Pregenerated sensors for SUSD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038578Ensembl transcript IDs: ENSMUST00000040166.14, ENSMUST00000107544.2
Found 196 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTaGCTCACAGGGTCTGTGGCCTGTGGTGTTACATTGGACATGAGT | + |
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Preference number: 1 (lower is better) Translates to: SHRVCGLSTSSVNRG*LTGSVACGVTLDMS Trigger: ACTCATGTCCAATGTAACACCACAGGCCACAGACCCTGTGAGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 90 bp | ACTCACAGGGTCTGTGGCCTGTGGTGTTACATTGGACATGAGTCTTaGGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACACA | + |
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Preference number: 1 (lower is better) Translates to: THRVCGLWCYIGHES*GHRYTTDPESTKHT Trigger: TGTGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTCCAATGTAACACCACAGGCCACAGACCCTGTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 90 bp | AGTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATaGGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCAGGGC | + |
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Preference number: 1 (lower is better) Translates to: SFKIPQRWLSSQIQE*GHAGLEKVSAPHQG Trigger: GCCCTGGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CCA 90 bp | GAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTGACTCACCACCAGGGCTTAGGATaGGAGCCACACCACAGACGG | + |
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Preference number: 2 (lower is better) Translates to: ESQGLWPVHIQCKQGLTHHQGLG*EPHHRR Trigger: CCGTCTGTGGTGTGGCTCCCATCCTAAGCCCTGGTG...GTGAGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCACCAGGGCTTAGGATaGGAGCCACACCACAGACGG | + |
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Preference number: 2 (lower is better) Translates to: AIISNSGMRSCWVGESFSHQGLG*EPHHRR Trigger: CCGTCTGTGGTGTGGCTCCCATCCTAAGCCCTGGTG...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTAGGGTCTGTGGCCTGTaGTGTTACATTGGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: KEEAEVQHPMSMGPESQGRVCGL*CYIGHE Trigger: CTCATGTCCAATGTAACACCACAGGCCACAGACCCT...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGAGGGTCTGTGGCCTGTaGTGTTACATTGGACATGAG | + |
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Preference number: 2 (lower is better) Translates to: LVSSFINSSPDLSPSHYLRVCGL*CYIGHE Trigger: CTCATGTCCAATGTAACACCACAGGCCACAGACCCT...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTTCTCAAATTCAGGAATaGGGTCATGCTGGGTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: KEEAEVQHPMSMGPESQGSQIQE*GHAGLE Trigger: CTCCAACCCAGCATGACCTCATTCCTGAATTTGAGA...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGAGGTCATGCTGGGTTaGAGAAAGTTTCAGCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: FINSSPDLSPSHYLLRRTEVMLG*RKFQPH Trigger: GTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTC...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGCTGTCAGAACATCTGTaGATCATCAAGTCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: RDGYHLKFRNEVMLGWRKLSEHL*IIKSVF Trigger: GAAGACTGACTTGATGATGCACAGATGTTCTGACAG...CTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR GCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACTGTCAGAACATCTGTaGATCATCAAGTCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: FINSSPDLSPSHYLLRRTLSEHL*IIKSVF Trigger: GAAGACTGACTTGATGATGCACAGATGTTCTGACAG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 72 bp | CAGGGCTTAGGATGGGAGCCACACCACAGACGGGCCTaGGAAGCTGTCAGAACATCTGTGCATCATCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: QGLGWEPHHRRA*EAVRTSVHHQV Trigger: GACTTGATGATGCACAGATGTTCTGACAGCTTCTCAGGCCCGTCTGTGGTGTGGCTCCCATCCTAAGCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 72 bp | GTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTaGCTCACAGGGTCTGTGGCCTGTGGTGTTACATTG | + |
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Preference number: 3 (lower is better) Translates to: VCGLSTSSVNRG*LTGSVACGVTL Trigger: CAATGTAACACCACAGGCCACAGACCCTGTGAGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 72 bp | AGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTaGGTCACAGGGTCTGTGGCCTGTCCACATCCAGTG | + |
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Preference number: 3 (lower is better) Translates to: RGRGSTSNVYGT*VTGSVACPHPV Trigger: CACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR CCA 72 bp | CATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTaGCCTGTCCACATCCAGTGTAAACAGGGGCTGACT | + |
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Preference number: 3 (lower is better) Translates to: HPMSMGPESQGL*PVHIQCKQGLT Trigger: AGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR CCA 72 bp | ATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTaGGTTGGAGAAAGTTTCAGCCCCACACCAGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: MAIISNSGMRSC*VGESFSPTPGL Trigger: AAGCCCTGGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR-3UTR CAA 90 bp | AGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGATCCTGAACTAGCCTGTGGTGTTACATaGGACATGAGTCTTGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: SPDLSPSHYLLRRTDPELACGVT*DMSLEV Trigger: GACCTCAAGACTCATGTCCAATGTAACACCACAGGC...TAGTTCAGGATCTGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 72 bp | ATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATaGGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCA | + |
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Preference number: 3 (lower is better) Translates to: IPQRWLSSQIQE*GHAGLEKVSAP Trigger: TGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR TCA 72 bp | AACGACAGGAATTATATCAAAGCCACGAAGGGAACCTaGGAGAGTAGCCAGGCTATTGTACTTTCTGGTATA | + |
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Preference number: 3 (lower is better) Translates to: NDRNYIKATKGT*ESSQAIVLSGI Trigger: TATACCAGAAAGTACAATAGCCTGGCTACTCTCTCAGGTTCCCTTCGTGGCTTTGATATAATTCCTGTCGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| 3UTR CCA 72 bp | ACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTaGTCTCACACAAACGACAGGAATTATATCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TEWVFLESRHHF*SHTNDRNYIKA Trigger: GGCTTTGATATAATTCCTGTCGTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACTGCAACCCGCATCCTaGAGAGCGGCGCGTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKLQPAS*RAARAP Trigger: CGGGGCACGCGCCGCTCTCCAGGATGCGGGTTGCAG...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCCCTGTCTGGAGCTGTaGTTCCCGACCAAGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGPCLEL*FPTKMA Trigger: CGCCATCTTGGTCGGGAATCACAGCTCCAGACAGGG...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTTGTGGCATCCGTGCGTaGGTGGAAAGGCTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: KEEAEVQHPMSMGPESQGCGIRA*VERLRP Trigger: GGGCCTGAGCCTTTCCACCCACGCACGGATGCCACA...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGCCTCCAGGCGTGTTGTaGCAGGATGTGTGGTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLPPGVL*QDVWFP Trigger: TGGGAACCACACATCCTGCCACAACACGCCTGGAGG...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | CCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTGACTTGTCTGTGGTCACATTaGCTGTCTCCTCATAAACTG | + |
