Pregenerated sensors for SUSD3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021384Ensembl transcript IDs: ENSMUST00000021816.12, ENSMUST00000058196.13, ENSMUST00000119721.2, ENSMUST00000135784.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTTAATGTCAGCTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTaGCTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PLMSARLPMAPYAWR*LPWPMSSWANVDLQ Trigger: CTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTGACATTAAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| 3UTR GCA 90 bp | CCTGGTGGACACCCAAGGTTGTTCTGTGACTTCCACCGTCATACTTaGATGCATTCGTGCATGTTCACGCACACCTTCACGGCCCAGCTA | + |
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Preference number: 1 (lower is better) Translates to: PGGHPRLFCDFHRHT*MHSCMFTHTFTAQL Trigger: TAGCTGGGCCGTGAAGGTGTGCGTGAACATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR GCA 90 bp | TGGCAGCTCCAAATGCCACCAACACAACAGACTGGCATATGCGTATaGAGGTCCACTAAGTGTTCCCCGTATGTGGACAGGGACGTGGTG | + |
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Preference number: 1 (lower is better) Translates to: WQLQMPPTQQTGICV*RSTKCSPYVDRDVV Trigger: CACCACGTCCCTGTCCACATACGGGGAACACTTAGTGGACCTGCATACGCATATGCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR GCA 90 bp | CATCTGTGGCAGCTCCAAATGCCACCAACACAACAGACTGGCATATaGGTATGCAGGTCCACTAAGTGTTCCCCGTATGTGGACAGGGAC | + |
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Preference number: 1 (lower is better) Translates to: HLWQLQMPPTQQTGI*VCRSTKCSPYVDRD Trigger: GTCCCTGTCCACATACGGGGAACACTTAGTGGACCTGCATACGCATATGCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCACAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 90 bp | CACAACAAAACAATAAGAAAGAGGTGTCAATTACTGCCAGATGTGTaGTGTACAGGTGCAGGGATGCACATCTGGAATCCTAGGTCCACA | + |
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Preference number: 1 (lower is better) Translates to: HNKTIRKRCQLLPDV*CTGAGMHIWNPRST Trigger: TGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATCTGGCAGTAATTGACACCTCTTTCTTATTGTTTTGTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGGGCGTCATGCCTGGAGGTGACTaGCCTGGCCCATGTCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SPQLTDEVLGVLASRRGVMPGGD*PGPCPA Trigger: AGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCAT...GACGCCCCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGGTGCAGGGATGCACATCTGGAATCCTAGGTCCACATCTGCGAGGGTAGTGGGAGTGGGGGAAACATaGGAACATGAGTTCCAATTC | + |
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Preference number: 2 (lower is better) Translates to: TGAGMHIWNPRSTSARVVGVGET*EHEFQF Trigger: GAATTGGAACTCATGTTCTCATGTTTCCCCCACTCC...CACTACCCTCGCAGATGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR GCA 90 bp | CAATTACTGCCAGATGTGTGGTGTACAGGTGCAGGGATGCACATCTGGAATCCTCACGGCCCAGCTATATaGCTCAGAATCCCAGGAACA | + |
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Preference number: 2 (lower is better) Translates to: QLLPDVWCTGAGMHIWNPHGPAI*LRIPGT Trigger: TGTTCCTGGGATTCTGAGGCATATAGCTGGGCCGTG...AGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATCTGGCAGTAATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR CCA 90 bp | GTCACCCATCTGTGGCAGCTCCAAATGCCACCAACACAACAGACTGGCATATGCTGGAGACAGTATTCCTaGTGGACACCCAAGGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: VTHLWQLQMPPTQQTGICWRQYS*WTPKVV Trigger: AACAACCTTGGGTGTCCACCAGGAATACTGTCTCCA...GCATATGCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCACAGATGGGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CAA 90 bp | ACACAGACAAGAGGTGGAGACAGTATTCCTGGTGGACACCCAAGGTaGTTCTGTGACTTCCACCGTCATACTTGCATGCATTCGTGCATG | + |
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Preference number: 2 (lower is better) Translates to: TQTRGGDSIPGGHPR*FCDFHRHTCMHSCM Trigger: CATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGTCTCCACCTCTTGTCTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTATTCCTGGTGGACACCCAAGGTTGTTCTGTGACTTCCACCGTCATACTTGGAACAACATATGCATaGGGAGAGATGGAGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TVFLVDTQGCSVTSTVILGTTYA*GEMELW Trigger: CCACAGCTCCATCTCTCCTCATGCATATGTTGTTCC...AAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTCCAGGAACAGAATGGGAGTCATCAGACTTGACAGTGGGCCCTTTTTACACTTGCATGCATTCGTaGATGTTCACGCACACCTTC | + |
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Preference number: 2 (lower is better) Translates to: WVPGTEWESSDLTVGPFYTCMHS*MFTHTF Trigger: GAAGGTGTGCGTGAACATGCACGAATGCATGCAAGT...GTAAAAAGGGCCCACTGTCAAGTCTGATGACTCCCATTCTGTTCCTGGAACCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR CCA 90 bp | CACATGATGGGTAGGGTCACCCATCTGTGGCAGCTCCAAATGCCACCAACACAAACTCGTGTAAAAAGCTaGACACACCATGTGAGCATA | + |
