Pregenerated sensors for SUPV3L1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020079Ensembl transcript IDs: ENSMUST00000020273.16, ENSMUST00000162023.2
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCTCCTTGTCACTGGGGCTGAGTGGCTCTGTGGCCTTATTCCCTaGACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTTGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: QLLVTGAEWLCGLIP*TFGATCPSRWALGG Trigger: GCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTCAGCCCCAGTGACAAGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | CGTGTCCTTCTCGCTGGGCTCTTGGAGGCTCCTGACAACCGTGACTaGTCCCCCGATGGTAAGCTCTCCAGATTCAAAAGCTTGCGTGAC | + |
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Preference number: 1 (lower is better) Translates to: RVLLAGLLEAPDNRD*SPDGKLSRFKSLRD Trigger: GTCACGCAAGCTTTTGAATCTGGAGAGCTTACCATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | TATTCCCTGCACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTTaGAGGCTCCTGACAACCGTGACTGGTCCCCCGATGGTAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: YSLHFWCHVSFSLGS*RLLTTVTGPPMVSS Trigger: AGAGCTTACCATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | ACTTTCTCTCTGCTGTGTTCTGGCTGCTGTGTCAGCCACTCCTTCTaGAGCTGCCTGAGCATGTCTGCAGTGAGGAGTCCTTGCTGCACC | + |
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Preference number: 1 (lower is better) Translates to: TFSLLCSGCCVSHSF*SCLSMSAVRSPCCT Trigger: GGTGCAGCAAGGACTCCTCACTGCAGACATGCTCAGGCAGCTCCAGAAGGAGTGGCTGACACAGCAGCCAGAACACAGCAGAGAGAAAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR TCA 90 bp | CAGGTCGTCTCGGTGCATTGTGGTAACCTGCCCCTCTTTAAAGTGTaGGCTGAATCTGCCAGCTCTGCCTGCAATCTGCAGGGCTTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QVVSVHCGNLPLFKV*AESASSACNLQGLG Trigger: TCCCAAGCCCTGCAGATTGCAGGCAGAGCTGGCAGATTCAGCTCACACTTTAAAGAGGGGCAGGTTACCACAATGCACCGAGACGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | CCTCGGCACAGAGCCCTAGCAGTGCTCTGGTCCAAGCCCATCCTCTaGCTGGGTCTCGAATCATCTGGATTTCATCTATCACTGCCACTT | + |
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Preference number: 1 (lower is better) Translates to: PRHRALAVLWSKPIL*LGLESSGFHLSLPL Trigger: AAGTGGCAGTGATAGATGAAATCCAGATGATTCGAGACCCAGCCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGCTCTGTGCCGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | CTCCACATAAATGGACTTCCTCGGCACAGAGCCCTAGCAGTGCTCTaGTCCAAGCCCATCCTCTGGCTGGGTCTCGAATCATCTGGATTT | + |
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Preference number: 1 (lower is better) Translates to: LHINGLPRHRALAVL*SKPILWLGLESSGF Trigger: AAATCCAGATGATTCGAGACCCAGCCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGCTCTGTGCCGAGGAAGTCCATTTATGTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | AGGAGCTCAGAGACCAGGTTAATAGCAGCAGACTCTCCACATAAATaGACTTCCTCGGCACAGAGCCCTAGCAGTGCTCTGGTCCAAGCC | + |
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Preference number: 1 (lower is better) Translates to: RSSETRLIAADSPHK*TSSAQSPSSALVQA Trigger: GGCTTGGACCAGAGCACTGCTAGGGCTCTGTGCCGAGGAAGTCCATTTATGTGGAGAGTCTGCTGCTATTAACCTGGTCTCTGAGCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | CTGTACTGCCTGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTaGTTCTTATTGATGGGGGCTGTGCAGAACACATACCTCACCCGG | + |