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Preference number: 4 (lower is better) Translates to: PESQGLWPVHIQCKQGLTCLWSH*LSPHKL Trigger: CAGTTTATGAGGAGACAGTCAATGTGACCACAGACA...AGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTGTACATCAGCTGTCTTaGGGCTGCTCCATCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: KEEAEVQHPMSMGPESQGVHQLS*GCSISG Trigger: GCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTAC...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCTGGACAAATGCCTTCTaGTACCATCTCTGGCCCCAA | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGWTNAF*YHLWPQ Trigger: TTGGGGCCAGAGATGGTATCAGAAGGCATTTGTCCA...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | CCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTGACTTTCCATGCAGTAGCATaGAAAGCTCCCAGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: PESQGLWPVHIQCKQGLTFHAVA*KAPRSI Trigger: AATACTCCTGGGAGCTTTGCATGCTACTGCATGGAA...AGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | CCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTGACTCATGTTCATGGCACGTaGCACAGACATCTACATCTT | + |
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Preference number: 4 (lower is better) Translates to: PESQGLWPVHIQCKQGLTHVHGT*HRHLHL Trigger: AAGATGTAGATGTCTGTGCCACGTGCCATGAACATG...AGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
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| CDS-3UTR CCA 90 bp | GAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTGTGGCATCCGTGCGTaGGTGGAAAGGCTCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: EMAIISNSGMRSCWVGESCGIRA*VERLRP Trigger: GGGCCTGAGCCTTTCCACCCACGCACGGATGCCACA...ACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACACCCTGTCTGGAGCTGTaGTTCCCGACCAAGATGGCG | + |
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Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTPCLEL*FPTKMA Trigger: CGCCATCTTGGTCGGGAATCACAGCTCCAGACAGGG...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTGTTATGGTTATTTGTaGGGAGCGCGGCTCAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLCYGYL*GARLSG Trigger: CCCACTGAGCCGCGCTCCGCACAAATAACCATAACA...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | AATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCAGGGTTGTGGCAGGATGTGTaGTTCCCACAGATCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: NSGMRSCWVGESFSPTPGLWQDV*FPQITV Trigger: CACTGTGATCTGTGGGAACCACACATCCTGCCACAA...CCCTGGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCCACAGCTGATCTCTTaGCAATGTAACTTGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGPQLIS*QCNLGG Trigger: ACCTCCCAAGTTACATTGCCAAGAGATCAGCTGTGG...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCTCACTGAGGTTGTTATaGTTATTTGTGCGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGSLRLL*LFVRSA Trigger: CGCGCTCCGCACAAATAACCATAACAACCTCAGTGA...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCTGTCTGTGGTCACATTaGCTGTCTCCTCATAAACTG | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGCLWSH*LSPHKL Trigger: CAGTTTATGAGGAGACAGTCAATGTGACCACAGACA...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | GAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTGGGTTGTCAGGTAGATaGCCACGGGAAGTGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: EMAIISNSGMRSCWVGESGLSGR*PREVPK Trigger: CTTCGGCACTTCCCGTGGTCATCTACCTGACAACCC...ACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCGGGTTGTCAGGTAGATaGCCACGGGAAGTGCCGAAG | + |
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Preference number: 4 (lower is better) Translates to: AIISNSGMRSCWVGESFSGLSGR*PREVPK Trigger: CTTCGGCACTTCCCGTGGTCATCTACCTGACAACCC...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCTTCCATGCAGTAGCATaGAAAGCTCCCAGGAGTATT | + |
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Preference number: 4 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGFHAVA*KAPRSI Trigger: AATACTCCTGGGAGCTTTGCATGCTACTGCATGGAA...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAACGATGTGGCATCCGTaGGTGGGTGGAAAGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTTMWHP*VGGKAQ Trigger: CTGAGCCTTTCCACCCACGCACGGATGCCACATCGT...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | AGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGATCCTGAACTAGATGACCACGGGAAGTaGCGAAGACAGAGCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SPDLSPSHYLLRRTDPELDDHGK*RRQSLK Trigger: CTTCAGGCTCTGTCTTCGGCACTTCCCGTGGTCATC...TAGTTCAGGATCTGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR GCA 90 bp | GAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACAGGGGCTGACTCACAATCACAAGAAAATGTaGTTTGCAAGGACAGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: ESQGLWPVHIQCKQGLTHNHKKM*FARTGE Trigger: TTCCCCTGTCCTTGCAAAGCACATTTTCTTGTGATT...GTGAGTCAGCCCCTGTTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAAGGCGTTCACTCTCTCTaGACTTATTTGCCATCTCAC | + |
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Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKGVHSL*TYLPSH Trigger: GTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCC...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR CCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCTCATCTTCAGGGGTCTaGAAGCCAAGGATGGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: AIISNSGMRSCWVGESFSSSSGV*KPRMAG Trigger: GCCCGCCATCCTTGGCTTCCAGACCCCTGAAGATGA...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS-3UTR TCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCGAAGTGGGGGCTCTGTaGTCTGGGTTGTCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AIISNSGMRSCWVGESFSEVGAL*SGLSGR Trigger: TCTACCTGACAACCCAGATCACAGAGCCCCCACTTC...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACTCTCTGGACTTATTTaGCATCTCACACAGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKLSGLI*HLTQVS Trigger: TGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAG...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAAGAGGGGCTGCAGAAATaGTTATGGTGTAATTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKEGLQK*LWCNWF Trigger: GAACCAATTACACCATAAGCATTTCTGCAGCCCCTC...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGCCAACTTGCCTAGAGTaGCTGCTCAACGTCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLPTCLE*LLNVKQ Trigger: TTGTTTGACGTTGAGCAGGCACTCTAGGCAAGTTGG...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTGTTCTGATCCAACTTaGCTAGAGTGCCTGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLCSDPT*LECLLN Trigger: GTTGAGCAGGCACTCTAGGCAAGTTGGATCAGAACA...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACCCAGAACCTCCACTTaGTACATTTGTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKPRTST*YICSDP Trigger: TGGATCAGAACAAATGTACCAAGTGGAGGTTCTGGG...