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Preference number: 2 (lower is better) Translates to: HMMGRVTHLWQLQMPPTQTRVKS*THHVSI Trigger: TATGCTCACATGGTGTGTCCAGCTTTTTACACGAGT...TTGTGTTGGTGGCATTTGGAGCTGCCACAGATGGGTGACCCTACCCATCATGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAACAATAAGAAAGAGGTGTCAATTACTGCCAGATGTGTGGTGTACAGGTGCAGGGACGTGGTGGAGTaGGGGAAACATGAGAACATG | + |
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Preference number: 2 (lower is better) Translates to: QNNKKEVSITARCVVYRCRDVVE*GKHENM Trigger: CATGTTCTCATGTTTCCCCCACTCCACCACGTCCCT...GCACCTGTACACCACACATCTGGCAGTAATTGACACCTCTTTCTTATTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | AGTGATGCTCACATGATGGGTAGGGTCACCCATCTGTaGCAGCTCCAAATGCCACCAACACAACAGACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SDAHMMGRVTHL*QLQMPPTQQTG Trigger: GCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCACAGATGGGTGACCCTACCCATCATGTGAGCATCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | CCAGATGTGTGGTGTACAGGTGCAGGGATGCACATCTaGAATCCTAGGTCCACATCTGCGAGGGTAGTGATG | + |
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Preference number: 3 (lower is better) Translates to: PDVWCTGAGMHI*NPRSTSARVVM Trigger: CATCACTACCCTCGCAGATGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | CATCACAGGATACTGTGGTGGTCAGAGGACAACTTGTaGGAGTCAGTTCTCGCCTTCCACTGTGTGGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: HHRILWWSEDNL*ESVLAFHCVGS Trigger: GGAACCCACACAGTGGAAGGCGAGAACTGACTCCCACAAGTTGTCCTCTGACCACCACAGTATCCTGTGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCCCAGTAGCAGTTCATaGAGCAGGTCCTGTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: PFLSPQLTDEVLGVLASRPSSSS*SRSCNS Trigger: GCTGTTACAGGACCTGCTCAATGAACTGCTACTGGG...CCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| 3UTR GCA 72 bp | CAAGGTTGTTCTGTGACTTCCACCGTCATACTTGCATaGATTCGTGCATGTTCACGCACACCTTCACGGCCC | + |
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Preference number: 3 (lower is better) Translates to: QGCSVTSTVILA*IRACSRTPSRP Trigger: GGGCCGTGAAGGTGTGCGTGAACATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | AAGTGTTCCCCGTATGTGGACAGGGACGTGGTGGAGTaGGGGAAACATGAGAACATGAGTTCCAATTCCCAG | + |
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Preference number: 3 (lower is better) Translates to: KCSPYVDRDVVE*GKHENMSSNSQ Trigger: CTGGGAATTGGAACTCATGTTCTCATGTTTCCCCCACTCCACCACGTCCCTGTCCACATACGGGGAACACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR GCA 72 bp | CACCCAAGGTTGTTCTGTGACTTCCACCGTCATACTTaGATGCATTCGTGCATGTTCACGCACACCTTCACG | + |
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Preference number: 3 (lower is better) Translates to: HPRLFCDFHRHT*MHSCMFTHTFT Trigger: CGTGAAGGTGTGCGTGAACATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR GCA 72 bp | TTCTGTGACTTCCACCGTCATACTTGCATGCATTCGTaGATGTTCACGCACACCTTCACGGCCCAGCTATAT | + |
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Preference number: 3 (lower is better) Translates to: FCDFHRHTCMHS*MFTHTFTAQLY Trigger: ATATAGCTGGGCCGTGAAGGTGTGCGTGAACATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | AGCATAATCCCAGCACTGTCTCACACAGACAAGAGGTaGAGACAGTATTCCTGGTGGACACCCAAGGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: SIIPALSHTDKR*RQYSWWTPKVV Trigger: AACAACCTTGGGTGTCCACCAGGAATACTGTCTCCACCTCTTGTCTGTGTGAGACAGTGCTGGGATTATGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR TCA 72 bp | AGACAGTATTCCTGGTGGACACCCAAGGTTGTTCTGTaGCTTCCACCGTCATACTTGCATGCATTCGTGCAT | + |
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Preference number: 3 (lower is better) Translates to: RQYSWWTPKVVL*LPPSYLHAFVH Trigger: ATGCACGAATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| 3UTR CCA 72 bp | ACAATAAGAAAGAGGTGTCAATTACTGCCAGATGTGTaGTGTACAGGTGCAGGGATGCACATCTGGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: TIRKRCQLLPDV*CTGAGMHIWNP Trigger: AGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATCTGGCAGTAATTGACACCTCTTTCTTATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| CDS-3UTR CCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTAGGTGCCTGGCGAGCTaGAGCAGCCACCAGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRRCLAS*SSHQGP Trigger: CGGGCCCTGGTGGCTGCTCCAGCTCGCCAGGCACCT...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCACACTGGGGCCACCATTaGCACCACCGACGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPHWGHH*HHRRCC Trigger: GCAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTG...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTCCAGACCCCACCATCTaGTGGCCAGAGGGGCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRPDPTI*WPEGQW Trigger: CCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGG...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR TCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCACTAGGGCCAGGCAGGTaGCCTTGGAGAGTGACAGCC | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPLGPGR*PWRVTA Trigger: GGCTGTCACTCTCCAAGGTCACCTGCCTGGCCCTAG...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021816.12 |
