Pregenerated sensors for SUSD5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000086596Ensembl transcript IDs: ENSMUST00000135338.3
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGCCGATCTCAAGTGAGACAGGGCGTGGACAGTTCTCTCCTCCCTaGCTCCAGGCCTTCCTGGGTTCCAAGATCACCACAGATGACAGA | + |
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Preference number: 1 (lower is better) Translates to: MPISSETGRGQFSPP*LQAFLGSKITTDDR Trigger: TCTGTCATCTGTGGTGATCTTGGAACCCAGGAAGGCCTGGAGTCAGGGAGGAGAGAACTGTCCACGCCCTGTCTCACTTGAGATCGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | CCAGAGGTGACACTTTACATGATGCTGTGGGATGCCGATCTCAAGTaGGACAGGGCGTGGACAGTTCTCTCCTCCCTGACTCCAGGCCTT | + |
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Preference number: 1 (lower is better) Translates to: PEVTLYMMLWDADLK*DRAWTVLSSLTPGL Trigger: AAGGCCTGGAGTCAGGGAGGAGAGAACTGTCCACGCCCTGTCTCACTTGAGATCGGCATCCCACAGCATCATGTAAAGTGTCACCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | AGCTACACCCCAGCCTTCTATTGGAATGGGGTCAAAGCAGAGATCTaGGATTCGGGCAATGAATTCCAGGGCAGCTGGTTGAGGAGACCT | + |
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Preference number: 1 (lower is better) Translates to: SYTPAFYWNGVKAEI*DSGNEFQGSWLRRP Trigger: AGGTCTCCTCAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAAGGCTGGGGTGTAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | AAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGGGCAGCTGGTTaGGGAGACCTTGACATGTGTGATGACGTCACCAACCCTTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: KQRSGIRAMNSRAAG*GDLDMCDDVTNPLG Trigger: GCCTAAAGGGTTGGTGACGTCATCACACATGTCAAGGTCTCCTCAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | TCCTCCCTGACTCCAGGCCTTCCTGGGTTCCAAGATCACCACAGATaGCAGAGGCCAACTAACATCAATACCCATCAGAACTACCTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSLTPGLPGFQDHHR*QRPTNINTHQNYLK Trigger: CTTCAGGTAGTTCTGATGGGTATTGATGTTAGTTGGCCTCTGTCATCTGTGGTGATCTTGGAACCCAGGAAGGCCTGGAGTCAGGGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | CTTCTATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATaGATTCCAGGGCAGCTGGTTGAGGAGACCTTGACATGTGTGATG | + |
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Preference number: 1 (lower is better) Translates to: LLLEWGQSRDLGFGQ*IPGQLVEETLTCVM Trigger: CATCACACATGTCAAGGTCTCCTCAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | CATTACCATTCTGAAAGCTTTTGCAATGACAGCTTAGGTTCCTGGTaGGCCAGTGACCCATGTATGCCCTTCCGACGAGCAGTCCTCATG | + |
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Preference number: 1 (lower is better) Translates to: HYHSESFCNDSLGSW*ASDPCMPFRRAVLM Trigger: CATGAGGACTGCTCGTCGGAAGGGCATACATGGGTCACTGGCTCACCAGGAACCTAAGCTGTCATTGCAAAAGCTTTCAGAATGGTAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | ACACCGTTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTaGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTC | + |
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Preference number: 1 (lower is better) Translates to: TPLRRHSVVTVISNG*DGSAQGHHIHVYSL Trigger: GAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAACGGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | ATTCAGATAGAAACCCATGGTGTGCTTACTTCTGAGCTAACACCCTaGAGTCAGCCAGAGGTGACACTTTACATGATGCTGTGGGATGCC | + |
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Preference number: 1 (lower is better) Translates to: IQIETHGVLTSELTP*SQPEVTLYMMLWDA Trigger: GGCATCCCACAGCATCATGTAAAGTGTCACCTCTGGCTGACTCCAGGGTGTTAGCTCAGAAGTAAGCACACCATGGGTTTCTATCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | GTTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATaGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: VETPLSGHCYKQWLG*ISPGTSYSCLFALY Trigger: GTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | TTTAGGCACCCCCAGAGACACTTCTCAGCATATAGAAGAAAGATTTaGACTCTAGAGGGTGAAGCCTTATCCGACTCAGATCCCGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: FRHPQRHFSAYRRKI*TLEGEALSDSDPGN Trigger: ATTCCCGGGATCTGAGTCGGATAAGGCTTCACCCTCTAGAGTTCAAATCTTTCTTCTATATGCTGAGAAGTGTCTCTGGGGGTGCCTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | AGAAACACCGTTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATaGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTC | + |
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Preference number: 1 (lower is better) Translates to: RNTVETPLSGHCYKQ*LGWISPGTSYSCLF Trigger: GAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAACGGTGTTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 90 bp | GACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATaGTCCATGGGATTTTGTATTGTATTATACTGTTCCGTAGCTATT | + |
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Preference number: 1 (lower is better) Translates to: DVSSLVPLGLRVTQL*SMGFCIVLYCSVAI Trigger: AATAGCTACGGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 90 bp | TACTGTTCCGTAGCTATTGACAATAACCTGTTGCTTTCTAACACGTaGATCAGGCAGGTGACAGCACAGAAAATATATTGTGAGACCTTT | + |
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Preference number: 1 (lower is better) Translates to: YCSVAIDNNLLLSNT*IRQVTAQKIYCETF Trigger: AAAGGTCTCACAATATATTTTCTGTGCTGTCACCTGCCTGATTCACGTGTTAGAAAGCAACAGGTTATTGTCAATAGCTACGGAACAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATGGTCGAACTACCTGAAGACTaGGCTCAGGGCTGGCTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SRRVLSGPLGPSCNPVMVELPED*AQGWLS Trigger: GCTGAGCCAGCCCTGAGCTCAGTCTTCAGGTAGTTC...GACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | AACACCCTGGAGTCAGCCAGAGGTGACACTTTACATGATGCTGTGGGATGCCGACTCGGAGCTGCTCTGTaGGAGCCCGTGCTGATAGAG | + |
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Preference number: 2 (lower is better) Translates to: NTLESARGDTLHDAVGCRLGAAL*EPVLIE Trigger: CTCTATCAGCACGGGCTCTCACAGAGCAGCTCCGAG...TCGGCATCCCACAGCATCATGTAAAGTGTCACCTCTGGCTGACTCCAGGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CAA 90 bp | CCCCAGGTGATGTGCCCCTGGTTGGATGACTGTCTAGAAACACCGTaGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: PQVMCPWLDDCLETP*RRHSVVTVISNGWD Trigger: ATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAACGGTGTTTCTAGACAGTCATCCAACCAGGGGCACATCACCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CAA 90 bp | TCCCTCTCTCTTCCCTCTGGAGCAGACGTGTCCTCTCTGGTCCCCTaGGGCCTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATT | + |
