Pregenerated sensors for SUSD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000006342Ensembl transcript IDs: ENSMUST00000077610.6, ENSMUST00000095541.11
Found 198 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATaGGAGCTTCCAACGCAGGGCTTGGGACATAGGTACTCCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: HQVSVYQALGSEELK*ELPTQGLGHRYSSS Trigger: AGAACTGGAGTACCTATGTCCCAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGGACTGGAGCACGTGGCCCGATaGTGTCAGCCAAGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: TVLFLTAQAPGPLFIVGLEHVAR*CQPSVL Trigger: GAGCACACTTGGCTGACAGCATCGGGCCACGTGCTC...CAGTCCCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR TCA 90 bp | CTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGGTGGGGAGTGAGGAACTaGAATGGGAGCTTCCAACGC | + |
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Preference number: 2 (lower is better) Translates to: LDSSLSHCSGSGATLHCGWGVRN*NGSFQR Trigger: GCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCA...CCCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR CAA 90 bp | GCTCTGGGGAGTGAGGAACTGAAATGGGAGCTTCCAACGCAGGGCTaGGGACATAGGTACTCCAGTTCTAGGACGGGACAAGAAGGCCAT | + |
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Preference number: 2 (lower is better) Translates to: ALGSEELKWELPTQG*GHRYSSSRTGQEGH Trigger: ATGGCCTTCTTGTCCCGTCCTAGAACTGGAGTACCTATGTCCCAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR TCA 90 bp | GGCAGGCACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATGGGGAAGTGCAGGTTACTaGTGGAGAAGTGTTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GRHQVSVYQALGSEELKWGSAGY*WRSVGG Trigger: ACCCCCAACACTTCTCCATCAGTAACCTGCACTTCC...CCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTGCCTGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR CCA 90 bp | AGTGTTGGGGGTGGGGTTCTGGAGTTAAGACTATCCGGTATCATGTCTCAGTCATTCTCCCGGGGAGACTaGGTCTTGGTGAGCACGTGG | + |
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Preference number: 2 (lower is better) Translates to: SVGGGVLELRLSGIMSQSFSRGD*VLVSTW Trigger: CCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA...TGACTGAGACATGATACCGGATAGTCTTAACTCCAGAACCCCACCCCCAACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR GCA 90 bp | TCCGGTATCATGTCTCAGTCAGAAGGACAGGCTAGGACAGGTATTGGGTCCATAAGGGTACATGTTCTTTaGGCTTCTCCCGGGGAGACT | + |
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Preference number: 2 (lower is better) Translates to: SGIMSQSEGQARTGIGSIRVHVL*ASPGET Trigger: AGTCTCCCCGGGAGAAGCGCAAAGAACATGTACCCT...TATGGACCCAATACCTGTCCTAGCCTGTCCTTCTGACTGAGACATGATACCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR GCA 90 bp | AGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCAATAGACAAAGGAAGTaGAGGTTACTGATGGAGAAG | + |
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Preference number: 2 (lower is better) Translates to: RGLFSAGQFSFSLLRLRGNRQRK*RLLMEK Trigger: CTTCTCCATCAGTAACCTGCACTTCCTTTGTCTATT...GCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGGGAGTGAGGAACTGAAATGGGAGCTTCCAACGCAGGGCTTGGGACATAGGCGGGGAGACTGGGTCTaGGTGAGCACGTGGCCCGAT | + |
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Preference number: 3 (lower is better) Translates to: LGSEELKWELPTQGLGHRRGDWV*VSTWPD Trigger: ATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCG...CCTATGTCCCAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR TCA 72 bp | CAGGCACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTaGGGAACTGAAATGGGAGCTTCCAACGCAGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: QAPGLSLSGSGE*GTEMGASNAGL Trigger: AAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR GCA 72 bp | GAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTaGTCAGGCTCCGGGGCCACTCTTCATTGTGGGACT | + |
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Preference number: 3 (lower is better) Translates to: EVSSLLDSSLSH*SGSGATLHCGT Trigger: AGTCCCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR CCA 72 bp | TCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATaGGAGCTTCCAACGCAGGGCTTGGGACATAGGTAC | + |
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Preference number: 3 (lower is better) Translates to: SVYQALGSEELK*ELPTQGLGHRY Trigger: GTACCTATGTCCCAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR-3UTR CAA 90 bp | CCTGGGGTACAAAAGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTACTGATGGAGAAGTGTaGGGGGTGGGGTTCTGGAGT | + |
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Preference number: 3 (lower is better) Translates to: PGVQKRSLLCWTVLFLTATDGEV*GVGFWS Trigger: ACTCCAGAACCCCACCCCCAACACTTCTCCATCAGT...AGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCTTTTGTACCCCAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| 3UTR CCA 72 bp | CCTGAGTATGCTAGAGAAGAGGTAAGAGTAGAAGCCTaGGGTACAAAAGAGGTCTCTTCTCTGCTGGACAGT | + |
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Preference number: 3 (lower is better) Translates to: PEYAREEVRVEA*GTKEVSSLLDS Trigger: ACTGTCCAGCAGAGAAGAGACCTCTTTTGTACCCCAGGCTTCTACTCTTACCTCTTCTCTAGCATACTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGTGGCCTGGGCCAGGGTaGAGGGGCAGTCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: ALLPGRLGLGEHVARCCQWPGPG*RGSLAA Trigger: AGCTGCCAGACTGCCCCTGCACCCTGGCCCAGGCCA...CTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTCCAGGCCAGGCACTGTaGTCGGGCCCAGGCTACGGA | + |
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Preference number: 4 (lower is better) Translates to: LPGRLGLGEHVARCCQPSPGQAL*SGPGYG Trigger: TCCGTAGCCTGGGCCCGAGCACAGTGCCTGGCCTGG...ACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAATGGCCTGGGCCAGGGTaGAGGGGCAGTCTGGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQWPGPG*RGSLAA Trigger: AGCTGCCAGACTGCCCCTGCACCCTGGCCCAGGCCA...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | CGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCCTGCAGTCAGCCCTGTaGCACGGGCCTGGGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: RGDWVLVSTWPDAVSQVCLQSAL*HGPGCH Trigger: ATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAG...GCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGGTGCACCCCAGTCGTaGCCACGGTCAGGGGTGCTG | + |
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Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQGAPQS*PRSGVL Trigger: CAGCACCCCTGACCGTGGCCACGACTGGGGTGCACC...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGGCAGAGGCCAGGCGTaGGGGTCTGTAGTTGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRLGLGEHVARCCQPSGRGQA*GSVVAA Trigger: TGCCGCAACTACAGACCCCCACGCCTGGCCTCTGCC...ACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCGGTGCTGGTGCAGTTaGTGGGCAATCCGGGTGGCG | + |
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Preference number: 4 (lower is better) Translates to: PGRLGLGEHVARCCQPSVRCWCS*WAIRVA Trigger: CGCCACCCGGATTGCCCACCAACTGCACCAGCACCG...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCAGGTGCCAGGCCAGTaGGTGATCGTTGGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: ALLPGRLGLGEHVARCCQQVPGQ*VIVGPE Trigger: CTCTGGACCAACGATCACGCACTGGCCTGGCACCTG...CTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTGTCTGGCTGGGGCTaGGTGTGGTCTCATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PGRLGLGEHVARCCQPSVLSGWG*VWSHQG Trigger: TCCCTGATGAGACCACACTCAGCCCCAGCCAGACAG...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCACGGTCAGGGGTGCTaGCACTTGTCGAGTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALLPGRLGLGEHVARCCQHGQGC*HLSSLK Trigger: CTTCAGACTCGACAAGTGGCAGCACCCCTGACCGTG...CTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTCTGCAGTCAGCCCTGTaGCACGGGCCTGGGTGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GDWVLVSTWPDAVSQVCSLQSAL*HGPGCH Trigger: ATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAG...AGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | CTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCATTCTTGGACGGCCACTaGAGTCAGCCCTGTGCCACG | + |
