Pregenerated sensors for SURF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014867Ensembl transcript IDs: ENSMUST00000015011.10, ENSMUST00000153641.8, ENSMUST00000154651.2
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGAGGAATGAGGCCACAGCCCAGCACGCTGTCTCCTCCAAGCCTTaGCTAAGGAGTGACCATCCAGCTCGCCAGCCCTGGACAGTCAAG | + |
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Preference number: 1 (lower is better) Translates to: RRNEATAQHAVSSKP*LRSDHPARQPWTVK Trigger: CTTGACTGTCCAGGGCTGGCGAGCTGGATGGTCACTCCTTAGCCAAGGCTTGGAGGAGACAGCGTGCTGGGCTGTGGCCTCATTCCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 90 bp | ATTGTTTTCTCCCGTCCCAGGCGCACCCCACAGGAGGCTGGTAAATaGGCCAAGTACCCTTGGGATGAGGGTTCCCATCCCAGGCAGAAC | + |
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Preference number: 1 (lower is better) Translates to: IVFSRPRRTPQEAGK*AKYPWDEGSHPRQN Trigger: GTTCTGCCTGGGATGGGAACCCTCATCCCAAGGGTACTTGGCCCATTTACCAGCCTCCTGTGGGGTGCGCCTGGGACGGGAGAAAACAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 90 bp | ACTGCTTGGGGGAGCTCTCACGCATGGTTGGGACACCAGCAAACATaGTCTTCCCTTCTGAGCGGGATTCTGCCAAGAGCAGCAGCAAAC | + |
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Preference number: 1 (lower is better) Translates to: TAWGSSHAWLGHQQT*SSLLSGILPRAAAN Trigger: GTTTGCTGCTGCTCTTGGCAGAATCCCGCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CCA 90 bp | CCCTTCCTCCAAGCTGCATGTACTGCTTGGGGGAGCTCTCACGCATaGTTGGGACACCAGCAAACATGCTCTTCCCTTCTGAGCGGGATT | + |
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Preference number: 1 (lower is better) Translates to: PFLQAACTAWGSSHA*LGHQQTCSSLLSGI Trigger: AATCCCGCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CCA 90 bp | ACATCAGGACCAGCAGGACCCTTCCTCCAAGCTGCATGTACTGCTTaGGGGAGCTCTCACGCATGGTTGGGACACCAGCAAACATGCTCT | + |
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Preference number: 1 (lower is better) Translates to: TSGPAGPFLQAACTA*GSSHAWLGHQQTCS Trigger: AGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAAGGGTCCTGCTGGTCCTGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR GCA 90 bp | ATGAACATCAGGACCAGCAGGACCCTTCCTCCAAGCTGCATGTACTaGTTGGGGGAGCTCTCACGCATGGTTGGGACACCAGCAAACATG | + |
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Preference number: 1 (lower is better) Translates to: MNIRTSRTLPPSCMY*LGELSRMVGTPANM Trigger: CATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAAGGGTCCTGCTGGTCCTGATGTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CCA 90 bp | CTTCCCTCCAGGGGTTCTAAGTCTGTCTGTTCTCTCCAACAGACCTaGGAGAGATCCAGGAGGAACCCAACTACCCTCATGGCACTACCA | + |
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Preference number: 1 (lower is better) Translates to: LPSRGSKSVCSLQQT*ERSRRNPTTLMALP Trigger: TGGTAGTGCCATGAGGGTAGTTGGGTTCCTCCTGGATCTCTCCCAGGTCTGTTGGAGAGAACAGACAGACTTAGAACCCCTGGAGGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 90 bp | AGAAAGGAGGACCTCCAAGACTCTGTACCCAAGGGTGAGGTAAGCTaGCAGCTTCCCTCCAGGGGTTCTAAGTCTGTCTGTTCTCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: RKEDLQDSVPKGEVS*QLPSRGSKSVCSLQ Trigger: TTGGAGAGAACAGACAGACTTAGAACCCCTGGAGGGAAGCTGGCAGCTTACCTCACCCTTGGGTACAGAGTCTTGGAGGTCCTCCTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 90 bp | CCACCACCAAGCTTGAGGGATAGCAGCTTTCTAAGAACTTCCTGCTaGTTACCCCATCCCATCCCTGCTTGGAGCCATGAAAACTCCCAA | + |
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Preference number: 1 (lower is better) Translates to: PPPSLRDSSFLRTSC*LPHPIPAWSHENSQ Trigger: TTGGGAGTTTTCATGGCTCCAAGCAGGGATGGGATGGGGTAAGCAGCAGGAAGTTCTTAGAAAGCTGCTATCCCTCAAGCTTGGTGGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 90 bp | TTTCCACCACCAAGCTTGAGGGATAGCAGCTTTCTAAGAACTTCCTaGTGCTTACCCCATCCCATCCCTGCTTGGAGCCATGAAAACTCC | + |
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Preference number: 1 (lower is better) Translates to: FPPPSLRDSSFLRTS*CLPHPIPAWSHENS Trigger: GGAGTTTTCATGGCTCCAAGCAGGGATGGGATGGGGTAAGCAGCAGGAAGTTCTTAGAAAGCTGCTATCCCTCAAGCTTGGTGGTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 90 bp | CCAATCACTGACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATaGATGGGTTTATATACCGGGATTGTCCAGAAGGCGTTGAAATAC | + |
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Preference number: 1 (lower is better) Translates to: PITDMVWKKSYFRKS*MGLYTGIVQKALKY Trigger: GTATTTCAACGCCTTCTGGACAATCCCGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGGAATGGTGGTATCAGGGCTGTCGACGGGGTCGGCTCAGCCTGGAACAGGGCAGGCCAGGGCCCTGTaGCTCAGCCAGGGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RGMVVSGLSTGSAQPGTGQARAL*LSQGGE Trigger: CTCCCCTCCCTGGCTGAGGCACAGGGCCCTGGCCTG...CCCTGTTCCAGGCTGAGCCGACCCCGTCGACAGCCCTGATACCACCATTCCCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | GCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCACTGCAGGTGGCTGTGCAACGCCGGCAGTTTGTTaGCTCTGCCCTGAACCAGGC | + |