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Preference number: 2 (lower is better) Translates to: SLSLPSGADVSSLVP*GLRVTQLWSMGFCI Trigger: AATACAAAATCCCATGGACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCTCCAGAGGGAAGAGAGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAGAACTGGGTTTCACTaGCAGCCCTGGAGTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTRTGFH*QPWSVE Trigger: CTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCT...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | ATACCACACCCAGAGATTGAACCCCAGGACCTGATACCTGCTAGACCGTCCACCCCACCAACAAAAATGTaGGTCAGGATTTCTGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: IPHPEIEPQDLIPARPSTPPTKM*VRISGA Trigger: GGCACCAGAAATCCTGACCCACATTTTTGTTGGTGG...GGTGGACGGTCTAGCAGGTATCAGGTCCTGGGGTTCAATCTCTGGGTGTGGTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATCCAGGGCAGCTGGTTaGGGAGACCTTGACATGTGT | + |
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Preference number: 2 (lower is better) Translates to: WISPGTSYSCLFALYQVGSRAAG*GDLDMC Trigger: ACACATGTCAAGGTCTCCTCAACCAGCTGCCCTGGA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCCCACAACTCCCCAGGTaGTGTGCCCCTGGTTGGATG | + |
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Preference number: 2 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSPQLPR*CAPGWM Trigger: CATCCAACCAGGGGCACATCACCTGGGGAGTTGTGG...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATTTCACTGCCAGCCCTaGAGTGTGGAGTTTGTGATT | + |
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Preference number: 2 (lower is better) Translates to: WISPGTSYSCLFALYQVGFHCQP*SVEFVI Trigger: AATCACAAACTCCACACTCCAGGGCTGGCAGTGAAA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATAACCACACCCAGAGATTaGACCCCAGGACCTGATACC | + |
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Preference number: 2 (lower is better) Translates to: GLISYLHHPCMETKVIYITTPRD*TPGPDT Trigger: GGTATCAGGTCCTGGGGTTCAATCTCTGGGTGTGGT...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCCAGGTGATGTGCCCCTaGTTGGATGACTGTCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSQVMCP*LDDCLE Trigger: TTCTAGACAGTCATCCAACCAGGGGCACATCACCTG...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATAAAGCAATGGCTGGGATaGATCAGCCCAGGGACATCA | + |
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Preference number: 2 (lower is better) Translates to: GLISYLHHPCMETKVIYIKQWLG*ISPGTS Trigger: TGATGTCCCTGGGCTGATCCATCCCAGCCATTGCTT...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGAATCATTCCTTCTTCCTaGAGTTCAGAGAAACAGTTA | + |
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Preference number: 2 (lower is better) Translates to: WISPGTSYSCLFALYQVGIIPSS*SSEKQL Trigger: TAACTGTTTCTCTGAACTCCAGGAAGAAGGAATGAT...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCGTGGGTCAGGATTTCTaGTGCCATATAAAAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSVGQDF*CHIKTD Trigger: GTCTGTTTTTATATGGCACCAGAAATCCTGACCCAC...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR GCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCGGTCAGGATTTCTGGTaGCATATAAAAACAGACACT | + |
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Preference number: 2 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSGQDFW*HIKTDT Trigger: AGTGTCTGTTTTTATATGGCACCAGAAATCCTGACC...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CAA 90 bp | AAAATAGAAATGCCATCTCACAAGAGATTCAAATCCGATTTAAAATaGTACAGTCTCTGTGTTTACTCCGTCGAGTTCTTCTTTGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: KIEMPSHKRFKSDLK*YSLCVYSVEFFFGY Trigger: GTAGCCAAAGAAGAACTCGACGGAGTAAACACAGAGACTGTACAATTTTAAATCGGATTTGAATCTCTTGTGAGATGGCATTTCTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR TCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATATATAGAAGAAAGATTTaGACTCTAGAGGGTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLISYLHHPCMETKVIYIYRRKI*TLEGEA Trigger: GGCTTCACCCTCTAGAGTTCAAATCTTTCTTCTATA...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | GTGGACAGTTCTCTCCTCCCTGACTCCAGGCCTTCCTaGGTTCCAAGATCACCACAGATGACAGAGGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: VDSSLLPDSRPS*VPRSPQMTEAN Trigger: GTTGGCCTCTGTCATCTGTGGTGATCTTGGAACCCAGGAAGGCCTGGAGTCAGGGAGGAGAGAACTGTCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | GCCACATCTTCCACAACTCCCCAGGTGATGTGCCCCTaGTTGGATGACTGTCTAGAAACACCGTTGAGACGC | + |
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Preference number: 3 (lower is better) Translates to: ATSSTTPQVMCP*LDDCLETPLRR Trigger: GCGTCTCAACGGTGTTTCTAGACAGTCATCCAACCAGGGGCACATCACCTGGGGAGTTGTGGAAGATGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | GGGTCATACCACACCCAGAGATTGAACCCCAGGACCTaGTACCTGCTAGACCGTCCACCTGTGTTTCAACTG | + |
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Preference number: 3 (lower is better) Translates to: GSYHTQRLNPRT*YLLDRPPVFQL Trigger: CAGTTGAAACACAGGTGGACGGTCTAGCAGGTATCAGGTCCTGGGGTTCAATCTCTGGGTGTGGTATGACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | TCTGGGATTCGGGCAATGAATTCCAGGGCAGCTGGTTaGGGAGACCTTGACATGTGTGATGACGTCACCAAC | + |
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Preference number: 3 (lower is better) Translates to: SGIRAMNSRAAG*GDLDMCDDVTN Trigger: GTTGGTGACGTCATCACACATGTCAAGGTCTCCTCAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | GAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATaGATTCCAGGGCAGCTGGTTGAGGAGACCTTGACA | + |
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Preference number: 3 (lower is better) Translates to: EWGQSRDLGFGQ*IPGQLVEETLT Trigger: TGTCAAGGTCTCCTCAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | ACACTTTACATGATGCTGTGGGATGCCGATCTCAAGTaGGACAGGGCGTGGACAGTTCTCTCCTCCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: TLYMMLWDADLK*DRAWTVLSSLT Trigger: AGTCAGGGAGGAGAGAACTGTCCACGCCCTGTCTCACTTGAGATCGGCATCCCACAGCATCATGTAAAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | CCAGCCTTCTATTGGAATGGGGTCAAAGCAGAGATCTaGGATTCGGGCAATGAATTCCAGGGCAGCTGGTTG | + |
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Preference number: 3 (lower is better) Translates to: PAFYWNGVKAEI*DSGNEFQGSWL Trigger: CAACCAGCTGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCCACCCCAGCCTTCTATaGGAATGGGGTCAAAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTHPSLL*EWGQSR Trigger: TCTGCTTTGACCCCATTCCAATAGAAGGCTGGGGTG...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | TCTGAAAGCTTTTGCAATGACAGCTTAGGTTCCTGGTaGGCCAGTGACCCATGTATGCCCTTCCGACGAGCA | + |
