Pregenerated sensors for SURF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036160Ensembl transcript IDs: ENSMUST00000047632.14, ENSMUST00000114043.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCAGGCTATGGGACAGAGAAAACAGGCACAGTGTAGACCTGGGTaGCGCAGGAGGACCTCACCTGGGTCCTCGATCAACGGGCAAAAC | + |
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Preference number: 1 (lower is better) Translates to: GQAMGQRKQAQCRPG*RRRTSPGSSINGQN Trigger: GTTTTGCCCGTTGATCGAGGACCCAGGTGAGGTCCTCCTGCGGCACCCAGGTCTACACTGTGCCTGTTTTCTCTGTCCCATAGCCTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR TCA 90 bp | TGCGCTCACGGCCACTGGGAATGCAGGTGGGCAGGAAAGAGTCGGTaGGGGTGCCTCACTGTAACCTCTATCCTGACTCCAGAGAGTTCA | + |
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Preference number: 1 (lower is better) Translates to: CAHGHWECRWAGKSR*GCLTVTSILTPESS Trigger: TGAACTCTCTGGAGTCAGGATAGAGGTTACAGTGAGGCACCCTCACCGACTCTTTCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 90 bp | GGTCTCTACGTAGCCCTGGCTGGCCTCAAACTGAAGAGATCCACCTaGCTATGCCTCCTGAGTAATGGGACTAACGGTGTGTGCCACCAC | + |
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Preference number: 1 (lower is better) Translates to: GLYVALAGLKLKRST*LCLLSNGTNGVCHH Trigger: GTGGTGGCACACACCGTTAGTCCCATTACTCAGGAGGCATAGGCAGGTGGATCTCTTCAGTTTGAGGCCAGCCAGGGCTACGTAGAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 90 bp | TGTCCCCAGGGACTAATAAATACAGAACAGGTAGCCAAGGCTTTGTaGGCTCACGGCCACTGGGAATGCAGGTGGGCAGGAAAGAGTCGG | + |
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Preference number: 1 (lower is better) Translates to: CPQGLINTEQVAKAL*AHGHWECRWAGKSR Trigger: CCGACTCTTTCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCACAAAGCCTTGGCTACCTGTTCTGTATTTATTAGTCCCTGGGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 90 bp | ACTCACAACCTCAGCCTAGCCAGCATCCCAGGAGCCACCCTGCCCTaGCTCCTTTCCTCCAAAAGCACAGACTTATCTTTGGGTTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: THNLSLASIPGATLP*LLSSKSTDLSLGFY Trigger: ATAGAAACCCAAAGATAAGTCTGTGCTTTTGGAGGAAAGGAGGCAGGGCAGGGTGGCTCCTGGGATGCTGGCTAGGCTGAGGTTGTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 90 bp | GGACCTCACCTGGGTCCTCGATCAACGGGCAAAACCGGTTACAGGTaGAAAGGAGTTGGCACAGATGACAAACAAATACGAACACATGGG | + |
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Preference number: 1 (lower is better) Translates to: GPHLGPRSTGKTGYR*KGVGTDDKQIRTHG Trigger: CCCATGTGTTCGTATTTGTTTGTCATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGACCCAGGTGAGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 90 bp | AAGTCTCAGCCACCAATTGGCTCACAGGTGAGCAAGCATATCCTGTaGACTCAGGAAGGACTCCAGGTTTTGAGCTGGATGCCAACACAA | + |
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Preference number: 1 (lower is better) Translates to: KSQPPIGSQVSKHIL*TQEGLQVLSWMPTQ Trigger: TTGTGTTGGCATCCAGCTCAAAACCTGGAGTCCTTCCTGAGTCCACAGGATATGCTTGCTCACCTGTGAGCCAATTGGTGGCTGAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 90 bp | GACATAAAACTAGGCAACATACAACCCCAAGTCTCAGCCACCAATTaGCTCACAGGTGAGCAAGCATATCCTGTGGACTCAGGAAGGACT | + |
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Preference number: 1 (lower is better) Translates to: DIKLGNIQPQVSATN*LTGEQAYPVDSGRT Trigger: AGTCCTTCCTGAGTCCACAGGATATGCTTGCTCACCTGTGAGCCAATTGGTGGCTGAGACTTGGGGTTGTATGTTGCCTAGTTTTATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 90 bp | ATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTaGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATG | + |
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Preference number: 1 (lower is better) Translates to: IGKLGDTSARYNEVT*KLNDSYSSAGITAM Trigger: CATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| 3UTR CCA 90 bp | AAGGAGTTGGCACAGATGACAAACAAATACGAACACATGGGAGTGTaGTATCTGAATGTAATTTGTCAAATCGAGCATCAAACTTTTAAT | + |
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Preference number: 1 (lower is better) Translates to: KELAQMTNKYEHMGV*YLNVICQIEHQTFN Trigger: ATTAAAAGTTTGATGCTCGATTTGACAAATTACATTCAGATACCACACTCCCATGTGTTCGTATTTGTTTGTCATCTGTGCCAACTCCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGCTTGAGGGAGAGAAGGGTTACGTCACCAAGGGAACCAGGACAGGAATGCGCTCACGGCCACTaGGAATGCAGGTGGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSSLRERRVTSPREPGQECAHGH*ECRWAG Trigger: TCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCA...TTCCTGTCCTGGTTCCCTTGGTGACGTAACCCTTCTCTCCCTCAAGCTGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CCA 90 bp | GTCCTCGATCAACGGGCAAAACCGGTTACAGGTGGAAAGGAGTTGGCACAGATGTCTGACCCGGGAGGGTaGCTCTGCACCTATGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: VLDQRAKPVTGGKELAQMSDPGG*LCTYVW Trigger: CCAGACATAGGTGCAGAGCCACCCTCCCGGGTCAGA...CATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CAA 90 bp | TGGGGTGCAAGAACTGTGTTGACCTCACACAGGAGACCCAGTCTGTaGCCTAGACCTGCACTAGCACCACATACCATCCCAACCCTCAAG | + |
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Preference number: 2 (lower is better) Translates to: WGARTVLTSHRRPSL*PRPALAPHTIPTLK Trigger: CTTGAGGGTTGGGATGGTATGTGGTGCTAGTGCAGGTCTAGGCAACAGACTGGGTCTCCTGTGTGAGGTCAACACAGTTCTTGCACCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CAA 90 bp | CTCTGTCCCCAGGGACTAATAAATACAGAACAGGTAGCCAAGGCTTaGTGCGCTCACGGCCACTGGGAATGCAGGTGGGCAGGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: LCPQGLINTEQVAKA*CAHGHWECRWAGKS Trigger: ACTCTTTCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCACAAAGCCTTGGCTACCTGTTCTGTATTTATTAGTCCCTGGGGACAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR GCA 90 bp | AGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACCACGGCCACTGGGAATaGAGGTGGGCAGGAAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: RRLRKGLLARLWDRENRHHGHWE*RWAGKS Trigger: ACTCTTTCCTGCCCACCTGCATTCCCAGTGGCCGTG...GTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR GCA 90 bp | CTCACCTGGGTCCTCGATCAACGGGCAAAACCGGTTACAGGTGGAAAGGAGTTGGGGACTAACGGTGTGTaGCACCACACACAACAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LTWVLDQRAKPVTGGKELGTNGV*HHTQQA Trigger: TGCTTGTTGTGTGTGGTGGCACACACCGTTAGTCCC...CAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGACCCAGGTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR GCA 90 bp | GTCCTCGATCAACGGGCAAAACCGGTTACAGGTGGAAAGGAGTTGGCACAGATGAGCGCACAACAGGCTTaGCCACAGAACAAGGTAGTG | + |