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| CDS-3UTR TCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCATGGGCCTGGCTGTGCTaGATTCCTGGCTTGCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPWAWLC*IPGLPP Trigger: TGGCGGCAAGCCAGGAATTCAGCACAGCCAGGCCCA...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | TCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGGGCGTCAGGTGCCTGGCGAGCTaGAGCAGCCACCAGGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: SPQLTDEVLGVLASRRGVRCLAS*SSHQGP Trigger: CGGGCCCTGGTGGCTGCTCCAGCTCGCCAGGCACCT...GACGCCCCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTCATCACGTAGGTGCCTaGCGAGCTGGAGCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRHHVGA*RAGAAT Trigger: GGTGGCTGCTCCAGCTCGCCAGGCACCTACGTGATG...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR TCA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGGGCGGGGGATGGAGCTaGGCACAGGTGCCTTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: PGPCPAGQTLTCRPLASGGGGWS*AQVPLD Trigger: GTCCAAAGGCACCTGTGCTCAGCTCCATCCCCCGCC...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000021816.12 |
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| CDS-3UTR TCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCACACAGGGCTTCCTaGAGACCAGTCAACGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPAHRAS*RPVNGA Trigger: AGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGC...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | CAGCTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTGCGGTGGCACAGCTTTaGACACAGGGCTTCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: QLGSRWPPMPGGDCPGPCAVAQL*TQGFLK Trigger: CTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGC...ACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | TCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGGGCGTCCACTGGGGCCACCATTaGCACCACCGACGCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SPQLTDEVLGVLASRRGVHWGHH*HHRRCC Trigger: GCAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTG...GACGCCCCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGGGTCACACCAGCCTaGTCTCTGATGTCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRWVTPA*SLMSPG Trigger: CCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCA...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGTGCTGAATTCCTaGCTTGCCGCCACCACCACT | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPAVLNS*LAATTT Trigger: AGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGC...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTGCCTGTCTGGTTCACTaGGACAGGCGTTGTGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRACLVH*DRRCVP Trigger: GGGAACACAACGCCTGTCCCAGTGAACCAGACAGGC...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR TCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTAGGGGCAGTGGAATATaGGCACAGTCCCCAGAGATG | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRRGSGI*AQSPEM Trigger: CATCTCTGGGGACTGTGCTCATATTCCACTGCCCCT...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCACAGTCCCCAGAGATGTaGCATCTCCACGGACGACTT | + |
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Preference number: 4 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPQSPEM*HLHGRL Trigger: AAGTCGTCCGTGGAGATGGCACATCTCTGGGGACTG...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGGCTGAATTCCTGGCTTaGCGCCACCACCACTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: PGPCPAGQTLTCRPLASGAEFLA*RHHHWG Trigger: GCCCCAGTGGTGGTGGCGGCAAGCCAGGAATTCAGC...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | GGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTCTGTGGTGAAGCTGTaGTTGTCATGGGCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPLCLEVTALAHVQLGKRSVVKL*LSWAWL Trigger: CAGCCAGGCCCATGACAACCACAGCTTCACCACAGA...ACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGCATCACGTAGGTGCCTaGCGAGCTGGAGCAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: PGPCPAGQTLTCRPLASGHHVGA*RAGAAT Trigger: GGTGGCTGCTCCAGCTCGCCAGGCACCTACGTGATG...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CCA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGGACCCCACCATCTGGTaGCCAGAGGGGCAGTGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PGPCPAGQTLTCRPLASGDPTIW*PEGQWN Trigger: ATTCCACTGCCCCTCTGGCCACCAGATGGTGGGGTC...