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTAGAAGAATGCAAGGATaGTCACAAAAGCCACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEEAEVQHPMSMGPESQGRRMQG*SQKPRS Trigger: GCTCCGTGGCTTTTGTGACCATCCTTGCATTCTTCT...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCGAGGGCTGCCACAGCTaGTCTCTTGGCAATGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: AIISNSGMRSCWVGESFSEGCHS*SLGNVT Trigger: AGTTACATTGCCAAGAGATCAGCTGTGGCAGCCCTC...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGAGGGCTGCCACAGCTaGTCTCTTGGCAATGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTEGCHS*SLGNVT Trigger: AGTTACATTGCCAAGAGATCAGCTGTGGCAGCCCTC...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAACCAAGATGGCGTTCTaGATTTCAGGAGGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTTKMAF*ISGGLP Trigger: TGGCAGCCCTCCTGAAATTCAGAACGCCATCTTGGT...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTGCTGCTGGTTGTATTaGAGACCATTTCCTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLCCWLY*RPFPGQ Trigger: TTGTCCAGGAAATGGTCTTCAATACAACCAGCAGCA...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | ATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACGACAGGAAGAAGTGGGGGCTCTGTaGTCTGGGTTGTCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MGFSGKQTSLLVSHKRQEEVGAL*SGLSGR Trigger: TCTACCTGACAACCCAGATCACAGAGCCCCCACTTC...TTCCTGTCGTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGATCCTGAACTAGCCTTCCCCGCACAGTaGAAAAGTCTACTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPDLSPSHYLLRRTDPELAFPAQ*KSLLQE Trigger: TTCCTGAAGTAGACTTTTTCACTGTGCGGGGAAGGC...TAGTTCAGGATCTGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | AATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCAGGGAGTGTTGCCAAAGAATaGAGTCATGCCTTCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: NSGMRSCWVGESFSPTPGSVAKE*SHAFRI Trigger: GATTCTGAAGGCATGACTTCATTCTTTGGCAACACT...CCCTGGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCACACTCATCGATGTCTaGACAGAAAGTGCCGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LKFRNEVMLGWRKFQPHTTLIDV*TESAVI Trigger: AATGACGGCACTTTCTGTGCAGACATCGATGAGTGT...GGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | ATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACGACAGGAAACCGCCCTCCATGTCTaGACAGGCCAGAATCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: MGFSGKQTSLLVSHKRQETALHV*TGQNLH Trigger: GTGAAGATTCTGGCCTGTGCAGACATGGAGGGCGGT...TTCCTGTCGTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACACCTTTTGCTGGCATGTaGCATGTTCATGGCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTPFAGM*HVHGTW Trigger: CCACGTGCCATGAACATGCCACATGCCAGCAAAAGG...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS-3UTR CCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACAGTCTACTTCAGGAAGTaGGGGCTCTGTGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTVYFRK*GLCDLG Trigger: ACCCAGATCACAGAGCCCCCACTTCCTGAAGTAGAC...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACAGCTCCCAGGAGTATTaGCACACCGCCCTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNSSQEY*HTALHV Trigger: GACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCT...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGAGTGTTGCCAAAGAATaGAGTCATGCCTTCAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: LVSSFINSSPDLSPSHYLSVAKE*SHAFRI Trigger: GATTCTGAAGGCATGACTTCATTCTTTGGCAACACT...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAATATTCCATTCACTTGTaGTCCGTAACAGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MSMGPESQGLWPVHIQCKYSIHL*SVTECS Trigger: ACTGCATTCTGTTACGGATCACAAGTGAATGGAATA...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACATTGTGGCAGGATGTGTaGTTCCCACAGATCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTLWQDV*FPQITV Trigger: CACTGTGATCTGTGGGAACCACACATCCTGCCACAA...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACCCTCCAGGCGTGTTGTaGCAGGATGTGTGGTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNPPGVL*QDVWFP Trigger: TGGGAACCACACATCCTGCCACAACACGCCTGGAGG...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACACATATCTCAGGGTCCTaGCTGCTGCTGGTTGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTHISGS*LLLVVL Trigger: CAATACAACCAGCAGCAGCCAGGACCCTGAGATATG...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACATATCTCAGGGTCCTaGCTGCTGCTGGTTGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTHISGS*LLLVVL Trigger: CAATACAACCAGCAGCAGCCAGGACCCTGAGATATG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATAGCTCCCAGGAGTATTaGCACACCGCCCTCCATGTC | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYSSQEY*HTALHV Trigger: GACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCT...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATACGATGTGGCATCCGTaGGTGGGTGGAAAGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYTMWHP*VGGKAQ Trigger: CTGAGCCTTTCCACCCACGCACGGATGCCACATCGT...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GACATGAGTCTTGAGGTCACAGATATACAACTGATCCAGAAAGCACGAAGCACAGAACTTCAGGAGGGATaGCACAGTCTATTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DMSLEVTDIQLIQKARSTELQEG*HSLFLC Trigger: GCACAGAAATAGACTGTGGCATCCCTCCTGAAGTTC...TGTGCTTCGTGCTTTCTGGATCAGTTGTATATCTGTGACCTCAAGACTCATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGAACTTCAGGAGGGATaGCACAGTCTATTTCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTELQEG*HSLFLC Trigger: GCACAGAAATAGACTGTGGCATCCCTCCTGAAGTTC...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGATCCTGAACTAGAGGGGCTGCAGAAATaGTTATGGTGTAATTGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPDLSPSHYLLRRTDPELEGLQK*LWCNWF Trigger: GAACCAATTACACCATAAGCATTTCTGCAGCCCCTC...TAGTTCAGGATCTGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | AGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTGTTCTGATCCAACTTaGCTAGAGTGCCTGCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RDGYHLKFRNEVMLGWRKCSDPT*LECLLN Trigger: GTTGAGCAGGCACTCTAGGCAAGTTGGATCAGAACA...CTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCCATGTGGCATGTTCATaGCACGTGGCACAGACATCT | + |
|