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Preference number: 2 (lower is better) Translates to: APLHRLECHGAATAGGCATPAVC*LCPEPG Trigger: GCCTGGTTCAGGGCAGAGTCAACAAACTGCCGGCGT...TGCACAGCCACCTGCAGTGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | GGGCTAGGTGTTGAGAAGGTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACGCCTTGGCTAAGGAGTaGCCATCCAGCTCGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: GLGVEKVNSACRASEARDALAKE*PSSSPA Trigger: GGCTGGCGAGCTGGATGGTCACTCCTTAGCCAAGGC...GTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCACCTTCTCAACACCTAGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCTCCTGCCTACCCAGCTaGTGCCAGAAAGGAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: TCLPGSAPLHRLECHGAASCLPS*CQKGGP Trigger: AGGTCCTCCTTTCTGGCATCAGCTGGGTAGGCAGGA...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | GGGCTAGGTGTTGAGAAGGTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACTTGTTGACTCTGCCCTaGACCAGGCCAGGGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GLGVEKVNSACRASEARDLLTLP*TRPGPC Trigger: ACAGGGCCCTGGCCTGGTTCAGGGCAGAGTCAACAA...GTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCACCTTCTCAACACCTAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCAGCGAGGCAAGGGACTaGCCCAAAGTGACTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: TCLPGSAPLHRLECHGAASEARD*PKVTQR Trigger: TCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCT...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCACCCTGCTTGGAGCCATaGAAACTCCCAAGGTACCTT | + |
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Preference number: 2 (lower is better) Translates to: LASQGLPHSTDWNVMGLPPCLEP*KLPRYL Trigger: AAGGTACCTTGGGAGTTTTCATGGCTCCAAGCAGGG...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CAA 90 bp | TCTGAGAAGGTCAAGTGTGAGGTAACTGGGTTGAGCCTGGGTGTCTaGAGTACTGGGACTCCTCACTTCTGGGCCCCATGGCATCGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SEKVKCEVTGLSLGV*STGTPHFWAPWHRC Trigger: ACAGCGATGCCATGGGGCCCAGAAGTGAGGAGTCCCAGTACTCAAGACACCCAGGCTCAACCCAGTTACCTCACACTTGACCTTCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CAA 90 bp | GAGTTCAGGCCTTGCTCTGAGAAGGTCAAGTGTGAGGTAACTGGGTaGAGCCTGGGTGTCTTGAGTACTGGGACTCCTCACTTCTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: EFRPCSEKVKCEVTG*SLGVLSTGTPHFWA Trigger: GGCCCAGAAGTGAGGAGTCCCAGTACTCAAGACACCCAGGCTCAACCCAGTTACCTCACACTTGACCTTCTCAGAGCAAGGCCTGAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CAA 90 bp | TTCCTCCAAGCTGCATGTACTGCTTGGGGGAGCTCTCACGCATGGTaGGGACACCAGCAAACATGCTCTTCCCTTCTGAGCGGGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: FLQAACTAWGSSHAW*GHQQTCSSLLSGIL Trigger: CAGAATCCCGCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCACCACTGGTAGAATTCTaGACTGGAGGTTTAACCGTT | + |
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Preference number: 2 (lower is better) Translates to: LASQGLPHSTDWNVMGLPPLVEF*TGGLTV Trigger: AACGGTTAAACCTCCAGTTCAGAATTCTACCAGTGG...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR GCA 90 bp | GGGCTAGGTGTTGAGAAGGTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACGTGGAGTTCAGGCCTTaGTCTGAGAAGGTCAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GLGVEKVNSACRASEARDVEFRP*SEKVKC Trigger: ACACTTGACCTTCTCAGAGCAAGGCCTGAACTCCAC...GTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCACCTTCTCAACACCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR CCA 90 bp | CAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTACCACAGCCTCAGGGGAATaGTGGTATCAGGGCTGTCGA | + |
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Preference number: 2 (lower is better) Translates to: QRGKGLTQSDSENKVLPTTASGE*WYQGCR Trigger: TCGACAGCCCTGATACCACCATTCCCCTGAGGCTGT...GGTAGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR CCA 90 bp | AGCCAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTCATCCCATCCCTGCTTaGAGCCATGAAAACTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SQRGKGLTQSDSENKVLPHPIPA*SHENSQ Trigger: TTGGGAGTTTTCATGGCTCCAAGCAGGGATGGGATG...AGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | GGCATCACAAATTGTAAAAAGTATCTTGGCTGCATACAGCAGAGCAAGTTGACAGTGTGGGCCATCCTGTaGGCAGCCTGCTCTCCTGCC | + |
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Preference number: 2 (lower is better) Translates to: GITNCKKYLGCIQQSKLTVWAIL*AACSPA Trigger: GGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACAC...TGTCAACTTGCTCTGCTGTATGCAGCCAAGATACTTTTTACAATTTGTGATGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTGCACTGAGGCAGCTCTGTGGTAAAGAACTAGCATGGCCTGAGCCAGTGGGTAGAATTCTGAACTaGAGGTTTAACCGTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: GCALRQLCGKELAWPEPVGRILN*RFNRLV Trigger: CACCAAACGGTTAAACCTCCAGTTCAGAATTCTACC...CACTGGCTCAGGCCATGCTAGTTCTTTACCACAGAGCTGCCTCAGTGCACAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR CCA 90 bp | CAGACGACGAGAGTCAAAGCTGCCAGCTTGGTTTTAAAACCGATGGCTACTAAGGCTCTCACGCATGGTTaGGACACCAGCAAACATGCT | + |
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Preference number: 2 (lower is better) Translates to: QTTRVKAASLVLKPMATKALTHG*DTSKHA Trigger: AGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGC...CTTAGTAGCCATCGGTTTTAAAACCAAGCTGGCAGCTTTGACTCTCGTCGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR TCA 90 bp | AGGAGCAGGCCTCCAATCACTGACATGGTCTGGAAGAAGTCGTATTTCAGGAAGAAGCTGGCATCAAAGTaGAGGAGGGTCATGAACATC | + |
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Preference number: 2 (lower is better) Translates to: RSRPPITDMVWKKSYFRKKLASK*RRVMNI Trigger: GATGTTCATGACCCTCCTTCACTTTGATGCCAGCTT...CTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGGAGGCCTGCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR CCA 90 bp | GTATCTTGGCTGCATACAGCAGAGCAAGTTGACAAAAATCTGAGCAAGCAACAGAGGCTGGTTCCATGGTaGTTGTGTGGGCCATCCTGT | + |