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR TCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCACCAGGGTCTGTGGTaGAGCTGTGGTTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPHQGLW*SCGCHG Trigger: CCCATGACAACCACAGCTTCACCACAGACCCTGGTG...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTGCGGTGGCACAGCTTTaGACACAGGGCTTCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPAVAQL*TQGFLK Trigger: CTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGC...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTTGGGTCACACCAGCCTaGTCTCTGATGTCACCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPWVTPA*SLMSPG Trigger: CCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCA...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGCCAGACCCCACCATCTaGTGGCCAGAGGGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPQLTDEVLGVLASRRPDPTI*WPEGQW Trigger: CCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGG...CCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR CCA 90 bp | GTCACCCATCTGTGGCAGCTCCAAATGCCACCAACACAACAGACTGGCATATGCCCAGACCCCACCATCTaGTGGCCAGAGGGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VTHLWQLQMPPTQQTGICPDPTI*WPEGQW Trigger: CCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGG...GCATATGCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCACAGATGGGTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCCGGAGTTCCCATCCTaGAAGTCCAAGGGTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPPEFPS*KSKGLC Trigger: ACAAAGACCCTTGGACTTTCAGGATGGGAACTCCGG...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCGCCGCTCATTTTTCTaGACACACTTGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPRRSFF*THLRRQ Trigger: CTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCG...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTTGCCACCACCGACGCTaGTGCTGTTATTGTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPCHHRR*CCYCGC Trigger: ACAACCACAATAACAGCAGCAGCGTCGGTGGTGGCA...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPNGGDH*HLKAEG Trigger: ACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATT...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGGCTGTGCTGAATTCCTaGCTTGCCGCCACCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: FLSPQLTDEVLGVLASRRAVLNS*LAATTT Trigger: AGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGC...CCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR TCA 90 bp | CACTGTCTCACACAGACAAGAGGTGGAGACAGTATTCCTGGTGGACACCCAAGGGCACACAGGGCTTCCTaGAGACCAGTCAACGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCLTQTRGGDSIPGGHPRAHRAS*RPVNGA Trigger: AGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGC...CCTTGGGTGTCCACCAGGAATACTGTCTCCACCTCTTGTCTGTGTGAGACAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGCGGTCTGTGGTGAAGCTGTaGTTGTCATGGGCCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLSPQLTDEVLGVLASRRSVVKL*LSWAWL Trigger: CAGCCAGGCCCATGACAACCACAGCTTCACCACAGA...CCGCCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGTGGCAGCTCCAAATGCCACCAACACAACAGACTGGCATATGCGTATGCAGACCCCACCATCTGGTaGCCAGAGGGGCAGTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ICGSSKCHQHNRLAYAYADPTIW*PEGQWN Trigger: ATTCCACTGCCCCTCTGGCCACCAGATGGTGGGGTC...TGCATACGCATATGCCAGTCTGTTGTGTTGGTGGCATTTGGAGCTGCCACAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR CCA 90 bp | GATGTGTGGTGTACAGGTGCAGGGATGCACATCTGGAATCCTAGGTCCACATCTGCCTGTCTGGTTCACTaGGACAGGCGTTGTGTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVWCTGAGMHIWNPRSTSACLVH*DRRCVP Trigger: GGGAACACAACGCCTGTCCCAGTGAACCAGACAGGC...AGATGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| 3UTR CAA 72 bp | GTGACTTCTTCGGGACATCACCCCAGTAGCAGTTCATaGAGCAGGTCCTGTAACAGCCACAGAGGAGACCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTSSGHHPSSSS*SRSCNSHRGDL Trigger: GAGGTCTCCTCTGTGGCTGTTACAGGACCTGCTCAATGAACTGCTACTGGGGTGATGTCCCGAAGAAGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| 3UTR CAA 72 bp | GTGCATCACAGGATACTGTGGTGGTCAGAGGACAACTaGTGGGAGTCAGTTCTCGCCTTCCACTGTGTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VHHRILWWSEDN*WESVLAFHCVG Trigger: ACCCACACAGTGGAAGGCGAGAACTGACTCCCACAAGTTGTCCTCTGACCACCACAGTATCCTGTGATGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR TCA 90 bp | GATGTGTGGTGTACAGGTGCAGGGATGCACATCTGGAATCCTAGGTCCACATCTAGGGGCAGTGGAATATaGGCACAGTCCCCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DVWCTGAGMHIWNPRSTSRGSGI*AQSPEM Trigger: CATCTCTGGGGACTGTGCTCATATTCCACTGCCCCT...AGATGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGTACACCACACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGTGCCACCACCGACGCTaGTGCTGTTATTGTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLSPQLTDEVLGVLASRCHHRR*CCYCGC