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Preference number: 3 (lower is better) Translates to: SESFCNDSLGSW*ASDPCMPFRRA Trigger: TGCTCGTCGGAAGGGCATACATGGGTCACTGGCTCACCAGGAACCTAAGCTGTCATTGCAAAAGCTTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR TCA 72 bp | ACTCCAGGCCTTCCTGGGTTCCAAGATCACCACAGATaGCAGAGGCCAACTAACATCAATACCCATCAGAAC | + |
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Preference number: 3 (lower is better) Translates to: TPGLPGFQDHHR*QRPTNINTHQN Trigger: GTTCTGATGGGTATTGATGTTAGTTGGCCTCTGTCATCTGTGGTGATCTTGGAACCCAGGAAGGCCTGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR GCA 72 bp | GCTACCACCAACAAAAATGTGGGTCAGGATTTCTGGTaGCATATAAAAACAGACACTCCCGTGGTGCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ATTNKNVGQDFW*HIKTDTPVVPQ Trigger: CTGAGGCACCACGGGAGTGTCTGTTTTTATATGGCACCAGAAATCCTGACCCACATTTTTGTTGGTGGTAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CAA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATATCCTCTCTGGTCCCCTaGGGCCTTCGTGTAACCCAG | + |
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Preference number: 3 (lower is better) Translates to: GLISYLHHPCMETKVIYISSLVP*GLRVTQ Trigger: CTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGA...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR GCA 72 bp | GTGACCCATGTATGCCCTTCCGACGAGCAGTCCTCATaGTCTTCCATATTAATTAAGATGACAGCAAATTGG | + |
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Preference number: 3 (lower is better) Translates to: VTHVCPSDEQSS*SSILIKMTANW Trigger: CCAATTTGCTGTCATCTTAATTAATATGGAAGAGCATGAGGACTGCTCGTCGGAAGGGCATACATGGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | CCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATaGATCAGCCCAGGGACATCATATTCATGTTTATTC | + |
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Preference number: 3 (lower is better) Translates to: PLSGHCYKQWLG*ISPGTSYSCLF Trigger: GAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | AAAGCTACCACCAACAAAAATGTGGGTCAGGATTTCTaGTGCCATATAAAAACAGACACTCCCGTGGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: KATTNKNVGQDF*CHIKTDTPVVP Trigger: AGGCACCACGGGAGTGTCTGTTTTTATATGGCACCAGAAATCCTGACCCACATTTTTGTTGGTGGTAGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR-3UTR CAA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCCTGGTTGAGGAGACCTaGACATGTGTGATGACGTCA | + |
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Preference number: 3 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSLVEET*TCVMTS Trigger: TGACGTCATCACACATGTCAAGGTCTCCTCAACCAG...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| 3UTR CCA 72 bp | GTACAGTCTCTGTGTTTACTCCGTCGAGTTCTTCTTTaGCTACATACAGAAAACATCTTCTTTCTTCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VQSLCLLRRVLL*LHTENIFFLPS Trigger: AGAGGGAAGAAAGAAGATGTTTTCTGTATGTAGCCAAAGAAGAACTCGACGGAGTAAACACAGAGACTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| 3UTR TCA 72 bp | GTAGCTATTGACAATAACCTGTTGCTTTCTAACACGTaGATCAGGCAGGTGACAGCACAGAAAATATATTGT | + |
|
Preference number: 3 (lower is better) Translates to: VAIDNNLLLSNT*IRQVTAQKIYC Trigger: ACAATATATTTTCTGTGCTGTCACCTGCCTGATTCACGTGTTAGAAAGCAACAGGTTATTGTCAATAGCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| 3UTR GCA 72 bp | AGTGTCCTGGGTTTAATTAGTTACTTACACCATCCCTaGATGGAGACAAAGGTTATTTACATAACTAGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SVLGLISYLHHP*METKVIYITSH Trigger: ATGACTAGTTATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACCCAGGACACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | AGCAGACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATGGTCATCGTGGCCAGTCAGTaGGCACACTGCCCCCAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRRVLSGPLGPSCNPVMVIVASQ*AHCPQR Trigger: GCGCTGGGGGCAGTGTGCGCACTGACTGGCCACGAT...GACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | TTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCCCAGGTGGGCACCCCTaGTCCTGCAGGAGAGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LRRHSVVTVISNGWDGSAPGGHP*SCRRAS Trigger: CGAGGCTCTCCTGCAGGAGCAGGGGTGCCCACCTGG...GGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAAACCAAGAACTGGGTTTCACTGCCAGCCCTGGAGTGTGGAGTTTGTGGCAGCAGACACCAGGTaGGCACCCCTGCTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: EEKPRTGFHCQPWSVEFVAADTR*APLLLQ Trigger: CTGCAGGAGCAGGGGTGCCCACCTGGTGTCTGCTGC...CACAAACTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCTTGGTTTCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCCACTGCTGGAGGCTGGGTaGCCTCCACATCAGTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ETPLSGHCYKQWLGWISPLLEAG*PPHQSR Trigger: CCTCGACTGATGTGGAGGCCACCCAGCCTCCAGCAG...TGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| 3UTR CAA 72 bp | CTTCCCTCTGGAGCAGACGTGTCCTCTCTGGTCCCCTaGGGCCTTCGTGTAACCCAGTTATGGTCCATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LPSGADVSSLVP*GLRVTQLWSMG Trigger: TCCCATGGACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCTCCAGAGGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR TCA 90 bp | GAGGAGAAACCAAGAACTGGGTTTCACTGCCAGCCCTGGAGTGTGGAGTTTGTGGTAGACACAGGACGGTaGCCACAGTGGCGATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: EEKPRTGFHCQPWSVEFVVDTGR*PQWRSP Trigger: CGGTGATCGCCACTGTGGTCACCGTCCTGTGTCTAC...CACAAACTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCTTGGTTTCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | AACACCCTGGAGTCAGCCAGAGGTGACACTTTACATGATGCTGTGGGATGCCGACCAGCCAGCCTGTTGTaGACACTGCGGAGGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLESARGDTLHDAVGCRPASLL*TLRRHS Trigger: ACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGG...TCGGCATCCCACAGCATCATGTAAAGTGTCACCTCTGGCTGACTCCAGGGTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | ATACCACACCCAGAGATTGAACCCCAGGACCTGATACCTGCTAGACCGTCCACCTCTCTTGGGTGGAGCTaGCCAGTTCATGGGGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPHPEIEPQDLIPARPSTSLGWS*PVHGVR Trigger: CCTCACCCCATGAACTGGCCAGCTCCACCCAAGAGA...GGTGGACGGTCTAGCAGGTATCAGGTCCTGGGGTTCAATCTCTGGGTGTGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR TCA 90 bp | TTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCGTTCATGGGGTGAGGTaGCCTTGGGTGACGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LRRHSVVTVISNGWDGSAVHGVR*PWVTAV Trigger: CACAGCCGTCACCCAAGGTCACCTCACCCCATGAAC...GGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | AACACCCTGGAGTCAGCCAGAGGTGACACTTTACATGATGCTGTGGGATGCCGATGCGACCCTGGAGGATaGTGTGTGGGAATGACGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NTLESARGDTLHDAVGCRCDPGG*CVGMTV Trigger: CACCGTCATTCCCACACACCATCCTCCAGGGTCGCA...TCGGCATCCCACAGCATCATGTAAAGTGTCACCTCTGGCTGACTCCAGGGTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAAACCAAGAACTGGGTTTCACTGCCAGCCCTGGAGTGTGGAGTTTGTGGAGCTGGCCAGTTCATaGGGTGAGGTGACCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: EEKPRTGFHCQPWSVEFVELASS*GEVTLG Trigger: ACCCAAGGTCACCTCACCCCATGAACTGGCCAGCTC...CACAAACTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCTTGGTTTCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GAGGAGAAACCAAGAACTGGGTTTCACTGCCAGCCCTGGAGTGTGGAGTTTGTGGCACCAGGAACTGGGTaGCTGTCAATTCTCACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EEKPRTGFHCQPWSVEFVAPGTG*LSILTS Trigger: GGACGTGAGAATTGACAGCCACCCAGTTCCTGGTGC...CACAAACTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCTTGGTTTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATGGTCCTTAGCACCAGGAACTaGGTGGCTGTCAATTCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRRVLSGPLGPSCNPVMVLSTRN*VAVNSH Trigger: GTGAGAATTGACAGCCACCCAGTTCCTGGTGCTAAG...GACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCTCACGTCCACAGCTCTaGAGACTGGCTGTTCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRHSVVTVISNGWDGSASRPQL*RLAVHH Trigger: GTGGTGAACAGCCAGTCTCCAGAGCTGTGGACGTGA...GGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCCCCAGCTCTGGCTTGTaGAAAGTCTCGGCCGGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTPSSGL*KVSAGN Trigger: GTTTCCGGCCGAGACTTTCCACAAGCCAGAGCTGGG...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR TCA 90 bp | TTCTATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGGATGGTGTGTGGGAATaGCGGTGGGTCTCCACACGG | + |
|
Preference number: 4 (lower is better) Translates to: FYWNGVKAEIWDSGNEFQDGVWE*RWVSTR Trigger: CCGTGTGGAGACCCACCGTCATTCCCACACACCATC...CTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGAAACTTCTCACTTaGACCAGGCCCAGGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTKKLLT*TRPRAL Trigger: GAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTT...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | ATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGGGCAAAGCCAGTGCGACCCTaGAGGATGGTGTGTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IGMGSKQRSGIRAMNSRAKPVRP*RMVCGN Trigger: ATTCCCACACACCATCCTCCAGGGTCGCACTGGCTT...TGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCCACACATTGATGGGTCCTaGAACCAGAGCTTCTACGTC | + |
|
Preference number: 4 (lower is better) Translates to: ETPLSGHCYKQWLGWISPHIDGS*NQSFYV Trigger: GACGTAGAAGCTCTGGTTCCAGGACCCATCAATGTG...TGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | ATACCACACCCAGAGATTGAACCCCAGGACCTGATACCTGCTAGACCGTCCACCCGTTTATGTGTCGGCTaGAGGGTTGTTGTTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPHPEIEPQDLIPARPSTRLCVG*RVVVTV Trigger: GACAGTAACAACAACCCTCCAGCCGACACATAAACG...GGTGGACGGTCTAGCAGGTATCAGGTCCTGGGGTTCAATCTCTGGGTGTGGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR TCA 90 bp | ATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGGGCATCAGAGGCGTCTTCCTaGGCCTTTTCCTTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: IGMGSKQRSGIRAMNSRASEASS*AFSFSP Trigger: GGGAGAAAAGGAAAAGGCTCAGGAAGACGCCTCTGA...TGCCCTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR TCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATCACCGGGCCTTTCCTaGAGCTGGGACACTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WISPGTSYSCLFALYQVGSPGLS*SWDTHP Trigger: GGGATGAGTGTCCCAGCTTCAGGAAAGGCCCGGTGA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCTTCCTTTTCTCCCTCTaGCCGGGAGTCTTCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTFLFSL*PGVFHE Trigger: CTCATGGAAGACTCCCGGGCAGAGGGAGAAAAGGAA...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TTGAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCGTTGTTACTGTCTCTTaGGTGGAGCTGGCCAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRRHSVVTVISNGWDGSAVVTVS*VELASS Trigger: TGAACTGGCCAGCTCCACCCAAGAGACAGTAACAAC...GGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGACCATCTCCAAGCCAGTaGGACCCTGGAGGATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WISPGTSYSCLFALYQVGPSPSQ*DPGGWC Trigger: ACACCATCCTCCAGGGTCGCACTGGCTTGGAGATGG...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCACACGGTGCCGAGGTTaGAAGAAACTTCTCACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTTRCRG*KKLLTC Trigger: GCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGT...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATCCTCATCATCCTCCTaGCCAGCCTCTACCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WISPGTSYSCLFALYQVGSSSSS*PASTFL Trigger: GAGGAAGGTAGAGGCTGGGCAGGAGGATGATGAGGA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATAGGCTGTCACCCCTGCTaGAGGCTGGGTGGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GLISYLHHPCMETKVIYIGCHPC*RLGGLH Trigger: GTGGAGGCCACCCAGCCTCCAGCAGGGGTGACAGCC...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGAAGGGGCTGTAGGTGGTaGCATAGACCAGCCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WISPGTSYSCLFALYQVGRGCRW*HRPALF Trigger: AAACAAGGCTGGTCTATGCCACCACCTACAGCCCCT...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCTCTTTCCCGCAGGCTTaGACCAGTCCGTACCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSSFPQA*TSPYHS Trigger: GGAGTGGTACGGACTGGTGCAAGCCTGCGGGAAAGA...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATAAGGAATCGTCGCTGCTaGTCACCCCTGGGTCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLISYLHHPCMETKVIYIRNRRC*SPLGPL Trigger: CAGAGGACCCAGGGGTGAGCAGCAGCGACGATTCCT...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATCAACATCCCTGGTATaGGAACTCTCAGTCTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WISPGTSYSCLFALYQVGSTSLV*ELSVSD Trigger: GTCTGAGACTGAGAGTTCCCATACCAGGGATGTTGA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCCTGGGTCCTCTGCCTTaGTGTCATTCCTATCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSLGPLP*CHSYPQ Trigger: TTGTGGATAGGAATGACAGCAAGGCAGAGGACCCAG...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR GCA 90 bp | TCTCACAAGAGATTCAAATCCGATTTAAAATTGTACAGTCTCTGTGTTTACTCCTGTCTAGCCTGCCGCTaGCCAACGTTCAGCTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SHKRFKSDLKLYSLCVYSCLACR*PTFSLY Trigger: ATACAAGCTGAACGTTGGGCAGCGGCAGGCTAGACA...GGAGTAAACACAGAGACTGTACAATTTTAAATCGGATTTGAATCTCTTGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATACACAGCTCTGGAGACTaGCTGTTCACCACTCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLISYLHHPCMETKVIYIHSSGD*LFTTPF Trigger: AAAGGGAGTGGTGAACAGCCAGTCTCCAGAGCTGTG...