Preference number: 4 (lower is better) Translates to: MAIISNSGMRSCWVGESFHVACS*HVAQTS Trigger: AGATGTCTGTGCCACGTGCCATGAACATGCCACATG...GAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS-3UTR CCA 90 bp | AGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTCCCTTCCTTTTGCTaGCATGTGGCATGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: RDGYHLKFRNEVMLGWRKFPSFC*HVACSW Trigger: CCATGAACATGCCACATGCCAGCAAAAGGAAGGGAA...CTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS-3UTR CCA 90 bp | ATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCTCCCACAGATCACAGTaGCTCCAAACTGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: MAIISNSGMRSCWVGESFSHRSQ*LQTGTH Trigger: ATGAGTGCCAGTTTGGAGCCACTGTGATCTGTGGGA...GAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATTCATCTTCAGGGGTCTaGAAGCCAAGGATGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYSSSGV*KPRMAG Trigger: GCCCGCCATCCTTGGCTTCCAGACCCCTGAAGATGA...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTCACTGAGGTTGTTATaGTTATTTGTGCGGAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIISNSGMRSCWVGESSLRLL*LFVRSA Trigger: CGCGCTCCGCACAAATAACCATAACAACCTCAGTGA...ACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATGTACATCAGCTGTCTTaGGGCTGCTCCATCTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYVHQLS*GCSISG Trigger: GCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTAC...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACATGCTGCTGGTTGTATTaGAGACCATTTCCTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTCCWLY*RPFPGQ Trigger: TTGTCCAGGAAATGGTCTTCAATACAACCAGCAGCA...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATGATGACCACGGGAAGTaGCGAAGACAGAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYDDHGK*RRQSLK Trigger: CTTCAGGCTCTGTCTTCGGCACTTCCCGTGGTCATC...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCAGCAGGAGAAGTGTTaGCAAAGAATGAAGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: AIISNSGMRSCWVGESFSQQEKC*QRMKSC Trigger: GCATGACTTCATTCTTTGGCAACACTTCTCCTGCTG...GCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACCCAGAACCTCCACTTaGTACATTTGTTCTGATCCA | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTPRTST*YICSDP Trigger: TGGATCAGAACAAATGTACCAAGTGGAGGTTCTGGG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACCCAAAACCCATAGTTaGAAATGCAGATTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTPKTHS*KCRFSS Trigger: GGAAGAGAATCTGCATTTGCAACTATGGGTTTTGGG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCCATTATTTCTGTGCATaGATAAGTGATTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKFRNEVMLGWRKFQPHTHYFCA*ISDFTP Trigger: TGGAGTGAAATCACTTATGCATGCACAGAAATAATG...GGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTCATTTCCTGGACAAATaGCTTCTGATACCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EMAIISNSGMRSCWVGESHFLDK*LLIPSL Trigger: CAGAGATGGTATCAGAAGGCATTTGTCCAGGAAATG...ACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | CTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCCAAAGAATGAAGTCATaGCTTCAGAATCACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LKFRNEVMLGWRKFQPHTQRMKS*LQNHKK Trigger: TTTCTTGTGATTCTGAAGGCATGACTTCATTCTTTG...GGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATGTCTACTTCAGGAAGTaGGGGCTCTGTGATCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYVYFRK*GLCDLG Trigger: ACCCAGATCACAGAGCCCCCACTTCCTGAAGTAGAC...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATGCCTTCCCCGCACAGTaGAAAAGTCTACTTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYAFPAQ*KSLLQE Trigger: TTCCTGAAGTAGACTTTTTCACTGTGCGGGGAAGGC...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACCCAACTTGCCTAGAGTaGCTGCTCAACGTCAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNPTCLE*LLNVKQ Trigger: TTGTTTGACGTTGAGCAGGCACTCTAGGCAAGTTGG...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATTCCCACAGATCACAGTaGCTCCAAACTGGCACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYSHRSQ*LQTGTH Trigger: ATGAGTGCCAGTTTGGAGCCACTGTGATCTGTGGGA...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCCACAGCTGATCTCTTaGCAATGTAACTTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VLRFHRDGYHLKFRNEVMPQLIS*QCNLGG Trigger: ACCTCCCAAGTTACATTGCCAAGAGATCAGCTGTGG...CATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACGGCGTTCACTCTCTCTaGACTTATTTGCCATCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNGVHSL*TYLPSH Trigger: GTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCC...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACTCTGGCCCCAAATGTaGAATAAATACATCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTLWPQM*NKYISS Trigger: ACTAGAGATGTATTTATTCCACATTTGGGGCCAGAG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACAGAAGAATGCAAGGATaGTCACAAAAGCCACGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNRRMQG*SQKPRS Trigger: GCTCCGTGGCTTTTGTGACCATCCTTGCATTCTTCT...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACCTCTCTGGACTTATTTaGCATCTCACACAGGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNLSGLI*HLTQVS Trigger: TGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAG...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCAGCAGGAGAAGTGTTaGCAAAGAATGAAGTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: VLRFHRDGYHLKFRNEVMQQEKC*QRMKSC Trigger: GCATGACTTCATTCTTTGGCAACACTTCTCCTGCTG...CATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | GAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTCTGCAGAAATGCTTATaGTGTAATTGGTTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EMAIISNSGMRSCWVGESLQKCL*CNWFLV Trigger: AACAAGGAACCAATTACACCATAAGCATTTCTGCAG...ACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCATCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCCCAAAACCCATAGTTaGAAATGCAGATTCTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLRFHRDGYHLKFRNEVMPKTHS*KCRFSS Trigger: GGAAGAGAATCTGCATTTGCAACTATGGGTTTTGGG...CATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATACACTCATCGATGTCTaGACAGAAAGTGCCGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYTLIDV*TESAVI Trigger: AATGACGGCACTTTCTGTGCAGACATCGATGAGTGT...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACACATTATTTCTGTGCATaGATAAGTGATTTCACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FINSSPDLSPSHYLLRRTHYFCA*ISDFTP Trigger: TGGAGTGAAATCACTTATGCATGCACAGAAATAATG...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCATTTCCTGGACAAATaGCTTCTGATACCATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLRFHRDGYHLKFRNEVMHFLDK*LLIPSL Trigger: CAGAGATGGTATCAGAAGGCATTTGTCCAGGAAATG...CATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR TCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACTATTCCATTCACTTGTaGTCCGTAACAGAATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNYSIHL*SVTECS Trigger: ACTGCATTCTGTTACGGATCACAAGTGAATGGAATA...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTAAGATTCCACAGAGATGGCTATCATCTCAAATTCAGGAATGAGGTCATGAATCACAAGAAAATGTaGTTTGCAAGGACAGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLRFHRDGYHLKFRNEVMNHKKM*FARTGE Trigger: TTCCCCTGTCCTTGCAAAGCACATTTTCTTGTGATT...CATGACCTCATTCCTGAATTTGAGATGATAGCCATCTCTGTGGAATCTTAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACCTCTGGCCCCAAATGTaGAATAAATACATCTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITEWVFLESRHHFWSHTNLWPQM*NKYISS Trigger: ACTAGAGATGTATTTATTCCACATTTGGGGCCAGAG...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| 3UTR CAA 72 bp | TACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTaGGTCTCACACAAACGACAGGAATTATATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: YRMGFSGKQTSL*VSHKRQELYQS Trigger: GCTTTGATATAATTCCTGTCGTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATCTGCAGAAATGCTTATaGTGTAATTGGTTCCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYLQKCL*CNWFLV Trigger: AACAAGGAACCAATTACACCATAAGCATTTCTGCAG...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR GCA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATCAAAGAATGAAGTCATaGCTTCAGAATCACAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: WYRPGANPKMLETFIHIYQRMKS*LQNHKK Trigger: TTTCTTGTGATTCTGAAGGCATGACTTCATTCTTTG...