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Preference number: 4 (lower is better) Translates to: LLPGRLGLGEHVARCCQPFLDGH*SQPCAT Trigger: CGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAA...TGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | CTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAGCCCATTGCGCAGGGTaGAGTCATCCCTGGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: LLPGRLGLGEHVARCCQPAHCAG*SHPWGY Trigger: ATAACCCCAGGGATGACTTCACCCTGCGCAATGGGC...TGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAACTGTCTGGCTGGGGCTaGGTGTGGTCTCATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQLSGWG*VWSHQG Trigger: TCCCTGATGAGACCACACTCAGCCCCAGCCAGACAG...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | TTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGGTGCCAGGCCAGTaGGTGATCGTTGGTCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: FALLPGRLGLGEHVARCCQVPGQ*VIVGPE Trigger: CTCTGGACCAACGATCACGCACTGGCCTGGCACCTG...ACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | CTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAGAGCTGTGTCCCTGCTaGCGTGTAGCAGCATTGCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPGRLGLGEHVARCCQPELCPC*RVAALL Trigger: CAGCAATGCTGCTACACGGCAGCAGGGACACAGCTC...TGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCGGTGCAGGGGCAGTCTaGCAGCTCCGTCAGGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: FFALLPGRLGLGEHVARCGAGAV*QLRQEV Trigger: AACTTCCTGACGGAGCTGCCAGACTGCCCCTGCACC...GCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGCCCATTGCGCAGGGTaGAGTCATCCCTGGGGTTAT | + |
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Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQAHCAG*SHPWGY Trigger: ATAACCCCAGGGATGACTTCACCCTGCGCAATGGGC...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | TTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCCACGGTCAGGGGTGCTaGCACTTGTCGAGTCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: FFALLPGRLGLGEHVARCHGQGC*HLSSLK Trigger: CTTCAGACTCGACAAGTGGCAGCACCCCTGACCGTG...GCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCACCCTGGCTGACACTCTaGGGTAGGCATAGACCACTT | + |
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Preference number: 4 (lower is better) Translates to: LLPGRLGLGEHVARCCQPPWLTL*GRHRPL Trigger: AAGTGGTCTATGCCTACCCCAGAGTGTCAGCCAGGG...TGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | TGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGGACGGCGTGGGCAGCGCTaGAGTGTCCCAGGTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: WTVLFLTAQAPGPLFIVGRRGQR*SVPGEV Trigger: AACCTCACCTGGGACACTTCAGCGCTGCCCACGCCG...TCCCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | GCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCACAACCATAGTCAGTaGAGAAGCGGCCAGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: ALLPGRLGLGEHVARCCQHNHSQ*RSGQNQ Trigger: CTGATTCTGGCCGCTTCTTCACTGACTATGGTTGTG...CTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | GACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTGGTGCCACTTGTCGAGTCTaGAGTCAGGAGCTGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: DWVLVSTWPDAVSQVCSGATCRV*SQELCP Trigger: GGGACACAGCTCCTGACTTCAGACTCGACAAGTGGC...ACCAGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | GGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTAACTGGAACACCTGCTaGGCACTGGCATTCAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GDWVLVSTWPDAVSQVCSNWNTC*ALAFRG Trigger: GCCCCTGAATGCCAGTGCTCAGCAGGTGTTCCAGTT...AGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTGGTCACTTTGTAGGGATGTaGTGCTGTGAACCCGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: DWVLVSTWPDAVSQVCSGHFVGM*CCEPGA Trigger: GGCCCCGGGTTCACAGCAGCACATCCCTACAAAGTG...ACCAGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077610.6 |
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| CDS-3UTR GCA 90 bp | CTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTTCCACATGGTCATGTTaGTCTTCCTGCGGCGATGCA | + |
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Preference number: 4 (lower is better) Translates to: LPGRLGLGEHVARCCQPSSTWSC*SSCGDA Trigger: TGCATCGCCGCAGGAAGAGCAACATGACCATGTGGA...ACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGGTCTCGTTCACCAGCTaGCTCTTCTCGGATTCAGAC | + |
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Preference number: 4 (lower is better) Translates to: PGRLGLGEHVARCCQPSVVSFTS*LFSDSD Trigger: GTCTGAATCCGAGAAGAGCCAGCTGGTGAACGAGAC...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | TTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCAGGAGACCACGGGTGTaGGTCAGAAACTTCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: FFALLPGRLGLGEHVARCRRPRV*VRNFSG Trigger: GCCTGAGAAGTTTCTGACCCACACCCGTGGTCTCCT...GCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | GACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTGGTACACCTGCTGAGCACTaGCATTCAGGGGCAGGACCT | + |
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Preference number: 4 (lower is better) Translates to: DWVLVSTWPDAVSQVCSGTPAEH*HSGAGP Trigger: AGGTCCTGCCCCTGAATGCCAGTGCTCAGCAGGTGT...ACCAGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCGCTGTGAGCTCCACATaGTCATGTTGCTCTTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RGDWVLVSTWPDAVSQVCAVSST*SCCSSC Trigger: GCAGGAAGAGCAACATGACCATGTGGAGCTCACAGC...GCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTCCCCTGGGTGGTAGGTaGATACGCTGCCATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GDWVLVSTWPDAVSQVCSPLGGR*IRCHVQ Trigger: TTGAACATGGCAGCGTATGCACCTACCACCCAGGGG...AGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGATGATAGAGATCAGTaGCACTATGGCCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQDDRDQ*HYGQAS Trigger: GGAGGCCTGGCCATAGTGGCACTGATCTCTATCATC...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | TTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTGTCTCGTTCACCAGCTaGCTCTTCTCGGATTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FALLPGRLGLGEHVARCCVSFTS*LFSDSD Trigger: GTCTGAATCCGAGAAGAGCCAGCTGGTGAACGAGAC...ACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | CAAAGGAAGTGCAGGTTACTGATGGAGAAGTGTTGGGGGTGGGGTTCTGGAGTTGGCATTCTCCCAGGCTaGGCCCGGCCCTGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QRKCRLLMEKCWGWGSGVGILPG*ARPCTL Trigger: GAGAGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCC...AACTCCAGAACCCCACCCCCAACACTTCTCCATCAGTAACCTGCACTTCCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | GCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGGAGCTGTGTCCCTGCTaGCGTGTAGCAGCATTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGQFSFSLLRLRGHSSLWELCPC*RVAALL Trigger: CAGCAATGCTGCTACACGGCAGCAGGGACACAGCTC...CCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | CGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTCAGGCAACAGAATaGTCACACTCAGGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RGDWVLVSTWPDAVSQVCSQATE*SHSGKD Trigger: GTCCTTTCCTGAGTGTGAGCATTCTGTTGCCTGAGA...GCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGTTGAAGTTGGGGTTGTaGTTGGGTCCGTACACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGRLGLGEHVARCCQPSVLKLGL*LGPYTN Trigger: ATTCGTGTACGGACCCAAGCACAACCCCAACTTCAA...