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Preference number: 1 (lower is better) Translates to: LYCLANCNNDEQTKG*FLLMGAVQNTYLTR Trigger: CCGGGTGAGGTATGTGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAGGCAGTACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | ATGTCCTTCAATAAAGCCAGGTCGTCTCGGTGCATTGTGGTAACCTaGCCCTCTTTAAAGTGTGAGCTGAATCTGCCAGCTCTGCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: MSFNKARSSRCIVVT*PSLKCELNLPALPA Trigger: TGCAGGCAGAGCTGGCAGATTCAGCTCACACTTTAAAGAGGGGCAGGTTACCACAATGCACCGAGACGACCTGGCTTTATTGAAGGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR TCA 90 bp | ACCAGGATCTTGCATGGATCATTGGGGTCATTAAACTTTCTTGCTTaGGCAAGTTTGGTCCCAGGTGGCAAGCTGCCGTATATCACCGCG | + |
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Preference number: 1 (lower is better) Translates to: TRILHGSLGSLNFLA*ASLVPGGKLPYITA Trigger: CGCGGTGATATACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAGATCCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR TCA 90 bp | TGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTGCTTCTTATTaGTGGGGGCTGTGCAGAACACATACCTCACCCGGAGACTTAGTG | + |
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Preference number: 1 (lower is better) Translates to: WQTVTTTSRQKAASY*WGLCRTHTSPGDLV Trigger: CACTAAGTCTCCGGGTGAGGTATGTGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | GGGGCTGTGCAGAACACATACCTCACCCGGAGACTTAGTGGGATATaGTGGATCAGCTCTGCAGAGAACTTAAAATCATCCATATTGCAG | + |
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Preference number: 1 (lower is better) Translates to: GAVQNTYLTRRLSGI*WISSAENLKSSILQ Trigger: CTGCAATATGGATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCATATCCCACTAAGTCTCCGGGTGAGGTATGTGTTCTGCACAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | CCATCCTCTGGCTGGGTCTCGAATCATCTGGATTTCATCTATCACTaGCACTTCATAAGGAGTTGCAACATTGCACATCTCCACAGTGCA | + |
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Preference number: 1 (lower is better) Translates to: PSSGWVSNHLDFIYH*HFIRSCNIAHLHSA Trigger: TGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGGCAGTGATAGATGAAATCCAGATGATTCGAGACCCAGCCAGAGGATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | GCTGTGCAGAACACATACCTCACCCGGAGACTTAGTGGGATATGCTaGATCAGCTCTGCAGAGAACTTAAAATCATCCATATTGCAGACA | + |
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Preference number: 1 (lower is better) Translates to: AVQNTYLTRRLSGIC*ISSAENLKSSILQT Trigger: TGTCTGCAATATGGATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCATATCCCACTAAGTCTCCGGGTGAGGTATGTGTTCTGCACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | TCGAATCATCTGGATTTCATCTATCACTGCCACTTCATAAGGAGTTaGAACATTGCACATCTCCACAGTGCAAGAGACATGGGTGGCTTG | + |
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Preference number: 1 (lower is better) Translates to: SNHLDFIYHCHFIRS*NIAHLHSARDMGGL Trigger: CAAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGGCAGTGATAGATGAAATCCAGATGATTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | ACAGGTCTATTCAAAATGTCCTTCAATAAAGCCAGGTCGTCTCGGTaGATTGTGGTAACCTGCCCCTCTTTAAAGTGTGAGCTGAATCTG | + |
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Preference number: 1 (lower is better) Translates to: TGLFKMSFNKARSSR*IVVTCPSLKCELNL Trigger: CAGATTCAGCTCACACTTTAAAGAGGGGCAGGTTACCACAATGCACCGAGACGACCTGGCTTTATTGAAGGACATTTTGAATAGACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | GACTCAGAGATTTTAATCAGCTTGGTGATGTTGTGCACGCCTTCTTaGATAATGGCATCCAGCTCTTTCTGGAGACTTCGAACAAGGCTA | + |