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Preference number: 2 (lower is better) Translates to: VLDQRAKPVTGGKELAQMSAQQA*PQNKVV Trigger: CACTACCTTGTTCTGTGGGCAAGCCTGTTGTGCGCT...CATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTCTCTTCTCTGACAAGTCCAGCTTGTGTCAAACTGACATAAAACTAGGCATGGAGGGAAGGGGCTaGGCCAGGAACTTGGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: RPLFSDKSSLCQTDIKLGMEGRG*ARNLAG Trigger: ACCTGCCAAGTTCCTGGCTCAGCCCCTTCCCTCCAT...GCCTAGTTTTATGTCAGTTTGACACAAGCTGGACTTGTCAGAGAAGAGAGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CCA 90 bp | AAAAGCAGCTTGAGGGAGAGAAGGGTTACGTCACCAAGGGAACCAGGACAGGAAAGCAAGCATATCCTGTaGACTCAGGAAGGACTCCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSLRERRVTSPREPGQESKHIL*TQEGLQ Trigger: CTGGAGTCCTTCCTGAGTCCACAGGATATGCTTGCT...TTCCTGTCCTGGTTCCCTTGGTGACGTAACCCTTCTCTCCCTCAAGCTGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CCA 90 bp | CAAAACAACATGACCAAAAGCAGCTTGAGGGAGAGAAGGGTTACGTCACCAAGGGTCTCAGCCACCAATTaGCTCACAGGTGAGCAAGCA | + |
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Preference number: 2 (lower is better) Translates to: QNNMTKSSLRERRVTSPRVSATN*LTGEQA Trigger: TGCTTGCTCACCTGTGAGCCAATTGGTGGCTGAGAC...CCTTGGTGACGTAACCCTTCTCTCCCTCAAGCTGCTTTTGGTCATGTTGTTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR TCA 90 bp | GGTCCTCGATCAACGGGCAAAACCGGTTACAGGTGGAAAGGAGTTGGCACAGATAATAGGGAAGTTAGGTaGCACATCAGCAAGGTACAA | + |
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Preference number: 2 (lower is better) Translates to: GPRSTGKTGYRWKGVGTDNREVR*HISKVQ Trigger: TTGTACCTTGCTGATGTGTCACCTAACTTCCCTATT...ATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR TCA 90 bp | ATACGAACACATGGGAGTGTGGTATCTGAATGTAATTTGTCAAATCGAGCATCAAGTGGAGCTCACAGCTaGGGCCTCTCTTCTCTGACA | + |
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Preference number: 2 (lower is better) Translates to: IRTHGSVVSECNLSNRASSGAHS*GLSSLT Trigger: TGTCAGAGAAGAGAGGCCTCAGCTGTGAGCTCCACT...TGATGCTCGATTTGACAAATTACATTCAGATACCACACTCCCATGTGTTCGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTGGACTATGGTTGTGGGGTaGAAGAACTGTGTTGACCTC | + |
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Preference number: 2 (lower is better) Translates to: KKIGKLGDTSARYNEVTWTMVVG*KNCVDL Trigger: GAGGTCAACACAGTTCTTGCACCCCACAACCATAGT...CCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | AGCCCACCCCTGCACCCAAGCTCTGACCCGGGAGGGTaGCTCTGCACCTATGTCTGGCCATTCCTGTCACCT | + |
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Preference number: 3 (lower is better) Translates to: SPPLHPSSDPGG*LCTYVWPFLSP Trigger: AGGTGACAGGAATGGCCAGACATAGGTGCAGAGCCACCCTCCCGGGTCAGAGCTTGGGTGCAGGGGTGGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR TCA 72 bp | GGCCACTGGGAATGCAGGTGGGCAGGAAAGAGTCGGTaGGGGTGCCTCACTGTAACCTCTATCCTGACTCCA | + |
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Preference number: 3 (lower is better) Translates to: GHWECRWAGKSR*GCLTVTSILTP Trigger: TGGAGTCAGGATAGAGGTTACAGTGAGGCACCCTCACCGACTCTTTCCTGCCCACCTGCATTCCCAGTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 72 bp | ATGGGACAGAGAAAACAGGCACAGTGTAGACCTGGGTaGCGCAGGAGGACCTCACCTGGGTCCTCGATCAAC | + |
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Preference number: 3 (lower is better) Translates to: MGQRKQAQCRPG*RRRTSPGSSIN Trigger: GTTGATCGAGGACCCAGGTGAGGTCCTCCTGCGGCACCCAGGTCTACACTGTGCCTGTTTTCTCTGTCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | ATCCTGTGGACTCAGGAAGGACTCCAGGTTTTGAGCTaGATGCCAACACAAAGACAGCCCCGGAGCTCTGGC | + |
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Preference number: 3 (lower is better) Translates to: ILWTQEGLQVLS*MPTQRQPRSSG Trigger: GCCAGAGCTCCGGGGCTGTCTTTGTGTTGGCATCCAGCTCAAAACCTGGAGTCCTTCCTGAGTCCACAGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR TCA 72 bp | AGCATATCCTGTGGACTCAGGAAGGACTCCAGGTTTTaGGCTGGATGCCAACACAAAGACAGCCCCGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SISCGLRKDSRF*AGCQHKDSPGA Trigger: AGCTCCGGGGCTGTCTTTGTGTTGGCATCCAGCTCAAAACCTGGAGTCCTTCCTGAGTCCACAGGATATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR TCA 72 bp | ACAACCCCAAGTCTCAGCCACCAATTGGCTCACAGGTaGGCAAGCATATCCTGTGGACTCAGGAAGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: TTPSLSHQLAHR*ASISCGLRKDS Trigger: GGAGTCCTTCCTGAGTCCACAGGATATGCTTGCTCACCTGTGAGCCAATTGGTGGCTGAGACTTGGGGTTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 72 bp | GGACTAATAAATACAGAACAGGTAGCCAAGGCTTTGTaGGCTCACGGCCACTGGGAATGCAGGTGGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: GLINTEQVAKAL*AHGHWECRWAG Trigger: TCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCACAAAGCCTTGGCTACCTGTTCTGTATTTATTAGTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CAA 90 bp | AAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACAGTGTAGACCTAGGAGACCCAGTCTGTaGCCTAGACCTGCACTAGCA | + |