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGTCATCACATCAAGGATaGAGAAACGGTCACCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGRLGLGEHVARCCQPSVSSHQG*RNGHPH Trigger: GTGAGGGTGACCGTTTCTGCATCCTTGATGTGATGA...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTGGTCACATCCTTCTCTCCTaGGTAGTTCCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DWVLVSTWPDAVSQVCSGHILLS*VVPAAA Trigger: AGCAGCAGCAGGAACTACCCAGGAGAGAAGGATGTG...ACCAGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTCACATCCTTCTCTCCTaGGTAGTTCCTGCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GDWVLVSTWPDAVSQVCSHILLS*VVPAAA Trigger: AGCAGCAGCAGGAACTACCCAGGAGAGAAGGATGTG...AGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGACAGTGCACAGCCCCTaGGTGGTAGGTGCATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: AGQFSFSLLRLRGHSSLWTVHSP*VVGAYA Trigger: AGCGTATGCACCTACCACCCAGGGGCTGTGCACTGT...CCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | CCTGGGGTACAAAAGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTTGCCAGGCCAGTGCGTaGTCGTTGGTCCAGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGVQKRSLLCWTVLFLTACQASA*SLVQSA Trigger: GGCGCTCTGGACCAACGATCACGCACTGGCCTGGCA...AGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCTTTTGTACCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATGGCAGGAGCTGTGTCCCTaGTGCCGTGTAGCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GRHQVSVYQALGSEELKWQELCP*CRVAAL Trigger: CAATGCTGCTACACGGCAGCAGGGACACAGCTCCTG...CCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTGCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | TTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAATCATGTTGCTCTTCCTaGGGCGATGCAGCATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: FSRGDWVLVSTWPDAVSQSCCSS*GDAASY Trigger: ATATGATGCTGCATCGCCGCAGGAAGAGCAACATGA...TTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | AGTGTTGGGGGTGGGGTTCTGGAGTTAAGACTATCCGGTATCATGTCTCAGTCAGGCAGAGGCCAGGCGTaGGGGTCTGTAGTTGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVGGGVLELRLSGIMSQSGRGQA*GSVVAA Trigger: TGCCGCAACTACAGACCCCCACGCCTGGCCTCTGCC...TGACTGAGACATGATACCGGATAGTCTTAACTCCAGAACCCCACCCCCAACACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | ACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGGACTGGCCACATCTTCTGTCTaGCTGGGGCTGAGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVLFLTAQAPGPLFIVGLATSSV*LGLSVV Trigger: GACCACACTCAGCCCCAGCCAGACAGAAGATGTGGC...CAGTCCCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | GGGTACATGTTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGCACAACCATAGTCAGTaGAGAAGCGGCCAGAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYMFFALLPGRLGLGEHVHNHSQ*RSGQNQ Trigger: CTGATTCTGGCCGCTTCTTCACTGACTATGGTTGTG...CACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAACATGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | AAGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCCCTGGGTGGTAGGTaGATACGCTGCCATGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRSLLCWTVLFLTAQAPGPLGGR*IRCHVQ Trigger: TTGAACATGGCAGCGTATGCACCTACCACCCAGGGG...CCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | GGGTACATGTTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGCCACTGACAGGAACATaGCCTTCAGGTCCATCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: GYMFFALLPGRLGLGEHVPLTGT*PSGPSN Trigger: ATTGGATGGACCTGAAGGGCATGTTCCTGTCAGTGG...CACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAACATGTACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | AGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCAATCTTCACAACAGGTaGCAAGGCCCGAGCAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLFSAGQFSFSLLRLRGNLHNR*QGPSRL Trigger: CAACCTGCTCGGGCCTTGGCACCTGTTGTGAAGATT...GCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGTTCCATGGGGCAGGAATCAAGGCAGTTTAGCTCTGGGGGACCTCACAACACCTGCTGAGCACTaGCATTCAGGGGCAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: QVVPWGRNQGSLALGDLTTPAEH*HSGAGP Trigger: AGGTCCTGCCCCTGAATGCCAGTGCTCAGCAGGTGT...TGTGAGGTCCCCCAGAGCTAAACTGCCTTGATTCCTGCCCCATGGAACAACTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | TTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTAAACTGAGCACTTTCTaGTTCAGCAACACTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FALLPGRLGLGEHVARCCKLSTF*FSNTSK Trigger: CTTGGAAGTGTTGCTGAATCAGAAAGTGCTCAGTTT...ACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | GGGTACATGTTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGTCTCAGGCAACAGAATaGTCACACTCAGGAAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GYMFFALLPGRLGLGEHVSQATE*SHSGKD Trigger: GTCCTTTCCTGAGTGTGAGCATTCTGTTGCCTGAGA...CACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAACATGTACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | AAGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGTCCACATGGTCATGTTaGTCTTCCTGCGGCGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: KRSLLCWTVLFLTAQAPGSTWSC*SSCGDA Trigger: TGCATCGCCGCAGGAAGAGCAACATGACCATGTGGA...CCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATGGGAGCTTAGTTGCGGCAGTCACTaGAGGGCCGGCGCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: HQVSVYQALGSEELKWELSCGSH*RAGASY Trigger: ATATGAAGCGCCGGCCCTCCAGTGACTGCCGCAACT...AAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | GTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTAGGCATTCTCCCAGGCTaGGCCCGGCCCTGCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHSVQGTDTRCGIHRTRVGILPG*ARPCTL Trigger: GAGAGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCC...TACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | AGTGTTGGGGGTGGGGTTCTGGAGTTAAGACTATCCGGTATCATGTCTCAGTCAAGGGAACAGCTTCCCTaGGCACCTGCTGTGAACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SVGGGVLELRLSGIMSQSREQLP*APAVNP Trigger: CGGGTTCACAGCAGGTGCCCAGGGAAGCTGTTCCCT...TGACTGAGACATGATACCGGATAGTCTTAACTCCAGAACCCCACCCCCAACACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | ACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCCAGGCCAGGCACTGTaGTCGGGCCCAGGCTACGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDTRCGIHRTRVHVLCASPGQAL*SGPGYG Trigger: TCCGTAGCCTGGGCCCGAGCACAGTGCCTGGCCTGG...AGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GCTGGACAGTTCTCTTTCTCACTGCTCAGGCTCCGGGGCCACTCTTCATTGTGGTCATCACATCAAGGATaGAGAAACGGTCACCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AGQFSFSLLRLRGHSSLWSSHQG*RNGHPH Trigger: GTGAGGGTGACCGTTTCTGCATCCTTGATGTGATGA...CCACAATGAAGAGTGGCCCCGGAGCCTGAGCAGTGAGAAAGAGAACTGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCCGGTGCTGGTGCAGTTaGTGGGCAATCCGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VFKAQILDVAFIGLGYMFRCWCS*WAIRVA Trigger: CGCCACCCGGATTGCCCACCAACTGCACCAGCACCG...GAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTCGGCGTGGGCAGCGCTaGAGTGTCCCAGGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLRRGQR*SVPGEV Trigger: AACCTCACCTGGGACACTTCAGCGCTGCCCACGCCG...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | CACCAGGTCTCAGTTTATCAGGCTCTGGGGAGTGAGGAACTGAAATGGGAGCTTCAGGGAAGAGTGGTTTaGAGTTGGGGTTGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQVSVYQALGSEELKWELQGRVV*SWGCAW Trigger: CCAAGCACAACCCCAACTTCAAACCACTCTTCCCTG...AAGCTCCCATTTCAGTTCCTCACTCCCCAGAGCCTGATAAACTGAGACCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | TCCGGTATCATGTCTCAGTCAGAAGGACAGGCTAGGACAGGTATTGGGTCCATACCAGGCCTCCGAAGATaGTACTCAGTAGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGIMSQSEGQARTGIGSIPGLRR*YSVAPC Trigger: ACACGGTGCTACTGAGTATCATCTTCGGAGGCCTGG...TATGGACCCAATACCTGTCCTAGCCTGTCCTTCTGACTGAGACATGATACCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCGTGGGGGTCTGTAGTTaGGGCAGTCACTGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLVGVCS*GSHWRA Trigger: GGCCCTCCAGTGACTGCCGCAACTACAGACCCCCAC...