Trigger: ACAACCACAATAACAGCAGCAGCGTCGGTGGTGGCA...CCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| 3UTR CAA 72 bp | GTGTGGGTTCCAGGAACAGAATGGGAGTCATCAGACTaGACAGTGGGCCCTTTTTACCCACTGAGCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VWVPGTEWESSD*TVGPFYPLSLL Trigger: GAGAAGGCTCAGTGGGTAAAAAGGGCCCACTGTCAAGTCTGATGACTCCCATTCTGTTCCTGGAACCCACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR GCA 90 bp | CCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFLSPQLTDEVLGVLASRNGGDH*HLKAEG Trigger: ACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATT...CCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCTCACACAGACAAGAGGTGGAGACAGTATTCCTGGTGGACACCCAAGGTTCGCCGCTCATTTTTCTaGACACACTTGAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHTDKRWRQYSWWTPKVRRSFF*THLRRQ Trigger: CTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCG...AACCTTGGGTGTCCACCAGGAATACTGTCTCCACCTCTTGTCTGTGTGAGACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAACACATCCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGCACACAGGGCTTCCTaGAGACCAGTCAACGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AKKTHPFLSPQLTDEVLGAHRAS*RPVNGA Trigger: AGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGC...CCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGATGTGTTTTCTTTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAACACATCCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGCACCAGGGTCTGTGGTaGAGCTGTGGTTGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKKTHPFLSPQLTDEVLGHQGLW*SCGCHG Trigger: CCCATGACAACCACAGCTTCACCACAGACCCTGGTG...CCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGATGTGTTTTCTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
||
| CDS-3UTR GCA 90 bp | GTGGAGTGGGGGAAACATGAGAACATGAGTTCCAATTCCCAGAACTCGTGTAAACAGTCCCCAGAGATGTaGCATCTCCACGGACGACTT | + |
|
Preference number: 4 (lower is better) Translates to: VEWGKHENMSSNSQNSCKQSPEM*HLHGRL Trigger: AAGTCGTCCGTGGAGATGGCACATCTCTGGGGACTG...TTTACACGAGTTCTGGGAATTGGAACTCATGTTCTCATGTTTCCCCCACTCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR GCA 90 bp | GAGACAGTATTCCTGGTGGACACCCAAGGTTGTTCTGTGACTTCCACCGTCATAAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETVFLVDTQGCSVTSTVINGGDH*HLKAEG Trigger: ACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATT...TATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| 3UTR CAA 72 bp | AGAGGTGGAGACAGTATTCCTGGTGGACACCCAAGGTaGTTCTGTGACTTCCACCGTCATACTTGCATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RGGDSIPGGHPR*FCDFHRHTCMH Trigger: ATGCATGCAAGTATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGTCTCCACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAGAAAACACATCCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGAGGGGCAGTGGAATATaGGCACAGTCCCCAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: AKKTHPFLSPQLTDEVLGRGSGI*AQSPEM Trigger: CATCTCTGGGGACTGTGCTCATATTCCACTGCCCCT...CCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGATGTGTTTTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR GCA 90 bp | GCAAAGAAAACACATCCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGCAGTCCCCAGAGATGTaGCATCTCCACGGACGACTT | + |
|
Preference number: 4 (lower is better) Translates to: AKKTHPFLSPQLTDEVLGQSPEM*HLHGRL Trigger: AAGTCGTCCGTGGAGATGGCACATCTCTGGGGACTG...CCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGGATGTGTTTTCTTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR CAA 90 bp | CAGCTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCACTGGGGCCACCATaGCCACCACCGACGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QLGSRWPPMPGGDCPGPCPLGPP*PPPTLL Trigger: CAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTGG...ACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCACCACTGGGGCCACCATaGCCACCACCGACGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPPLGPP*PPPTLL Trigger: CAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTGG...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAGACTTGCAAGGTGCCTaGAGGCGGGGGATGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPDLQGA*RRGMEL Trigger: CAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTC...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTGTGGTGAAGCTGTGGTaGTCATGGGCCTGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QLGSRWPPMPGGDCPGPCVVKLW*SWAWLC Trigger: GCACAGCCAGGCCCATGACAACCACAGCTTCACCAC...ACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS TCA 90 bp | GGCTTCCTGAAGACCAGTCAACGGTGCTCCCATTCCAGGCACAAGTaGGGAGGCCAGACCCCACCATCTGGTGGCCAGAGGGGCAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFLKTSQRCSHSRHK*GGQTPPSGGQRGSG Trigger: TCCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGGCCTCCTCACTTGTGCCTGGAATGGGAGCACCGTTGACTGGTCTTCAGGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