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Preference number: 3 (lower is better) Translates to: KGPFGQAMGQRKQAQCRPRRPSL*PRPALA Trigger: TGCTAGTGCAGGTCTAGGCAACAGACTGGGTCTCCT...AGGTCTACACTGTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 72 bp | AGGCACACAGTCAGAGATCTCACTATGGTTGTGGGGTaGAAGAACTGTGTTGACCTCACACAGGAGACCCAG | + |
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Preference number: 3 (lower is better) Translates to: RHTVRDLTMVVG*KNCVDLTQETQ Trigger: CTGGGTCTCCTGTGTGAGGTCAACACAGTTCTTGCACCCCACAACCATAGTGAGATCTCTGACTGTGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | CCACCAATTGGCTCACAGGTGAGCAAGCATATCCTGTaGACTCAGGAAGGACTCCAGGTTTTGAGCTGGATG | + |
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Preference number: 3 (lower is better) Translates to: PPIGSQVSKHIL*TQEGLQVLSWM Trigger: CATCCAGCTCAAAACCTGGAGTCCTTCCTGAGTCCACAGGATATGCTTGCTCACCTGTGAGCCAATTGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | GAGAGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATaGGACAGAGAAAACAGGCACAGTGTAGACCTGGGT | + |
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Preference number: 3 (lower is better) Translates to: ERRLRKGLLARL*DRENRHSVDLG Trigger: ACCCAGGTCTACACTGTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | CAACCAGGCACACAGTCAGAGATCTCACTATGGTTGTaGGGTGCAAGAACTGTGTTGACCTCACACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QPGTQSEISLWL*GARTVLTSHRR Trigger: TCTCCTGTGTGAGGTCAACACAGTTCTTGCACCCCACAACCATAGTGAGATCTCTGACTGTGTGCCTGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | CTGGGTCCTCGATCAACGGGCAAAACCGGTTACAGGTaGAAAGGAGTTGGCACAGATGACAAACAAATACGA | + |
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Preference number: 3 (lower is better) Translates to: LGPRSTGKTGYR*KGVGTDDKQIR Trigger: TCGTATTTGTTTGTCATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR-3UTR CAA 90 bp | CAGCCTTTAGTAATTACAAATGACCCCAGCCCTACCAGCCCACCCCTGCACCCAAGCACAGACTTATCTTaGGGTTTCTATTGCTGTGAT | + |
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Preference number: 3 (lower is better) Translates to: QPLVITNDPSPTSPPLHPSTDLS*GFYCCD Trigger: ATCACAGCAATAGAAACCCAAAGATAAGTCTGTGCT...TGGGTGCAGGGGTGGGCTGGTAGGGCTGGGGTCATTTGTAATTACTAAAGGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | ATGAAACAACCAGGCACACAGTCAGAGATCTCACTATaGTTGTGGGGTGCAAGAACTGTGTTGACCTCACAC | + |
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Preference number: 3 (lower is better) Translates to: MKQPGTQSEISL*LWGARTVLTSH Trigger: GTGTGAGGTCAACACAGTTCTTGCACCCCACAACCATAGTGAGATCTCTGACTGTGTGCCTGGTTGTTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR TCA 72 bp | CAAAACCGGTTACAGGTGGAAAGGAGTTGGCACAGATaGCAAACAAATACGAACACATGGGAGTGTGGTATC | + |
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Preference number: 3 (lower is better) Translates to: QNRLQVERSWHR*QTNTNTWECGI Trigger: GATACCACACTCCCATGTGTTCGTATTTGTTTGTCATCTGTGCCAACTCCTTTCCACCTGTAACCGGTTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CCA 72 bp | TTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTaGAAGCTTAATGACTCTTACTCCAGTGCTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: LGDTSARYNEVT*KLNDSYSSAGI Trigger: AATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| 3UTR-3UTR CAA 90 bp | ATACGAACACATGGGAGTGTGGTATCTGAATGTAATTTGTCAAATCGAGCATCAGAAGGACTCCAGGTTTaGAGCTGGATGCCAACACAA | + |
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Preference number: 3 (lower is better) Translates to: IRTHGSVVSECNLSNRASEGLQV*SWMPTQ Trigger: TTGTGTTGGCATCCAGCTCAAAACCTGGAGTCCTTC...TGATGCTCGATTTGACAAATTACATTCAGATACCACACTCCCATGTGTTCGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR GCA 72 bp | AATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTaGCAACACTTCTATCTAGATCTGTGTTTTGTTATT | + |
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Preference number: 3 (lower is better) Translates to: NDSYSSAGITAM*QHFYLDLCFVI Trigger: AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS-3UTR CCA 90 bp | GGCTTTGTGCGCTCACGGCCACTGGGAATGCAGGTGGGCAGGAAAGAGTCGGTGTGGCCCCGGGCCAGCTaGATCTTTTCATGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: GFVRSRPLGMQVGRKESVWPRAS*IFSCSR Trigger: GCGGCTGCATGAAAAGATCCAGCTGGCCCGGGGCCA...CACCGACTCTTTCCTGCCCACCTGCATTCCCAGTGGCCGTGAGCGCACAAAGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR GCA 90 bp | GTTAAAAGTAGCCCTATCTCCACTCACAACCTCAGCCTAGCCAGCATCCCAGGATCGTCCAGGCGGCCCTaGCGTGCCTGCAGACGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKSSPISTHNLSLASIPGSSRRP*RACRRS Trigger: GGACCGTCTGCAGGCACGGCAGGGCCGCCTGGACGA...TCCTGGGATGCTGGCTAGGCTGAGGTTGTGAGTGGAGATAGGGCTACTTTTAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR TCA 90 bp | CTGGATGCCAACACAAAGACAGCCCCGGAGCTCTGGCACAGAGACATACCCGACGGCGTTCGTCATCCCTaGTCTTCACACCCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LDANTKTAPELWHRDIPDGVRHP*SSHPQP Trigger: AGGCTGAGGGTGTGAAGATCAGGGATGACGAACGCC...GTCGGGTATGTCTCTGTGCCAGAGCTCCGGGGCTGTCTTTGTGTTGGCATCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR GCA 90 bp | GTTAAAAGTAGCCCTATCTCCACTCACAACCTCAGCCTAGCCAGCATCCCAGGACGGCCCTGCCGTGCCTaGAGACGGTCCAACAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: VKSSPISTHNLSLASIPGRPCRA*RRSNSC Trigger: GCAGCTGTTGGACCGTCTGCAGGCACGGCAGGGCCG...TCCTGGGATGCTGGCTAGGCTGAGGTTGTGAGTGGAGATAGGGCTACTTTTAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CCA 90 bp | AGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACTCCTTGGTGCTACCCTaGCCCCGGGCCAGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: RRLRKGLLARLWDRENRHSLVLP*PRASWI Trigger: GATCCAGCTGGCCCGGGGCCAGGGTAGCACCAAGGA...GTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CCA 90 bp | GTTAAAAGTAGCCCTATCTCCACTCACAACCTCAGCCTAGCCAGCATCCCAGGAACCCGGCCCTTCTTGTaGGCCTTCTGTAGCCGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSSPISTHNLSLASIPGTRPFL*AFCSRR Trigger: GCGACGGCTACAGAAGGCCCACAAGAAGGGCCGGGT...TCCTGGGATGCTGGCTAGGCTGAGGTTGTGAGTGGAGATAGGGCTACTTTTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR CCA 90 bp | ATGAAACAACCAGGCACACAGTCAGAGATCTCACTATGGTTGTGGGGTGCAAGAGCACGCTCCAGGTCCTaGGGAAGCACCCGGCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MKQPGTQSEISLWLWGARARSRS*GSTRPF Trigger: GAAGGGCCGGGTGCTTCCCCAGGACCTGGAGCGTGC...TCTTGCACCCCACAACCATAGTGAGATCTCTGACTGTGTGCCTGGTTGTTTCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR TCA 90 bp | GACCAAAAGCAGCTTGAGGGAGAGAAGGGTTACGTCACCAAGGGAACCAGGACAGGCGCCAGCAGCTTCTaGGCCTTTTGTTCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: DQKQLEGEKGYVTKGTRTGASSF*AFCSDT Trigger: GGTGTCAGAACAAAAGGCTCAGAAGCTGCTGGCGCC...TGTCCTGGTTCCCTTGGTGACGTAACCCTTCTCTCCCTCAAGCTGCTTTTGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | AGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACCGCTTCAGGGCTTCCTaGAGCAGGCGTTCGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RRLRKGLLARLWDRENRHRFRAS*SRRSSS Trigger: GGATGACGAACGCCTGCTGCAGGAAGCCCTGAAGCG...GTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTTAAACAACCCAGGACCACCAGTCCAGGGGTAGCACTGTCCAAAATGCTTGCGCTGCCGCTGTaGCCGGCGCTTCTCTTTGCG | + |
|
Preference number: 4 (lower is better) Translates to: YFLKQPRTTSPGVALSKMLALPL*PALLFA Trigger: CGCAAAGAGAAGCGCCGGGCACAGCGGCAGCGCAAG...CATTTTGGACAGTGCTACCCCTGGACTGGTGGTCCTGGGTTGTTTAAGAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR CCA 90 bp | AGAGAAGGGTTACGTCACCAAGGGAACCAGGACAGGAACCTAGAGGCAGGAAGTCTGGGCCTTGCTGGCTaGCTCCTCTTCAGTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: REGLRHQGNQDRNLEAGSLGLAG*LLFSHF Trigger: GAAGTGACTGAAGAGGAGCCAGCCAGCAAGGCCCAG...ACTTCCTGCCTCTAGGTTCCTGTCCTGGTTCCCTTGGTGACGTAACCCTTCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| 3UTR CAA 72 bp | CAGGGACTAATAAATACAGAACAGGTAGCCAAGGCTTaGTGCGCTCACGGCCACTGGGAATGCAGGTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLINTEQVAKA*CAHGHWECRWA Trigger: TGCCCACCTGCATTCCCAGTGGCCGTGAGCGCACAAAGCCTTGGCTACCTGTTCTGTATTTATTAGTCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| 3UTR CAA 72 bp | AAGCATATCCTGTGGACTCAGGAAGGACTCCAGGTTTaGAGCTGGATGCCAACACAAAGACAGCCCCGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KHILWTQEGLQV*SWMPTQRQPRS Trigger: GCTCCGGGGCTGTCTTTGTGTTGGCATCCAGCTCAAAACCTGGAGTCCTTCCTGAGTCCACAGGATATGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| 3UTR CAA 72 bp | AGAACTGTGTTGACCTCACACAGGAGACCCAGTCTGTaGCCTAGACCTGCACTAGCACCACATACCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTVLTSHRRPSL*PRPALAPHTIP Trigger: TGGGATGGTATGTGGTGCTAGTGCAGGTCTAGGCAACAGACTGGGTCTCCTGTGTGAGGTCAACACAGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR GCA 90 bp | TTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTGCCCCCGGCGCTTCTCTTTaGGCTTCAGGGCTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLMTLTPVLGLQQCAPGASL*ASGLPA Trigger: TGCAGGAAGCCCTGAAGCGCAAAGAGAAGCGCCGGG...GGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR CCA 90 bp | CCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTGCCAACTCCCGTGCTGTGCCTTaGCTATCTTTAGGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PGSLMTLTPVLGLQQCANSRAVP*LSLGDP Trigger: GGGGTCCCCTAAAGATAGCCAAGGCACAGCACGGGA...GTTGGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTCCTTGGTGCTACCCTaGCCCCGGGCCAGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: QKKIGKLGDTSARYNEVTSLVLP*PRASWI Trigger: GATCCAGCTGGCCCGGGGCCAGGGTAGCACCAAGGA...GGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR TCA 90 bp | CTCACCTGGGTCCTCGATCAACGGGCAAAACCGGTTACAGGTGGAAAGGAGTTGAGGGCTTTAGTCTTGTaGTCCATAGCTTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTWVLDQRAKPVTGGKELRALVL*SIAFCS Trigger: GGAACAGAAAGCTATGGATCACAAGACTAAAGCCCT...CAACTCCTTTCCACCTGTAACCGGTTTTGCCCGTTGATCGAGGACCCAGGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | CTGGAGGACACGGTCCTTCTTAAAGATGCTGATGAAACAACCAGGCACACAGTCATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LEDTVLLKDADETTRHTVISPDS*SSLQAI Trigger: AATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGAT...GACTGTGTGCCTGGTTGTTTCATCAGCATCTTTAAGAAGGACCGTGTCCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | ACAATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGGCCTCTTCTCCTTCTTaGGCTGGGCCTTGCTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TMRLPGSLMTLTPVLGLQASSPS*AGPCWL Trigger: CAGCCAGCAAGGCCCAGCGCAAGAAGGAGAAGAGGC...CTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | CCGGTTACAGGTGGAAAGGAGTTGGCACAGATGACAAACAAATACGAACACATGCTCCTGGGCCTTGGCTaGATCCTGATCACGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVTGGKELAQMTNKYEHMLLGLG*ILITKL Trigger: GAGCTTCGTGATCAGGATGCAGCCAAGGCCCAGGAG...CATGTGTTCGTATTTGTTTGTCATCTGTGCCAACTCCTTTCCACCTGTAACCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR CCA 90 bp | TTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTGCCTCCCGTGCTGTGCCTTaGCTATCTTTAGGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLMTLTPVLGLQQCASRAVP*LSLGDP Trigger: GGGGTCCCCTAAAGATAGCCAAGGCACAGCACGGGA...GGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | ACAATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGTTCTTGCGCAGGTTCTaGCGCCGCTTGTCCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: TMRLPGSLMTLTPVLGLQFLRRF*RRLSCR Trigger: GCGACAGGACAAGCGGCGCCAGAACCTGCGCAAGAA...CTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAAGGCGCCAGCAGCTTCTaGGCCTTTTGTTCTGACACC | + |