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | GGTCTGGAAGCCAAGGATGGCGGGCACAGAGCGCCTGGGAGGGGCTaGAGAAATGCTTATGGTGTAATTGGTTCCTTGTTGGAGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GLEAKDGGHRAPGRG*RNAYGVIGSLLEVQ Trigger: CTGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCTCCCAGGCGCTCTGTGCCCGCCATCCTTGGCTTCCAGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | ACACACCCAGGGCTGTGCATCGTGAAATTCTGTCTCCTGAGACGCTaGGAAACCCTTCCTTGCAGCTATAATGGGCCTGGCCGCCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: THPGLCIVKFCLLRR*ETLPCSYNGPGRPV Trigger: CACTGGGCGGCCAGGCCCATTATAGCTGCAAGGAAGGGTTTCTCAGCGTCTCAGGAGACAGAATTTCACGATGCACAGCCCTGGGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | AGCCAAGGATGGCGGGCACAGAGCGCCTGGGAGGGGCTGCAGAAATaGTTATGGTGTAATTGGTTCCTTGTTGGAGGTGCAGGCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: SQGWRAQSAWEGLQK*LWCNWFLVGGAGTL Trigger: AAGTGTGCCTGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCTCCCAGGCGCTCTGTGCCCGCCATCCTTGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | TGGGGGCTCTGTGATCTGGGTTGTCAGGTAGATGACCACGGGAAGTaGCGAAGACAGAGCCTGAAGGCTAACGTTGTAGCTGGTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: WGLCDLGCQVDDHGK*RRQSLKANVVAGAL Trigger: CAAGGCACCAGCTACAACGTTAGCCTTCAGGCTCTGTCTTCGGCACTTCCCGTGGTCATCTACCTGACAACCCAGATCACAGAGCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | ATGGTCACAAAAGCCACGGAGCCCAGTCCAACACCCACCATCTGCTaGGCTGTGAGCGATGAGTCTTTTACCTCAGCCCAGACAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MVTKATEPSPTPTIC*AVSDESFTSAQTAQ Trigger: CTGTGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCGTGGCTTTTGTGACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | AGGATGGTCACAAAAGCCACGGAGCCCAGTCCAACACCCACCATCTaGTGCGCTGTGAGCGATGAGTCTTTTACCTCAGCCCAGACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RMVTKATEPSPTPTI*CAVSDESFTSAQTA Trigger: TGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCGTGGCTTTTGTGACCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | CGTCATCTTCTAAGAGATCATCTTCAGGGGTCTGGAAGCCAAGGATaGCGGGCACAGAGCGCCTGGGAGGGGCTGCAGAAATGCTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: RHLLRDHLQGSGSQG*RAQSAWEGLQKCLW Trigger: CCATAAGCATTTCTGCAGCCCCTCCCAGGCGCTCTGTGCCCGCCATCCTTGGCTTCCAGACCCCTGAAGATGATCTCTTAGAAGATGACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | TCCCGACCAAGATGGCGTTCTGAATTTCAGGAGGGCTGCCACAGCTaGTCTCTTGGCAATGTAACTTGGGAGGTTCCCACACACCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SRPRWRSEFQEGCHS*SLGNVTWEVPTHPG Trigger: CCCTGGGTGTGTGGGAACCTCCCAAGTTACATTGCCAAGAGATCAGCTGTGGCAGCCCTCCTGAAATTCAGAACGCCATCTTGGTCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | CACGGAGCCCAGTCCAACACCCACCATCTGCTGCGCTGTGAGCGATaGGTCTTTTACCTCAGCCCAGACAGCACAGGAATATCTTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HGAQSNTHHLLRCER*VFYLSPDSTGISSH Trigger: GTGAGAAGATATTCCTGTGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | CAAAAGCCACGGAGCCCAGTCCAACACCCACCATCTGCTGCGCTGTaGGCGATGAGTCTTTTACCTCAGCCCAGACAGCACAGGAATATC | + |
|
Preference number: 5 (lower is better) Translates to: QKPRSPVQHPPSAAL*AMSLLPQPRQHRNI Trigger: GATATTCCTGTGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCGTGGCTTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | AGGCTCAGGCCCGTTCTTTGCCACATACCCTTCCATGCAGTAGCATaGAAAGCTCCCAGGAGTATTGACACACCGCCCTCCATGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLRPVLCHIPFHAVA*KAPRSIDTPPSMSA Trigger: TGCAGACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCTTTGCATGCTACTGCATGGAAGGGTATGTGGCAAAGAACGGGCCTGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | ATGCCACAGTCTATTTCTGTGCACGATGTGGCATCCGTGCGTGGGTaGAAAGGCTCAGGCCCGTTCTTTGCCACATACCCTTCCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: MPQSISVHDVASVRG*KGSGPFFATYPSMQ Trigger: CTGCATGGAAGGGTATGTGGCAAAGAACGGGCCTGAGCCTTTCCACCCACGCACGGATGCCACATCGTGCACAGAAATAGACTGTGGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | AGGGATGCCACAGTCTATTTCTGTGCACGATGTGGCATCCGTGCGTaGGTGGAAAGGCTCAGGCCCGTTCTTTGCCACATACCCTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RDATVYFCARCGIRA*VERLRPVLCHIPFH Trigger: ATGGAAGGGTATGTGGCAAAGAACGGGCCTGAGCCTTTCCACCCACGCACGGATGCCACATCGTGCACAGAAATAGACTGTGGCATCCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | GCACAGAGCGCCTGGGAGGGGCTGCAGAAATGCTTATGGTGTAATTaGTTCCTTGTTGGAGGTGCAGGCACACTTCTGGGGTTCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: AQSAWEGLQKCLWCN*FLVGGAGTLLGFCC Trigger: ACAGCAGAACCCCAGAAGTGTGCCTGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCTCCCAGGCGCTCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | CTCCAGGCGTGTTGTGGCAGGATGTGTGGTTCCCACAGATCACAGTaGCTCCAAACTGGCACTCATCTTTGTACACCGTGTCCTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQACCGRMCGSHRSQ*LQTGTHLCTPCPPV Trigger: AACGGGAGGACACGGTGTACAAAGATGAGTGCCAGTTTGGAGCCACTGTGATCTGTGGGAACCACACATCCTGCCACAACACGCCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | ATGCAGATTCTCTTCCCTTCCTTTTGCTGGCATGTGGCATGTTCATaGCACGTGGCACAGACATCTACATCTTCCGTGCCAGGCTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: MQILFPSFCWHVACS*HVAQTSTSSVPGSP Trigger: CGGAGAGCCTGGCACGGAAGATGTAGATGTCTGTGCCACGTGCCATGAACATGCCACATGCCAGCAAAAGGAAGGGAAGAGAATCTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS TCA 90 bp | CTTCACACTCATCGATGTCTGCACAGAAAGTGCCGTCATTGGGGATaGACGTCTCGTTGTTATTTGTGGCCCGGTAGCCCTCGTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LHTHRCLHRKCRHWG*TSRCYLWPGSPRGK Trigger: TTTGCCACGAGGGCTACCGGGCCACAAATAACAACGAGACGTTCATCCCCAATGACGGCACTTTCTGTGCAGACATCGATGAGTGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | TCTCAAAGCCCTCCTGACAGTCATAATGAGCCACACTCCCCTGTCTaGAGCTGTGATTCCCGACCAAGATGGCGTTCTGAATTTCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SQSPPDSHNEPHSPV*SCDSRPRWRSEFQE Trigger: CTCCTGAAATTCAGAACGCCATCTTGGTCGGGAATCACAGCTCCAGACAGGGGAGTGTGGCTCATTATGACTGTCAGGAGGGCTTTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTAAGCTCCCAGGAGTATaGACACACCGCCCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: KEEAEVQHPMSMGPESQGKLPGV*THRPPC Trigger: ACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCTT...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAGCCCCACACCAGGGAGTACATCAGCTGTCTaGAGGCTGCTCCATCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NSGMRSCWVGESFSPTPGSTSAV*RLLHLR Trigger: CCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACT...CCCTGGTGTGGGGCTGAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | CAGCATCCGGCTGCTGTCTTTCAACGCGTATCAAGTACACGATCCTaGCGTTCACTCTCTCTGGACTTATTTGCCATCTCACACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QHPAAVFQRVSSTRS*RSLSLDLFAISHRC Trigger: ACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTACTTGATACGCGTTGAAAGACAGCAGCCGGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | CCCATAGTAGAGCCTGTCTCCAATAGATATCTCCAACGTGTCGTCTaGAACATCACTGGCCAGGATTTCTGCAGCCACATATCCGTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PIVEPVSNRYLQRVV*NITGQDFCSHISVS Trigger: GCTGACGGATATGTGGCTGCAGAAATCCTGGCCAGTGATGTTCCAGACGACACGTTGGAGATATCTATTGGAGACAGGCTCTACTATGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGATCCTGAACTAAACCCTCCAGGCGTGTaGTGGCAGGATGTGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPDLSPSHYLLRRTDPELNPPGV*WQDVWF Trigger: GAACCACACATCCTGCCACAACACGCCTGGAGGGTT...TAGTTCAGGATCTGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | CTGGTGAGCTCCTTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTCTTGGCAATGTAACTaGGGAGGTTCCCACACACCC | + |