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Preference number: 2 (lower is better) Translates to: VSWLHTAEQVDKNLSKQQRLVPW*LCGPSC Trigger: ACAGGATGGCCCACACAACCACCATGGAACCAGCCT...CTGTTGCTTGCTCAGATTTTTGTCAACTTGCTCTGCTGTATGCAGCCAAGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR CCA 90 bp | ACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTATATACCGGCTGCATGTACTGCTTaGGGGAGCTCTCACGCATGG | + |
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Preference number: 2 (lower is better) Translates to: TWSGRSRISGSHAWVYIPAACTA*GSSHAW Trigger: CCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGC...CGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CAA 90 bp | AGGAAGTCATGCATGGGTTTATATACCGGGATTGTCCAGAAGGCGTaGAAATACACGTTGATGGCAAACAGCCAGACGACGAGAGTCAAA | + |
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Preference number: 2 (lower is better) Translates to: RKSCMGLYTGIVQKA*KYTLMANSQTTRVK Trigger: TTTGACTCTCGTCGTCTGGCTGTTTGCCATCAACGTGTATTTCAACGCCTTCTGGACAATCCCGGTATATAAACCCATGCATGACTTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGACTTGGGACAGCAGTAACACCCACCTTTCCAATACTGTACTGTTCTCTTTTCTCAAAACATCTGTaGCTTTACCAAGGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: QGLGTAVTPTFPILYCSLFSKHL*LYQGRG Trigger: TCCCCTCCCTTGGTAAAGGCACAGATGTTTTGAGAA...AAGAGAACAGTACAGTATTGGAAAGGTGGGTGTTACTGCTGTCCCAAGTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR-3UTR TCA 90 bp | GGCATCACAAATTGTAAAAAGTATCTTGGCTGCATACAGCAGAGCAAGTTGACAGAAGGGAAACTGCTTTaGATGATAAAAATACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: GITNCKKYLGCIQQSKLTEGKLL*MIKIQL Trigger: GAGCTGTATTTTTATCATTCAAAGCAGTTTCCCTTC...TGTCAACTTGCTCTGCTGTATGCAGCCAAGATACTTTTTACAATTTGTGATGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 72 bp | CCCTGGGACGAGGGCTTCTGCTGCACGGCATGCACTTaGCTCCCAGGGTCTGCCCCACTCCACAGACTGGAA | + |
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Preference number: 3 (lower is better) Translates to: PWDEGFCCTACT*LPGSAPLHRLE Trigger: TTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGTGCATGCCGTGCAGCAGAAGCCCTCGTCCCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | GAGGCCACAGCCCAGCACGCTGTCTCCTCCAAGCCTTaGCTAAGGAGTGACCATCCAGCTCGCCAGCCCTGG | + |
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Preference number: 3 (lower is better) Translates to: EATAQHAVSSKP*LRSDHPARQPW Trigger: CCAGGGCTGGCGAGCTGGATGGTCACTCCTTAGCCAAGGCTTGGAGGAGACAGCGTGCTGGGCTGTGGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | GGGCCCCATGGCATCGCTGTTCCCAGGCTGGTTCCATaGTGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCT | + |
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Preference number: 3 (lower is better) Translates to: GPHGIAVPRLVP*WLCGPSCEQPA Trigger: AGCAGGCTGCTCACAGGATGGCCCACACAACCACCATGGAACCAGCCTGGGAACAGCGATGCCATGGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | CCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATaGGGCTGCCACTGCAGGTGGCTGTGCACTGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: PRVCPTPQTGMS*GCHCRWLCTEA Trigger: TGCCTCAGTGCACAGCCACCTGCAGTGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | GCACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTaGAATGTCATGGGGCTGCCACTGCAGGTGGCTGTG | + |
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Preference number: 3 (lower is better) Translates to: ALASQGLPHSTD*NVMGLPLQVAV Trigger: CACAGCCACCTGCAGTGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | TCCCGTCCCAGGCGCACCCCACAGGAGGCTGGTAAATaGGCCAAGTACCCTTGGGATGAGGGTTCCCATCCC | + |
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Preference number: 3 (lower is better) Translates to: SRPRRTPQEAGK*AKYPWDEGSHP Trigger: GGGATGGGAACCCTCATCCCAAGGGTACTTGGCCCATTTACCAGCCTCCTGTGGGGTGCGCCTGGGACGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | CCCCATGGCATCGCTGTTCCCAGGCTGGTTCCATGGTaGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTC | + |
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Preference number: 3 (lower is better) Translates to: PHGIAVPRLVPW*LCGPSCEQPAL Trigger: GAGAGCAGGCTGCTCACAGGATGGCCCACACAACCACCATGGAACCAGCCTGGGAACAGCGATGCCATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR TCA 72 bp | CCAGCACGCTGTCTCCTCCAAGCCTTGGCTAAGGAGTaGCCATCCAGCTCGCCAGCCCTGGACAGTCAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PARCLLQALAKE*PSSSPALDSQD Trigger: GTCTTGACTGTCCAGGGCTGGCGAGCTGGATGGTCACTCCTTAGCCAAGGCTTGGAGGAGACAGCGTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | TCACTTCTGGGCCCCATGGCATCGCTGTTCCCAGGCTaGTTCCATGGTGGTTGTGTGGGCCATCCTGTGAGC | + |
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Preference number: 3 (lower is better) Translates to: SLLGPMASLFPG*FHGGCVGHPVS Trigger: GCTCACAGGATGGCCCACACAACCACCATGGAACCAGCCTGGGAACAGCGATGCCATGGGGCCCAGAAGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR TCA 72 bp | ACGACTTCCCCAAAAGGAACTCGGAGACAGGAGGAATaGGGCCACAGCCCAGCACGCTGTCTCCTCCAAGCC | + |
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Preference number: 3 (lower is better) Translates to: TTSPKGTRRQEE*GHSPARCLLQA Trigger: GGCTTGGAGGAGACAGCGTGCTGGGCTGTGGCCTCATTCCTCCTGTCTCCGAGTTCCTTTTGGGGAAGTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR GCA 72 bp | AGGACCAGCAGGACCCTTCCTCCAAGCTGCATGTACTaGTTGGGGGAGCTCTCACGCATGGTTGGGACACCA | + |