|
Preference number: 4 (lower is better) Translates to: MRLPGSLMTLTPVLGLQQGASSF*AFCSDT Trigger: GGTGTCAGAACAAAAGGCTCAGAAGCTGCTGGCGCC...TTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS-3UTR GCA 90 bp | TTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACAGTGTATCGCAGAAAATCCAGTaGAAAGACAGACTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LRKGLLARLWDRENRHSVSQKIQ*KDRLPC Trigger: GCACGGGAGTCTGTCTTTGCACTGGATTTTCTGCGA...TACACTGTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | TTACGTCACCAAGGGAACCAGGACAGGAACCTAGAGGCAGGAAGTAAAGCAAAAATTCCTGCAGCTCCTTaGAGGCCATTTTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRHQGNQDRNLEAGSKAKIPAAP*RPFWGS Trigger: TGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAAT...TTTTGCTTTACTTCCTGCCTCTAGGTTCCTGTCCTGGTTCCCTTGGTGACGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR GCA 90 bp | CAGAAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTCTTGCGCTGGGCCTTaGTGGCTGGCTCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKKIGKLGDTSARYNEVTSCAGP*WLAPLQ Trigger: CTGAAGAGGAGCCAGCCAGCAAGGCCCAGCGCAAGA...GGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CCA 90 bp | AAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTGGTGCGCTGGGCCTTGCTaGCTGGCTCCTCTTCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KKIGKLGDTSARYNEVTWCAGPC*LAPLQS Trigger: TGACTGAAGAGGAGCCAGCCAGCAAGGCCCAGCGCA...CCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| 3UTR CAA 72 bp | AAACAACCAGGCACACAGTCAGAGATCTCACTATGGTaGTGGGGTGCAAGAACTGTGTTGACCTCACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQPGTQSEISLW*WGARTVLTSHR Trigger: CCTGTGTGAGGTCAACACAGTTCTTGCACCCCACAACCATAGTGAGATCTCTGACTGTGTGCCTGGTTGTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTTAAACAACCCAGGACCACCAGTCCAGGGGTAGCACTGTCCAAAATGTTCCGTTCCCTCTCCTaGTTTCTCCGCTGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: YFLKQPRTTSPGVALSKMFRSLS*FLRCLF Trigger: GAAAAGACAGCGGAGAAAGCAGGAGAGGGAACGGAA...CATTTTGGACAGTGCTACCCCTGGACTGGTGGTCCTGGGTTGTTTAAGAAAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CCA 90 bp | AGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACAGCCCTTCTCTTGTTTaGATACCATTGGGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRLRKGLLARLWDRENRHSPSLV*IPLGSW Trigger: CCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCT...GTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CCA 90 bp | ACAATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGGGGGGTCACCTCTACTaGCTCCTCCTTTTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TMRLPGSLMTLTPVLGLQGGHLY*LLLFLS Trigger: GCTGAGAAAAAGGAGGAGCCAGTAGAGGTGACCCCC...CTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | TACTTTCTTAAACAACCCAGGACCACCAGTCCAGGGGTAGCACTGTCCAAAATGCTTTTTCTCAGCCTCTaGAACCTGCTGCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: YFLKQPRTTSPGVALSKMLFLSL*NLLLCL Trigger: CAAGCAAAGCAGCAGGTTGCAGAGGCTGAGAAAAAG...CATTTTGGACAGTGCTACCCCTGGACTGGTGGTCCTGGGTTGTTTAAGAAAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR GCA 90 bp | ATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAAATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: MRLPGSLMTLTPVLGLQQISPDS*SSLQAI Trigger: AATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGAT...TTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | AAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTGGCCTTGCAGGCCATTTTaGGGGTCACCTCTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKIGKLGDTSARYNEVTWPCRPF*GSPLLA Trigger: AGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGG...CCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | CAGAAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCCCTTGCAGGCCATTTTaGGGGTCACCTCTACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QKKIGKLGDTSARYNEVTPCRPF*GSPLLA Trigger: AGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGG...GGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTTTCTCCTTCTTGCGCTaGGCCTTGCTGGCTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVIFSFLR*ALLAGS Trigger: GGAGCCAGCCAGCAAGGCCCAGCGCAAGAAGGAGAA...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAAGTTAAAGATCAGCCCTaGTTCCTGCAGCTCCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MRLPGSLMTLTPVLGLQQVKDQP*FLQLLA Trigger: TGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAAC...TTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | TTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTGCCCTTTTTCTCAGCCTCTaGAACCTGCTGCTTTGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPGSLMTLTPVLGLQQCALFLSL*NLLLCL Trigger: CAAGCAAAGCAGCAGGTTGCAGAGGCTGAGAAAAAG...GGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | TACAATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACATTGTCCTGTCGCTGCTaGATCTTCTCCACCACATGC | + |
|
