Pregenerated sensors for SUSD4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038576Ensembl transcript IDs: ENSMUST00000085724.5, ENSMUST00000153348.8, ENSMUST00000155229.7, ENSMUST00000193660.6, ENSMUST00000194981.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGTGTGGCACAGTCTCACGCTCTGTAGCAAGAGACACCCAGCTCTaGCACAGGGGTGAGGCAGAGAGAGTCCCCTCTGCACTTGGTTCC | + |
|
Preference number: 1 (lower is better) Translates to: VCGTVSRSVARDTQL*HRGEAERVPSALGS Trigger: GGAACCAAGTGCAGAGGGGACTCTCTCTGCCTCACCCCTGTGTCAGAGCTGGGTGTCTCTTGCTACAGAGCGTGAGACTGTGCCACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 90 bp | TCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTaGCACAGTCTCACGCTCTGTAGCAAGAGACACCCAGCTCTGACA | + |
|
Preference number: 1 (lower is better) Translates to: SEEQGVLLAGATGCV*HSLTLCSKRHPALT Trigger: TGTCAGAGCTGGGTGTCTCTTGCTACAGAGCGTGAGACTGTGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 90 bp | TGCACTTGGTTCCCTGCTGGTCATGATAAACCCTTGAGTCTCATTTaGAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: CTWFPAGHDKPLSLI*KHRLCCWPDPQSCW Trigger: CCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAAATGAGACTCAAGGGTTTATCATGACCAGCAGGGAACCAAGTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 90 bp | AGAGTCCCCTCTGCACTTGGTTCCCTGCTGGTCATGATAAACCCTTaGGTCTCATTTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCAC | + |
|
Preference number: 1 (lower is better) Translates to: RVPSALGSLLVMINP*VSFESTAFAVGQTH Trigger: GTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAAATGAGACTCAAGGGTTTATCATGACCAGCAGGGAACCAAGTGCAGAGGGGACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 90 bp | TTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGATTaGCTGTCCAGGTGTAAGAGATGGTCTGAGTGTCACATGAGAGTC | + |
|
Preference number: 1 (lower is better) Translates to: FILSFLVQAATSCFD*LSRCKRWSECHMRV Trigger: GACTCTCATGTGACACTCAGACCATCTCTTACACCTGGACAGCCAATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 90 bp | CAGAGCATAGGGGCTTGGCATGAAGAAATTTTCAGAAAGCGGAGTTaGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: QSIGAWHEEIFRKRS*LVYPFLSRSSRHIL Trigger: CAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAACTCCGCTTTCTGAAAATTTCTTCATGCCAAGCCCCTATGCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 90 bp | CAGGATTCGATCAAGCCTCCGTCCCTCGGTGCTCTAGCAGCACAGTaGTTCTATTGGATGAGAGTTTTGTTCATATTTGTCTACAACCCA | + |
|
Preference number: 1 (lower is better) Translates to: QDSIKPPSLGALAAQ*FYWMRVLFIFVYNP Trigger: TGGGTTGTAGACAAATATGAACAAAACTCTCATCCAATAGAATCACTGTGCTGCTAGAGCACCGAGGGACGGAGGCTTGATCGAATCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 90 bp | GTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGACACCATaGACCAACATGTATTTGAAGAGACACTTCTGGACTCGAGGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: VHICLQPRGGMETTP*TNMYLKRHFWTRGS Trigger: AGAGCCTCGAGTCCAGAAGTGTCTCTTCAAATACATGTTGGTCCATGGTGTCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCCACCGCCTTTGCTGTTaGCCAGACCCACAGTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGHRLCC*PDPQSC Trigger: GCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTG...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCAAGAGACACCCAGCTCTaGCACAGGGGTGAGGCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AFRGAGSAVSRSNRMCVARDTQL*HRGEAE Trigger: CTCTGCCTCACCCCTGTGTCAGAGCTGGGTGTCTCT...TGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CCA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCAGTCCCCTCTGCACTTaGTTCCCTGCTGGTCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGSPLCT*FPAGHD Trigger: ATCATGACCAGCAGGGAACCAAGTGCAGAGGGGACT...