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TCTCACAAGAGATTCAAATCCGATTTAAAATTGTACAGTCTCTGTGTTTACTCCTTACTGTCTCTTGGGTaGAGCTGGCCAGTTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHKRFKSDLKLYSLCVYSLLSLG*SWPVHG Trigger: CCCATGAACTGGCCAGCTCCACCCAAGAGACAGTAA...GGAGTAAACACAGAGACTGTACAATTTTAAATCGGATTTGAATCTCTTGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| 3UTR CAA 72 bp | TGTACAGTCTCTGTGTTTACTCCGTCGAGTTCTTCTTaGGCTACATACAGAAAACATCTTCTTTCTTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CTVSVFTPSSSS*ATYRKHLLSSL Trigger: GAGGGAAGAAAGAAGATGTTTTCTGTATGTAGCCAAAGAAGAACTCGACGGAGTAAACACAGAGACTGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CCA 90 bp | TCTCACAAGAGATTCAAATCCGATTTAAAATTGTACAGTCTCTGTGTTTACTCCCAGGAAGTGGCTCTTTaGTCTCATCTCCCTCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SHKRFKSDLKLYSLCVYSQEVAL*SHLPHP Trigger: AGGATGAGGGAGATGAGACCAAAGAGCCACTTCCTG...GGAGTAAACACAGAGACTGTACAATTTTAAATCGGATTTGAATCTCTTGTGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| 3UTR CAA 72 bp | ATGCCATCTCACAAGAGATTCAAATCCGATTTAAAATaGTACAGTCTCTGTGTTTACTCCGTCGAGTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MPSHKRFKSDLK*YSLCVYSVEFF Trigger: GAAGAACTCGACGGAGTAAACACAGAGACTGTACAATTTTAAATCGGATTTGAATCTCTTGTGAGATGGCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | GCACAGTCCCGGACCACTCTCTTCAGCTCTGCAGCAGACACCAGGTaGGCACCCCTGCTCCTGCAGGAGAGCCTCGCTGCCTCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQSRTTLFSSAADTR*APLLLQESLAASRS Trigger: GGACCTGGAGGCAGCGAGGCTCTCCTGCAGGAGCAGGGGTGCCCACCTGGTGTCTGCTGCAGAGCTGAAGAGAGTGGTCCGGGACTGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | GGTCGTCCCGAGGGTGCCATCCGCCAGCCAGCCTGTTGTGCACACTaGGGAGGCACAGTCCCGGACCACTCTCTTCAGCTCTGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GRPEGAIRQPACCAH*GGTVPDHSLQLCSR Trigger: TCTGCTGCAGAGCTGAAGAGAGTGGTCCGGGACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGGCGGATGGCACCCTCGGGACGACC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | TACACACGGTCGTCCCGAGGGTGCCATCCGCCAGCCAGCCTGTTGTaGACACTGCGGAGGCACAGTCCCGGACCACTCTCTTCAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YTRSSRGCHPPASLL*TLRRHSPGPLSSAL Trigger: CAGAGCTGAAGAGAGTGGTCCGGGACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGGCGGATGGCACCCTCGGGACGACCGTGTGTA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CTGGCTGTTCACCACTCCCTTTGCTACACACGGTCGTCCCGAGGGTaGCATCCGCCAGCCAGCCTGTTGTGCACACTGCGGAGGCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LAVHHSLCYTRSSRG*HPPASLLCTLRRHS Trigger: ACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGGCGGATGGCACCCTCGGGACGACCGTGTGTAGCAAAGGGAGTGGTGAACAGCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CAACAAGGTAAAGGCCGTTTCCCGATGGCCTGGGACGGACCCTGGTaGACACAGGTACAGCAGCTCATCCCCCATCTCCAAGCCAGTGCG | + |
|
Preference number: 5 (lower is better) Translates to: QQGKGRFPMAWDGPW*TQVQQLIPHLQASA Trigger: CGCACTGGCTTGGAGATGGGGGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTTACCTTGTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CACCGGGCCTTTCCTGAAGCTGGGACACTCATCCCCTACACACGGTaGCGAGGTTGGAAGAAACTTCTCACTTGCACCAGGCCCAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRAFPEAGTLIPYTR*RGWKKLLTCTRPRA Trigger: GGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAGTGTCCCAGCTTCAGGAAAGGCCCGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | CACAGGTACAGCAGCTCATCCCCCATCTCCAAGCCAGTGCGACCCTaGAGGATGGTGTGTGGGAATGACGGTGGGTCTCCACACGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRYSSSSPISKPVRP*RMVCGNDGGSPHGL Trigger: GAGACCGTGTGGAGACCCACCGTCATTCCCACACACCATCCTCCAGGGTCGCACTGGCTTGGAGATGGGGGATGAGCTGCTGTACCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | GCACAACAAGGTAAAGGCCGTTTCCCGATGGCCTGGGACGGACCCTaGTGCACACAGGTACAGCAGCTCATCCCCCATCTCCAAGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: AQQGKGRFPMAWDGP*CTQVQQLIPHLQAS Trigger: ACTGGCTTGGAGATGGGGGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTTACCTTGTTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | CCCACAGCTGTTGCACAACAAGGTAAAGGCCGTTTCCCGATGGCCTaGGACGGACCCTGGTGCACACAGGTACAGCAGCTCATCCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PTAVAQQGKGRFPMA*DGPWCTQVQQLIPH Trigger: ATGGGGGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTTACCTTGTTGTGCAACAGCTGTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | CACTCCCCACAGCTGTTGCACAACAAGGTAAAGGCCGTTTCCCGATaGCCTGGGACGGACCCTGGTGCACACAGGTACAGCAGCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: HSPQLLHNKVKAVSR*PGTDPGAHRYSSSS Trigger: GGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTTACCTTGTTGTGCAACAGCTGTGGGGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | AGTTATCCTGAACCTCAGGGGCTGTCACCCCTGCTGGAGGCTGGGTaGCCTCCACATCAGTCGAGGGCGTACGTTTATGTGTCGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SYPEPQGLSPLLEAG*PPHQSRAYVYVSAG Trigger: TCCAGCCGACACATAAACGTACGCCCTCGACTGATGTGGAGGCCACCCAGCCTCCAGCAGGGGTGACAGCCCCTGAGGTTCAGGATAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | TGGAGGGTTGTTGTTACTGTCTCTTGGGTGGAGCTGGCCAGTTCATaGGGTGAGGTGACCTTGGGTGACGGCTGTGTGGTGACTCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: WRVVVTVSWVELASS*GEVTLGDGCVVTLR Trigger: CCGGAGAGTCACCACACAGCCGTCACCCAAGGTCACCTCACCCCATGAACTGGCCAGCTCCACCCAAGAGACAGTAACAACAACCCTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | TTTCCTGAAGCTGGGACACTCATCCCCTACACACGGTGCCGAGGTTaGAAGAAACTTCTCACTTGCACCAGGCCCAGGGCCCTCCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FPEAGTLIPYTRCRG*KKLLTCTRPRALLS Trigger: GGACAGGAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAGTGTCCCAGCTTCAGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CTAACCAGGAATCGTCGCTGCTGCTCACCCCTGGGTCCTCTGCCTTaGTGTCATTCCTATCCACAAATGGCTCTGAGGGGCTGTAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LTRNRRCCSPLGPLP*CHSYPQMALRGCRW Trigger: CCACCTACAGCCCCTCAGAGCCATTTGTGGATAGGAATGACAGCAAGGCAGAGGACCCAGGGGTGAGCAGCAGCGACGATTCCTGGTTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CAACAGATAAGGGAAGTTATCCTGAACCTCAGGGGCTGTCACCCCTaGTGGAGGCTGGGTGGCCTCCACATCAGTCGAGGGCGTACGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QQIREVILNLRGCHP*WRLGGLHISRGRTF Trigger: AAACGTACGCCCTCGACTGATGTGGAGGCCACCCAGCCTCCAGCAGGGGTGACAGCCCCTGAGGTTCAGGATAACTTCCCTTATCTGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | CTCATCCCCTACACACGGTGCCGAGGTTGGAAGAAACTTCTCACTTaGACCAGGCCCAGGGCCCTCCTGTCCCAAGAAGTCCTCAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: LIPYTRCRGWKKLLT*TRPRALLSQEVLRQ Trigger: TTGTCTGAGGACTTCTTGGGACAGGAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | AGGAACTGGGTGGCTGTCAATTCTCACGTCCACAGCTCTGGAGACTaGCTGTTCACCACTCCCTTTGCTACACACGGTCGTCCCGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RNWVAVNSHVHSSGD*LFTTPFATHGRPEG Trigger: ACCCTCGGGACGACCGTGTGTAGCAAAGGGAGTGGTGAACAGCCAGTCTCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATGGTCTTTCCCAGCTCTGGCTaGTGGAAAGTCTCGGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: SRRVLSGPLGPSCNPVMVFPSSG*WKVSAG Trigger: TCCGGCCGAGACTTTCCACAAGCCAGAGCTGGGAAA...GACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | GAGACGCCACTCAGTGGTCACTGTTATAAGCAATGGCTGGGATGGATCAGCCCATGGGGTGAGGTGACCTaGGGTGACGGCTGTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ETPLSGHCYKQWLGWISPWGEVT*GDGCVV Trigger: CACCACACAGCCGTCACCCAAGGTCACCTCACCCCA...TGGGCTGATCCATCCCAGCCATTGCTTATAACAGTGACCACTGAGTGGCGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS TCA 90 bp | CCCCATCTCCAAGCCAGTGCGACCCTGGAGGATGGTGTGTGGGAATaGCGGTGGGTCTCCACACGGTCTCTCTTCGTCCTTAATACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: PHLQASATLEDGVWE*RWVSTRSLFVLNTK Trigger: CTTTGTATTAAGGACGAAGAGAGACCGTGTGGAGACCCACCGTCATTCCCACACACCATCCTCCAGGGTCGCACTGGCTTGGAGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 90 bp | AAGCCCCATCTGTCACAGGGTAGCCATCTAACCAGGAATCGTCGCTaGTGCTCACCCCTGGGTCCTCTGCCTTGCTGTCATTCCTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KPHLSQGSHLTRNRR*CSPLGPLPCCHSYP Trigger: TGGATAGGAATGACAGCAAGGCAGAGGACCCAGGGGTGAGCAGCAGCGACGATTCCTGGTTAGATGGCTACCCTGTGACAGATGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | GGCTCTTTGGTCTCATCTCCCTCATCCTTTCCCAGCTCTGGCTTGTaGAAAGTCTCGGCCGGAAACCAGAGGGAGTACTTCCGGTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSLVSSPSSFPSSGL*KVSAGNQREYFRCR Trigger: CCTACACCGGAAGTACTCCCTCTGGTTTCCGGCCGAGACTTTCCACAAGCCAGAGCTGGGAAAGGATGAGGGAGATGAGACCAAAGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | GGCGTACGTTTATGTGTCGGCTGGAGGGTTGTTGTTACTGTCTCTTaGGTGGAGCTGGCCAGTTCATGGGGTGAGGTGACCTTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: GVRLCVGWRVVVTVS*VELASSWGEVTLGD Trigger: GTCACCCAAGGTCACCTCACCCCATGAACTGGCCAGCTCCACCCAAGAGACAGTAACAACAACCCTCCAGCCGACACATAAACGTACGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | AGCAGACGTGTCCTCTCTGGTCCCCTTGGGCCTTCGTGTAACCCAGTTATGGTCGTGTCGGCTGGAGGGTaGTTGTTACTGTCTCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRRVLSGPLGPSCNPVMVVSAGG*LLLSLG Trigger: CCCAAGAGACAGTAACAACAACCCTCCAGCCGACAC...GACCATAACTGGGTTACACGAAGGCCCAAGGGGACCAGAGAGGACACGTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | CCTTGCTGTCATTCCTATCCACAAATGGCTCTGAGGGGCTGTAGGTaGTGGCATAGACCAGCCTTGTTTCAGACTCCTCTGGGGCCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PCCHSYPQMALRGCR*WHRPALFQTPLGPV Trigger: AACCGGCCCCAGAGGAGTCTGAAACAAGGCTGGTCTATGCCACCACCTACAGCCCCTCAGAGCCATTTGTGGATAGGAATGACAGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | AACACCCTGGAGTCAGCCAGAGGTGACACTTTACATGATGCTGTGGGATGCCGAACTGACCCATCCCCCTaGTCCTCATCATCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NTLESARGDTLHDAVGCRTDPSP*SSSSSC Trigger: GCAGGAGGATGATGAGGACAAGGGGGATGGGTCAGT...TCGGCATCCCACAGCATCATGTAAAGTGTCACCTCTGGCTGACTCCAGGGTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | GAGGAGAAACCAAGAACTGGGTTTCACTGCCAGCCCTGGAGTGTGGAGTTTGTGGAAGAAACTTCTCACTaGCACCAGGCCCAGGGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: EEKPRTGFHCQPWSVEFVEETSH*HQAQGP Trigger: AGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTC...CACAAACTCCACACTCCAGGGCTGGCAGTGAAACCCAGTTCTTGGTTTCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | TGCTGTCATTCCTATCCACAAATGGCTCTGAGGGGCTGTAGGTGGTaGCATAGACCAGCCTTGTTTCAGACTCCTCTGGGGCCGGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCHSYPQMALRGCRW*HRPALFQTPLGPVS Trigger: AGAAACCGGCCCCAGAGGAGTCTGAAACAAGGCTGGTCTATGCCACCACCTACAGCCCCTCAGAGCCATTTGTGGATAGGAATGACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS TCA 90 bp | ACCAGCCTTGTTTCAGACTCCTCTGGGGCCGGTTTCTCTTCACTGTaGTTGTCTCTGGCAGGAAGTGGCTCTTTGGTCTCATCTCCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: TSLVSDSSGAGFSSL*LSLAGSGSLVSSPS Trigger: TGAGGGAGATGAGACCAAAGAGCCACTTCCTGCCAGAGACAATCACAGTGAAGAGAAACCGGCCCCAGAGGAGTCTGAAACAAGGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 90 bp | TTTCAGACTCCTCTGGGGCCGGTTTCTCTTCACTGTGATTGTCTCTaGCAGGAAGTGGCTCTTTGGTCTCATCTCCCTCATCCTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FQTPLGPVSLHCDCL*QEVALWSHLPHPFP Trigger: TGGGAAAGGATGAGGGAGATGAGACCAAAGAGCCACTTCCTGCCAGAGACAATCACAGTGAAGAGAAACCGGCCCCAGAGGAGTCTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | GGCTGGGATGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCCACTCCCCACAGCTGTaGCACAACAAGGTAAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GWDGSAQGHHIHVYSLSTHSPQL*HNKVKA Trigger: GGCCTTTACCTTGTTGTGCAACAGCTGTGGGGAGTG...GGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCATCCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 90 bp | CTCTTCGTCCTTAATACAAAGAGCATTGTACTTAGCACCAGGAACTaGGTGGCTGTCAATTCTCACGTCCACAGCTCTGGAGACTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LFVLNTKSIVLSTRN*VAVNSHVHSSGDWL Trigger: CAGCCAGTCTCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTCCTGGTGCTAAGTACAATGCTCTTTGTATTAAGGACGAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 90 bp | ATCCCTGGTATGGGAACTCTCAGTCTCAGACACATTGATGGGTCCTaGAACCAGAGCTTCTACGTCGAGCATTTGAGATGGACTGATCGA | + |
|
Preference number: 5 (lower is better) Translates to: IPGMGTLSLRHIDGS*NQSFYVEHLRWTDR Trigger: TCGATCAGTCCATCTCAAATGCTCGACGTAGAAGCTCTGGTTCCAGGACCCATCAATGTGTCTGAGACTGAGAGTTCCCATACCAGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS-3UTR CAA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGAATCTTTCCCGCAGGCTaGCACCAGTCCGTACCACTC | + |
|
Preference number: 5 (lower is better) Translates to: WISPGTSYSCLFALYQVGIFPAG*HQSVPL Trigger: GAGTGGTACGGACTGGTGCAAGCCTGCGGGAAAGAT...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS TCA 90 bp | TCGAATCAACATCCCTGGTATGGGAACTCTCAGTCTCAGACACATTaGTGGGTCCTGGAACCAGAGCTTCTACGTCGAGCATTTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: SNQHPWYGNSQSQTH*WVLEPELLRRAFEM Trigger: CATCTCAAATGCTCGACGTAGAAGCTCTGGTTCCAGGACCCATCAATGTGTCTGAGACTGAGAGTTCCCATACCAGGGATGTTGATTCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 90 bp | TCGTCCTTAATACAAAGAGCATTGTACTTAGCACCAGGAACTGGGTaGCTGTCAATTCTCACGTCCACAGCTCTGGAGACTGGCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSLIQRALYLAPGTG*LSILTSTALETGCS Trigger: TGAACAGCCAGTCTCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTCCTGGTGCTAAGTACAATGCTCTTTGTATTAAGGACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGATGTTGTTACTGTCTCTaGGGTGGAGCTGGCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WISPGTSYSCLFALYQVGCCYCL*GGAGQF Trigger: GAACTGGCCAGCTCCACCCAAGAGACAGTAACAACA...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | TGGATCAGCCCAGGGACATCATATTCATGTTTATTCGCTCTCTACCAAGTAGGACACACGGTGCCGAGGTaGGAAGAAACTTCTCACTTG | + |