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | TTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGGTGCACCCCAGTCGTaGCCACGGTCAGGGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKAQILDVAFIGLGYMFFGAPQS*PRSGVL Trigger: CAGCACCCCTGACCGTGGCCACGACTGGGGTGCACC...AAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | TTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTTGCCAGGCCAGTGCGTaGTCGTTGGTCCAGAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: FKAQILDVAFIGLGYMFFCQASA*SLVQSA Trigger: GGCGCTCTGGACCAACGATCACGCACTGGCCTGGCA...AAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTGTGGGGGTCTGTAGTTaGGGCAGTCACTGGAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLVGVCS*GSHWRA Trigger: GGCCCTCCAGTGACTGCCGCAACTACAGACCCCCAC...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCGGTGCAGGGGCAGTCTaGCAGCTCCGTCAGGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLGAGAV*QLRQEV Trigger: AACTTCCTGACGGAGCTGCCAGACTGCCCCTGCACC...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GAGGTAAGAGTAGAAGCCTGGGGTACAAAAGAGGTCTCTTCTCTGCTGGACAGTGCTGTGAGCTCCACATaGTCATGTTGCTCTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EVRVEAWGTKEVSSLLDSAVSST*SCCSSC Trigger: GCAGGAAGAGCAACATGACCATGTGGAGCTCACAGC...ACTGTCCAGCAGAGAAGAGACCTCTTTTGTACCCCAGGCTTCTACTCTTACCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTAGGGATGTGCTGCTGTaGACCCGGGGCCTGGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLRDVLL*TRGLVL Trigger: CAATACCAGGCCCCGGGTTCACAGCAGCACATCCCT...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000077610.6 |
||
| CDS-3UTR TCA 90 bp | GTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCAACTGGAACACCTGCTaGGCACTGGCATTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAQILDVAFIGLGYMFNWNTC*ALAFRG Trigger: GCCCCTGAATGCCAGTGCTCAGCAGGTGTTCCAGTT...GAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTCCAGTGCGTGATCGTTaGTCCAGAGCGCCCGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLPVRDR*SRAPAH Trigger: ATGTGCGGGCGCTCTGGACCAACGATCACGCACTGG...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTAACAGTGCACAGCCCCTaGGTGGTAGGTGCATACGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHSVQGTDTRCGIHRTRVTVHSP*VVGAYA Trigger: AGCGTATGCACCTACCACCCAGGGGCTGTGCACTGT...TACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCAGTTGCGGCAGTCACTaGAGGGCCGGCGCTTCATAT | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLSCGSH*RAGASY Trigger: ATATGAAGCGCCGGCCCTCCAGTGACTGCCGCAACT...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | GTACAAAAGAGGTCTCTTCTCTGCTGGACAGTTCTCTTTCTCACTGCTCAGGCTGGGGCCTGGTATTGTTaGGAGCAGCATCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VQKRSLLCWTVLFLTAQAGAWYC*EQHQNP Trigger: TGGATTTTGATGCTGCTCTCAACAATACCAGGCCCC...AGCCTGAGCAGTGAGAAAGAGAACTGTCCAGCAGAGAAGAGACCTCTTTTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | ACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTGCCACTTGTCGAGTCTaGAGTCAGGAGCTGTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TDTRCGIHRTRVHVLCASATCRV*SQELCP Trigger: GGGACACAGCTCCTGACTTCAGACTCGACAAGTGGC...AGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | GTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACCAGGCCTCCGAAGATaGTACTCAGTAGCACCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VHSVQGTDTRCGIHRTRVPGLRR*YSVAPC Trigger: ACACGGTGCTACTGAGTATCATCTTCGGAGGCCTGG...TACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTCAGGAGCTGTGTCCCTaGTGCCGTGTAGCAGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLQELCP*CRVAAL Trigger: CAATGCTGCTACACGGCAGCAGGGACACAGCTCCTG...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | GTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTAAGGAGACCACGGGTGTaGGTCAGAAACTTCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VHSVQGTDTRCGIHRTRVRRPRV*VRNFSG Trigger: GCCTGAGAAGTTTCTGACCCACACCCGTGGTCTCCT...TACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | AGTGTTGGGGGTGGGGTTCTGGAGTTAAGACTATCCGGTATCATGTCTCAGTCACTCATCAGGGAAGAGTaGTTTGAAGTTGGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGGGVLELRLSGIMSQSLIREE*FEVGVV Trigger: CACAACCCCAACTTCAAACCACTCTTCCCTGATGAG...TGACTGAGACATGATACCGGATAGTCTTAACTCCAGAACCCCACCCCCAACACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTGCCACATCTTCTGTCTaGCTGGGGCTGAGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLATSSV*LGLSVV Trigger: GACCACACTCAGCCCCAGCCAGACAGAAGATGTGGC...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCCCCTGGCTGACACTCTaGGGTAGGCATAGACCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLPWLTL*GRHRPL Trigger: AAGTGGTCTATGCCTACCCCAGAGTGTCAGCCAGGG...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR TCA 90 bp | GTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCCAGGGAAGAGTGGTTTaGAGTTGGGGTTGTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VFKAQILDVAFIGLGYMFQGRVV*SWGCAW Trigger: CCAAGCACAACCCCAACTTCAAACCACTCTTCCCTG...GAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR GCA 90 bp | TATTGGGTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTGATGATAGAGATCAGTaGCACTATGGCCAGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: YWVHSVQGTDTRCGIHRTDDRDQ*HYGQAS Trigger: GGAGGCCTGGCCATAGTGGCACTGATCTCTATCATC...AGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGACCCAATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | TATCCGGTATCATGTCTCAGTCAGAAGGACAGGCTAGGACAGGTATTGGGTCCAGTCCACTTTAAATGTTaGACCACGAAGTCTTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPVSCLSQKDRLGQVLGPVHFKC*TTKSLP Trigger: TGGCAAAGACTTCGTGGTGCAACATTTAAAGTGGAC...TGGACCCAATACCTGTCCTAGCCTGTCCTTCTGACTGAGACATGATACCGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | ACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTGGGGCCTGGTATTGTTaGGAGCAGCATCAAAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TDTRCGIHRTRVHVLCASGAWYC*EQHQNP Trigger: TGGATTTTGATGCTGCTCTCAACAATACCAGGCCCC...AGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCTTGAAGTTGGGGTTGTaGTTGGGTCCGTACACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLLKLGL*LGPYTN Trigger: ATTCGTGTACGGACCCAAGCACAACCCCAACTTCAA...