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR TCA 90 bp | GCTTTCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCACCCTTGAGTCTCATTTaGAAGCACCGCCTTTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: AFRGAGSAVSRSNRMCVAPLSLI*KHRLCC Trigger: ACAGCAAAGGCGGTGCTTTCAAATGAGACTCAAGGG...TGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGAGCTCTGACACAGGGGTaGGGCAGAGAGAGTCCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRALTQG*GRESPL Trigger: GAGGGGACTCTCTCTGCCTCACCCCTGTGTCAGAGC...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGAGGAGGGATGGAAACGACACCATGGACCAACATGTATTTGAAGAGACAACAACACCCAGTGGGTaGCATGAGACCCTCATGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQRRDGNDTMDQHVFEETTTPSG*HETLME Trigger: TTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGT...TGTCTCTTCAAATACATGTTGGTCCATGGTGTCGTTTCCATCCCTCCTCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGAGGAGGGATGGAAACGACACCATGGACCAACATGTATTTGAAGAGACAAGAGAGCTGAGGGGCTaGGAGTGGTCTCAAAAGATC | + |
|
Preference number: 2 (lower is better) Translates to: TQRRDGNDTMDQHVFEETRELRG*EWSQKI Trigger: GATCTTTTGAGACCACTCCCAGCCCCTCAGCTCTCT...TGTCTCTTCAAATACATGTTGGTCCATGGTGTCGTTTCCATCCCTCCTCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CAA 90 bp | GATCAAGCCTCCGTCCCTCGGTGCTCTAGCAGCACAGTGATTCTATaGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: DQASVPRCSSSTVIL*DESFVHICLQPRGG Trigger: CCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCAATAGAATCACTGTGCTGCTAGAGCACCGAGGGACGGAGGCTTGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR GCA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGAGAGAGAGTCCCCTCTaGACTTGGTTCCCTGCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: INLSGVCQMPKPNMTRLRRESPL*TWFPAG Trigger: ACCAGCAGGGAACCAAGTGCAGAGGGGACTCTCTCT...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CCA 90 bp | TTGGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGATTGCAACAGGATGTGTGTaGCACAGTCTCACGCTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LACLSFPFSFKPPHPALIATGCV*HSLTLC Trigger: ACAGAGCGTGAGACTGTGCCACACACATCCTGTTGC...AATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGGAGAGGATCTGCTCTTaGGTTTGCAGGTCAACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: INLSGVCQMPKPNMTRLRERICS*VCRSTW Trigger: CCACGTTGACCTGCAAACCCAAGAGCAGATCCTCTC...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR TCA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGACCACATAGGAAGGCATaGGCAGATAAATTTGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRPHRKA*ADKFEW Trigger: CCACTCAAATTTATCTGCTCATGCCTTCCTATGTGG...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCGATCTGCTCTTGGGTTaGCAGGTCAACGTGGGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGDLLLG*QVNVGF Trigger: AAAGCCCACGTTGACCTGCAAACCCAAGAGCAGATC...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | CTCTGTAGCAAGAGACACCCAGCTCTGACACAGGGGTaGGGCAGAGAGAGTCCCCTCTGCACTTGGTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LCSKRHPALTQG*GRESPLCTWFP Trigger: AGGGAACCAAGTGCAGAGGGGACTCTCTCTGCCTCACCCCTGTGTCAGAGCTGGGTGTCTCTTGCTACAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | ACAGTCTCACGCTCTGTAGCAAGAGACACCCAGCTCTaGCACAGGGGTGAGGCAGAGAGAGTCCCCTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TVSRSVARDTQL*HRGEAERVPSA Trigger: TGCAGAGGGGACTCTCTCTGCCTCACCCCTGTGTCAGAGCTGGGTGTCTCTTGCTACAGAGCGTGAGACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 72 bp | CAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTaGCACAGTCTCACGCTCTGTAGCAAGAGACACCCA | + |
|