||
| CDS CCA 90 bp | CATGGGCCTGGCTGTGCTGAATTCCTGGCTTGCCGCCACCACCACTaGGGCCACCATTGCCACCACCGACGCTGCTGCTGTTATTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: HGPGCAEFLACRHHH*GHHCHHRRCCCYCG Trigger: ACCACAATAACAGCAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGCCAGGCCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000135784.2 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTGCCCAAGTAGGCAGCTaGTACCGTCTCCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPAQVGS*YRLQVL Trigger: GAGGACCTGGAGACGGTACAAGCTGCCTACTTGGGC...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGGCCCAAGTAGGCAGCTaGTACCGTCTCCAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPCPAGQTLTCRPLASGAQVGS*YRLQVL Trigger: GAGGACCTGGAGACGGTACAAGCTGCCTACTTGGGC...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGGTGGTGAAGCTGTGGTaGTCATGGGCCTGGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGPCPAGQTLTCRPLASGVVKLW*SWAWLC Trigger: GCACAGCCAGGCCCATGACAACCACAGCTTCACCAC...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTCCAAAAGTCCAAGGGTCTTaGTCCACACTGTGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: LGSRWPPMPGGDCPGPCPKVQGS*STLWVT Trigger: TGTGACCCACAGTGTGGACAAAGACCCTTGGACTTT...TGGACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CAGCTAGGCTCCCGATGGCCCCCTATGCCTGGAGGTGACTGCCCTGGCCCATGTAAAGTCCAAGGGTCTTaGTCCACACTGTGGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: QLGSRWPPMPGGDCPGPCKVQGS*STLWVT Trigger: TGTGACCCACAGTGTGGACAAAGACCCTTGGACTTT...ACATGGGCCAGGGCAGTCACCTCCAGGCATAGGGGGCCATCGGGAGCCTAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS TCA 90 bp | GCCGAAGGTCTCATGCGGTGGCACAGCTTTGCACACAGGGCTTCCTaGAGACCAGTCAACGGTGCTCCCATTCCAGGCACAAGTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: AEGLMRWHSFAHRAS*RPVNGAPIPGTSEE Trigger: CTCCTCACTTGTGCCTGGAATGGGAGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGCATGAGACCTTCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGTGCAGGGATGCACATCTGGAATCCTAGGTCCACATCTGCGAGGGTAGTGTCACTGGGACAGGCGTaGTGTTCCCAGCACGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TGAGMHIWNPRSTSARVVSLGQA*CSQHAT Trigger: GGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTGA...CACTACCCTCGCAGATGTGGACCTAGGATTCCAGATGTGCATCCCTGCACCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS GCA 90 bp | TACCAGAGTTGTGCCGTCCTGTCAGCACGCCGCCGCTCATTTTTCTaGACACACTTGAGGAGGCAGCAGGTGAGGAAGGCCATGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: YQSCAVLSARRRSFF*THLRRQQVRKAMDM Trigger: CATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCGGCGTGCTGACAGGACGGCACAACTCTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000135784.2 |
||
| CDS GCA 90 bp | GACATGAGGCCACTGTACCTGTCAGCACGCCGCCGCTCATTTTTCTaGACACACTTGAGGAGGCAGCAGGTGAGGAAGGCCATGGACATG | + |
|
Preference number: 5 (lower is better) Translates to: DMRPLYLSARRRSFF*THLRRQQVRKAMDM Trigger: CATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCGGCGTGCTGACAGGTACAGTGGCCTCATGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
||
| CDS GCA 90 bp | CTCACAATGGAGGCGATCACTGCCACCTTAAAGCCGAAGGTCTCATaGGGTGGCACAGCTTTGGACTCTAGGGCCAGGCAGGTGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LTMEAITATLKPKVS*GGTALDSRARQVTL Trigger: CAAGGTCACCTGCCTGGCCCTAGAGTCCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135784.2 |
||
| CDS CCA 90 bp | CCCGGAGTTCCCATCCTGAAAGTCCAAGGGTCTTTGTCCACACTGTaGGTCACACCAGCCTGCTCTCTGATGTCACCAGGGTCTGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PGVPILKVQGSLSTL*VTPACSLMSPGSVV Trigger: CACCACAGACCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCACAGTGTGGACAAAGACCCTTGGACTTTCAGGATGGGAACTCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
||
| CDS-3UTR CAA 90 bp | CCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGGACTTGCAAGGTGCCTaGAGGCGGGGGATGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: PFLSPQLTDEVLGVLASRDLQGA*RRGMEL Trigger: CAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTC...CCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS-3UTR CAA 90 bp | CCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTCTGGCTAGTGGGTTTTTCTGCACACACTaGAGGAGGCAGCAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: PGPCPAGQTLTCRPLASGFFCTH*RRQQVR Trigger: CCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAA...CCCACTAGCCAGAGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CAA 90 bp | GGAGGTGACTGCCCTGGCCCATGTCCAGCTGGGCAAACGTTGACTTGCAGACCTTTTTTCTGCACACACTaGAGGAGGCAGCAGGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: GGDCPGPCPAGQTLTCRPFFCTH*RRQQVR Trigger: CCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAA...AGGTCTGCAAGTCAACGTTTGCCCAGCTGGACATGGGCCAGGGCAGTCACCTCC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS-3UTR CAA 90 bp | CCATTTCTCTCACCACAGTTGACAGATGAAGTTCTGGGGGTCCTGGCTTCCAGGTCACTGGGACAGGCGTaGTGTTCCCAGCACGCCACC | + |