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CCA 90 bp | CAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTCCTCATCAGGGAAGAGTaGTTTGAAGTTGGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QILDVAFIGLGYMFFALLLIREE*FEVGVV Trigger: CACAACCCCAACTTCAAACCACTCTTCCCTGATGAG...GAGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR GCA 90 bp | ACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTTGCGCTTCTTCATGTTGCTCTTCCTaGGGCGATGCAGCATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TDTRCGIHRTRVHVLCASSCCSS*GDAASY Trigger: ATATGATGCTGCATCGCCGCAGGAAGAGCAACATGA...AGAAGCGCAAAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR TCA 90 bp | TCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACAAACTGAGCACTTTCTaGTTCAGCAACACTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SIVFKAQILDVAFIGLGYKLSTF*FSNTSK Trigger: CTTGGAAGTGTTGCTGAATCAGAAAGTGCTCAGTTT...GTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | TTGTCTTCTTGGACGGCCACTGCAGTCAGCCCTGTGCCACGGGCCTaGGTGCCATTGGGCATTCTCCCAGGCTGGGCCCGGCCCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LSSWTATAVSPVPRA*VPLGILPGWARPCT Trigger: AGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCCCAATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAAGACAA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | GGCTACGGAGTCTGCCCGGAAGTCGTCACCCAGGTGCCAGGCCAGTaGGTGATCGTTGGTCCAGAGCGCCCGCACATCCTTCTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GYGVCPEVVTQVPGQ*VIVGPERPHILLSW Trigger: CCAGGAGAGAAGGATGTGCGGGCGCTCTGGACCAACGATCACGCACTGGCCTGGCACCTGGGTGACGACTTCCGGGCAGACTCCGTAGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | GGTAGCCAGCCACAGGATACCACAGGCTGCAGGCTCTTCAGACGGTaGTGGTGCAGTTGGTGGGCAATCCGGGTGGCGTTGCCCACGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSQPQDTTGCRLFRR*WCSWWAIRVALPTL Trigger: GAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGTGGCTGGCTACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | GCCAAGGCCCGAGCAGGTTGGGTGACAGGAACAGAGTCCATCCTGTaGCCCGCAGCGCAGGGAACAGCTTCCCTGGGCACCTGCTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: AKARAGWVTGTESIL*PAAQGTASLGTCCE Trigger: TTCACAGCAGGTGCCCAGGGAAGCTGTTCCCTGCGCTGCGGGGCACAGGATGGACTCTGTTCCTGTCACCCAACCTGCTCGGGCCTTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS CCA 90 bp | CTGCCCGGAAGTCGTCACCCAGGTGCCAGGCCAGTGCGTGATCGTTaGTCCAGAGCGCCCGCACATCCTTCTCTCCTGGGTAGTTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LPGSRHPGARPVRDR*SRAPAHPSLLGSSC Trigger: GCAGGAACTACCCAGGAGAGAAGGATGTGCGGGCGCTCTGGACCAACGATCACGCACTGGCCTGGCACCTGGGTGACGACTTCCGGGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | CCTGGGCCAGGGTGCAGGGGCAGTCTGGCAGCTCCGTCAGGAAGTTaGGTAGTTGGTCTTCCAATGCCTCCCAGGCCAGGCACTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: PGPGCRGSLAAPSGS*VVGLPMPPRPGTVL Trigger: GAGCACAGTGCCTGGCCTGGGAGGCATTGGAAGACCAACTACCCAACTTCCTGACGGAGCTGCCAGACTGCCCCTGCACCCTGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | AGCCAGCCACAGGATACCACAGGCTGCAGGCTCTTCAGACGGTGCTaGTGCAGTTGGTGGGCAATCCGGGTGGCGTTGCCCACGCTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQPQDTTGCRLFRRC*CSWWAIRVALPTLE Trigger: CTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGTGGCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CAA 90 bp | CGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCGGCAGGACCTGCCCATaGCGCAGGGTGAAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: RGDWVLVSTWPDAVSQVCGRTCP*RRVKSS Trigger: GGATGACTTCACCCTGCGCAATGGGCAGGTCCTGCC...GCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | TCACATCCGAATTGTCTTCTTGGACGGCCACTGCAGTCAGCCCTGTaGCACGGGCCTGGGTGCCATTGGGCATTCTCCCAGGCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SHPNCLLGRPLQSAL*HGPGCHWAFSQAGP Trigger: GGGCCCAGCCTGGGAGAATGCCCAATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAAGACAATTCGGATGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | TGCCCGTTTGCAGGTGGGGGTAGCCAGCCACAGGATACCACAGGCTaGAGGCTCTTCAGACGGTGCTGGTGCAGTTGGTGGGCAATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CPFAGGGSQPQDTTG*RLFRRCWCSWWAIR Trigger: CCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGTGGCTGGCTACCCCCACCTGCAAACGGGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | CGAAGGCAGAGGCCAGGCGTGGGGGTCTGTAGTTGCGGCAGTCACTaGAGGGCCGGCGCTTCATATAACGGGGACACTCAGGAGCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: RRQRPGVGVCSCGSH*RAGASYNGDTQEPK Trigger: TTTGGGCTCCTGAGTGTCCCCGTTATATGAAGCGCCGGCCCTCCAGTGACTGCCGCAACTACAGACCCCCACGCCTGGCCTCTGCCTTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | GATACCACAGGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTTGGTaGGCAATCCGGGTGGCGTTGCCCACGCTCGAGCTTCCTGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DTTGCRLFRRCWCSW*AIRVALPTLELPVL Trigger: GAGCACAGGAAGCTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | CAGGATACCACAGGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTTaGTGGGCAATCCGGGTGGCGTTGCCCACGCTCGAGCTTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: QDTTGCRLFRRCWCS*WAIRVALPTLELPV Trigger: CACAGGAAGCTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | GAACAGAGTCCATCCTGTGCCCCGCAGCGCAGGGAACAGCTTCCCTaGGCACCTGCTGTGAACCCGGGGCCTGGTATTGTTGAGAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EQSPSCAPQRREQLP*APAVNPGPGIVESS Trigger: GCTGCTCTCAACAATACCAGGCCCCGGGTTCACAGCAGGTGCCCAGGGAAGCTGTTCCCTGCGCTGCGGGGCACAGGATGGACTCTGTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS TCA 90 bp | ACCCCAGTCGTGGCCACGGTCAGGGGTGCTGCCACTTGTCGAGTCTaGAGTCAGGAGCTGTGTCCCTGCTGCCGTGTAGCAGCATTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TPVVATVRGAATCRV*SQELCPCCRVAALL Trigger: CAGCAATGCTGCTACACGGCAGCAGGGACACAGCTCCTGACTTCAGACTCGACAAGTGGCAGCACCCCTGACCGTGGCCACGACTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 90 bp | CGGGCCTGGGTGCCATTGGGCATTCTCCCAGGCTGGGCCCGGCCCTaGACTCTCAGATCACTCAGGGTGGTCTCCAATAGCACATATTCG | + |
|
Preference number: 5 (lower is better) Translates to: RAWVPLGILPGWARP*TLRSLRVVSNSTYS Trigger: CGAATATGTGCTATTGGAGACCACCCTGAGTGATCTGAGAGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCCCAATGGCACCCAGGCCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 90 bp | GACCCGCCAGCTAACCGCACCTCTATCACATCCGAATTGTCTTCTTaGACGGCCACTGCAGTCAGCCCTGTGCCACGGGCCTGGGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: DPPANRTSITSELSS*TATAVSPVPRAWVP Trigger: TGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAAGACAATTCGGATGTGATAGAGGTGCGGTTAGCTGGCGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 90 bp | GACGTGTTGGAAACAGCCCAGTCGGCTCCAAACTGGAACACCTGCTaGGCACTGGCATTCAGGGGCAGGACCTGCCCATTGCGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: DVLETAQSAPNWNTC*ALAFRGRTCPLRRV Trigger: CACCCTGCGCAATGGGCAGGTCCTGCCCCTGAATGCCAGTGCTCAGCAGGTGTTCCAGTTTGGAGCCGACTGGGCTGTTTCCAACACGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CAA 90 bp | GCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCGGGGCCTGGTATTGTaGAGAGCAGCATCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLPGRLGLGEHVARCCQRGLVL*RAASKS Trigger: GGATTTTGATGCTGCTCTCAACAATACCAGGCCCCG...CTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CAA 90 bp | CTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTTCCCTGGGGTTATTGTaGAGTGTCCCCAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: LPGRLGLGEHVARCCQPSSLGLL*SVPRRP Trigger: TGGTCTCCTGGGGACACTCAACAATAACCCCAGGGA...ACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 90 bp | TCCAGAAAATCTTCACAACAGGTGCCAAGGCCCGAGCAGGTTGGGTaGCAGGAACAGAGTCCATCCTGTGCCCCGCAGCGCAGGGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: SRKSSQQVPRPEQVG*QEQSPSCAPQRREQ Trigger: CTGTTCCCTGCGCTGCGGGGCACAGGATGGACTCTGTTCCTGTCACCCAACCTGCTCGGGCCTTGGCACCTGTTGTGAAGATTTTCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS CCA 90 bp | GTAGTCCAGAAAATCTTCACAACAGGTGCCAAGGCCCGAGCAGGTTaGGTGACAGGAACAGAGTCCATCCTGTGCCCCGCAGCGCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VVQKIFTTGAKARAG*VTGTESILCPAAQG Trigger: TCCCTGCGCTGCGGGGCACAGGATGGACTCTGTTCCTGTCACCCAACCTGCTCGGGCCTTGGCACCTGTTGTGAAGATTTTCTGGACTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS-3UTR CAA 90 bp | TGTGGGACTGAGCCAACCCGAGCTCTCAAGTTGTTCCATGGGGCAGGAATCAAGGGCAGGACCTGCCCATaGCGCAGGGTGAAGTCATCC | + |
|