Preference number: 3 (lower is better) Translates to: QGVLLAGATGCV*HSLTLCSKRHP Trigger: TGGGTGTCTCTTGCTACAGAGCGTGAGACTGTGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | AAACAATTGCTTAGGCACAACACCCAGTGGGTGCCATaGGACCCTCATGGAAATACGGGATGGCAGGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KQLLRHNTQWVP*DPHGNTGWQAG Trigger: GCCTGCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGCCTAAGCAATTGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | GGCTGTCCAGGTGTAAGAGATGGTCTGAGTGTCACATaGGAGTCTTTCCTTGGGAGCCCGTCCCTTACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: GCPGVRDGLSVT*ESFLGSPSLTK Trigger: CTTAGTAAGGGACGGGCTCCCAAGGAAAGACTCTCATGTGACACTCAGACCATCTCTTACACCTGGACAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | TTCCCTGCTGGTCATGATAAACCCTTGAGTCTCATTTaGAAGCACCGCCTTTGCTGTTGGCCAGACCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: FPAGHDKPLSLI*KHRLCCWPDPQ Trigger: CTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAAATGAGACTCAAGGGTTTATCATGACCAGCAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR GCA 72 bp | AAATCAAACAATTGCTTAGGCACAACACCCAGTGGGTaGCATGAGACCCTCATGGAAATACGGGATGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KSNNCLGTTPSG*HETLMEIRDGR Trigger: CCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGCCTAAGCAATTGTTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR GCA 72 bp | CAAAAGATCCGGCTCCCGCTTCCTTCTCCCTCCAAATaGAGACCGTGTTTACAGAAACTTTCCACTTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QKIRLPLPSPSK*RPCLQKLSTLE Trigger: TTCCAAAGTGGAAAGTTTCTGTAAACACGGTCTGCATTTGGAGGGAGAAGGAAGCGGGAGCCGGATCTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR-3UTR CAA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGAGAGAGGATCTGCTCTaGGGTTTGCAGGTCAACGTG | + |
|
Preference number: 3 (lower is better) Translates to: INLSGVCQMPKPNMTRLRREDLL*GLQVNV Trigger: CACGTTGACCTGCAAACCCAAGAGCAGATCCTCTCT...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CCA 72 bp | TGTCTACAACCCAGAGGAGGGATGGAAACGACACCATaGACCAACATGTATTTGAAGAGACACTTCTGGACT | + |
|
Preference number: 3 (lower is better) Translates to: CLQPRGGMETTP*TNMYLKRHFWT Trigger: AGTCCAGAAGTGTCTCTTCAAATACATGTTGGTCCATGGTGTCGTTTCCATCCCTCCTCTGGGTTGTAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR TCA 72 bp | ATCAAGCCTCCGTCCCTCGGTGCTCTAGCAGCACAGTaGTTCTATTGGATGAGAGTTTTGTTCATATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: IKPPSLGALAAQ*FYWMRVLFIFV Trigger: GACAAATATGAACAAAACTCTCATCCAATAGAATCACTGTGCTGCTAGAGCACCGAGGGACGGAGGCTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR GCA 72 bp | ATAGGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTaGCAAATGCCAAAACCAAACATGACCAGGTTACGG | + |
|
Preference number: 3 (lower is better) Translates to: IGRHEQINLSGV*QMPKPNMTRLR Trigger: CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GCACAACACCCAGTGGGTGCCATGAGACCCTCATGGAAATACGGGATGGCAGGCCGATGCCCGGGCTTGTaGATGCCACCTCCCCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AQHPVGAMRPSWKYGMAGRCPGL*MPPPLL Trigger: CAGCAGGGGAGGTGGCATCCACAAGCCCGGGCATCG...GCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR GCA 90 bp | GTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCACAGTCTCACGCTCTGTAGCCCCACCCGTGAGCTGTaGAGGGCCAAAGCACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLLAGATGCVWHSLTLCSPTREL*RAKAQR Trigger: GCGCTGTGCTTTGGCCCTGCACAGCTCACGGGTGGG...GCTACAGAGCGTGAGACTGTGCCACACACATCCTGTTGCTCCTGCTAACAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR GCA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCCAAAGTCGGGGTCACTaGTGGAACTCCTGGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGQSRGH*WNSWED Trigger: GTCCTCCCAGGAGTTCCAGCAGTGACCCCGACTTTG...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | GCACAACACCCAGTGGGTGCCATGAGACCCTCATGGAAATACGGGATGGCAGGCGGTCTCAGGCAGCCTTaGCAGATGGGCAGGTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: AQHPVGAMRPSWKYGMAGGLRQP*QMGRLS Trigger: GGATAACCTGCCCATCTGTCAAGGCTGCCTGAGACC...GCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCGGGGGAAGTGGGCCTTaGACTTGGTCTGGAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGGGSGP*TWSGTF Trigger: GAATGTTCCAGACCAAGTTCAAGGCCCACTTCCCCC...