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Preference number: 3 (lower is better) Translates to: RTSRTLPPSCMY*LGELSRMVGTP Trigger: TGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAAGGGTCCTGCTGGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CCA 72 bp | ACCCCACAGGAGGCTGGTAAATGGGCCAAGTACCCTTaGGATGAGGGTTCCCATCCCAGGCAGAACCCACAG | + |
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Preference number: 3 (lower is better) Translates to: TPQEAGKWAKYP*DEGSHPRQNPQ Trigger: CTGTGGGTTCTGCCTGGGATGGGAACCCTCATCCCAAGGGTACTTGGCCCATTTACCAGCCTCCTGTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CCA 72 bp | CCAGCAGGACCCTTCCTCCAAGCTGCATGTACTGCTTaGGGGAGCTCTCACGCATGGTTGGGACACCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: PAGPFLQAACTA*GSSHAWLGHQQ Trigger: TTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGGAAGGGTCCTGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR-3UTR CAA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCATTTCCACCACCAAGCTaGAGGGATAGCAGCTTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LASQGLPHSTDWNVMGLPFPPPS*RDSSFL Trigger: TAGAAAGCTGCTATCCCTCAAGCTTGGTGGTGGAAA...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR GCA 72 bp | GGGGGTTGGGGACCACAACCTGTGGAGTTCAGGCCTTaGTCTGAGAAGGTCAAGTGTGAGGTAACTGGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GGWGPQPVEFRP*SEKVKCEVTGL Trigger: CAACCCAGTTACCTCACACTTGACCTTCTCAGAGCAAGGCCTGAACTCCACAGGTTGTGGTCCCCAACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR GCA 72 bp | GGGAGCTCTCACGCATGGTTGGGACACCAGCAAACATaGTCTTCCCTTCTGAGCGGGATTCTGCCAAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: GSSHAWLGHQQT*SSLLSGILPRA Trigger: TGCTCTTGGCAGAATCCCGCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR TCA 72 bp | CATGGTTGGGACACCAGCAAACATGCTCTTCCCTTCTaGGCGGGATTCTGCCAAGAGCAGCAGCAAACCTCC | + |
|
Preference number: 3 (lower is better) Translates to: HGWDTSKHALPF*AGFCQEQQQTS Trigger: GGAGGTTTGCTGCTGCTCTTGGCAGAATCCCGCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR GCA 72 bp | GACCTCCAAGACTCTGTACCCAAGGGTGAGGTAAGCTaGCAGCTTCCCTCCAGGGGTTCTAAGTCTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: DLQDSVPKGEVS*QLPSRGSKSVC Trigger: ACAGACAGACTTAGAACCCCTGGAGGGAAGCTGGCAGCTTACCTCACCCTTGGGTACAGAGTCTTGGAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR CCA 72 bp | CAAGCTGCATGTACTGCTTGGGGGAGCTCTCACGCATaGTTGGGACACCAGCAAACATGCTCTTCCCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QAACTAWGSSHA*LGHQQTCSSLL Trigger: CAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCCAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTTGTGAGGTAACTGGGTaGAGCCTGGGTGTCTTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: SQRGKGLTQSDSENKVLPCEVTG*SLGVLS Trigger: ACTCAAGACACCCAGGCTCAACCCAGTTACCTCACA...AGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR TCA 72 bp | GTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACTaGCCCAAAGTGACTCAGAGAACAAAGTCCTGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: VNSACRASEARD*PKVTQRTKSCL Trigger: TAGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR-3UTR CAA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCATTGTAAAAAGTATCTaGGCTGCATACAGCAGAGCA | + |
|
Preference number: 3 (lower is better) Translates to: TCLPGSAPLHRLECHGAAIVKSI*AAYSRA Trigger: TGCTCTGCTGTATGCAGCCAAGATACTTTTTACAAT...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR TCA 72 bp | GGGGCAGAAGCAATGCTGGGGCCACTGGTAGAATTCTaGACTGGAGGTTTAACCGTTTGGTGTTTGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GAEAMLGPLVEF*TGGLTVWCLAG Trigger: TCCAGCCAAACACCAAACGGTTAAACCTCCAGTTCAGAATTCTACCAGTGGCCCCAGCATTGCTTCTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTCCAATCACTGACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCAGCTGCATGTACTGCTaGGGGGAGCTCTCACGCATG | + |
|
Preference number: 3 (lower is better) Translates to: RPPITDMVWKKSYFRKSCSCMYC*GELSRM Trigger: CATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCT...GCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGGAGGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR TCA 72 bp | AAAGTGACTCAGAGAACAAAGTCCTGCCTACCCAGCTaGTGCCAGAAAGGAGGACCTCCAAGACTCTGTACC | + |
|
Preference number: 3 (lower is better) Translates to: KVTQRTKSCLPS*CQKGGPPRLCT Trigger: GGTACAGAGTCTTGGAGGTCCTCCTTTCTGGCATCAGCTGGGTAGGCAGGACTTTGTTCTCTGAGTCACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR GCA 72 bp | AGCTTGAGGGATAGCAGCTTTCTAAGAACTTCCTGCTaGTTACCCCATCCCATCCCTGCTTGGAGCCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLRDSSFLRTSC*LPHPIPAWSHE Trigger: TTCATGGCTCCAAGCAGGGATGGGATGGGGTAAGCAGCAGGAAGTTCTTAGAAAGCTGCTATCCCTCAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR CCA 72 bp | CCTTGGCTAAGGAGTGACCATCCAGCTCGCCAGCCCTaGACAGTCAAGACTCCAGACTATTTCCAAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: PWLRSDHPARQP*TVKTPDYFQRF Trigger: AAATCTTTGGAAATAGTCTGGAGTCTTGACTGTCCAGGGCTGGCGAGCTGGATGGTCACTCCTTAGCCAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR GCA 72 bp | GACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATaGATGGGTTTATATACCGGGATTGTCCAGAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: DMVWKKSYFRKS*MGLYTGIVQKA Trigger: CGCCTTCTGGACAATCCCGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTATATACCGGTCAAAGCTGCCAGCTaGGTTTTAAAACCGATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TWSGRSRISGSHAWVYIPVKAAS*VLKPMA Trigger: AGCCATCGGTTTTAAAACCAAGCTGGCAGCTTTGAC...CGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| 3UTR TCA 72 bp | AGTAACACCCACCTTTCCAATACTGTACTGTTCTCTTaGCTTGGTTTCTCTAACATCTTCACTGATCCTATA | + |