Preference number: 5 (lower is better) Translates to: CGTEPTRALKLFHGAGIKGRTCP*RRVKSS Trigger: GGATGACTTCACCCTGCGCAATGGGCAGGTCCTGCC...CTTGATTCCTGCCCCATGGAACAACTTGAGAGCTCGGGTTGGCTCAGTCCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS TCA 90 bp | AGAGCGCCCGCACATCCTTCTCTCCTGGGTAGTTCCTGCTGCTGCTaGTCCTCAGAGCACCCACTTTCCACCTCTGGTACTGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: RAPAHPSLLGSSCCC*SSEHPLSTSGTEVM Trigger: CATCACCTCAGTACCAGAGGTGGAAAGTGGGTGCTCTGAGGATCAGCAGCAGCAGGAACTACCCAGGAGAGAAGGATGTGCGGGCGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 90 bp | GGTAGGTGCATACGCTGCCATGTTCAATGTCACAACCATAGTCAGTaGAGAAGCGGCCAGAATCAGCCCTGGCCTGGGCCAGGGTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRCIRCHVQCHNHSQ*RSGQNQPWPGPGCR Trigger: CCTGCACCCTGGCCCAGGCCAGGGCTGATTCTGGCCGCTTCTTCACTGACTATGGTTGTGACATTGAACATGGCAGCGTATGCACCTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 90 bp | CTGAATCGGACAACGGATCCTTCCAGGTACCTCAAGCCTTCCTTATaGCCGTTTGCAGGTGGGGGTAGCCAGCCACAGGATACCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LNRTTDPSRYLKPSL*PFAGGGSQPQDTTG Trigger: GCCTGTGGTATCCTGTGGCTGGCTACCCCCACCTGCAAACGGGCATAAGGAAGGCTTGAGGTACCTGGAAGGATCCGTTGTCCGATTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS-3UTR CAA 90 bp | GGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTTCATCCCTGGGGTTATaGTTGAGTGTCCCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GDWVLVSTWPDAVSQVCSSSLGL*LSVPRR Trigger: TCTCCTGGGGACACTCAACAATAACCCCAGGGATGA...AGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 90 bp | AAGGACCTTGTACACCGACCTCGAGGCCAGCCCCCGATGACAACATaGTTGACACCTTATCCTGAGCGGCCACTGACAGGAACATGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KDLVHRPRGQPPMTT*LTPYPERPLTGTCP Trigger: AGGGCATGTTCCTGTCAGTGGCCGCTCAGGATAAGGTGTCAATCATGTTGTCATCGGGGGCTGGCCTCGAGGTCGGTGTACAAGGTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 90 bp | CCAGGAGACCACGGGTGTGGGTCAGAAACTTCTCAGGCAACAGAATaGTCACACTCAGGAAAGGACCTTGTACACCGACCTCGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PGDHGCGSETSQATE*SHSGKDLVHRPRGQ Trigger: CTGGCCTCGAGGTCGGTGTACAAGGTCCTTTCCTGAGTGTGAGCATTCTGTTGCCTGAGAAGTTTCTGACCCACACCCGTGGTCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 90 bp | ATACCTGGGGCTGGCTTGCACAGAGCGCACACAGTGCACAGCCCCTaGGTGGTAGGTGCATACGCTGCCATGTTCAATGTCACAACCATA | + |
|
Preference number: 5 (lower is better) Translates to: IPGAGLHRAHTVHSP*VVGAYAAMFNVTTI Trigger: TATGGTTGTGACATTGAACATGGCAGCGTATGCACCTACCACCCAGGGGCTGTGCACTGTGTGCGCTCTGTGCAAGCCAGCCCCAGGTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | TGTGGGACTGAGCCAACCCGAGCTCTCAAGTTGTTCCATGGGGCAGGAATCAAGGTGTCCCAGGTGAGGTaGAGGTTTCCCCTGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGTEPTRALKLFHGAGIKVSQVR*RFPLVS Trigger: AGACACCAGGGGAAACCTCAACCTCACCTGGGACAC...CTTGATTCCTGCCCCATGGAACAACTTGAGAGCTCGGGTTGGCTCAGTCCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GGGTACATGTTCTTTGCGCTTCTCCCGGGGAGACTGGGTCTTGGTGAGCACGTGAAGAGTGGTTTGAAGTaGGGGTTGTGCTTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GYMFFALLPGRLGLGEHVKSGLK*GLCLGP Trigger: CGGACCCAAGCACAACCCCAACTTCAAACCACTCTT...CACGTGCTCACCAAGACCCAGTCTCCCCGGGAGAAGCGCAAAGAACATGTACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | AGCTCTGGGGGACCTCACAGGAAGGCAGGCACCAGGTCTCAGTTTATCAGGCTCAAGAGTGGTTTGAAGTaGGGGTTGTGCTTGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSGGPHRKAGTRSQFIRLKSGLK*GLCLGP Trigger: CGGACCCAAGCACAACCCCAACTTCAAACCACTCTT...GAGCCTGATAAACTGAGACCTGGTGCCTGCCTTCCTGTGAGGTCCCCCAGAGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGCTCTGGTTCAGGGAAGAGTGGTTaGAAGTTGGGGTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DWVLVSTWPDAVSQVCSGSGKSG*KLGLCL Trigger: CAAGCACAACCCCAACTTCAAACCACTCTTCCCTGA...ACCAGAGCACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | CCGGGGAGACTGGGTCTTGGTGAGCACGTGGCCCGATGCTGTCAGCCAAGTGTGGACATAGCCAAGGGTTaGGATACTCTCCTTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: PGRLGLGEHVARCCQPSVDIAKG*DTLLKP Trigger: AGGTTTAAGGAGAGTATCCAAACCCTTGGCTATGTC...CACACTTGGCTGACAGCATCGGGCCACGTGCTCACCAAGACCCAGTCTCCCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS TCA 90 bp | GCTGCTGATCCTCAGAGCACCCACTTTCCACCTCTGGTACTGAGGTaGTGCGGGTTTGGGGGTGAAAGTGAAGAAGCCGGTATTGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: AADPQSTHFPPLVLR*CGFGGESEEAGIGD Trigger: ATCCCCAATACCGGCTTCTTCACTTTCACCCCCAAACCCGCATCACCTCAGTACCAGAGGTGGAAAGTGGGTGCTCTGAGGATCAGCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 90 bp | TGGCGTTGCCCACGCTCGAGCTTCCTGTGCTCATCACATCAAGGATaGAGAAACGGTCACCCTCACACAGTCTGGCCACATCTTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WRCPRSSFLCSSHQG*RNGHPHTVWPHLLS Trigger: AGACAGAAGATGTGGCCAGACTGTGTGAGGGTGACCGTTTCTGCATCCTTGATGTGATGAGCACAGGAAGCTCGAGCGTGGGCAACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 90 bp | ACCTCGAGGCCAGCCCCCGATGACAACATGATTGACACCTTATCCTaGGCGGCCACTGACAGGAACATGCCCTTCAGGTCCATCCAATTT | + |
|
Preference number: 5 (lower is better) Translates to: TSRPAPDDNMIDTLS*AATDRNMPFRSIQF Trigger: AAATTGGATGGACCTGAAGGGCATGTTCCTGTCAGTGGCCGCTCAGGATAAGGTGTCAATCATGTTGTCATCGGGGGCTGGCCTCGAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | CTGGGGAGTGAGGAACTGAAATGGGAGCTTCCAACGCAGGGCTTGGGACATAGGTCAGGGAAGAGTGGTTaGAAGTTGGGGTTGTGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSEELKWELPTQGLGHRSGKSG*KLGLCL Trigger: CAAGCACAACCCCAACTTCAAACCACTCTTCCCTGA...CCTATGTCCCAAGCCCTGCGTTGGAAGCTCCCATTTCAGTTCCTCACTCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS CCA 90 bp | TCATCCCTGGGGTTATTGTTGAGTGTCCCCAGGAGACCACGGGTGTaGGTCAGAAACTTCTCAGGCAACAGAATGCTCACACTCAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSLGLLLSVPRRPRV*VRNFSGNRMLTLRK Trigger: TTTCCTGAGTGTGAGCATTCTGTTGCCTGAGAAGTTTCTGACCCACACCCGTGGTCTCCTGGGGACACTCAACAATAACCCCAGGGATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 90 bp | CCCTTCAGGTCCATCCAATTTTGTTCAGTGAAACTGAGCACTTTCTaGTTCAGCAACACTTCCAAGACCCGAGACCCGCCAGCTAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: PFRSIQFCSVKLSTF*FSNTSKTRDPPANR Trigger: GCGGTTAGCTGGCGGGTCTCGGGTCTTGGAAGTGTTGCTGAATCAGAAAGTGCTCAGTTTCACTGAACAAAATTGGATGGACCTGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GTCCATAGTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTAATACCTGGGGCTGGCTaGCACAGAGCGCACACAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VHSVQGTDTRCGIHRTRVIPGAG*HRAHTV Trigger: CACTGTGTGCGCTCTGTGCAAGCCAGCCCCAGGTAT...TACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACACTATGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | CTTGTATGGGGATGGAAGGGCGTTCCTGAGTATGCTAGAGAAGAGGTAAGAGTATCATCCCTGGGGTTATaGTTGAGTGTCCCCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LVWGWKGVPEYAREEVRVSSLGL*LSVPRR Trigger: TCTCCTGGGGACACTCAACAATAACCCCAGGGATGA...TACTCTTACCTCTTCTCTAGCATACTCAGGAACGCCCTTCCATCCCCATACAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTTGTGTCCCAGGTGAGGTaGAGGTTTCCCCTGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VQGTDTRCGIHRTRVHVLVSQVR*RFPLVS Trigger: AGACACCAGGGGAAACCTCAACCTCACCTGGGACAC...AAGAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCTCCCTGGGGTTATTGTaGAGTGTCCCCAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: VFKAQILDVAFIGLGYMFSLGLL*SVPRRP Trigger: TGGTCTCCTGGGGACACTCAACAATAACCCCAGGGA...GAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS-3UTR CAA 90 bp | GTGTTCAAGGCACAGATACTAGATGTGGCATTCATAGGACTAGGGTACATGTTCCGGGGCCTGGTATTGTaGAGAGCAGCATCAAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VFKAQILDVAFIGLGYMFRGLVL*RAASKS Trigger: GGATTTTGATGCTGCTCTCAACAATACCAGGCCCCG...GAACATGTACCCTAGTCCTATGAATGCCACATCTAGTATCTGTGCCTTGAACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 90 bp | CAGTCCACTTTAAATGTTGCACCACGAAGTCTTTGCCACCCATCATaGACCCTGAGGAGGGTAAAATCTCTAGGCAGTAGTCCAGAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: QSTLNVAPRSLCHPS*TLRRVKSLGSSPEN Trigger: ATTTTCTGGACTACTGCCTAGAGATTTTACCCTCCTCAGGGTCCATGATGGGTGGCAAAGACTTCGTGGTGCAACATTTAAAGTGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | GGCCAGGCACTGTGCTCGGGCCCAGGCTACGGAGTCTaGCCGGAAGTCGTCACCCAGGTGCCAGGCCAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GQALCSGPGYGV*PEVVTQVPGQC Trigger: GCACTGGCCTGGCACCTGGGTGACGACTTCCGGGCAGACTCCGTAGCCTGGGCCCGAGCACAGTGCCTGGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | CTGCAGTCAGCCCTGTGCCACGGGCCTGGGTGCCATTaGGCATTCTCCCAGGCTGGGCCCGGCCCTGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LQSALCHGPGCH*AFSQAGPGPAL Trigger: GAGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCCCAATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | TGGACGGCCACTGCAGTCAGCCCTGTGCCACGGGCCTaGGTGCCATTGGGCATTCTCCCAGGCTGGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: WTATAVSPVPRA*VPLGILPGWAR Trigger: CCGGGCCCAGCCTGGGAGAATGCCCAATGGCACCCAGGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 72 bp | GCCCGGAAGTCGTCACCCAGGTGCCAGGCCAGTGCGTaGTCGTTGGTCCAGAGCGCCCGCACATCCTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ARKSSPRCQASA*SLVQSARTSFS Trigger: AGAGAAGGATGTGCGGGCGCTCTGGACCAACGATCACGCACTGGCCTGGCACCTGGGTGACGACTTCCGGGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | GTCTGCCCGGAAGTCGTCACCCAGGTGCCAGGCCAGTaGGTGATCGTTGGTCCAGAGCGCCCGCACATCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VCPEVVTQVPGQ*VIVGPERPHIL Trigger: AAGGATGTGCGGGCGCTCTGGACCAACGATCACGCACTGGCCTGGCACCTGGGTGACGACTTCCGGGCAGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | CAGCATTGCTGGCCTGAGCCATACCTGGGGCTGGCTTaGACAGAGCGCACACAGTGCACAGCCCCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: QHCWPEPYLGLA*TERTQCTAPGW Trigger: CCACCCAGGGGCTGTGCACTGTGTGCGCTCTGTGCAAGCCAGCCCCAGGTATGGCTCAGGCCAGCAATGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | CGAGCAGGTTGGGTGACAGGAACAGAGTCCATCCTGTaGCCCGCAGCGCAGGGAACAGCTTCCCTGGGCACC | + |
|
Preference number: 6 (lower is better) Translates to: RAGWVTGTESIL*PAAQGTASLGT Trigger: GGTGCCCAGGGAAGCTGTTCCCTGCGCTGCGGGGCACAGGATGGACTCTGTTCCTGTCACCCAACCTGCTCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | GGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTTGGTaGGCAATCCGGGTGGCGTTGCCCACGCTCGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: GCRLFRRCWCSW*AIRVALPTLEL Trigger: AAGCTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 72 bp | ACAGGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTTaGTGGGCAATCCGGGTGGCGTTGCCCACGCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TGCRLFRRCWCS*WAIRVALPTLE Trigger: CTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 72 bp | CCATCCTGTGCCCCGCAGCGCAGGGAACAGCTTCCCTaGGCACCTGCTGTGAACCCGGGGCCTGGTATTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PSCAPQRREQLP*APAVNPGPGIV Trigger: AACAATACCAGGCCCCGGGTTCACAGCAGGTGCCCAGGGAAGCTGTTCCCTGCGCTGCGGGGCACAGGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS CAA 72 bp | CACAGGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTaGGTGGGCAATCCGGGTGGCGTTGCCCACGCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: HRLQALQTVLVQ*VGNPGGVAHAR Trigger: TCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 72 bp | CTGTGTCCCTGCTGCCGTGTAGCAGCATTGCTGGCCTaGGCCATACCTGGGGCTGGCTTGCACAGAGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: LCPCCRVAALLA*AIPGAGLHRAH Trigger: GTGCGCTCTGTGCAAGCCAGCCCCAGGTATGGCTCAGGCCAGCAATGCTGCTACACGGCAGCAGGGACACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | GCAGGTGGGGGTAGCCAGCCACAGGATACCACAGGCTaGAGGCTCTTCAGACGGTGCTGGTGCAGTTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AGGGSQPQDTTG*RLFRRCWCSWW Trigger: CCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGTGGCTGGCTACCCCCACCTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 72 bp | AGTCGTCACCCAGGTGCCAGGCCAGTGCGTGATCGTTaGTCCAGAGCGCCCGCACATCCTTCTCTCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SRHPGARPVRDR*SRAPAHPSLLG Trigger: ACCCAGGAGAGAAGGATGTGCGGGCGCTCTGGACCAACGATCACGCACTGGCCTGGCACCTGGGTGACGACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | GGGTGCAGGGGCAGTCTGGCAGCTCCGTCAGGAAGTTaGGTAGTTGGTCTTCCAATGCCTCCCAGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GCRGSLAAPSGS*VVGLPMPPRPG Trigger: GCCTGGCCTGGGAGGCATTGGAAGACCAACTACCCAACTTCCTGACGGAGCTGCCAGACTGCCCCTGCACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | AGGCCAGGCGTGGGGGTCTGTAGTTGCGGCAGTCACTaGAGGGCCGGCGCTTCATATAACGGGGACACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RPGVGVCSCGSH*RAGASYNGDTQ Trigger: CTGAGTGTCCCCGTTATATGAAGCGCCGGCCCTCCAGTGACTGCCGCAACTACAGACCCCCACGCCTGGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | CAGGATACCACAGGCTGCAGGCTCTTCAGACGGTGCTaGTGCAGTTGGTGGGCAATCCGGGTGGCGTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QDTTGCRLFRRC*CSWWAIRVALP Trigger: GGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CAA 72 bp | CACCCCAGTCGTGGCCACGGTCAGGGGTGCTGCCACTaGTCGAGTCTGAAGTCAGGAGCTGTGTCCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPSRGHGQGCCH*SSLKSGAVSLL Trigger: CAGCAGGGACACAGCTCCTGACTTCAGACTCGACAAGTGGCAGCACCCCTGACCGTGGCCACGACTGGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CAA 90 bp | ACAGGATACCACAGGCTGCAGGCTCTTCAGACGGTGCTGGTGCAGTaGGTGGGCAATCCGGGTGGCGTTGCCCACGCTCGAGCTTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TGYHRLQALQTVLVQ*VGNPGGVAHARASC Trigger: ACAGGAAGCTCGAGCGTGGGCAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 72 bp | GTGGCCACGGTCAGGGGTGCTGCCACTTGTCGAGTCTaGAGTCAGGAGCTGTGTCCCTGCTGCCGTGTAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VATVRGAATCRV*SQELCPCCRVA Trigger: TGCTACACGGCAGCAGGGACACAGCTCCTGACTTCAGACTCGACAAGTGGCAGCACCCCTGACCGTGGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 72 bp | CGCAGCGCAGGGAACAGCTTCCCTGGGCACCTGCTGTaGACCCGGGGCCTGGTATTGTTGAGAGCAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RSAGNSFPGHLL*TRGLVLLRAAS Trigger: TGATGCTGCTCTCAACAATACCAGGCCCCGGGTTCACAGCAGGTGCCCAGGGAAGCTGTTCCCTGCGCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | GTGCCATTGGGCATTCTCCCAGGCTGGGCCCGGCCCTaGACTCTCAGATCACTCAGGGTGGTCTCCAATAGC | + |
|
Preference number: 6 (lower is better) Translates to: VPLGILPGWARP*TLRSLRVVSNS Trigger: GCTATTGGAGACCACCCTGAGTGATCTGAGAGTGCAGGGCCGGGCCCAGCCTGGGAGAATGCCCAATGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS GCA 72 bp | CCACAGGATACCACAGGCTGCAGGCTCTTCAGACGGTaGTGGTGCAGTTGGTGGGCAATCCGGGTGGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PQDTTGCRLFRR*WCSWWAIRVAL Trigger: CAACGCCACCCGGATTGCCCACCAACTGCACCAGCACCGTCTGAAGAGCCTGCAGCCTGTGGTATCCTGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CAA 90 bp | AAGACCCGAGACCCGCCAGCTAACCGCACCTCTATCACATCCGAATaGTCTTCTTGGACGGCCACTGCAGTCAGCCCTGTGCCACGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: KTRDPPANRTSITSE*SSWTATAVSPVPRA Trigger: GGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAAGACAATTCGGATGTGATAGAGGTGCGGTTAGCTGGCGGGTCTCGGGTCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | GGGCAGTCTGGCAGCTCCGTCAGGAAGTTGGGTAGTTaGTCTTCCAATGCCTCCCAGGCCAGGCACTGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQSGSSVRKLGS*SSNASQARHCA Trigger: AGCACAGTGCCTGGCCTGGGAGGCATTGGAAGACCAACTACCCAACTTCCTGACGGAGCTGCCAGACTGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS CAA 90 bp | GGACAACGGATCCTTCCAGGTACCTCAAGCCTTCCTTATGCCCGTTaGCAGGTGGGGGTAGCCAGCCACAGGATACCACAGGCTGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GQRILPGTSSLPYAR*QVGVASHRIPQAAG Trigger: GCCTGCAGCCTGTGGTATCCTGTGGCTGGCTACCCCCACCTGCAAACGGGCATAAGGAAGGCTTGAGGTACCTGGAAGGATCCGTTGTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 72 bp | GAAACAGCCCAGTCGGCTCCAAACTGGAACACCTGCTaGGCACTGGCATTCAGGGGCAGGACCTGCCCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ETAQSAPNWNTC*ALAFRGRTCPL Trigger: CAATGGGCAGGTCCTGCCCCTGAATGCCAGTGCTCAGCAGGTGTTCCAGTTTGGAGCCGACTGGGCTGTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