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR GCA 90 bp | GCACAACACCCAGTGGGTGCCATGAGACCCTCATGGAAATACGGGATGGCAGGCCATCTGCAATGTCGATaGCCGGGCTTGTGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQHPVGAMRPSWKYGMAGHLQCR*PGLWMP Trigger: TGGCATCCACAAGCCCGGGCATCGACATTGCAGATG...GCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GCTTTCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCAAGCAAGGCACCGGGGTaGGCTGGACGACCAGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: AFRGAGSAVSRSNRMCVASKAPG*AGRPDK Trigger: CTTATCTGGTCGTCCAGCCCACCCCGGTGCCTTGCT...TGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GCTTTCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCAGTCAGGAGGGTCTCGTaGGTGCTGGGCCACGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFRGAGSAVSRSNRMCVAVRRVS*VLGHVC Trigger: ACAAACGTGGCCCAGCACCCACGAGACCCTCCTGAC...TGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGAAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCACAGTCTCACGCTCTGTAGCCCTGAAGCCATTCTCTaGGACGCCTGGGTCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: VLLAGATGCVWHSLTLCSPEAIL*DAWVST Trigger: TGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGG...GCTACAGAGCGTGAGACTGTGCCACACACATCCTGTTGCTCCTGCTAACAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | TTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACGGCAGCCTTGACAGATaGGCAGGTTATCCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKAPPLLLARPTVLLEMYGSLDR*AGYPMS Trigger: GGACATGGGATAACCTGCCCATCTGTCAAGGCTGCC...GTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACACTTGTAGTCACTGGTaGGGCTGTAGCCAGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LKAPPLLLARPTVLLEMYTCSHW*GCSQDH Trigger: GTGATCCTGGCTACAGCCTCACCAGTGACTACAAGT...GTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GAGTTGGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGGGAGCCGGGGTATGCTaGAGGGCTCTGGTCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ELACLSFPFSFKPPHPALGAGVC*RALVIH Trigger: GTGGATGACCAGAGCCCTCCAGCATACCCCGGCTCC...CAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CAA 72 bp | ACCCTTGAGTCTCATTTGAAAGCACCGCCTTTGCTGTaGGCCAGACCCACAGTCCTGCTGGAGATGTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLESHLKAPPLL*ARPTVLLEMYG Trigger: ACCGTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAAATGAGACTCAAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | TTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACCTCCATACTGGCAGGTaGTGTACTTGTAGTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKAPPLLLARPTVLLEMYLHTGR*CTCSHW Trigger: CCAGTGACTACAAGTACATCACCTGCCAGTATGGAG...GTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGCTCCGCTGGGGGTCCTaGAGCCATTCTCTGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: INLSGVCQMPKPNMTRLRLRWGS*SHSLGR Trigger: GCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGAG...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR GCA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGACCCGGAGCCGGGGTATaGTGGAGGGCTCTGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRPGAGV*WRALVI Trigger: GATGACCAGAGCCCTCCAGCATACCCCGGCTCCGGG...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR GCA 90 bp | GGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACGGAGGGTCTCGTGGGTaGTGGGCCACGTTTGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEQINLSGVCQMPKPNGGSRG*WATFVL Trigger: CAGAACAAACGTGGCCCAGCACCCACGAGACCCTCC...GTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGATTCCACGATCTTCCACGTaGTCAGGAGGGTCTCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LACLSFPFSFKPPHPALIPRSST*SGGSRG Trigger: CCCACGAGACCCTCCTGACCACGTGGAAGATCGTGG...AATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGAAGTCGGGGTCACTGCTaGAACTCCTGGGAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRSRGHC*NSWEDP Trigger: GGGGTCCTCCCAGGAGTTCCAGCAGTGACCCCGACT...