Preference number: 4 (lower is better) Translates to: YNEVTWKLNDSYSSAGITLSCRC*IFSTTC Trigger: GCATGTGGTGGAGAAGATGCAGCAGCGACAGGACAA...TGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | TTACGTCACCAAGGGAACCAGGACAGGAACCTAGAGGCAGGAAGTAAAGCAAAAATAGCTTTCTGTTCCTaGTCCGGAGACTTCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRHQGNQDRNLEAGSKAKIAFCS*SGDFFC Trigger: ACAAAAGAAGTCTCCGGAGCAGGAACAGAAAGCTAT...TTTTGCTTTACTTCCTGCCTCTAGGTTCCTGTCCTGGTTCCCTTGGTGACGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAAAGCTGGATCTTTTCATaGAGCCGCTGTCGCAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: MRLPGSLMTLTPVLGLQQSWIFS*SRCRRK Trigger: TTTTCTGCGACAGCGGCTGCATGAAAAGATCCAGCT...TTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | AAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTGGTTCCGTTCCCTCTCCTaGTTTCTCCGCTGTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KKIGKLGDTSARYNEVTWFRSLS*FLRCLF Trigger: GAAAAGACAGCGGAGAAAGCAGGAGAGGGAACGGAA...CCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTGGGGGTCACCTCTACTaGCTCCTCCTTTTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVIGGHLY*LLLFLS Trigger: GCTGAGAAAAAGGAGGAGCCAGTAGAGGTGACCCCC...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTATTCCTGCAGCTCCTTaGAGGCCATTTTGGGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVIIPAAP*RPFWGS Trigger: TGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAAT...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR CCA 90 bp | ACAATGAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGAGCCCTTCTCTTGTTTaGATACCATTGGGTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TMRLPGSLMTLTPVLGLQSPSLV*IPLGSW Trigger: CCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCT...CTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| 3UTR CAA 72 bp | TCACAGCTGAGGCCTCTCTTCTCTGACAAGTCCAGCTaGTGTCAAACTGACATAAAACTAGGCAACATACAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLRPLFSDKSS*CQTDIKLGNIQ Trigger: TTGTATGTTGCCTAGTTTTATGTCAGTTTGACACAAGCTGGACTTGTCAGAGAAGAGAGGCCTCAGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTTCGCAGAAAATCCAGTaGAAAGACAGACTCCCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVISQKIQ*KDRLPC Trigger: GCACGGGAGTCTGTCTTTGCACTGGATTTTCTGCGA...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | AGCATCAAACTTTTAATACAGAAGAAAATAGGGAAGTTAGGTGACACATCAGCACGCTTGTCCTGTCGCTaGTGCATCTTCTCCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: SIKLLIQKKIGKLGDTSARLSCR*CIFSTT Trigger: TGTGGTGGAGAAGATGCAGCAGCGACAGGACAAGCG...TGCTGATGTGTCACCTAACTTCCCTATTTTCTTCTGTATTAAAAGTTTGATGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTAGGGCTTTAGTCTTGTaGTCCATAGCTTTCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVIRALVL*SIAFCS Trigger: GGAACAGAAAGCTATGGATCACAAGACTAAAGCCCT...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTACAGCAATGTGCCAACACTTCTATCTAGATCTGTGTTTTGTTATTATAGCTTTCTGTTCCTaGTCCGGAGACTTCTTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AGITAMCQHFYLDLCFVIIAFCS*SGDFFC Trigger: ACAAAAGAAGTCTCCGGAGCAGGAACAGAAAGCTAT...AATAACAAAACACAGATCTAGATAGAAGTGTTGGCACATTGCTGTAATCCCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 90 bp | CTTGGCTGCATCCTGATCACGAAGCTCGTCCAGGCGGCCCTGCCGTaGCTGCAGACGGTCCAACAGCTGCCTGTAGTTCCTGCCTGTGAG | + |
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Preference number: 5 (lower is better) Translates to: LGCILITKLVQAALP*LQTVQQLPVVPACE Trigger: CTCACAGGCAGGAACTACAGGCAGCTGTTGGACCGTCTGCAGGCACGGCAGGGCCGCCTGGACGAGCTTCGTGATCAGGATGCAGCCAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 90 bp | TGTGGGCCTTCTGTAGCCGTCGCTCAGCCCGAGCTGCCTTCTTCTTaGGCAGGTTCTGGCGCCGCTTGTCCTGTCGCTGCTGCATCTTCT | + |
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Preference number: 5 (lower is better) Translates to: CGPSVAVAQPELPSS*AGSGAACPVAAASS Trigger: AGAAGATGCAGCAGCGACAGGACAAGCGGCGCCAGAACCTGCGCAAGAAGAAGGCAGCTCGGGCTGAGCGACGGCTACAGAAGGCCCACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 90 bp | GGGGTCACCTCTACTGGCTCCTCCTTTTTCTCAGCCTCTGCAACCTaGTGCTTTGCTTGGCGCTCCTTCCTCTTCCTCTTCTTCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: GVTSTGSSFFSASAT*CFAWRSFLFLFFRS Trigger: GGAACGGAAGAAGAGGAAGAGGAAGGAGCGCCAAGCAAAGCAGCAGGTTGCAGAGGCTGAGAAAAAGGAGGAGCCAGTAGAGGTGACCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CCA 90 bp | ATGTGCTCCTCTGTCGTTCAGGGCCAGGCTGCGCGCAGATCTTCTTaGCCAAGTCCTGAAGATAGGTATCCTTGGCCAGGAGAGAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: MCSSVVQGQAARRSS*PSPEDRYPWPGEKP Trigger: TGGCTTCTCTCCTGGCCAAGGATACCTATCTTCAGGACTTGGCCAAGAAGATCTGCGCGCAGCCTGGCCCTGAACGACAGAGGAGCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS-3UTR CAA 90 bp | AGAGAAGGGTTACGTCACCAAGGGAACCAGGACAGGAACCTAGAGGCAGGAAGTCTCCCGTGCTGTGCCTaGGCTATCTTTAGGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: REGLRHQGNQDRNLEAGSLPCCA*AIFRGP Trigger: GGGTCCCCTAAAGATAGCCAAGGCACAGCACGGGAG...ACTTCCTGCCTCTAGGTTCCTGTCCTGGTTCCCTTGGTGACGTAACCCTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | AGGAGATTGAGAAAGGGCCTTTTGGCCAGGCTATGGGACAGAGAAAACAGGCACTGCCTCTTCTCCTTCTaGCGCTGGGCCTTGCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: RRLRKGLLARLWDRENRHCLFSF*RWALLA Trigger: AGCCAGCAAGGCCCAGCGCAAGAAGGAGAAGAGGCA...GTGCCTGTTTTCTCTGTCCCATAGCCTGGCCAAAAGGCCCTTTCTCAATCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | TACTTTCTTAAACAACCCAGGACCACCAGTCCAGGGGTAGCACTGTCCAAAATGGCCCGGCGCTTCTCTTaGCGCTTCAGGGCTTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: YFLKQPRTTSPGVALSKMARRFS*RFRASC Trigger: GCAGGAAGCCCTGAAGCGCAAAGAGAAGCGCCGGGC...CATTTTGGACAGTGCTACCCCTGGACTGGTGGTCCTGGGTTGTTTAAGAAAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | GAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGGAACGCTTCTCCCACTaGCGCTGCCGCTGTGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: EVTWKLNDSYSSAGITAMERFSH*RCRCAR Trigger: CCGGGCACAGCGGCAGCGCAAGTGGGAGAAGCGTTC...CATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | GAGGTTACCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGGCAGCAGACAACTCCTaGGTGCTACCCTGGCCCCGG | + |