||
| CDS TCA 72 bp | CTGGGCACCTGCTGTGAACCCGGGGCCTGGTATTGTTaGGAGCAGCATCAAAATCCAAGGCAGGAGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LGTCCEPGAWYC*EQHQNPRQEGQ Trigger: CTGGCCCTCCTGCCTTGGATTTTGATGCTGCTCTCAACAATACCAGGCCCCGGGTTCACAGCAGGTGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
||
| CDS CCA 72 bp | GCTGGCTTGCACAGAGCGCACACAGTGCACAGCCCCTaGGTGGTAGGTGCATACGCTGCCATGTTCAATGTC | + |
|
Preference number: 6 (lower is better) Translates to: AGLHRAHTVHSP*VVGAYAAMFNV Trigger: GACATTGAACATGGCAGCGTATGCACCTACCACCCAGGGGCTGTGCACTGTGTGCGCTCTGTGCAAGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 72 bp | GCTAACCGCACCTCTATCACATCCGAATTGTCTTCTTaGACGGCCACTGCAGTCAGCCCTGTGCCACGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ANRTSITSELSS*TATAVSPVPRA Trigger: GGCCCGTGGCACAGGGCTGACTGCAGTGGCCGTCCAAGAAGACAATTCGGATGTGATAGAGGTGCGGTTAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CAA 90 bp | GGCAGGACCTGCCCATTGCGCAGGGTGAAGTCATCCCTGGGGTTATaGTTGAGTGTCCCCAGGAGACCACGGGTGTGGGTCAGAAACTTC | + |
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Preference number: 6 (lower is better) Translates to: GRTCPLRRVKSSLGL*LSVPRRPRVWVRNF Trigger: GAAGTTTCTGACCCACACCCGTGGTCTCCTGGGGACACTCAACAATAACCCCAGGGATGACTTCACCCTGCGCAATGGGCAGGTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 72 bp | GTACACCGACCTCGAGGCCAGCCCCCGATGACAACATaGTTGACACCTTATCCTGAGCGGCCACTGACAGGA | + |
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Preference number: 6 (lower is better) Translates to: VHRPRGQPPMTT*LTPYPERPLTG Trigger: TCCTGTCAGTGGCCGCTCAGGATAAGGTGTCAATCATGTTGTCATCGGGGGCTGGCCTCGAGGTCGGTGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CAA 72 bp | CCATTGCGCAGGGTGAAGTCATCCCTGGGGTTATTGTaGAGTGTCCCCAGGAGACCACGGGTGTGGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: PLRRVKSSLGLL*SVPRRPRVWVR Trigger: TCTGACCCACACCCGTGGTCTCCTGGGGACACTCAACAATAACCCCAGGGATGACTTCACCCTGCGCAATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CAA 90 bp | AGGACCTGCCCATTGCGCAGGGTGAAGTCATCCCTGGGGTTATTGTaGAGTGTCCCCAGGAGACCACGGGTGTGGGTCAGAAACTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: RTCPLRRVKSSLGLL*SVPRRPRVWVRNFS Trigger: TGAGAAGTTTCTGACCCACACCCGTGGTCTCCTGGGGACACTCAACAATAACCCCAGGGATGACTTCACCCTGCGCAATGGGCAGGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 72 bp | CCTCAGAGCACCCACTTTCCACCTCTGGTACTGAGGTaGTGCGGGTTTGGGGGTGAAAGTGAAGAAGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PQSTHFPPLVLR*CGFGGESEEAG Trigger: ACCGGCTTCTTCACTTTCACCCCCAAACCCGCATCACCTCAGTACCAGAGGTGGAAAGTGGGTGCTCTGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CAA 72 bp | ATCCTTCCAGGTACCTCAAGCCTTCCTTATGCCCGTTaGCAGGTGGGGGTAGCCAGCCACAGGATACCACAG | + |
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Preference number: 6 (lower is better) Translates to: ILPGTSSLPYAR*QVGVASHRIPQ Trigger: CTGTGGTATCCTGTGGCTGGCTACCCCCACCTGCAAACGGGCATAAGGAAGGCTTGAGGTACCTGGAAGGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | CAGAGCGCACACAGTGCACAGCCCCTGGGTGGTAGGTaGATACGCTGCCATGTTCAATGTCACAACCATAGT | + |
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Preference number: 6 (lower is better) Translates to: QSAHSAQPLGGR*IRCHVQCHNHS Trigger: ACTATGGTTGTGACATTGAACATGGCAGCGTATGCACCTACCACCCAGGGGCTGTGCACTGTGTGCGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | CCACGCTCGAGCTTCCTGTGCTCATCACATCAAGGATaGAGAAACGGTCACCCTCACACAGTCTGGCCACAT | + |
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Preference number: 6 (lower is better) Translates to: PRSSFLCSSHQG*RNGHPHTVWPH Trigger: ATGTGGCCAGACTGTGTGAGGGTGACCGTTTCTGCATCCTTGATGTGATGAGCACAGGAAGCTCGAGCGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS TCA 72 bp | ATACGCTGCCATGTTCAATGTCACAACCATAGTCAGTaGAGAAGCGGCCAGAATCAGCCCTGGCCTGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: IRCHVQCHNHSQ*RSGQNQPWPGP Trigger: TGGCCCAGGCCAGGGCTGATTCTGGCCGCTTCTTCACTGACTATGGTTGTGACATTGAACATGGCAGCGTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | CACGGGTGTGGGTCAGAAACTTCTCAGGCAACAGAATaGTCACACTCAGGAAAGGACCTTGTACACCGACCT | + |
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Preference number: 6 (lower is better) Translates to: HGCGSETSQATE*SHSGKDLVHRP Trigger: AGGTCGGTGTACAAGGTCCTTTCCTGAGTGTGAGCATTCTGTTGCCTGAGAAGTTTCTGACCCACACCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | TCTCTAGGCAGTAGTCCAGAAAATCTTCACAACAGGTaGCAAGGCCCGAGCAGGTTGGGTGACAGGAACAGA | + |
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Preference number: 6 (lower is better) Translates to: SLGSSPENLHNR*QGPSRLGDRNR Trigger: TCTGTTCCTGTCACCCAACCTGCTCGGGCCTTGGCACCTGTTGTGAAGATTTTCTGGACTACTGCCTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS CCA 72 bp | GGGTTATTGTTGAGTGTCCCCAGGAGACCACGGGTGTaGGTCAGAAACTTCTCAGGCAACAGAATGCTCACA | + |
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Preference number: 6 (lower is better) Translates to: GLLLSVPRRPRV*VRNFSGNRMLT Trigger: TGTGAGCATTCTGTTGCCTGAGAAGTTTCTGACCCACACCCGTGGTCTCCTGGGGACACTCAACAATAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS GCA 72 bp | GCGGCGATGCAGCATCATATAGATGATAGAGATCAGTaGCACTATGGCCAGGCCTCCGAAGATGATACTCAG | + |
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Preference number: 6 (lower is better) Translates to: AAMQHHIDDRDQ*HYGQASEDDTQ Trigger: CTGAGTATCATCTTCGGAGGCCTGGCCATAGTGGCACTGATCTCTATCATCTATATGATGCTGCATCGCCGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000077610.6 ENSMUST00000095541.11 |
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| CDS CCA 72 bp | TTAAATGTTGCACCACGAAGTCTTTGCCACCCATCATaGACCCTGAGGAGGGTAAAATCTCTAGGCAGTAGT | + |
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Preference number: 6 (lower is better) Translates to: LNVAPRSLCHPS*TLRRVKSLGSS Trigger: ACTACTGCCTAGAGATTTTACCCTCCTCAGGGTCCATGATGGGTGGCAAAGACTTCGTGGTGCAACATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS CAA 72 bp | GTGCACTTGATAGAAGTCGTCGACATAGCCAAGGGTTaGGATACTCTCCTTAAACCTGCAAATGACCCCATC | + |
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Preference number: 6 (lower is better) Translates to: VHLIEVVDIAKG*DTLLKPANDPI Trigger: GATGGGGTCATTTGCAGGTTTAAGGAGAGTATCCAAACCCTTGGCTATGTCGACGACTTCTATCAAGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS TCA 72 bp | GGTGAAGGGAATATAGCCGCTTTCATAGAGCAAGGGTaGTATGCAGTGCACTTGATAGAAGTCGTCGACATA | + |
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Preference number: 6 (lower is better) Translates to: GEGNIAAFIEQG*YAVHLIEVVDI Trigger: TATGTCGACGACTTCTATCAAGTGCACTGCATATCACCCTTGCTCTATGAAAGCGGCTATATTCCCTTCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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| CDS GCA 72 bp | AGGGAATATAGCCGCTTTCATAGAGCAAGGGTGATATaGAGTGCACTTGATAGAAGTCGTCGACATAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: REYSRFHRARVI*SALDRSRRHSQ Trigger: TTGGCTATGTCGACGACTTCTATCAAGTGCACTGCATATCACCCTTGCTCTATGAAAGCGGCTATATTCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095541.11 |
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