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACAAGCACAGCGCCAGTTaGAACCACAGGATCACGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRHEQINLSGVCQMPKPNKHSAS*NHRITA Trigger: GGCCGTGATCCTGTGGTTTCAACTGGCGCTGTGCTT...GTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | ATAGGGGCTTGGCATGAAGAAATTTTCAGAAAGCGGAGTTGGCTTGTTTATCCTGGTCAGCACACACGTTaGGGTCATCGAACCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: IGAWHEEIFRKRSWLVYPGQHTR*GHRTHP Trigger: CGGGTGGGTTCGATGACCTCAACGTGTGTGCTGACC...AGGATAAACAAGCCAACTCCGCTTTCTGAAAATTTCTTCATGCCAAGCCCCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CAA 72 bp | TCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTaGATTGGCTGTCCAGGTGTAAGAGATGGTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFPFSFKPPHPA*IGCPGVRDGLS Trigger: ACTCAGACCATCTCTTACACCTGGACAGCCAATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACGCCTCGGGTGGCAGATaGAATCTCCGTGACTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GRHEQINLSGVCQMPKPNASGGR*NLRDLP Trigger: TGGTAAGTCACGGAGATTTCATCTGCCACCCGAGGC...GTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACACAGGGAAGGAGGTCTaGAACTCGGAGATGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: GRHEQINLSGVCQMPKPNTGKEV*NSEMFT Trigger: CGTGAACATCTCCGAGTTCCAGACCTCCTTCCCTGT...GTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGGGGTCTCGTGGGTGCTaGGCCACGTTTGTTCTGATT | + |
|
Preference number: 4 (lower is better) Translates to: INLSGVCQMPKPNMTRLRGSRGC*ATFVLI Trigger: AATCAGAACAAACGTGGCCCAGCACCCACGAGACCC...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGATTGCCTTGAACTTGGTCTaGAACATTCTGGCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LACLSFPFSFKPPHPALIALNLV*NILARM Trigger: CATCCTGGCCAGAATGTTCCAGACCAAGTTCAAGGC...AATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | ATAGGGGCTTGGCATGAAGAAATTTTCAGAAAGCGGAGTTGGCTTGTTTATCCTTATGCTGGAGGGCTCTaGTCATCCACAGGTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IGAWHEEIFRKRSWLVYPYAGGL*SSTGKG Trigger: TCCTTTACCTGTGGATGACCAGAGCCCTCCAGCATA...AGGATAAACAAGCCAACTCCGCTTTCTGAAAATTTCTTCATGCCAAGCCCCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| 3UTR CAA 72 bp | TCCGTCCCTCGGTGCTCTAGCAGCACAGTGATTCTATaGGATGAGAGTTTTGTTCATATTTGTCTACAACCC | + |
|
Preference number: 4 (lower is better) Translates to: SVPRCSSSTVIL*DESFVHICLQP Trigger: GGGTTGTAGACAAATATGAACAAAACTCTCATCCAATAGAATCACTGTGCTGCTAGAGCACCGAGGGACGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | ATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACATGACCAGGTTACGGAATCCGTCTTGGCAGTaGAATCGGGTTACTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: INLSGVCQMPKPNMTRLRNPSWQ*NRVTEL Trigger: AAGCTCAGTAACCCGATTTCACTGCCAAGACGGATT...CCGTAACCTGGTCATGTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCATGAGCAGATAAATTTGAGTGGAGTCTGCCAAATGCCAAAACCAAACCAGATGAAATCTCCGTaGCTTACCATAGGAGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GRHEQINLSGVCQMPKPNQMKSP*LTIGGS Trigger: ACTACCTCCTATGGTAAGTCACGGAGATTTCATCTG...GTTTGGTTTTGGCATTTGGCAGACTCCACTCAAATTTATCTGCTCATGCCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CCA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGATGTTCACGTAGCCATTaGAAGAGGCTAGAGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRCSRSH*KRLEVS Trigger: TGAGACCTCTAGCCTCTTCCAATGGCTACGTGAACA...