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Preference number: 5 (lower is better) Translates to: EVTWKLNDSYSSAGITAMAADNS*VLPWPR Trigger: CCGGGGCCAGGGTAGCACCAAGGAGTTGTCTGCTGC...CATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGGTAACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 90 bp | TCCTCTTCAGTCACTTCCACCTTGTTAAAGATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATTTTGGGGGTCACCTCTACTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: SSSVTSTLLKISPDS*SSLQAILGVTSTGS Trigger: GGAGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGTGGAAGTGACTGAAGAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | CCTGGAAGCTTAATGACTCTTACTCCAGTGCTGGGATTACAGCAATGTGCCAACCTCCCGTGCTGTGCCTaGGCTATCTTTAGGGGACCC | + |
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Preference number: 5 (lower is better) Translates to: PGSLMTLTPVLGLQQCANLPCCA*AIFRGP Trigger: GGGTCCCCTAAAGATAGCCAAGGCACAGCACGGGAG...GTTGGCACATTGCTGTAATCCCAGCACTGGAGTAAGAGTCATTAAGCTTCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS-3UTR CAA 90 bp | TACTTTCTTAAACAACCCAGGACCACCAGTCCAGGGGTAGCACTGTCCAAAATGTTCTTGCGCTGGGCCTaGCTGGCTGGCTCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: YFLKQPRTTSPGVALSKMFLRWA*LAGSSS Trigger: TGAAGAGGAGCCAGCCAGCAAGGCCCAGCGCAAGAA...CATTTTGGACAGTGCTACCCCTGGACTGGTGGTCCTGGGTTGTTTAAGAAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | AGGCCTCTCTTCTCTGACAAGTCCAGCTTGTGTCAAACTGACATAAAACTAGGCAGGTTCTGGCGCCGCTaGTCCTGTCGCTGCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: RPLFSDKSSLCQTDIKLGRFWRR*SCRCCI Trigger: GATGCAGCAGCGACAGGACAAGCGGCGCCAGAACCT...GCCTAGTTTTATGTCAGTTTGACACAAGCTGGACTTGTCAGAGAAGAGAGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 90 bp | CTCAAACTGAAGAGATCCACCTTGTTAAAGATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATTTTGGGGGTCACCTCTACTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LKLKRSTLLKISPDS*SSLQAILGVTSTGS Trigger: GGAGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGTGGATCTCTTCAGTTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114043.2 |
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| CDS-3UTR CAA 90 bp | ATACAGAAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTCGAGCTGCCTTCTTCTaGCGCAGGTTCTGGCGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: IQKKIGKLGDTSARYNEVRAAFF*RRFWRR Trigger: GCGGCGCCAGAACCTGCGCAAGAAGAAGGCAGCTCG...AACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTTCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS-3UTR CAA 90 bp | AAGAAAATAGGGAAGTTAGGTGACACATCAGCAAGGTACAATGAGGTTACCTGGGAGGTAGGAGGCTTCTaGCCCAGGGCTTTAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KKIGKLGDTSARYNEVTWEVGGF*PRALVL Trigger: CAAGACTAAAGCCCTGGGCAAGAAGCCTCCTACCTC...CCAGGTAACCTCATTGTACCTTGCTGATGTGTCACCTAACTTCCCTATTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS-3UTR CAA 90 bp | CAGATGACAAACAAATACGAACACATGGGAGTGTGGTATCTGAATGTAATTTGTGAGGTAGGAGGCTTCTaGCCCAGGGCTTTAGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: QMTNKYEHMGVWYLNVICEVGGF*PRALVL Trigger: CAAGACTAAAGCCCTGGGCAAGAAGCCTCCTACCTC...ACAAATTACATTCAGATACCACACTCCCATGTGTTCGTATTTGTTTGTCATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CCA 72 bp | CGCTCCAGGTCCTGGGGAAGCACCCGGCCCTTCTTGTaGGCCTTCTGTAGCCGTCGCTCAGCCCGAGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: RSRSWGSTRPFL*AFCSRRSARAA Trigger: GGCAGCTCGGGCTGAGCGACGGCTACAGAAGGCCCACAAGAAGGGCCGGGTGCTTCCCCAGGACCTGGAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CAA 72 bp | GCACGCTCCAGGTCCTGGGGAAGCACCCGGCCCTTCTaGTGGGCCTTCTGTAGCCGTCGCTCAGCCCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: ARSRSWGSTRPF*WAFCSRRSARA Trigger: AGCTCGGGCTGAGCGACGGCTACAGAAGGCCCACAAGAAGGGCCGGGTGCTTCCCCAGGACCTGGAGCGTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS TCA 72 bp | ATCTTGGCCTCCAGCTCCTGGGCCTTGGCTGCATCCTaGTCACGAAGCTCGTCCAGGCGGCCCTGCCGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ILASSSWALAAS*SRSSSRRPCRA Trigger: GGCACGGCAGGGCCGCCTGGACGAGCTTCGTGATCAGGATGCAGCCAAGGCCCAGGAGCTGGAGGCCAAGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CAA 72 bp | TTCTGTAGCCGTCGCTCAGCCCGAGCTGCCTTCTTCTaGCGCAGGTTCTGGCGCCGCTTGTCCTGTCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FCSRRSARAAFF*RRFWRRLSCRC Trigger: GCAGCGACAGGACAAGCGGCGCCAGAACCTGCGCAAGAAGAAGGCAGCTCGGGCTGAGCGACGGCTACAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CAA 90 bp | TTGTGGGCCTTCTGTAGCCGTCGCTCAGCCCGAGCTGCCTTCTTCTaGCGCAGGTTCTGGCGCCGCTTGTCCTGTCGCTGCTGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LWAFCSRRSARAAFF*RRFWRRLSCRCCIF Trigger: GAAGATGCAGCAGCGACAGGACAAGCGGCGCCAGAACCTGCGCAAGAAGAAGGCAGCTCGGGCTGAGCGACGGCTACAGAAGGCCCACAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 72 bp | ATCCTGATCACGAAGCTCGTCCAGGCGGCCCTGCCGTaGCTGCAGACGGTCCAACAGCTGCCTGTAGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ILITKLVQAALP*LQTVQQLPVVP Trigger: AGGAACTACAGGCAGCTGTTGGACCGTCTGCAGGCACGGCAGGGCCGCCTGGACGAGCTTCGTGATCAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CCA 72 bp | TCGAGAGTGGCAGCAGACAACTCCTTGGTGCTACCCTaGCCCCGGGCCAGCTGGATCTTTTCATGCAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SRVAADNSLVLP*PRASWIFSCSR Trigger: GCGGCTGCATGAAAAGATCCAGCTGGCCCGGGGCCAGGGTAGCACCAAGGAGTTGTCTGCTGCCACTCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 72 bp | TGTGCCCGGCGCTTCTCTTTGCGCTTCAGGGCTTCCTaGAGCAGGCGTTCGTCATCCCTGATCTTCACACCC | + |