|
Preference number: 5 (lower is better) Translates to: LVSSFINSSPDLSPSHYLSWQCN*GGSHTP Trigger: GGGTGTGTGGGAACCTCCCAAGTTACATTGCCAAGA...CAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAAGGAGCTCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTGGTGTAATTGGTTCCTaGTTGGAGGTGCAGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: KEEAEVQHPMSMGPESQGGVIGS*LEVQAH Trigger: GTGTGCCTGCACCTCCAACAAGGAACCAATTACACC...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGCTGCTGGTTGTATaGAAGACCATTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: RQRFNIQCLWDLSHRVCGLLLVV*KTISWT Trigger: TGTCCAGGAAATGGTCTTCAATACAACCAGCAGCAG...GCCACAGACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | TGGGGTTCTGCTGTCTGTGGTCACATTGACTGTCTCCTCATAAACTaGTTCCGCAGCATCCGGCTGCTGTCTTTCAACGCGTATCAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WGSAVCGHIDCLLIN*FRSIRLLSFNAYQV Trigger: TACTTGATACGCGTTGAAAGACAGCAGCCGGATGCTGCGGAATCAGTTTATGAGGAGACAGTCAATGTGACCACAGACAGCAGAACCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTGTAATTGGTTCCTTGTaGGAGGTGCAGGCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: KEEAEVQHPMSMGPESQGVIGSL*EVQAHF Trigger: GAAGTGTGCCTGCACCTCCAACAAGGAACCAATTAC...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | ATGTCTATGGGACCTGAGTCACAGGGTCTGTGGCCTGTCCACATCCAGTGTAAACTGCTGCTGGTTGTATaGAAGACCATTTCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MSMGPESQGLWPVHIQCKLLLVV*KTISWT Trigger: TGTCCAGGAAATGGTCTTCAATACAACCAGCAGCAG...TTTACACTGGATGTGGACAGGCCACAGACCCTGTGACTCAGGTCCCATAGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | ATGGCTATCATCTCAAATTCAGGAATGAGGTCATGCTGGGTTGGAGAAAGTTTCAACCCTCCAGGCGTGTaGTGGCAGGATGTGTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MAIISNSGMRSCWVGESFNPPGV*WQDVWF Trigger: GAACCACACATCCTGCCACAACACGCCTGGAGGGTT...GAAACTTTCTCCAACCCAGCATGACCTCATTCCTGAATTTGAGATGATAGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGAGGCAGAGGTTCAACATCCAATGTCTATGGGACCTGAGTCACAGGGTTCTCTCTGGACTTATTaGCCATCTCACACAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KEEAEVQHPMSMGPESQGSLWTY*PSHTGV Trigger: GACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGA...ACCCTGTGACTCAGGTCCCATAGACATTGGATGTTGAACCTCTGCCTCTTCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | ATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACGACAGGAAAAGCTCCCAGGAGTATaGACACACCGCCCTCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: MGFSGKQTSLLVSHKRQEKLPGV*THRPPC Trigger: ACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCTT...TTCCTGTCGTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 90 bp | TGGCCAGGATTTCTGCAGCCACATATCCGTCAGCAGGAGAAGTGTTaGCAAAGAATGAAGTCATGCCTTCAGAATCACAAGAAAATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WPGFLQPHIRQQEKC*QRMKSCLQNHKKMC Trigger: GCACATTTTCTTGTGATTCTGAAGGCATGACTTCATTCTTTGGCAACACTTCTCCTGCTGACGGATATGTGGCTGCAGAAATCCTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | TTCATCAATTCCAGCCCAGACTTAAGCCCATCTCATTACCTGTTGAGGAGAACAGTAATTGGTTCCTTGTaGGAGGTGCAGGCACACTTC | + |
|
Preference number: 5 (lower is better) Translates to: FINSSPDLSPSHYLLRRTVIGSL*EVQAHF Trigger: GAAGTGTGCCTGCACCTCCAACAAGGAACCAATTAC...TGTTCTCCTCAACAGGTAATGAGATGGGCTTAAGTCTGGGCTGGAATTGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 90 bp | TCTTTCAACGCGTATCAAGTACACGATCCTGGCGTTCACTCTCTCTaGACTTATTTGCCATCTCACACAGGTGTCATTAAACACCAACAC | + |
|
Preference number: 5 (lower is better) Translates to: SFNAYQVHDPGVHSL*TYLPSHTGVIKHQH Trigger: GTGTTGGTGTTTAATGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTACTTGATACGCGTTGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | ATCATTATATACCGAAATATTAGCGATGGTCTGTTTTGCTGTCACTaGGGTTGTTATGGTTATTTGTGCGGAGCGCGGCTCAGTGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: IIIYRNISDGLFCCH*GCYGYLCGARLSGS Trigger: AGACCCACTGAGCCGCGCTCCGCACAAATAACCATAACAACCTCAGTGACAGCAAAACAGACCATCGCTAATATTTCGGTATATAATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | AGAAAATGTGCTTTGCAAGGACAGGGGAAGGACCAACACCTGATATaGACTGATAGGTCCATTTATCTCCTTGACTTTCCTCAGCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RKCALQGQGKDQHLI*TDRSIYLLDFPQRE Trigger: TTCACGCTGAGGAAAGTCAAGGAGATAAATGGACCTATCAGTTCATATCAGGTGTTGGTCCTTCCCCTGTCCTTGCAAAGCACATTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | TCACAAGAAAATGTGCTTTGCAAGGACAGGGGAAGGACCAACACCTaGTATGAACTGATAGGTCCATTTATCTCCTTGACTTTCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SQENVLCKDRGRTNT*YELIGPFISLTFLS Trigger: GCTGAGGAAAGTCAAGGAGATAAATGGACCTATCAGTTCATATCAGGTGTTGGTCCTTCCCCTGTCCTTGCAAAGCACATTTTCTTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | ATTACAGAATGGGTTTTTCTGGAAAGCAGACATCACTTTTGGTCTCACACAAACAGTACATCAGCTGTCTaGAGGCTGCTCCATCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ITEWVFLESRHHFWSHTNSTSAV*RLLHLR Trigger: CCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACT...GTTTGTGTGAGACCAAAAGTGATGTCTGCTTTCCAGAAAAACCCATTCTGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS-3UTR CAA 90 bp | TGGTATAGGCCAGGGGCGAATCCTAAAATGCTTGAAACATTTATTCATATCTATGGTGTAATTGGTTCCTaGTTGGAGGTGCAGGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: WYRPGANPKMLETFIHIYGVIGS*LEVQAH Trigger: GTGTGCCTGCACCTCCAACAAGGAACCAATTACACC...ATAGATATGAATAAATGTTTCAAGCATTTTAGGATTCGCCCCTGGCCTATACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 90 bp | GGCCCCAAATGTGGAATAAATACATCTCTAGTACATCAGCTGTCTTaGGGCTGCTCCATCTCAGGCAGGTATCATTATATACCGAAATAT | + |
|