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Preference number: 1 (lower is better) Translates to: DSEILISLVMLCTPS*IMASSSFWRLRTRL Trigger: TAGCCTTGTTCGAAGTCTCCAGAAAGAGCTGGATGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | AAAAGCTTGCGTGACTCAGAGATTTTAATCAGCTTGGTGATGTTGTaGACGCCTTCTTGGATAATGGCATCCAGCTCTTTCTGGAGACTT | + |
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Preference number: 1 (lower is better) Translates to: KSLRDSEILISLVML*TPSWIMASSSFWRL Trigger: AAGTCTCCAGAAAGAGCTGGATGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTCACGCAAGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CCA 90 bp | ATTAAGTCCCATGCCAATTGCATCTGTGGCTACCAGGATCTTGCATaGATCATTGGGGTCATTAAACTTTCTTGCTTGAGCAAGTTTGGT | + |
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Preference number: 1 (lower is better) Translates to: IKSHANCICGYQDLA*IIGVIKLSCLSKFG Trigger: ACCAAACTTGCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAGATCCTGGTAGCCACAGATGCAATTGGCATGGGACTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR GCA 90 bp | CTTAAAATCATCCATATTGCAGACAAAGTACTGCCCATCAACTTGTaGAAAGTCTACAAAAATATCAATGAGATTGGACAGCGTTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: LKIIHIADKVLPINL*KVYKNINEIGQRCL Trigger: GAGACAACGCTGTCCAATCTCATTGATATTTTTGTAGACTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAATATGGATGATTTTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | TTGTCACTGGGGCTGAGTGGCTCTGTGGCCTTATTCCCTGCACTTTaGGTGCCACGTGTCCTTCTCGCTGGGCTCTTGGAGGCTCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LSLGLSGSVALFPAL*VPRVLLAGLLEAPD Trigger: GTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTCAGCCCCAGTGACAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | TTATTCCCTGCACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTaGGAGGCTCCTGACAACCGTGACTGGTCCCCCGATGGTAAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LFPALLVPRVLLAGL*EAPDNRDWSPDGKL Trigger: GAGCTTACCATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | GTCGGGTGGAGACCGGCGGCCTGTATAGGATCCACAGGTCTATTCAAAATGTCCGCAATCTGCAGGGCTTaGGAGGTGGTGATGGGCTCC | + |
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Preference number: 2 (lower is better) Translates to: VGWRPAACIGSTGLFKMSAICRA*EVVMGS Trigger: GGAGCCCATCACCACCTCCCAAGCCCTGCAGATTGC...GGACATTTTGAATAGACCTGTGGATCCTATACAGGCCGCCGGTCTCCACCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCATGTCTGCAGTGAGGAGTCCTTGCTGCACCAACCTAGAGGCAAGGGGCCCCCTCTTTAAAGTGTaGGCTGAATCTGCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSMSAVRSPCCTNLEARGPLFKV*AESASS Trigger: AGAGCTGGCAGATTCAGCTCACACTTTAAAGAGGGG...GCCCCTTGCCTCTAGGTTGGTGCAGCAAGGACTCCTCACTGCAGACATGCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTTGGAGGCTCCTGACAACCTGCCAATTGCATCTGTaGCTACCAGGATCTTGCATG | + |
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Preference number: 2 (lower is better) Translates to: HFWCHVSFSLGSWRLLTTCQLHL*LPGSCM Trigger: CATGCAAGATCCTGGTAGCCACAGATGCAATTGGCA...GGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGCCGTATATCACCGCGGATTCCAGTCCCCGAATTTCAATCTGTCGGCTCTCCAAGCCCATCCTCTaGCTGGGTCTCGAATCATCT | + |
