGCTACCTTGTAGTCACACA | + |
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Preference number: 5 (lower is better) Translates to: SLSGSLCLALQWALLVTVNIPHP*LPCSHT Trigger: TGTGTGACTACAAGGTAGCAAAGGGTGTGGAATATT...AACAGTGACTAGGAGGGCCCATTGGAGTGCCAGGCAGAGTGAGCCACTCAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR CAA 90 bp | CTCCTAGTCACTGTTCTGTGTGTTCAAAGAAGCACAATGGCCAGCCACTATAGAGGCACACACCAGGCCTaGAATAAGGCACCTCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: LLVTVLCVQRSTMASHYRGTHQA*NKAPRA Trigger: TGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCC...TCTATAGTGGCTGGCCATTGTGCTTCTTTGAACACACAGAACAGTGACTAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
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| CDS-3UTR CAA 90 bp | CTACATGGTTCCAGCCTCTGCTCAAGTTCCTGTCATGATTATTTCCAAGGACATCCCCAACCACAGCCATaGCTAGTTCTAAAGATGCAC | + |
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Preference number: 5 (lower is better) Translates to: LHGSSLCSSSCHDYFQGHPQPQP*LVLKMH Trigger: GTGCATCTTTAGAACTAGCAATGGCTGTGGTTGGGG...ATGTCCTTGGAAATAATCATGACAGGAACTTGAGCAGAGGCTGGAACCATGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027956.9 |
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| CDS-3UTR CAA 90 bp | CCCGCAGTCCTTTTCAGAATAAACAGTAATATACTTGGCAATGACTTGAGCCATGTCCACATCGACACCTaGAGTTGCATTCGTAGATGG | + |
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Preference number: 5 (lower is better) Translates to: PAVLFRINSNILGNDLSHVHIDT*SCIRRW Trigger: CCATCTACGAATGCAACTCAAGGTGTCGATGTGGAC...ATGGCTCAAGTCATTGCCAAGTATATTACTGTTTATTCTGAAAAGGACTGCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000100458.4 |
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| CDS GCA 72 bp | CGGGGGCGGACCTGGAGCCCGGTGACACCGCGCTCCTaGCTCACTGCCCCGTGCCTTGGCCCTGGCCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: RGRTWSPVTPRS*LTAPCLGPGRR Trigger: GCGGCGGCCAGGGCCAAGGCACGGGGCAGTGAGGCAGGAGCGCGGTGTCACCGGGCTCCAGGTCCGCCCCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
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| CDS CCA 72 bp | TCTCCGCGCGGCGGCGTCTCGCCGTTCGCCTGGCCTTaGGCCTCGGGGGCGGACCTGGAGCCCGGTGACACC | + |
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Preference number: 6 (lower is better) Translates to: SPRGGVSPFAWP*ASGADLEPGDT Trigger: GGTGTCACCGGGCTCCAGGTCCGCCCCCGAGGCCCAAGGCCAGGCGAACGGCGAGACGCCGCCGCGCGGAGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 ENSMUST00000127540.2 |
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| CDS CAA 90 bp | TCCTGGAGAGTATCAAGTGAAACTAGGCAAGGCACACACCAGGCCTaGAATAAGGCACCTCGTGCACACTCGTCGCCAAAGACCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: SWRVSSETRQGTHQA*NKAPRAHSSPKTAA Trigger: GGCCGCGGTCTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCCTTGCCTAGTTTCACTTGATACTCTCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
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| CDS CAA 72 bp | GTATCAAGTGAAACTAGGCAAGGCACACACCAGGCCTaGAATAAGGCACCTCGTGCACACTCGTCGCCAAAG | + |
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Preference number: 6 (lower is better) Translates to: VSSETRQGTHQA*NKAPRAHSSPK Trigger: CTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCCTTGCCTAGTTTCACTTGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
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| CDS TCA 72 bp | TATCAAGTGAAACTAGGCAAGGCACACACCAGGCCTTaGATAAGGCACCTCGTGCACACTCGTCGCCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: YQVKLGKAHTRP*IRHLVHTRRQR Trigger: TCTTTGGCGACGAGTGTGCACGAGGTGCCTTATTCAAGGCCTGGTGTGTGCCTTGCCTAGTTTCACTTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000027956.9 ENSMUST00000060618.13 |
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| CDS CCA 72 bp | ATAGTGTCACCATCTGGGTGGAGCGGAGGAAAGAGCTaGAGAACAACCTTTTCATTCCAGAAGGCTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: IVSPSGWSGGKS*RTTFSFQKALH Trigger: GTGCAAAGCCTTCTGGAATGAAAAGGTTGTTCTCCAGCTCTTTCCTCCGCTCCACCCAGATGGTGACACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100458.4 |
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