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Preference number: 5 (lower is better) Translates to: PFLSPQLTDEVLGVLASRSLGQA*CSQHAT Trigger: GGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTGA...CCTGGAAGCCAGGACCCCCAGAACTTCATCTGTCAACTGTGGTGAGAGAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058196.13 |
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| CDS GCA 90 bp | CTCACAATGGAGGCGATCACTGCCACCTTAAAGCCGAAGGTCTCATaGGGTGGCACAGCTTTGCACACAGGGCTTCCTGAAGACCAGTCA | + |
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Preference number: 5 (lower is better) Translates to: LTMEAITATLKPKVS*GGTALHTGLPEDQS Trigger: TGACTGGTCTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS GCA 90 bp | GGACATGAGCAGGATGATGGCACAGCTCACAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGTCTCATGCGGTGGCACAGCTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: GHEQDDGTAHNGGDH*HLKAEGLMRWHSFA Trigger: TGCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAGCTGTGCCATCATCCTGCTCATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS GCA 90 bp | GGACATGAGCAGGATGATGGCACAGCTCACAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGTCTCATGCGGTGGCACAGCTTTGGA | + |
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Preference number: 5 (lower is better) Translates to: GHEQDDGTAHNGGDH*HLKAEGLMRWHSFG Trigger: TCCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAGCTGTGCCATCATCCTGCTCATGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135784.2 |
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| CDS-3UTR CAA 90 bp | GAGACAGTATTCCTGGTGGACACCCAAGGTTGTTCTGTGACTTCCACCGTCATAGACTTGCAAGGTGCCTaGAGGCGGGGGATGGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: ETVFLVDTQGCSVTSTVIDLQGA*RRGMEL Trigger: CAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTC...TATGACGGTGGAAGTCACAGAACAACCTTGGGTGTCCACCAGGAATACTGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| CDS CAA 72 bp | GAGCACAGGTGCCTGTCTGGTTCACTGGGACAGGCGTaGTGTTCCCAGCACGCCACCGCGGCCTCGCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: EHRCLSGSLGQA*CSQHATAASLG Trigger: GCCGAGCGAGGCCGCGGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTGAACCAGACAGGCACCTGTGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS CCA 72 bp | GGCTGTGCTGAATTCCTGGCTTGCCGCCACCACCACTaGGGCCACCATTGCCACCACCGACGCTGCTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GCAEFLACRHHH*GHHCHHRRCCC Trigger: ACAGCAGCAGCGTCGGTGGTGGCAATGGTGGCCCCAGTGGTGGTGGCGGCAAGCCAGGAATTCAGCACAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000135784.2 |
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| CDS CCA 72 bp | GGGATGGAGCTGAGCACAGGTGCCTGTCTGGTTCACTaGGACAGGCGTTGTGTTCCCAGCACGCCACCGCGG | + |
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Preference number: 6 (lower is better) Translates to: GMELSTGACLVH*DRRCVPSTPPR Trigger: CCGCGGTGGCGTGCTGGGAACACAACGCCTGTCCCAGTGAACCAGACAGGCACCTGTGCTCAGCTCCATCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS GCA 72 bp | CACTTTGGGCCTCCCAGGATTTCCAGGGGCCAGCCCTaGAGAGTTCAACGCGTGGACCATCACGTAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: HFGPPRISRGQP*RVQRVDHHVGA Trigger: GGCACCTACGTGATGGTCCACGCGTTGAACTCTGCAGGGCTGGCCCCTGGAAATCCTGGGAGGCCCAAAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS GCA 72 bp | AGGTGCCTTGAGGCGGGGGATGGAGCTGAGCACAGGTaGCTGTCTGGTTCACTGGGACAGGCGTTGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: RCLEAGDGAEHR*LSGSLGQALCS Trigger: GGAACACAACGCCTGTCCCAGTGAACCAGACAGGCACCTGTGCTCAGCTCCATCCCCCGCCTCAAGGCACCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS CAA 72 bp | CACAGTCCCCAGAGATGTGCCATCTCCACGGACGACTaGCAAGGTGCCTTGAGGCGGGGGATGGAGCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: HSPQRCAISTDD*QGALRRGMELS Trigger: GCTCAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTCGTCCGTGGAGATGGCACATCTCTGGGGACTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS CAA 72 bp | AGATGTGCCATCTCCACGGACGACTTGCAAGGTGCCTaGAGGCGGGGGATGGAGCTGAGCACAGGTGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: RCAISTDDLQGA*RRGMELSTGAC Trigger: ACAGGCACCTGTGCTCAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTCGTCCGTGGAGATGGCACATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS TCA 72 bp | AGCTGGAGCAGCCACCAGGGCCCGGAGTTCCCATCCTaGAAGTCCAAGGGTCTTTGTCCACACTGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SWSSHQGPEFPS*KSKGLCPHCGS