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Preference number: 6 (lower is better) Translates to: CARRFSLRFRAS*SRRSSSLIFTP Trigger: GGGTGTGAAGATCAGGGATGACGAACGCCTGCTGCAGGAAGCCCTGAAGCGCAAAGAGAAGCGCCGGGCACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 72 bp | TCTTCTCCACCACATGCTCTGAACGCTTCTCCCACTTaGGCTGCCGCTGTGCCCGGCGCTTCTCTTTGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPPHALNASPT*AAAVPGASLCA Trigger: AGCGCAAAGAGAAGCGCCGGGCACAGCGGCAGCGCAAGTGGGAGAAGCGTTCAGAGCATGTGGTGGAGAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS GCA 72 bp | TTGCGCAGGTTCTGGCGCCGCTTGTCCTGTCGCTGCTaGATCTTCTCCACCACATGCTCTGAACGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: LRRFWRRLSCRC*IFSTTCSERFS Trigger: GGAGAAGCGTTCAGAGCATGTGGTGGAGAAGATGCAGCAGCGACAGGACAAGCGGCGCCAGAACCTGCGCAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CCA 72 bp | CCCTCTCCTGCTTTCTCCGCTGTCTTTTCTCGAGAGTaGCAGCAGACAACTCCTTGGTGCTACCCTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: PSPAFSAVFSRE*QQTTPWCYPGP Trigger: GGGGCCAGGGTAGCACCAAGGAGTTGTCTGCTGCCACTCTCGAGAAAAGACAGCGGAGAAAGCAGGAGAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CCA 72 bp | GCTGTCTTTTCTCGAGAGTGGCAGCAGACAACTCCTTaGTGCTACCCTGGCCCCGGGCCAGCTGGATCTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AVFSREWQQTTP*CYPGPGPAGSF Trigger: AAAAGATCCAGCTGGCCCGGGGCCAGGGTAGCACCAAGGAGTTGTCTGCTGCCACTCTCGAGAAAAGACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS TCA 72 bp | GCAGACGGTCCAACAGCTGCCTGTAGTTCCTGCCTGTaGGCGGTGTCAGGTTCCCTTTCACTTTCTGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ADGPTAACSSCL*AVSGSLSLSAS Trigger: AGAGGCAGAAAGTGAAAGGGAACCTGACACCGCTCACAGGCAGGAACTACAGGCAGCTGTTGGACCGTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CCA 72 bp | TCTGTCGTTCAGGGCCAGGCTGCGCGCAGATCTTCTTaGCCAAGTCCTGAAGATAGGTATCCTTGGCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SVVQGQAARRSS*PSPEDRYPWPG Trigger: TCCTGGCCAAGGATACCTATCTTCAGGACTTGGCCAAGAAGATCTGCGCGCAGCCTGGCCCTGAACGACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CCA 72 bp | AAATCCAGTGCAAAGACAGACTCCCGTGCTGTGCCTTaGCTATCTTTAGGGGACCCCAGGGAGCTCAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: KSSAKTDSRAVP*LSLGDPRELKP Trigger: GGGCTTGAGCTCCCTGGGGTCCCCTAAAGATAGCCAAGGCACAGCACGGGAGTCTGTCTTTGCACTGGATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CAA 90 bp | CCCAGGGAGCTCAAGCCCTTCTCTTGTTTGGATACCATTGGGTTCTaGGGCCTAGAAGAGGTAGGAGGCTTCTTGCCCAGGGCTTTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRELKPFSCLDTIGF*GLEEVGGFLPRALV Trigger: GACTAAAGCCCTGGGCAAGAAGCCTCCTACCTCTTCTAGGCCCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCTTGAGCTCCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 72 bp | ACTGGCTCCTCCTTTTTCTCAGCCTCTGCAACCTGCTaGTTTGCTTGGCGCTCCTTCCTCTTCCTCTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: TGSSFFSASATC*FAWRSFLFLFF Trigger: GAAGAAGAGGAAGAGGAAGGAGCGCCAAGCAAAGCAGCAGGTTGCAGAGGCTGAGAAAAAGGAGGAGCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 72 bp | TCTACTGGCTCCTCCTTTTTCTCAGCCTCTGCAACCTaGTGCTTTGCTTGGCGCTCCTTCCTCTTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: STGSSFFSASAT*CFAWRSFLFLF Trigger: GAAGAGGAAGAGGAAGGAGCGCCAAGCAAAGCAGCAGGTTGCAGAGGCTGAGAAAAAGGAGGAGCCAGTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CAA 72 bp | ACCTTGTTAAAGATCAGCCCTGATTCCTGCAGCTCCTaGCAGGCCATTTTGGGGGTCACCTCTACTGGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: TLLKISPDSCSS*QAILGVTSTGS Trigger: GGAGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 72 bp | GTCACTTCCACCTTGTTAAAGATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATTTTGGGGGTCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTSTLLKISPDS*SSLQAILGVTS Trigger: AGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGTGGAAGTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047632.14 |
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| CDS CAA 72 bp | CTCAAGCCCTTCTCTTGTTTGGATACCATTGGGTTCTaGGGCCTAGAAGAGGTAGGAGGCTTCTTGCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LKPFSCLDTIGF*GLEEVGGFLPR Trigger: CCTGGGCAAGAAGCCTCCTACCTCTTCTAGGCCCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCTTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CAA 72 bp | TTAGGGGACCCCAGGGAGCTCAAGCCCTTCTCTTGTTaGGATACCATTGGGTTCTTGGGCCTAGAAGAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGDPRELKPFSC*DTIGFLGLEEV Trigger: TACCTCTTCTAGGCCCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCTTGAGCTCCCTGGGGTCCCCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS CAA 72 bp | GTAGCCCTGGCTGGCCTCAAACTGAAGAGATCCACCTaGTTAAAGATCAGCCCTGATTCCTGCAGCTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VALAGLKLKRST*LKISPDSCSSL Trigger: CAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGTGGATCTCTTCAGTTTGAGGCCAGCCAGGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114043.2 |
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| CDS CAA 90 bp | TTGTTAAAGATCAGCCCTGATTCCTGCAGCTCCTTGCAGGCCATTTaGGGGGTCACCTCTACTGGCTCCTCCTTTTTCTCAGCCTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LLKISPDSCSSLQAI*GVTSTGSSFFSASA Trigger: TGCAGAGGCTGAGAAAAAGGAGGAGCCAGTAGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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| CDS GCA 72 bp | AAGAGATCCACCTTGTTAAAGATCAGCCCTGATTCCTaGAGCTCCTTGCAGGCCATTTTGGGGGTCACCTCT | + |
|
Preference number: 6 (lower is better) Translates to: KRSTLLKISPDS*SSLQAILGVTS Trigger: AGAGGTGACCCCCAAAATGGCCTGCAAGGAGCTGCAGGAATCAGGGCTGATCTTTAACAAGGTGGATCTCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114043.2 |
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| CDS CAA 72 bp | ATCTTTAGGGGACCCCAGGGAGCTCAAGCCCTTCTCTaGTTTGGATACCATTGGGTTCTTGGGCCTAGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: IFRGPQGAQALL*FGYHWVLGPRR Trigger: TCTTCTAGGCCCAAGAACCCAATGGTATCCAAACAAGAGAAGGGCTTGAGCTCCCTGGGGTCCCCTAAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047632.14 ENSMUST00000114043.2 |
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