|
Preference number: 3 (lower is better) Translates to: SNTHLSNTVLFS*LGFSNIFTDPI Trigger: TATAGGATCAGTGAAGATGTTAGAGAAACCAAGTCAAGAGAACAGTACAGTATTGGAAAGGTGGGTGTTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR CAA 72 bp | ACCCTGGGACGAGGGCTTCTGCTGCACGGCATGCACTaGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TLGRGLLLHGMH*PPRVCPTPQTG Trigger: TCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGTGCATGCCGTGCAGCAGAAGCCCTCGTCCCAGGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCACAGAGGCGCGCCACATaGGGCAGGTACTGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LASQGLPHSTDWNVMGLPQRRAT*GRYCLV Trigger: CACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTG...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCACCTCCAGGAAGGTGCTaGTCAGGCAGAGGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPPPGRC*SGRGAP Trigger: TGGCGCGCCTCTGCCTGATCAGCACCTTCCTGGAGG...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCCGAAGTCCTCGGCCGTaGCCATCAGGTCGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLPGSAPLHRLECHGAARSPRP*PSGRSV Trigger: GACAGAACGACCTGATGGGCACGGCCGAGGACTTCG...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCAGTGACTCGAAGGAACTaGTCGGCGAAGTCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LASQGLPHSTDWNVMGLPVTRRN*SAKSSA Trigger: GGCCGAGGACTTCGCCGACCAGTTCCTTCGAGTCAC...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCAGCTGCATGTACTGCTTaGGGGAGCTCTCACGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LASQGLPHSTDWNVMGLPAACTA*GSSHAW Trigger: CCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGC...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCTCCACTGGAACCACATaGGGATGCCATCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TCLPGSAPLHRLECHGAASTGTT*GCHPPG Trigger: TCCTGGAGGATGGCATCCGCATGTGGTTCCAGTGGA...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | AGGGGAATGGTGGTATCAGGGCTGTCGACGGGGTCGGCTCAGCCTGGAACAGGGCCAAAGCAGGCATACTaGACGAAGTTCCTGCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGMVVSGLSTGSAQPGTGPKQAY*TKFLLS Trigger: GCTGAGCAGGAACTTCGTGCAGTATGCCTGCTTTGG...CCCTGTTCCAGGCTGAGCCGACCCCGTCGACAGCCCTGATACCACCATTCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAGCTGCATGTACTGCTTGGGGGAGCTCTCACGCATGGTTGGGACACCAGTGACTCGAAGGAACTaGTCGGCGAAGTCCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPSCMYCLGELSRMVGTPVTRRN*SAKSSA Trigger: GGCCGAGGACTTCGCCGACCAGTTCCTTCGAGTCAC...TGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGGAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGCACTGAGGCAGCTCTGTGGTAAAGAACTAGCATGGCCTGAGCCAGTGCATGGACACACCCCCTaGGCCAAGAGCCACCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GCALRQLCGKELAWPEPVHGHTP*AKSHHQ Trigger: CTGGTGGTGGCTCTTGGCCCAGGGGGTGTGTCCATG...CACTGGCTCAGGCCATGCTAGTTCTTTACCACAGAGCTGCCTCAGTGCACAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCAGAGGAACACGAAGGATaGGGCCAACAGGTAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPEEHEG*GQQVAT Trigger: TGTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTC...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCACATGCTCTTCCCTTCTaGGCGGGATTCTGCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPHALPF*AGFCQE Trigger: CTCTTGGCAGAATCCCGCTCAGAAGGGAAGAGCATG...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCAATTGTCCCAGCAGGTTaGGGAACACGAAGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPIVPAG*GTRRMR Trigger: CCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAAT...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCACAGGCCTCCAATCACTaGCATGGTCTGGAAGAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPQASNH*HGLEEV Trigger: GACTTCTTCCAGACCATGTCAGTGATTGGAGGCCTG...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | GGCTGTGCACTGAGGCAGCTCTGTGGTAAAGAACTAGCATGGCCTGAGCCAGTGGGAACCACATGCGGATaGCATCCTCCAGGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GCALRQLCGKELAWPEPVGTTCG*HPPGRC Trigger: GCACCTTCCTGGAGGATGGCATCCGCATGTGGTTCC...CACTGGCTCAGGCCATGCTAGTTCTTTACCACAGAGCTGCCTCAGTGCACAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | GGGCTAGGTGTTGAGAAGGTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACGGGAGCTCTCACGCATaGTTGGGACACCAGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: GLGVEKVNSACRASEARDGSSHA*LGHQQT Trigger: TGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCC...GTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCACCTTCTCAACACCTAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTACCCGCTGCTCACTCCACTaGAACCACATGCGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRGKGLTQSDSENKVLPTRCSLH*NHMRMP Trigger: TGGCATCCGCATGTGGTTCCAGTGGAGTGAGCAGCG...GGTAGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR CAA 72 bp | GTCAAGTGTGAGGTAACTGGGTTGAGCCTGGGTGTCTaGAGTACTGGGACTCCTCACTTCTGGGCCCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: VKCEVTGLSLGV*STGTPHFWAPW Trigger: CCATGGGGCCCAGAAGTGAGGAGTCCCAGTACTCAAGACACCCAGGCTCAACCCAGTTACCTCACACTTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| 3UTR CAA 72 bp | GCTGCATGTACTGCTTGGGGGAGCTCTCACGCATGGTaGGGACACCAGCAAACATGCTCTTCCCTTCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AACTAWGSSHAW*GHQQTCSSLLS Trigger: GCTCAGAAGGGAAGAGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR GCA 90 bp | GGGCTAGGTGTTGAGAAGGTGAATTCAGCCTGCAGAGCCAGCGAGGCAAGGGACGGCAATTGTCTGCAGTaGGATGATTCCAAACAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGVEKVNSACRASEARDGNCLQ*DDSKQP Trigger: GGGCTGTTTGGAATCATCGCACTGCAGACAATTGCC...GTCCCTTGCCTCGCTGGCTCTGCAGGCTGAATTCACCTTCTCAACACCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | CTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCAGACGAGAGTCAAAGCTaGCAGCTTGGTTTTAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: LASQGLPHSTDWNVMGLPDESQS*QLGFKT Trigger: GGTTTTAAAACCAAGCTGGCAGCTTTGACTCTCGTC...TGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | AGGGGAATGGTGGTATCAGGGCTGTCGACGGGGTCGGCTCAGCCTGGAACAGGGCTCCAATCACTGACATaGTCTGGAAGAAGTCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RGMVVSGLSTGSAQPGTGLQSLT*SGRSRI Trigger: AATACGACTTCTTCCAGACCATGTCAGTGATTGGAG...CCCTGTTCCAGGCTGAGCCGACCCCGTCGACAGCCCTGATACCACCATTCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | CATGTACTGCTTGGGGGAGCTCTCACGCATGGTTGGGACACCAGCAAACATGCTATTGTCCCAGCAGGTTaGGGAACACGAAGGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HVLLGGALTHGWDTSKHAIVPAG*GTRRMR Trigger: CCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAAT...AGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCTCCCCCAAGCAGTACATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTAGTGAAGGAGGGTCATaGACATCAGGACCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SQRGKGLTQSDSENKVLPSEGGS*TSGPAG Trigger: TCCTGCTGGTCCTGATGTTCATGACCCTCCTTCACT...AGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | CAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTACCGCTCTCACGCATGGTTaGGACACCAGCAAACATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QRGKGLTQSDSENKVLPTALTHG*DTSKHA Trigger: AGCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGC...GGTAGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | CAATCACTGACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTCCTCCAGGAAGGTGCTaGTCAGGCAGAGGCGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSLTWSGRSRISGSHAWVPPGRC*SGRGAP Trigger: TGGCGCGCCTCTGCCTGATCAGCACCTTCCTGGAGG...AACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCTCCCAGGGTCTGCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCTATTTCAGGAAGTCATaGATGGGTTTATATACCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TCLPGSAPLHRLECHGAAYFRKS*MGLYTG Trigger: CCCGGTATATAAACCCATGCATGACTTCCTGAAATA...GGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGCAGACCCTGGGAGGCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTGTGTGGGCCATCCTGTGAGCAGCCTGCTCTCCTGCCCTTTCCACCACCATCAGGAAGTCATGCATaGGTTTATATACCGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: WLCGPSCEQPALLPFPPPSGSHA*VYIPGL Trigger: CAATCCCGGTATATAAACCCATGCATGACTTCCTGA...TGGTGGTGGAAAGGGCAGGAGAGCAGGCTGCTCACAGGATGGCCCACACAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR TCA 90 bp | AAACCGATGGCTACTAAGATCATCAGAGCTGTGCCCACAATGTTCTGGATGATACAGAGGCGCGCCACATaGGGCAGGTACTGCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPMATKIIRAVPTMFWMIQRRAT*GRYCLV Trigger: CACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTG...TATCATCCAGAACATTGTGGGCACAGCTCTGATGATCTTAGTAGCCATCGGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR GCA 90 bp | CAAGGACTTGGGACAGCAGTAACACCCACCTTTCCAATACTGTACTGTTCTCTTCCAAGCTGCATGTACTaGTTGGGGGAGCTCTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLGTAVTPTFPILYCSLPSCMY*LGELSR Trigger: GCGTGAGAGCTCCCCCAAGCAGTACATGCAGCTTGG...AAGAGAACAGTACAGTATTGGAAAGGTGGGTGTTACTGCTGTCCCAAGTCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTATATACCGGGATTGTCGAAGTCCTCGGCCGTaGCCATCAGGTCGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEEVVFQEVMHGFIYRDCRSPRP*PSGRSV Trigger: GACAGAACGACCTGATGGGCACGGCCGAGGACTTCG...ACAATCCCGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
||
| CDS-3UTR GCA 90 bp | TGCATGGGTTTATATACCGGGATTGTCCAGAAGGCGTTGAAATACACGTTGATGGGAACCACATGCGGATaGCATCCTCCAGGAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CMGLYTGIVQKALKYTLMGTTCG*HPPGRC Trigger: GCACCTTCCTGGAGGATGGCATCCGCATGTGGTTCC...CATCAACGTGTATTTCAACGCCTTCTGGACAATCCCGGTATATAAACCCATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| CDS-3UTR CCA 90 bp | AGCCAGCGAGGCAAGGGACTGACCCAAAGTGACTCAGAGAACAAAGTCCTGCCTATCACTGACATGGTCTaGAAGAAGTCGTATTTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SQRGKGLTQSDSENKVLPITDMV*KKSYFR Trigger: CCTGAAATACGACTTCTTCCAGACCATGTCAGTGAT...AGGCAGGACTTTGTTCTCTGAGTCACTTTGGGTCAGTCCCTTGCCTCGCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS-3UTR CCA 90 bp | ACATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTATATACCGCGCTGCTCACTCCACTaGAACCACATGCGGATGCCA | + |
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Preference number: 4 (lower is better) Translates to: TWSGRSRISGSHAWVYIPRCSLH*NHMRMP Trigger: TGGCATCCGCATGTGGTTCCAGTGGAGTGAGCAGCG...CGGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| 3UTR CAA 72 bp | TGCATGGGTTTATATACCGGGATTGTCCAGAAGGCGTaGAAATACACGTTGATGGCAAACAGCCAGACGACG | + |