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS CCA 90 bp | GGGTATGCTGGAGGGCTCTGGTCATCCACAGGTAAAGGACAGCCCTaGCCCACGGAGGCCGGGTACCCCGGGCCTAAGGCACTCGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: GYAGGLWSSTGKGQP*PTEAGYPGPKALEL Trigger: TAGCTCGAGTGCCTTAGGCCCGGGGTACCCGGCCTCCGTGGGCCAGGGCTGTCCTTTACCTGTGGATGACCAGAGCCCTCCAGCATACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS-3UTR CAA 90 bp | GCACAACACCCAGTGGGTGCCATGAGACCCTCATGGAAATACGGGATGGCAGGCTGTCGATGCCCGGGCTaGTGGATGCCACCTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AQHPVGAMRPSWKYGMAGCRCPG*WMPPPL Trigger: CAGGGGAGGTGGCATCCACAAGCCCGGGCATCGACA...GCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS CCA 90 bp | GAAAACTCCTCCGCTGGGGGTCCTGAAGCCATTCTCTGGGACGCCTaGGTCAGCACACACGTTGAGGTCATCGAACCCACCCGTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ENSSAGGPEAILWDA*VSTHVEVIEPTREL Trigger: CAGCTCACGGGTGGGTTCGATGACCTCAACGTGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGAGGAGTTTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS TCA 90 bp | AGGCACTCGAGCTACCGTTCACAGCCTCATCATAGGTCGGGAGCATaGCGGGCACTCCATCCACGACCACAAAGTCGGGGTCACTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RHSSYRSQPHHRSGA*RALHPRPQSRGHCW Trigger: CCAGCAGTGACCCCGACTTTGTGGTCGTGGATGGAGTGCCCGTCATGCTCCCGACCTATGATGAGGCTGTGAACGGTAGCTCGAGTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS CCA 90 bp | GCTTTCGAAGAAAACTCCTCCGCTGGGGGTCCTGAAGCCATTCTCTaGGACGCCTGGGTCAGCACACACGTTGAGGTCATCGAACCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AFEENSSAGGPEAIL*DAWVSTHVEVIEPT Trigger: GGTGGGTTCGATGACCTCAACGTGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGAGGAGTTTTCTTCGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACGGGTCAGCACACACGTaGAGGTCATCGAACCCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LKAPPLLLARPTVLLEMYGSAHT*RSSNPP Trigger: GGGTGGGTTCGATGACCTCAACGTGTGTGCTGACCC...GTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | TGCCAGACCACGCCTACAAACATGTCACCAGGGGGCAGCACAGAGCATAGGGGCCAGCCTGAATCCGTCTaGGCAGTGAAATCGGGTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CQTTPTNMSPGGSTEHRGQPESV*AVKSGY Trigger: GTAACCCGATTTCACTGCCAAGACGGATTCAGGCTG...GCCCCTATGCTCTGTGCTGCCCCCTGGTGACATGTTTGTAGGCGTGGTCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | GCACAACACCCAGTGGGTGCCATGAGACCCTCATGGAAATACGGGATGGCAGGCAAGTGGGCCTTGAACTaGGTCTGGAACATTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQHPVGAMRPSWKYGMAGKWALN*VWNILA Trigger: GGCCAGAATGTTCCAGACCAAGTTCAAGGCCCACTT...GCCTGCCATCCCGTATTTCCATGAGGGTCTCATGGCACCCACTGGGTGTTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | CCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACGGTATGAATCTCAGCATCTTCAATTaGGGGGATGCGGCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PPLLLARPTVLLEMYGMNLSIFN*GDAAVF Trigger: GAAGACTGCCGCATCCCCCAAATTGAAGATGCTGAG...ATTCATACCGTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS TCA 90 bp | AGAGCCCTTCAGCCTGAATCCGTCTTGGCAGTGAAATCGGGTTACTaGGCTTTCGAAGAAAACTCCTCCGCTGGGGGTCCTGAAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RALQPESVLAVKSGY*AFEENSSAGGPEAI Trigger: AATGGCTTCAGGACCCCCAGCGGAGGAGTTTTCTTCGAAAGCTCAGTAACCCGATTTCACTGCCAAGACGGATTCAGGCTGAAGGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS TCA 90 bp | CACAGCCTCTTTGTAGAGCCCTTCAGCCTGAATCCGTCTTGGCAGTaGAATCGGGTTACTGAGCTTTCGAAGAAAACTCCTCCGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLFVEPFSLNPSWQ*NRVTELSKKTPPLG Trigger: CCCCAGCGGAGGAGTTTTCTTCGAAAGCTCAGTAACCCGATTTCACTGCCAAGACGGATTCAGGCTGAAGGGCTCTACAAAGAGGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS-3UTR CAA 90 bp | GCTTTCAGAGGAGCAGGGAGTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCAGATGCGGCAGTCTTCTaGTATGCAGACAGGTTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AFRGAGSAVSRSNRMCVADAAVF*YADRFV Trigger: GACAAACCTGTCTGCATACAAGAAGACTGCCGCATC...TGCCACACACATCCTGTTGCTCCTGCTAACAGCACTCCCTGCTCCTCTGAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | GTGCTGTTAGCAGGAGCAACAGGATGTGTGTGGCACAGTCTCACGCTCTGTAGCGACGACCAGATAAGGTaGTGTAAGCACTCGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLLAGATGCVWHSLTLCSDDQIR*CKHSRF