Preference number: 5 (lower is better) Translates to: GPKCGINTSLVHQLS*GCSISGRYHYIPKY Trigger: ATATTTCGGTATATAATGATACCTGCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACTAGAGATGTATTTATTCCACATTTGGGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | GCTAGGCTGAGCAGCAGCACGAGCCGCAGCAGCCGCTaGAACCCGCATCCTGGAGAGCGGCGCGTGCCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ARLSSSTSRSSR*NPHPGERRVPR Trigger: CCGGGGCACGCGCCGCTCTCCAGGATGCGGGTTGCAGCGGCTGCTGCGGCTCGTGCTGCTGCTCAGCCTAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS TCA 72 bp | CGGAGCCCAGTCCAACACCCACCATCTGCTGCGCTGTaGGCGATGAGTCTTTTACCTCAGCCCAGACAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: RSPVQHPPSAAL*AMSLLPQPRQH Trigger: GTGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | CTTCCTTGCAGCTATAATGGGCCTGGCCGCCCAGTGTaGAGCTGTAGCTTCCCACGACGTAGCCCTCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPCSYNGPGRPV*SCSFPRRSPQE Trigger: TTCCTGAGGGCTACGTCGTGGGAAGCTACAGCTCCACACTGGGCGGCCAGGCCCATTATAGCTGCAAGGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | CTAAGAGATCATCTTCAGGGGTCTGGAAGCCAAGGATaGCGGGCACAGAGCGCCTGGGAGGGGCTGCAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: LRDHLQGSGSQG*RAQSAWEGLQK Trigger: TTTCTGCAGCCCCTCCCAGGCGCTCTGTGCCCGCCATCCTTGGCTTCCAGACCCCTGAAGATGATCTCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | CGTTGTTATTTGTGGCCCGGTAGCCCTCGTGGCAAATaGAGTAGAACCCTCCAGGCGTGTTGTGGCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: RCYLWPGSPRGK*SRTLQACCGRM Trigger: CATCCTGCCACAACACGCCTGGAGGGTTCTACTGCATTTGCCACGAGGGCTACCGGGCCACAAATAACAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | TGCCACAGTCTATTTCTGTGCACGATGTGGCATCCGTaGGTGGGTGGAAAGGCTCAGGCCCGTTCTTTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CHSLFLCTMWHP*VGGKAQARSLP Trigger: TGGCAAAGAACGGGCCTGAGCCTTTCCACCCACGCACGGATGCCACATCGTGCACAGAAATAGACTGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | TGGCGGGCACAGAGCGCCTGGGAGGGGCTGCAGAAATaGTTATGGTGTAATTGGTTCCTTGTTGGAGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: WRAQSAWEGLQK*LWCNWFLVGGA Trigger: TGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCTCCCAGGCGCTCTGTGCCCGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | ACAAAAGCCACGGAGCCCAGTCCAACACCCACCATCTaGTGCGCTGTGAGCGATGAGTCTTTTACCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TKATEPSPTPTI*CAVSDESFTSA Trigger: GGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTGGGCTCCGTGGCTTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | AGTCCGTCATCTTCTAAGAGATCATCTTCAGGGGTCTaGAAGCCAAGGATGGCGGGCACAGAGCGCCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSSKRSSSGV*KPRMAGTERLG Trigger: TCCCAGGCGCTCTGTGCCCGCCATCCTTGGCTTCCAGACCCCTGAAGATGATCTCTTAGAAGATGACGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | CAGGAACTTCAGGAGGGATGCCACAGTCTATTTCTGTaGACGATGTGGCATCCGTGCGTGGGTGGAAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QELQEGCHSLFL*TMWHPCVGGKA Trigger: AGCCTTTCCACCCACGCACGGATGCCACATCGTGCACAGAAATAGACTGTGGCATCCCTCCTGAAGTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | TCTATTTCTGTGCACGATGTGGCATCCGTGCGTGGGTaGAAAGGCTCAGGCCCGTTCTTTGCCACATACCCT | + |
|
Preference number: 6 (lower is better) Translates to: SISVHDVASVRG*KGSGPFFATYP Trigger: AGGGTATGTGGCAAAGAACGGGCCTGAGCCTTTCCACCCACGCACGGATGCCACATCGTGCACAGAAATAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | GCCTGGGAGGGGCTGCAGAAATGCTTATGGTGTAATTaGTTCCTTGTTGGAGGTGCAGGCACACTTCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: AWEGLQKCLWCN*FLVGGAGTLLG Trigger: CCCCAGAAGTGTGCCTGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCTCCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CAA 72 bp | AGACAGAGCCTGAAGGCTAACGTTGTAGCTGGTGCCTaGATGCAGGTCCAGGCATATCTCAGGGTCCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RQSLKANVVAGA*MQVQAYLRVLA Trigger: AGCCAGGACCCTGAGATATGCCTGGACCTGCATCAAGGCACCAGCTACAACGTTAGCCTTCAGGCTCTGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 72 bp | CTTCCATGCAGTAGCATGCAAAGCTCCCAGGAGTATTaGCACACCGCCCTCCATGTCTGCACAGGCCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LPCSSMQSSQEY*HTALHVCTGQN Trigger: ATTCTGGCCTGTGCAGACATGGAGGGCGGTGTGTCAATACTCCTGGGAGCTTTGCATGCTACTGCATGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 72 bp | GGGCTGTGCATCGTGAAATTCTGTCTCCTGAGACGCTaGGAAACCCTTCCTTGCAGCTATAATGGGCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: GLCIVKFCLLRR*ETLPCSYNGPG Trigger: GCCAGGCCCATTATAGCTGCAAGGAAGGGTTTCTCAGCGTCTCAGGAGACAGAATTTCACGATGCACAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS TCA 72 bp | CAGTCCAACACCCACCATCTGCTGCGCTGTGAGCGATaGGTCTTTTACCTCAGCCCAGACAGCACAGGAATA | + |
|
Preference number: 6 (lower is better) Translates to: QSNTHHLLRCER*VFYLSPDSTGI Trigger: TATTCCTGTGCTGTCTGGGCTGAGGTAAAAGACTCATCGCTCACAGCGCAGCAGATGGTGGGTGTTGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | CAACGTGTCGTCTGGAACATCACTGGCCAGGATTTCTaGAGCCACATATCCGTCAGCAGGAGAAGTGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: QRVVWNITGQDF*SHISVSRRSVA Trigger: GGCAACACTTCTCCTGCTGACGGATATGTGGCTGCAGAAATCCTGGCCAGTGATGTTCCAGACGACACGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | CCTCCTGACAGTCATAATGAGCCACACTCCCCTGTCTaGAGCTGTGATTCCCGACCAAGATGGCGTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: PPDSHNEPHSPV*SCDSRPRWRSE Trigger: TTCAGAACGCCATCTTGGTCGGGAATCACAGCTCCAGACAGGGGAGTGTGGCTCATTATGACTGTCAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CAA 72 bp | CCACAGATCACAGTGGCTCCAAACTGGCACTCATCTTaGTCAACACACCGTGTCCTCCCGTTGCCCCAAAAC | + |
|
Preference number: 6 (lower is better) Translates to: PQITVAPNWHSS*STHRVLPLPQN Trigger: GTTTTGGGGCAACGGGAGGACACGGTGTGTTGACAAAGATGAGTGCCAGTTTGGAGCCACTGTGATCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS CAA 72 bp | CCACAGATCACAGTGGCTCCAAACTGGCACTCATCTTaGTACACCGTGTCCTCCCGTTGCCCCAAAACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PQITVAPNWHSS*YTVSSRCPKTH Trigger: ATGGGTTTTGGGGCAACGGGAGGACACGGTGTACAAAGATGAGTGCCAGTTTGGAGCCACTGTGATCTGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000107544.2 |
||
| CDS TCA 72 bp | GCTGTCTGTGGTCACATTGACTGTCTCCTCATAAACTaGTTCCGCAGCATCCGGCTGCTGTCTTTCAACGCG | + |
|
Preference number: 6 (lower is better) Translates to: AVCGHIDCLLIN*FRSIRLLSFNA Trigger: CGCGTTGAAAGACAGCAGCCGGATGCTGCGGAATCAGTTTATGAGGAGACAGTCAATGTGACCACAGACAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS GCA 72 bp | TGTGATCTGGGTTGTCAGGTAGATGACCACGGGAAGTaGCGAAGACAGAGCCTGAAGGCTAACGTTGTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: CDLGCQVDDHGK*RRQSLKANVVA Trigger: AGCTACAACGTTAGCCTTCAGGCTCTGTCTTCGGCACTTCCCGTGGTCATCTACCTGACAACCCAGATCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CCA 72 bp | CTCTTCCCTTCCTTTTGCTGGCATGTGGCATGTTCATaGCACGTGGCACAGACATCTACATCTTCCGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LFPSFCWHVACS*HVAQTSTSSVP Trigger: TGGCACGGAAGATGTAGATGTCTGTGCCACGTGCCATGAACATGCCACATGCCAGCAAAAGGAAGGGAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
||
| CDS TCA 72 bp | AGATGGCGTTCTGAATTTCAGGAGGGCTGCCACAGCTaGTCTCTTGGCAATGTAACTTGGGAGGTTCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: RWRSEFQEGCHS*SLGNVTWEVPT Trigger: TGTGGGAACCTCCCAAGTTACATTGCCAAGAGATCAGCTGTGGCAGCCCTCCTGAAATTCAGAACGCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
||
| CDS CAA 72 bp | TCACACTCATCGATGTCTGCACAGAAAGTGCCGTCATaGGGGATGAACGTCTCGTTGTTATTTGTGGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: SHSSMSAQKVPS*GMNVSLLFVAR Trigger: CCGGGCCACAAATAACAACGAGACGTTCATCCCCAATGACGGCACTTTCTGTGCAGACATCGATGAGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 72 bp | AGGGGCTGCAGAAATGCTTATGGTGTAATTGGTTCCTaGTTGGAGGTGCAGGCACACTTCTGGGGTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: RGCRNAYGVIGS*LEVQAHFWGSA Trigger: AGCAGAACCCCAGAAGTGTGCCTGCACCTCCAACAAGGAACCAATTACACCATAAGCATTTCTGCAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 90 bp | GCCCCAAAACCCATAGTTGCAAATGCAGATTCTCTTCCCTTCCTTTaGCTGGCATGTGGCATGTTCATGGCACGTGGCACAGACATCTAC | + |