Trigger: TGACCCACAGTGTGGACAAAGACCCTTGGACTTTCAGGATGGGAACTCCGGGCCCTGGTGGCTGCTCCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS CCA 72 bp | TTCCAGGCACAAGTGAGGAGGCCAGACCCCACCATCTaGTGGCCAGAGGGGCAGTGGAATATGAGCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: FQAQVRRPDPTI*WPEGQWNMSTV Trigger: GACTGTGCTCATATTCCACTGCCCCTCTGGCCACCAGATGGTGGGGTCTGGCCTCCTCACTTGTGCCTGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS CAA 72 bp | AGATGTGCCATCTCCACGGACGACTTGCAAGGTGCCTaGAGGCGGGGGATGGAGCTGAGCACAGGTGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: RCAISTDDLQGA*RRGMELSTGAF Trigger: AAAGGCACCTGTGCTCAGCTCCATCCCCCGCCTCAAGGCACCTTGCAAGTCGTCCGTGGAGATGGCACATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000021816.12 |
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| CDS CAA 90 bp | TGTGCCGTCCTGTCAGCACGCCGCCGCTCATTTTTCTGCACACACTaGAGGAGGCAGCAGGTGAGGAAGGCCATGGACATGAGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: CAVLSARRRSFFCTH*RRQQVRKAMDMSRM Trigger: CATCCTGCTCATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCGGCGTGCTGACAGGACGGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000135784.2 |
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| CDS CAA 90 bp | CCACTGTACCTGTCAGCACGCCGCCGCTCATTTTTCTGCACACACTaGAGGAGGCAGCAGGTGAGGAAGGCCATGGACATGAGCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PLYLSARRRSFFCTH*RRQQVRKAMDMSRM Trigger: CATCCTGCTCATGTCCATGGCCTTCCTCACCTGCTGCCTCCTCAAGTGTGTGCAGAAAAATGAGCGGCGGCGTGCTGACAGGTACAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| CDS TCA 72 bp | CTCATGCGGTGGCACAGCTTTGCACACAGGGCTTCCTaGAGACCAGTCAACGGTGCTCCCATTCCAGGCACA | + |
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Preference number: 6 (lower is better) Translates to: LMRWHSFAHRAS*RPVNGAPIPGT Trigger: TGTGCCTGGAATGGGAGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGCATGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS GCA 72 bp | GAGGCGATCACTGCCACCTTAAAGCCGAAGGTCTCATaGGGTGGCACAGCTTTGCACACAGGGCTTCCTGAA | + |
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Preference number: 6 (lower is better) Translates to: EAITATLKPKVS*GGTALHTGLPE Trigger: TTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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| CDS GCA 72 bp | CAGGATGATGGCACAGCTCACAATGGAGGCGATCACTaGCACCTTAAAGCCGAAGGTCTCATGCGGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: QDDGTAHNGGDH*HLKAEGLMRWH Trigger: GTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGATCGCCTCCATTGTGAGCTGTGCCATCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 ENSMUST00000135784.2 |
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| CDS CCA 72 bp | CCCATCCTGAAAGTCCAAGGGTCTTTGTCCACACTGTaGGTCACACCAGCCTGCTCTCTGATGTCACCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PILKVQGSLSTL*VTPACSLMSPG Trigger: CCCTGGTGACATCAGAGAGCAGGCTGGTGTGACCCACAGTGTGGACAAAGACCCTTGGACTTTCAGGATGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 |
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| CDS CCA 72 bp | GATGTGATGAGCAACCTCACAGCCAGGCACAGCTTCTaGAAGGACATGAGGCCACTGTACCTGTCAGCACGC | + |
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Preference number: 6 (lower is better) Translates to: DVMSNLTARHSF*KDMRPLYLSAR Trigger: GCGTGCTGACAGGTACAGTGGCCTCATGTCCTTCCAGAAGCTGTGCCTGGCTGTGAGGTTGCTCATCACATC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119721.2 |
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| CDS CAA 72 bp | ATTGTGGTTGTGTCCCTTGAGGCCCAAGTAGGCAGCTaGTACCGTCTCCAGGTCCTCGCCTCTCAGCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: IVVVSLEAQVGS*YRLQVLASQLV Trigger: TACCAGCTGAGAGGCGAGGACCTGGAGACGGTACAAGCTGCCTACTTGGGCCTCAAGGGACACAACCACAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000135784.2 |
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| CDS CAA 72 bp | ACCTTAAAGCCGAAGGTCTCATGCGGTGGCACAGCTTaGGACTCTAGGGCCAGGCAGGTGACCTTGGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: TLKPKVSCGGTA*DSRARQVTLES Trigger: ACTCTCCAAGGTCACCTGCCTGGCCCTAGAGTCCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135784.2 |
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| CDS CAA 90 bp | ATCACTGCCACCTTAAAGCCGAAGGTCTCATGCGGTGGCACAGCTTaGCACACAGGGCTTCCTGAAGACCAGTCAACGGTGCTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: ITATLKPKVSCGGTA*HTGLPEDQSTVLPF Trigger: GAATGGGAGCACCGTTGACTGGTCTTCAGGAAGCCCTGTGTGCAAAGCTGTGCCACCGCATGAGACCTTCGGCTTTAAGGTGGCAGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021816.12 ENSMUST00000058196.13 ENSMUST00000119721.2 |
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