|
Preference number: 5 (lower is better) Translates to: WISPGTSYSCLFALYQVGHTVPR*EETSHL Trigger: CAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTG...TCCTACTTGGTAGAGAGCGAATAAACATGAATATGATGTCCCTGGGCTGATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | TTCTATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGTGCCCAACGTTCAGCTaGTATACAGAGCTCTTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FYWNGVKAEIWDSGNEFQCPTFS*YTELLC Trigger: GCACAAGAGCTCTGTATACAAGCTGAACGTTGGGCA...CTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS TCA 90 bp | TTCCTTTTCTCCCTCTGCCCGGGAGTCTTCCATGAGTTCCCTGAATaGCACGGATCTGTCATCAGGGAAATTTTCTTCATAGTCAATGTG | + |
|
Preference number: 5 (lower is better) Translates to: FLFSLCPGVFHEFPE*HGSVIREIFFIVNV Trigger: CACATTGACTATGAAGAAAATTTCCCTGATGACAGATCCGTGTCATTCAGGGAACTCATGGAAGACTCCCGGGCAGAGGGAGAAAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCGCAGGAAGTGGCTCTTaGGTCTCATCTCCCTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSAGSGS*VSSPSS Trigger: GGATGAGGGAGATGAGACCAAAGAGCCACTTCCTGC...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | CTTCGTGTAACCCAGTTATGGTCCATGGGATTTTGTATTGTATTATACTGTTCCTCGGCTGGAGGGTTGTaGTTACTGTCTCTTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LRVTQLWSMGFCIVLYCSSAGGL*LLSLGW Trigger: CCACCCAAGAGACAGTAACAACAACCCTCCAGCCGA...GGAACAGTATAATACAATACAAAATCCCATGGACCATAACTGGGTTACACGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | TTCTATTGGAATGGGGTCAAAGCAGAGATCTGGGATTCGGGCAATGAATTCCAGTTAATACAAAGAGCATaGTACTTAGCACCAGGAACT | + |
|
Preference number: 5 (lower is better) Translates to: FYWNGVKAEIWDSGNEFQLIQRA*YLAPGT Trigger: AGTTCCTGGTGCTAAGTACAATGCTCTTTGTATTAA...CTGGAATTCATTGCCCGAATCCCAGATCTCTGCTTTGACCCCATTCCAATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS-3UTR CAA 90 bp | GGTTTAATTAGTTACTTACACCATCCCTGCATGGAGACAAAGGTTATTTACATATCAGTCTCAGACACATaGATGGGTCCTGGAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: GLISYLHHPCMETKVIYISVSDT*MGPGTR Trigger: TCTGGTTCCAGGACCCATCAATGTGTCTGAGACTGA...TATGTAAATAACCTTTGTCTCCATGCAGGGATGGTGTAAGTAACTAATTAAACC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 72 bp | AGTACTTCCGGTGTAGGCGGGATCGTGGCCAGTCAGTaGGCACACTGCCCCCAGCGCCTGGCGAGCCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: STSGVGGIVASQ*AHCPQRLASLW Trigger: CCACAGGCTCGCCAGGCGCTGGGGGCAGTGTGCGCACTGACTGGCCACGATCCCGCCTACACCGGAAGTACT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 72 bp | GAGGGTGCCATCCGCCAGCCAGCCTGTTGTGCACACTaGGGAGGCACAGTCCCGGACCACTCTCTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: EGAIRQPACCAH*GGTVPDHSLQL Trigger: GAGCTGAAGAGAGTGGTCCGGGACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGGCGGATGGCACCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CAA 90 bp | TGCTACACACGGTCGTCCCGAGGGTGCCATCCGCCAGCCAGCCTGTaGTGCACACTGCGGAGGCACAGTCCCGGACCACTCTCTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CYTRSSRGCHPPASL*CTLRRHSPGPLSSA Trigger: AGCTGAAGAGAGTGGTCCGGGACTGTGCCTCCGCAGTGTGCACAACAGGCTGGCTGGCGGATGGCACCCTCGGGACGACCGTGTGTAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 72 bp | TCGTGGCCAGTCAGTGCGCACACTGCCCCCAGCGCCTaGCGAGCCTGTGGTAGGCACAAAGGCTTTTACCTG | + |
|
Preference number: 6 (lower is better) Translates to: SWPVSAHTAPSA*RACGRHKGFYL Trigger: CAGGTAAAAGCCTTTGTGCCTACCACAGGCTCGCCAGGCGCTGGGGGCAGTGTGCGCACTGACTGGCCACGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 72 bp | GGTAAAGGCCGTTTCCCGATGGCCTGGGACGGACCCTaGTGCACACAGGTACAGCAGCTCATCCCCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: GKGRFPMAWDGP*CTQVQQLIPHL Trigger: GAGATGGGGGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTTACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CAA 72 bp | TCCACAGCTCTGGAGACTGGCTGTTCACCACTCCCTTaGCTACACACGGTCGTCCCGAGGGTGCCATCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: STALETGCSPLP*LHTVVPRVPSA Trigger: GGCGGATGGCACCCTCGGGACGACCGTGTGTAGCAAAGGGAGTGGTGAACAGCCAGTCTCCAGAGCTGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS GCA 72 bp | AAAGGCCGTTTCCCGATGGCCTGGGACGGACCCTGGTaGACACAGGTACAGCAGCTCATCCCCCATCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: KGRFPMAWDGPW*TQVQQLIPHLQ Trigger: TTGGAGATGGGGGATGAGCTGCTGTACCTGTGTGCACCAGGGTCCGTCCCAGGCCATCGGGAAACGGCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
||
| CDS CCA 72 bp | AGCAGCTCATCCCCCATCTCCAAGCCAGTGCGACCCTaGAGGATGGTGTGTGGGAATGACGGTGGGTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSPISKPVRP*RMVCGNDGGSP Trigger: TGGAGACCCACCGTCATTCCCACACACCATCCTCCAGGGTCGCACTGGCTTGGAGATGGGGGATGAGCTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | GCTGGGACACTCATCCCCTACACACGGTGCCGAGGTTaGAAGAAACTTCTCACTTGCACCAGGCCCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: AGTLIPYTRCRG*KKLLTCTRPRA Trigger: GGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAGTGTCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 90 bp | TCTTTCCCGCAGGCTTGCACCAGTCCGTACCACTCCCCACAGCTGTaGCACAACAAGGTAAAGGCCGTTTCCCGATGGCCTGGGACGGAC | + |
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Preference number: 6 (lower is better) Translates to: SFPQACTSPYHSPQL*HNKVKAVSRWPGTD Trigger: GTCCGTCCCAGGCCATCGGGAAACGGCCTTTACCTTGTTGTGCAACAGCTGTGGGGAGTGGTACGGACTGGTGCAAGCCTGCGGGAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS TCA 72 bp | CAAGCCAGTGCGACCCTGGAGGATGGTGTGTGGGAATaGCGGTGGGTCTCCACACGGTCTCTCTTCGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: QASATLEDGVWE*RWVSTRSLFVL Trigger: AAGGACGAAGAGAGACCGTGTGGAGACCCACCGTCATTCCCACACACCATCCTCCAGGGTCGCACTGGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS GCA 72 bp | ACAGGTACAGCAGCTCATCCCCCATCTCCAAGCCAGTaGGACCCTGGAGGATGGTGTGTGGGAATGACGGTG | + |
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Preference number: 6 (lower is better) Translates to: TGTAAHPPSPSQ*DPGGWCVGMTV Trigger: CACCGTCATTCCCACACACCATCCTCCAGGGTCGCACTGGCTTGGAGATGGGGGATGAGCTGCTGTACCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 72 bp | AGCTGGGACACTCATCCCCTACACACGGTGCCGAGGTaGGAAGAAACTTCTCACTTGCACCAGGCCCAGGGC | + |