Trigger: GAACCTCGAGTGCTTACACAACCTTATCTGGTCGTC...GCTACAGAGCGTGAGACTGTGCCACACACATCCTGTTGCTCCTGCTAACAGCAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGCACCGCCTTTGCTGTTGGCCAGACCCACAGTCCTGCTGGAGATGTACCCGTGTCTGTACGTCTaGTTTCGAATCTCAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LKAPPLLLARPTVLLEMYPCLYV*FRISAS Trigger: AGATGCTGAGATTCGAAACAAGACGTACAGACACGG...GTACATCTCCAGCAGGACTGTGGGTCTGGCCAACAGCAAAGGCGGTGCTTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS GCA 90 bp | GTCTGTACGTCTTGTTTCGAATCTCAGCATCTTCAATTTGGGGGATaGGGCAGTCTTCTTGTATGCAGACAGGTTTGTCACTTGGGACCC | + |
|
Preference number: 5 (lower is better) Translates to: VCTSCFESQHLQFGG*GSLLVCRQVCHLGP Trigger: GGGTCCCAAGTGACAAACCTGTCTGCATACAAGAAGACTGCCGCATCCCCCAAATTGAAGATGCTGAGATTCGAAACAAGACGTACAGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||
| CDS-3UTR CAA 90 bp | TTGGCTTGTTTATCCTTTCCTTTCTCGTTCAAGCCGCCACATCCTGCTTTGATTAAAGCACAGCGCCAGTaGAAACCACAGGATCACGGC | + |
|
Preference number: 5 (lower is better) Translates to: LACLSFPFSFKPPHPALIKAQRQ*KPQDHG Trigger: GCCGTGATCCTGTGGTTTCAACTGGCGCTGTGCTTT...AATCAAAGCAGGATGTGGCGGCTTGAACGAGAAAGGAAAGGATAAACAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS-3UTR CAA 90 bp | TGGATGAGAGTTTTGTTCATATTTGTCTACAACCCAGAGGAGGGATGGAAACGACCTCCCCTGCTGTGCTaGAAATCGTGTCAGGGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: WMRVLFIFVYNPEEGWKRPPLLC*KSCQGC Trigger: ACACCCCTGACACGATTTCAAGCACAGCAGGGGAGG...TCGTTTCCATCCCTCCTCTGGGTTGTAGACAAATATGAACAAAACTCTCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085724.5 |
||
| CDS CCA 72 bp | GGAGGGCTCTGGTCATCCACAGGTAAAGGACAGCCCTaGCCCACGGAGGCCGGGTACCCCGGGCCTAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GGLWSSTGKGQP*PTEAGYPGPKA Trigger: TGCCTTAGGCCCGGGGTACCCGGCCTCCGTGGGCCAGGGCTGTCCTTTACCTGTGGATGACCAGAGCCCTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS TCA 72 bp | CCCGTGAGCTGTGCAGGGCCAAAGCACAGCGCCAGTTaGAACCACAGGATCACGGCCAAGAGTCTCTGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSCAGPKHSAS*NHRITAKSLWG Trigger: CCCCCAGAGACTCTTGGCCGTGATCCTGTGGTTTCAACTGGCGCTGTGCTTTGGCCCTGCACAGCTCACGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CCA 72 bp | TCCGCTGGGGGTCCTGAAGCCATTCTCTGGGACGCCTaGGTCAGCACACACGTTGAGGTCATCGAACCCACC | + |
|
Preference number: 6 (lower is better) Translates to: SAGGPEAILWDA*VSTHVEVIEPT Trigger: GGTGGGTTCGATGACCTCAACGTGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CAA 72 bp | AAGCCATTCTCTGGGACGCCTGGGTCAGCACACACGTaGAGGTCATCGAACCCACCCGTGAGCTGTGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: KPFSGTPGSAHT*RSSNPPVSCAG Trigger: CCCTGCACAGCTCACGGGTGGGTTCGATGACCTCAACGTGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CCA 72 bp | GAAAACTCCTCCGCTGGGGGTCCTGAAGCCATTCTCTaGGACGCCTGGGTCAGCACACACGTTGAGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ENSSAGGPEAIL*DAWVSTHVEVI Trigger: GATGACCTCAACGTGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGAGGAGTTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CAA 72 bp | GCAAGGCACCGGGGTGGGCTGGACGACCAGATAAGGTaGTGTAAGCACTCGAGGTTCTCGGAACCCTCGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ARHRGGLDDQIR*CKHSRFSEPSS Trigger: ACTCGAGGGTTCCGAGAACCTCGAGTGCTTACACAACCTTATCTGGTCGTCCAGCCCACCCCGGTGCCTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS TCA 72 bp | CTGAGCTTTCGAAGAAAACTCCTCCGCTGGGGGTCCTaGAGCCATTCTCTGGGACGCCTGGGTCAGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: LSFRRKLLRWGS*SHSLGRLGQHT Trigger: TGTGTGCTGACCCAGGCGTCCCAGAGAATGGCTTCAGGACCCCCAGCGGAGGAGTTTTCTTCGAAAGCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS TCA 72 bp | AGCTACCGTTCACAGCCTCATCATAGGTCGGGAGCATaGCGGGCACTCCATCCACGACCACAAAGTCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SYRSQPHHRSGA*RALHPRPQSRG Trigger: ACCCCGACTTTGTGGTCGTGGATGGAGTGCCCGTCATGCTCCCGACCTATGATGAGGCTGTGAACGGTAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS GCA 72 bp | ACACACGTTGAGGTCATCGAACCCACCCGTGAGCTGTaGAGGGCCAAAGCACAGCGCCAGTTGAAACCACAG | + |