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Preference number: 4 (lower is better) Translates to: CMGLYTGIVQKA*KYTLMANSQTT Trigger: CGTCGTCTGGCTGTTTGCCATCAACGTGTATTTCAACGCCTTCTGGACAATCCCGGTATATAAACCCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| CDS-3UTR TCA 90 bp | GTATCTTGGCTGCATACAGCAGAGCAAGTTGACAAAAATCTGAGCAAGCAACAGTTGTCTGCAGTGCGATaGTTCCAAACAGCCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: VSWLHTAEQVDKNLSKQQLSAVR*FQTAQS Trigger: GCTTTGGGCTGTTTGGAATCATCGCACTGCAGACAA...CTGTTGCTTGCTCAGATTTTTGTCAACTTGCTCTGCTGTATGCAGCCAAGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS-3UTR CCA 90 bp | CAAGGACTTGGGACAGCAGTAACACCCACCTTTCCAATACTGTACTGTTCTCTTGTGCCCACAATGTTCTaGATGATAGAAAAGAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QGLGTAVTPTFPILYCSLVPTMF*MIEKKL Trigger: CAGCTTCTTTTCTATCATCCAGAACATTGTGGGCAC...AAGAGAACAGTACAGTATTGGAAAGGTGGGTGTTACTGCTGTCCCAAGTCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS-3UTR TCA 90 bp | GGCATCACAAATTGTAAAAAGTATCTTGGCTGCATACAGCAGAGCAAGTTGACAAAGCTGGCATCAAAGTaGAGGAGGGTCATGAACATC | + |
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Preference number: 4 (lower is better) Translates to: GITNCKKYLGCIQQSKLTKLASK*RRVMNI Trigger: GATGTTCATGACCCTCCTTCACTTTGATGCCAGCTT...TGTCAACTTGCTCTGCTGTATGCAGCCAAGATACTTTTTACAATTTGTGATGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CAA 72 bp | GCCACTGGTAGAATTCTGAACTGGAGGTTTAACCGTTaGGTGTTTGGCTGGACTATCCTAAGTCATTTAGTA | + |
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Preference number: 4 (lower is better) Translates to: ATGRILNWRFNR*VFGWTILSHLV Trigger: TACTAAATGACTTAGGATAGTCCAGCCAAACACCAAACGGTTAAACCTCCAGTTCAGAATTCTACCAGTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| 3UTR CAA 72 bp | AAGGATGTAAACTCAAAACTAAGAAGGGAAACTGCTTaGAATGATAAAAATACAGCTCAGTACGACTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: KDVNSKLRRETA*NDKNTAQYDFP Trigger: GGGGAAGTCGTACTGAGCTGTATTTTTATCATTCAAAGCAGTTTCCCTTCTTAGTTTTGAGTTTACATCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS TCA 90 bp | ATGCCATCCTCCAGGAAGGTGCTGATCAGGCAGAGGCGCGCCACATaGGGCAGGTACTGCTTGGTGACTCGAAGGAACTGGTCGGCGAAG | + |
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Preference number: 5 (lower is better) Translates to: MPSSRKVLIRQRRAT*GRYCLVTRRNWSAK Trigger: CTTCGCCGACCAGTTCCTTCGAGTCACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTGCCTGATCAGCACCTTCCTGGAGGATGGCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000153641.8 |
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| CDS TCA 90 bp | ATGCCATCCTCCAGGAAGGTGCTGATCAGGCAGAGGCGCGCCACATaGGGCAGGTACTGCTTGGTGACTCGAAGGAACAAGCAGCAGGTC | + |
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Preference number: 5 (lower is better) Translates to: MPSSRKVLIRQRRAT*GRYCLVTRRNKQQV Trigger: GACCTGCTGCTTGTTCCTTCGAGTCACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTGCCTGATCAGCACCTTCCTGGAGGATGGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154651.2 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCACTGAGGCAGCTCTGTGGTAAAGAACTAGCATGGCCTGAGCCAGTGAGCTGCATGTACTGCTaGGGGGAGCTCTCACGCATG | + |
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Preference number: 5 (lower is better) Translates to: GCALRQLCGKELAWPEPVSCMYC*GELSRM Trigger: CATGCGTGAGAGCTCCCCCAAGCAGTACATGCAGCT...CACTGGCTCAGGCCATGCTAGTTCTTTACCACAGAGCTGCCTCAGTGCACAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS TCA 90 bp | ACCCCCTGGGCCAAGAGCCACCACCAGGAGCAGGCCTCCAATCACTaGCATGGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGG | + |
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Preference number: 5 (lower is better) Translates to: TPWAKSHHQEQASNH*HGLEEVVFQEVMHG Trigger: CCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGGAGGCCTGCTCCTGGTGGTGGCTCTTGGCCCAGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS-3UTR CAA 90 bp | GGCTGTGCACTGAGGCAGCTCTGTGGTAAAGAACTAGCATGGCCTGAGCCAGTGAGCTCTCACGCATGGTaGGGACACCAGCAAACATGC | + |
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Preference number: 5 (lower is better) Translates to: GCALRQLCGKELAWPEPVSSHAW*GHQQTC Trigger: GCATGTTTGCTGGTGTCCCAACCATGCGTGAGAGCT...CACTGGCTCAGGCCATGCTAGTTCTTTACCACAGAGCTGCCTCAGTGCACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS TCA 90 bp | TCCTGCTCAGCACCAAAACACAGCCAGTCAATTGTCCCAGCAGGTTaGGGAACACGAAGGATGAGGCCAACAGGTAGCCACAGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: SCSAPKHSQSIVPAG*GTRRMRPTGSHSSR Trigger: CCTGGAGCTGTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAATTGACTGGCTGTGTTTTGGTGCTGAGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS-3UTR CAA 90 bp | GCCCCACTCCACAGACTGGAATGTCATGGGGCTGCCACTGCAGGTGGCTGTGCAATTGTCCAGAAGGCGTaGAAATACACGTTGATGGCA | + |
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Preference number: 5 (lower is better) Translates to: APLHRLECHGAATAGGCAIVQKA*KYTLMA Trigger: TGCCATCAACGTGTATTTCAACGCCTTCTGGACAAT...TGCACAGCCACCTGCAGTGGCAGCCCCATGACATTCCAGTCTGTGGAGTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS TCA 90 bp | AACACAGCCAGTCAATTGTCCCAGCAGGTTGAGGAACACGAAGGATaGGGCCAACAGGTAGCCACAGCTCCAGGTGGTGTCGATATAGTC | + |
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Preference number: 5 (lower is better) Translates to: NTASQLSQQVEEHEG*GQQVATAPGGVDIV Trigger: GACTATATCGACACCACCTGGAGCTGTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAATTGACTGGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS CCA 90 bp | CTGGGCCAAGAGCCACCACCAGGAGCAGGCCTCCAATCACTGACATaGTCTGGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTAT | + |
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Preference number: 5 (lower is better) Translates to: LGQEPPPGAGLQSLT*SGRSRISGSHAWVY Trigger: ATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGGAGGCCTGCTCCTGGTGGTGGCTCTTGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS CCA 90 bp | CCAAGAGCCACCACCAGGAGCAGGCCTCCAATCACTGACATGGTCTaGAAGAAGTCGTATTTCAGGAAGTCATGCATGGGTTTATATACC | + |
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Preference number: 5 (lower is better) Translates to: PRATTRSRPPITDMV*KKSYFRKSCMGLYT Trigger: GGTATATAAACCCATGCATGACTTCCTGAAATACGACTTCTTCCAGACCATGTCAGTGATTGGAGGCCTGCTCCTGGTGGTGGCTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS GCA 90 bp | ATTGTCTGCAGTGCGATGATTCCAAACAGCCCAAAGCAGGCATACTaGACGAAGTTCCTGCTCAGCACCAAAACACAGCCAGTCAATTGT | + |
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Preference number: 5 (lower is better) Translates to: IVCSAMIPNSPKQAY*TKFLLSTKTQPVNC Trigger: ACAATTGACTGGCTGTGTTTTGGTGCTGAGCAGGAACTTCGTGCAGTATGCCTGCTTTGGGCTGTTTGGAATCATCGCACTGCAGACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS-3UTR CAA 90 bp | CAAGGACTTGGGACAGCAGTAACACCCACCTTTCCAATACTGTACTGTTCTCTTAACACAGCCAGTCAATaGTCCCAGCAGGTTGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: QGLGTAVTPTFPILYCSLNTASQ*SQQVEE Trigger: TTCCTCAACCTGCTGGGACAATTGACTGGCTGTGTT...AAGAGAACAGTACAGTATTGGAAAGGTGGGTGTTACTGCTGTCCCAAGTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS-3UTR CAA 90 bp | CCAGCTCGCCAGCCCTGGACAGTCAAGACTCCAGACTATTTCCAAAGATTTTATGTCAAAGCTGCCAGCTaGGTTTTAAAACCGATGGCT | + |
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Preference number: 5 (lower is better) Translates to: PARQPWTVKTPDYFQRFYVKAAS*VLKPMA Trigger: AGCCATCGGTTTTAAAACCAAGCTGGCAGCTTTGAC...ATAAAATCTTTGGAAATAGTCTGGAGTCTTGACTGTCCAGGGCTGGCGAGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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| CDS TCA 72 bp | GGCAGAGGCGCGCCACATGAGGCAGGTACTGCTTGGTaGCTCGAAGGAACTGGTCGGCGAAGTCCTCGGCCG | + |
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Preference number: 6 (lower is better) Translates to: GRGAPHEAGTAW*LEGTGRRSPRP Trigger: CGGCCGAGGACTTCGCCGACCAGTTCCTTCGAGTCACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTGCC 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000153641.8 |
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| CDS TCA 72 bp | GGCAGAGGCGCGCCACATGAGGCAGGTACTGCTTGGTaGCTCGAAGGAACAAGCAGCAGGTCCCGCCCACCG | + |
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Preference number: 6 (lower is better) Translates to: GRGAPHEAGTAW*LEGTSSRSRPP Trigger: CGGTGGGCGGGACCTGCTGCTTGTTCCTTCGAGTCACCAAGCAGTACCTGCCTCATGTGGCGCGCCTCTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154651.2 |
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| CDS TCA 72 bp | GGAACCACATGCGGATGCCATCCTCCAGGAAGGTGCTaGTCAGGCAGAGGCGCGCCACATGAGGCAGGTACT | + |
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Preference number: 6 (lower is better) Translates to: GTTCGCHPPGRC*SGRGAPHEAGT Trigger: AGTACCTGCCTCATGTGGCGCGCCTCTGCCTGATCAGCACCTTCCTGGAGGATGGCATCCGCATGTGGTTCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015011.10 ENSMUST00000153641.8 ENSMUST00000154651.2 |
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| CDS TCA 72 bp | AGTCAATTGTCCCAGCAGGTTGAGGAACACGAAGGATaGGGCCAACAGGTAGCCACAGCTCCAGGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SQLSQQVEEHEG*GQQVATAPGGV Trigger: GACACCACCTGGAGCTGTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAATTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS TCA 72 bp | GTTCAATTGTCCCAGCAGGTTGAGGAACACGAAGGATaGGGCCAACAGGTAGCCACAGCTCCAGGTGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: VQLSQQVEEHEG*GQQVATAPGGV Trigger: GACACCACCTGGAGCTGTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAATTGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153641.8 |
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| CDS TCA 72 bp | GCACCAAAACACAGCCAGTCAATTGTCCCAGCAGGTTaGGGAACACGAAGGATGAGGCCAACAGGTAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: APKHSQSIVPAG*GTRRMRPTGSH Trigger: GTGGCTACCTGTTGGCCTCATCCTTCGTGTTCCTCAACCTGCTGGGACAATTGACTGGCTGTGTTTTGGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS GCA 72 bp | AGTGCGATGATTCCAAACAGCCCAAAGCAGGCATACTaGACGAAGTTCCTGCTCAGCACCAAAACACAGCCA | + |
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Preference number: 6 (lower is better) Translates to: SAMIPNSPKQAY*TKFLLSTKTQP Trigger: TGGCTGTGTTTTGGTGCTGAGCAGGAACTTCGTGCAGTATGCCTGCTTTGGGCTGTTTGGAATCATCGCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS TCA 72 bp | CCCACAAAATGCTATAGGCAATTGTCTGCAGTGCGATaGTTCCAAACAGCCCAAAGCAGGCATACTGCACGA | + |
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Preference number: 6 (lower is better) Translates to: PTKCYRQLSAVR*FQTAQSRHTAR Trigger: TCGTGCAGTATGCCTGCTTTGGGCTGTTTGGAATCATCGCACTGCAGACAATTGCCTATAGCATTTTGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015011.10 ENSMUST00000154651.2 |
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| CDS TCA 72 bp | GCAGCAGCAAACCTCCTCCTAAAGCCAGGTTCCTCATaGGAAACTTCAAGTCCCACAAAATGCTATAGGCAA | + |
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Preference number: 6 (lower is better) Translates to: AAANLLLKPGSS*ETSSPTKCYRQ Trigger: TTGCCTATAGCATTTTGTGGGACTTGAAGTTTCTCATGAGGAACCTGGCTTTAGGAGGAGGTTTGCTGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015011.10 |
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