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Preference number: 6 (lower is better) Translates to: SWDTHPLHTVPR*EETSHLHQAQG Trigger: GCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAGTGTCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 90 bp | ACTCATCCCCTACACACGGTGCCGAGGTTGGAAGAAACTTCTCACTaGCACCAGGCCCAGGGCCCTCCTGTCCCAAGAAGTCCTCAGACA | + |
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Preference number: 6 (lower is better) Translates to: THPLHTVPRLEETSH*HQAQGPPVPRSPQT Trigger: TGTCTGAGGACTTCTTGGGACAGGAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAGGGGATGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS GCA 72 bp | AATCGTCGCTGCTGCTCACCCCTGGGTCCTCTGCCTTaGTGTCATTCCTATCCACAAATGGCTCTGAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: NRRCCSPLGPLP*CHSYPQMALRG Trigger: GCCCCTCAGAGCCATTTGTGGATAGGAATGACAGCAAGGCAGAGGACCCAGGGGTGAGCAGCAGCGACGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS GCA 72 bp | CTGTCACAGGGTAGCCATCTAACCAGGAATCGTCGCTaGTGCTCACCCCTGGGTCCTCTGCCTTGCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSQGSHLTRNRR*CSPLGPLPCCH Trigger: ATGACAGCAAGGCAGAGGACCCAGGGGTGAGCAGCAGCGACGATTCCTGGTTAGATGGCTACCCTGTGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS GCA 72 bp | TACACACGGTGCCGAGGTTGGAAGAAACTTCTCACTTaGACCAGGCCCAGGGCCCTCCTGTCCCAAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: YTRCRGWKKLLT*TRPRALLSQEV Trigger: GACTTCTTGGGACAGGAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 72 bp | CAGGCTTGCACCAGTCCGTACCACTCCCCACAGCTGTaGCACAACAAGGTAAAGGCCGTTTCCCGATGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QACTSPYHSPQL*HNKVKAVSRWP Trigger: AGGCCATCGGGAAACGGCCTTTACCTTGTTGTGCAACAGCTGTGGGGAGTGGTACGGACTGGTGCAAGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 72 bp | GCTCTGAGGGGCTGTAGGTGGTGGCATAGACCAGCCTaGTTTCAGACTCCTCTGGGGCCGGTTTCTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: ALRGCRWWHRPA*FQTPLGPVSLH Trigger: GTGAAGAGAAACCGGCCCCAGAGGAGTCTGAAACAAGGCTGGTCTATGCCACCACCTACAGCCCCTCAGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 72 bp | CTACACACGGTGCCGAGGTTGGAAGAAACTTCTCACTaGCACCAGGCCCAGGGCCCTCCTGTCCCAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LHTVPRLEETSH*HQAQGPPVPRS Trigger: ACTTCTTGGGACAGGAGGGCCCTGGGCCTGGTGCAAGTGAGAAGTTTCTTCCAACCTCGGCACCGTGTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 90 bp | AGTGGCTCTTTGGTCTCATCTCCCTCATCCTTTCCCAGCTCTGGCTaGTGGAAAGTCTCGGCCGGAAACCAGAGGGAGTACTTCCGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SGSLVSSPSSFPSSG*WKVSAGNQREYFRC Trigger: ACACCGGAAGTACTCCCTCTGGTTTCCGGCCGAGACTTTCCACAAGCCAGAGCTGGGAAAGGATGAGGGAGATGAGACCAAAGAGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | TCCTATCCACAAATGGCTCTGAGGGGCTGTAGGTGGTaGCATAGACCAGCCTTGTTTCAGACTCCTCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SYPQMALRGCRW*HRPALFQTPLG Trigger: CCCCAGAGGAGTCTGAAACAAGGCTGGTCTATGCCACCACCTACAGCCCCTCAGAGCCATTTGTGGATAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | TTATGTGTCGGCTGGAGGGTTGTTGTTACTGTCTCTTaGGTGGAGCTGGCCAGTTCATGGGGTGAGGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LCVGWRVVVTVS*VELASSWGEVT Trigger: GGTCACCTCACCCCATGAACTGGCCAGCTCCACCCAAGAGACAGTAACAACAACCCTCCAGCCGACACATAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 72 bp | CAGTCGAGGGCGTACGTTTATGTGTCGGCTGGAGGGTaGTTGTTACTGTCTCTTGGGTGGAGCTGGCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: QSRAYVYVSAGG*LLLSLGWSWPV Trigger: AACTGGCCAGCTCCACCCAAGAGACAGTAACAACAACCCTCCAGCCGACACATAAACGTACGCCCTCGACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CAA 90 bp | CCACAAATGGCTCTGAGGGGCTGTAGGTGGTGGCATAGACCAGCCTaGTTTCAGACTCCTCTGGGGCCGGTTTCTCTTCACTGTGATTGT | + |
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Preference number: 6 (lower is better) Translates to: PQMALRGCRWWHRPA*FQTPLGPVSLHCDC Trigger: ACAATCACAGTGAAGAGAAACCGGCCCCAGAGGAGTCTGAAACAAGGCTGGTCTATGCCACCACCTACAGCCCCTCAGAGCCATTTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | GAACTGGGTGGCTGTCAATTCTCACGTCCACAGCTCTaGAGACTGGCTGTTCACCACTCCCTTTGCTACACA | + |
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Preference number: 6 (lower is better) Translates to: ELGGCQFSRPQL*RLAVHHSLCYT Trigger: TGTGTAGCAAAGGGAGTGGTGAACAGCCAGTCTCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | CCTCTGGGGCCGGTTTCTCTTCACTGTGATTGTCTCTaGCAGGAAGTGGCTCTTTGGTCTCATCTCCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PLGPVSLHCDCL*QEVALWSHLPH Trigger: ATGAGGGAGATGAGACCAAAGAGCCACTTCCTGCCAGAGACAATCACAGTGAAGAGAAACCGGCCCCAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS TCA 72 bp | GTTTCAGACTCCTCTGGGGCCGGTTTCTCTTCACTGTaGTTGTCTCTGGCAGGAAGTGGCTCTTTGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VSDSSGAGFSSL*LSLAGSGSLVS Trigger: TGAGACCAAAGAGCCACTTCCTGCCAGAGACAATCACAGTGAAGAGAAACCGGCCCCAGAGGAGTCTGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | CCTGGCGAGCCTGTGGTAGGCACAAAGGCTTTTACCTaGGCTATGTTTTCTTTAGAGACAGAAGTGAAGACC | + |
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Preference number: 6 (lower is better) Translates to: PGEPVVGTKAFT*AMFSLETEVKT Trigger: GGTCTTCACTTCTGTCTCTAAAGAAAACATAGCCCAGGTAAAAGCCTTTGTGCCTACCACAGGCTCGCCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | ATGGGAACTCTCAGTCTCAGACACATTGATGGGTCCTaGAACCAGAGCTTCTACGTCGAGCATTTGAGATGG | + |
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Preference number: 6 (lower is better) Translates to: MGTLSLRHIDGS*NQSFYVEHLRW Trigger: CCATCTCAAATGCTCGACGTAGAAGCTCTGGTTCCAGGACCCATCAATGTGTCTGAGACTGAGAGTTCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | ATACAAAGAGCATTGTACTTAGCACCAGGAACTGGGTaGCTGTCAATTCTCACGTCCACAGCTCTGGAGACT | + |
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Preference number: 6 (lower is better) Translates to: IQRALYLAPGTG*LSILTSTALET Trigger: AGTCTCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTCCTGGTGCTAAGTACAATGCTCTTTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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| CDS CCA 72 bp | CTTAATACAAAGAGCATTGTACTTAGCACCAGGAACTaGGTGGCTGTCAATTCTCACGTCCACAGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LNTKSIVLSTRN*VAVNSHVHSSG Trigger: TCCAGAGCTGTGGACGTGAGAATTGACAGCCACCCAGTTCCTGGTGCTAAGTACAATGCTCTTTGTATTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135338.3 |
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