|
Preference number: 6 (lower is better) Translates to: THVEVIEPTREL*RAKAQRQLKPQ Trigger: CTGTGGTTTCAACTGGCGCTGTGCTTTGGCCCTGCACAGCTCACGGGTGGGTTCGATGACCTCAACGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CCA 72 bp | GCGGGATCTCATCTGCAATGTCGATGCCCGGGCTTGTaGATGCCACCTCCCCTGCTGTGCTTGAAATCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGSHLQCRCPGL*MPPPLLCLKSC Trigger: ACACGATTTCAAGCACAGCAGGGGAGGTGGCATCCACAAGCCCGGGCATCGACATTGCAGATGAGATCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS CAA 90 bp | ACTTCCAGAGCAAGGCACCGGGGTGGGCTGGACGACCAGATAAGGTaGTGTAAGCACTCGAGGTTCTCGGAACCCTCGAGTTTAAATCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSRARHRGGLDDQIR*CKHSRFSEPSSLNP Trigger: TGGATTTAAACTCGAGGGTTCCGAGAACCTCGAGTGCTTACACAACCTTATCTGGTCGTCCAGCCCACCCCGGTGCCTTGCTCTGGAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS TCA 72 bp | CAGCCTGAATCCGTCTTGGCAGTGAAATCGGGTTACTaGGCTTTCGAAGAAAACTCCTCCGCTGGGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: QPESVLAVKSGY*AFEENSSAGGP Trigger: AGGACCCCCAGCGGAGGAGTTTTCTTCGAAAGCTCAGTAACCCGATTTCACTGCCAAGACGGATTCAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS TCA 72 bp | CGCTCACAAGGCCTCGGGTGGCAGATGAAATCTCCGTaGCTTACCATAGGAGGTAGTGGACAAACTTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSQGLGWQMKSP*LTIGGSGQTSR Trigger: TCTGGAAGTTTGTCCACTACCTCCTATGGTAAGTCACGGAGATTTCATCTGCCACCCGAGGCCTTGTGAGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 |
||
| CDS GCA 72 bp | CATCTTCAATTTGGGGGATGCGGCAGTCTTCTTGTATaGAGACAGGTTTGTCACTTGGGACCCAGCCTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLQFGGCGSLLV*RQVCHLGPSLG Trigger: CCCTAGGCTGGGTCCCAAGTGACAAACCTGTCTGCATACAAGAAGACTGCCGCATCCCCCAAATTGAAGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||
| CDS CAA 72 bp | TGGGGGATGCGGCAGTCTTCTTGTATGCAGACAGGTTaGTCACTTGGGACCCAGCCTAGGGTCCCATTAAAA | + |
|
Preference number: 6 (lower is better) Translates to: WGMRQSSCMQTG*SLGTQPRVPLK Trigger: TTTTAATGGGACCCTAGGCTGGGTCCCAAGTGACAAACCTGTCTGCATACAAGAAGACTGCCGCATCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||
| CDS CAA 72 bp | CTCAGCATCTTCAATTTGGGGGATGCGGCAGTCTTCTaGTATGCAGACAGGTTTGTCACTTGGGACCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LSIFNLGDAAVF*YADRFVTWDPA Trigger: GGCTGGGTCCCAAGTGACAAACCTGTCTGCATACAAGAAGACTGCCGCATCCCCCAAATTGAAGATGCTGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||
| CDS CAA 90 bp | CTCTCCGTGTCTGTACGTCTTGTTTCGAATCTCAGCATCTTCAATTaGGGGGATGCGGCAGTCTTCTTGTATGCAGACAGGTTTGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LSVSVRLVSNLSIFN*GDAAVFLYADRFVT Trigger: AGTGACAAACCTGTCTGCATACAAGAAGACTGCCGCATCCCCCAAATTGAAGATGCTGAGATTCGAAACAAGACGTACAGACACGGAGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||
| CDS TCA 72 bp | TTTGTAGAGCCCTTCAGCCTGAATCCGTCTTGGCAGTaGAATCGGGTTACTGAGCTTTCGAAGAAAACTCCT | + |
|
Preference number: 6 (lower is better) Translates to: FVEPFSLNPSWQ*NRVTELSKKTP Trigger: AGGAGTTTTCTTCGAAAGCTCAGTAACCCGATTTCACTGCCAAGACGGATTCAGGCTGAAGGGCTCTACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 ENSMUST00000193660.6 ENSMUST00000194981.2 |
||
| CDS CAA 72 bp | TCTGTACGTCTTGTTTCGAATCTCAGCATCTTCAATTaGGGGGATGCGGCAGTCTTCTTGTATGCAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: SVRLVSNLSIFN*GDAAVFLYADR Trigger: CCTGTCTGCATACAAGAAGACTGCCGCATCCCCCAAATTGAAGATGCTGAGATTCGAAACAAGACGTACAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000085724.5 ENSMUST00000153348.8 ENSMUST00000155229.7 |
||