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Preference number: 6 (lower is better) Translates to: APKPIVANADSLPFL*LACGMFMARGTDIY Trigger: GTAGATGTCTGTGCCACGTGCCATGAACATGCCACATGCCAGCAAAAGGAAGGGAAGAGAATCTGCATTTGCAACTATGGGTTTTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
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| CDS TCA 72 bp | CCTCTGACCCAGAACCTCCACTTGGTACATTTGTTCTaGTCCAACTTGCCTAGAGTGCCTGCTCAACGTCAA | + |
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Preference number: 6 (lower is better) Translates to: PLTQNLHLVHLF*SNLPRVPAQRQ Trigger: TTGACGTTGAGCAGGCACTCTAGGCAAGTTGGATCAGAACAAATGTACCAAGTGGAGGTTCTGGGTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS TCA 72 bp | GGCATATCTCAGGGTCCTGGCTGCTGCTGGTTGTATTaGAGACCATTTCCTGGACAAATGCCTTCTGATACC | + |
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Preference number: 6 (lower is better) Translates to: GISQGPGCCWLY*RPFPGQMPSDT Trigger: GGTATCAGAAGGCATTTGTCCAGGAAATGGTCTTCAATACAACCAGCAGCAGCCAGGACCCTGAGATATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | GGCACTCATCTTTGTCAACACACCGTGTCCTCCCGTTaGCCCAAAACCCATAGTTGCAAATGCAGATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GTHLCQHTVSSR*PKTHSCKCRFS Trigger: AGAGAATCTGCATTTGCAACTATGGGTTTTGGGGCAACGGGAGGACACGGTGTGTTGACAAAGATGAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040166.14 |
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| CDS GCA 72 bp | AACTGGCACTCATCTTTGTACACCGTGTCCTCCCGTTaGCCCAAAACCCATAGTTGCAAATGCAGATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: NWHSSLYTVSSR*PKTHSCKCRFS Trigger: AGAGAATCTGCATTTGCAACTATGGGTTTTGGGGCAACGGGAGGACACGGTGTACAAAGATGAGTGCCAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000107544.2 |
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| CDS CAA 90 bp | CTGGCCAGGATTTCTGCAGCCACATATCCGTCAGCAGGAGAAGTGTaGCCAAAGAATGAAGTCATGCCTTCAGAATCACAAGAAAATGTG | + |
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Preference number: 6 (lower is better) Translates to: LARISAATYPSAGEV*PKNEVMPSESQENV Trigger: CACATTTTCTTGTGATTCTGAAGGCATGACTTCATTCTTTGGCAACACTTCTCCTGCTGACGGATATGTGGCTGCAGAAATCCTGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | GCTGCTGGTTGTATTGAAGACCATTTCCTGGACAAATaGCTTCTGATACCATCTCTGGCCCCAAATGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: AAGCIEDHFLDK*LLIPSLAPNVE Trigger: TTCCACATTTGGGGCCAGAGATGGTATCAGAAGGCATTTGTCCAGGAAATGGTCTTCAATACAACCAGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 72 bp | GTACACGATCCTGGCGTTCACTCTCTCTGGACTTATTaGCCATCTCACACAGGTGTCATTAAACACCAACAC | + |
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Preference number: 6 (lower is better) Translates to: VHDPGVHSLWTY*PSHTGVIKHQH Trigger: GTGTTGGTGTTTAATGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS TCA 72 bp | GCTTTGCAAGGACAGGGGAAGGACCAACACCTGATATaGACTGATAGGTCCATTTATCTCCTTGACTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALQGQGKDQHLI*TDRSIYLLDFP Trigger: AGGAAAGTCAAGGAGATAAATGGACCTATCAGTTCATATCAGGTGTTGGTCCTTCCCCTGTCCTTGCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | TACACGATCCTGGCGTTCACTCTCTCTGGACTTATTTaGCATCTCACACAGGTGTCATTAAACACCAACACA | + |
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Preference number: 6 (lower is better) Translates to: YTILAFTLSGLI*HLTQVSLNTNT Trigger: TGTGTTGGTGTTTAATGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CCA 72 bp | GCGTATCAAGTACACGATCCTGGCGTTCACTCTCTCTaGACTTATTTGCCATCTCACACAGGTGTCATTAAA | + |
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Preference number: 6 (lower is better) Translates to: AYQVHDPGVHSL*TYLPSHTGVIK Trigger: TTTAATGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTACTTGATACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 90 bp | GCGTATCAAGTACACGATCCTGGCGTTCACTCTCTCTGGACTTATTaGCCATCTCACACAGGTGTCATTAAACACCAACACATCATGAAT | + |
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Preference number: 6 (lower is better) Translates to: AYQVHDPGVHSLWTY*PSHTGVIKHQHIMN Trigger: ATTCATGATGTGTTGGTGTTTAATGACACCTGTGTGAGATGGCAAATAAGTCCAGAGAGAGTGAACGCCAGGATCGTGTACTTGATACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS TCA 72 bp | AATGTGCTTTGCAAGGACAGGGGAAGGACCAACACCTaGTATGAACTGATAGGTCCATTTATCTCCTTGACT | + |
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Preference number: 6 (lower is better) Translates to: NVLCKDRGRTNT*YELIGPFISLT Trigger: AGTCAAGGAGATAAATGGACCTATCAGTTCATATCAGGTGTTGGTCCTTCCCCTGTCCTTGCAAAGCACATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | AGAACCTCCACTTGGTACATTTGTTCTGATCCAACTTaGCTAGAGTGCCTGCTCAACGTCAAACAAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: RTSTWYICSDPT*LECLLNVKQVS Trigger: TGAAACTTGTTTGACGTTGAGCAGGCACTCTAGGCAAGTTGGATCAGAACAAATGTACCAAGTGGAGGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | AGAATGAAGTCATGCCTTCAGAATCACAAGAAAATGTaGTTTGCAAGGACAGGGGAAGGACCAACACCTGAT | + |
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Preference number: 6 (lower is better) Translates to: RMKSCLQNHKKM*FARTGEGPTPD Trigger: ATCAGGTGTTGGTCCTTCCCCTGTCCTTGCAAAGCACATTTTCTTGTGATTCTGAAGGCATGACTTCATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 90 bp | TGGCCCCAAATGTGGAATAAATACATCTCTAGTACATCAGCTGTCTaGAGGCTGCTCCATCTCAGGCAGGTATCATTATATACCGAAATA | + |
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Preference number: 6 (lower is better) Translates to: WPQMWNKYISSTSAV*RLLHLRQVSLYTEI Trigger: TATTTCGGTATATAATGATACCTGCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACTAGAGATGTATTTATTCCACATTTGGGGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS TCA 72 bp | TGTGGAATAAATACATCTCTAGTACATCAGCTGTCTTaGGGCTGCTCCATCTCAGGCAGGTATCATTATATA | + |
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Preference number: 6 (lower is better) Translates to: CGINTSLVHQLS*GCSISGRYHYI Trigger: TATATAATGATACCTGCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACTAGAGATGTATTTATTCCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS CAA 72 bp | ATGTGGAATAAATACATCTCTAGTACATCAGCTGTCTaGAGGCTGCTCCATCTCAGGCAGGTATCATTATAT | + |
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Preference number: 6 (lower is better) Translates to: MWNKYISSTSAV*RLLHLRQVSLY Trigger: ATATAATGATACCTGCCTGAGATGGAGCAGCCTCAAGACAGCTGATGTACTAGAGATGTATTTATTCCACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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| CDS GCA 72 bp | ACTTGGTACATTTGTTCTGATCCAACTTGCCTAGAGTaGCTGCTCAACGTCAAACAAGTTTCATTAAATACT | + |
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Preference number: 6 (lower is better) Translates to: TWYICSDPTCLE*LLNVKQVSLNT Trigger: AGTATTTAATGAAACTTGTTTGACGTTGAGCAGGCACTCTAGGCAAGTTGGATCAGAACAAATGTACCAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040166.14 ENSMUST00000107544.2 |
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