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Preference number: 2 (lower is better) Translates to: KLPYITADSSPRISICRLSKPIL*LGLESS Trigger: AGATGATTCGAGACCCAGCCAGAGGATGGGCTTGGA...GAGCCGACAGATTGAAATTCGGGGACTGGAATCCGCGGTGATATACGGCAGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCCAGGTGGCAAGCTGCCGTATATCACCGCGGATTCCAGTCCCCGAATTTGGGTCTCGAATCATCTaGATTTCATCTATCACTGCC | + |
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Preference number: 2 (lower is better) Translates to: WSQVASCRISPRIPVPEFGSRII*ISSITA Trigger: GGCAGTGATAGATGAAATCCAGATGATTCGAGACCC...AAATTCGGGGACTGGAATCCGCGGTGATATACGGCAGCTTGCCACCTGGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGCTGAGTGGCTCTGTGGCCTTATTCCCTGCACTTTTGGTGCCACGTGTCCTAGATCAAAGACGTCATaGACAGCTTCAAGATCCATG | + |
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Preference number: 2 (lower is better) Translates to: GAEWLCGLIPCTFGATCPRSKTS*TASRSM Trigger: CATGGATCTTGAAGCTGTCCATGACGTCTTTGATCT...AGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTCAGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | AGATCCATGAGGTCTTTAATATTCTTAGGCGGAAGCAGAGGCCACTaGATGTACCGGCGTAGCCATGCAAAGGTCAGGGGCTCATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: RSMRSLIFLGGSRGH*MYRRSHAKVRGSFL Trigger: CAGGAATGAGCCCCTGACCTTTGCATGGCTACGCCGGTACATCAAGTGGCCTCTGCTTCCGCCTAAGAATATTAAAGACCTCATGGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTACAAAAATATCAATGAGATTGGACAGCGTTGTCTCGGGGAGGTGGTAGGCATGCAGTCCCCAGGCTaGAGGTTGTCCAAAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VYKNINEIGQRCLGEVVGMQSPG*RLSKDS Trigger: GGAGTCTTTGGACAACCTTCAGCCTGGGGACTGCAT...GCCTACCACCTCCCCGAGACAACGCTGTCCAATCTCATTGATATTTTTGTAGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR GCA 90 bp | ATCGGAGTCGGGGTCCTTCTTCTTTCTCCGTGTCCCCACTTTCTCTCTGCTGTGTCATTCCTGCTGTACTaGCTGGCAAACTGTAACAAC | + |
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Preference number: 2 (lower is better) Translates to: IGVGVLLLSPCPHFLSAVSFLLY*LANCNN Trigger: GTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGA...CACAGCAGAGAGAAAGTGGGGACACGGAGAAAGAAGAAGGACCCCGACTCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCATGTCTGCAGTGAGGAGTCCTTGCTGCACCAACCTAGAGGCAAGGGGCTACCAGGATCTTGCATaGATCATTGGGGTCATTAAA | + |
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Preference number: 2 (lower is better) Translates to: LSMSAVRSPCCTNLEARGYQDLA*IIGVIK Trigger: TTTAATGACCCCAATGATCCATGCAAGATCCTGGTA...GCCCCTTGCCTCTAGGTTGGTGCAGCAAGGACTCCTCACTGCAGACATGCTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | CTGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTGCTTCTTATaGATGGGGGCTGTGCAGAACACATACCTCACCCGGAGACTTAGT | + |
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Preference number: 2 (lower is better) Translates to: LANCNNDEQTKGCFL*MGAVQNTYLTRRLS Trigger: ACTAAGTCTCCGGGTGAGGTATGTGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGCTCTGTGGCCTTATTCCCTGCACTTTTGGTGCCACGTGTCCTTCTCGCGTCATTAAACTTTCTTaGTTGAGCAAGTTTGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EWLCGLIPCTFGATCPSRVIKLS*LSKFGP Trigger: GGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGAC...GCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGCTCAGAGACCAGGTTAATAGCAGCAGACTCTCCACATAAATGGACTTCCTGCAAGAGACATGGGTaGCTTGTTTCCCCTCAGGCT | + |
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Preference number: 2 (lower is better) Translates to: RSSETRLIAADSPHKWTSCKRHG*LVSPQA Trigger: AGCCTGAGGGGAAACAAGCCACCCATGTCTCTTGCA...GGAAGTCCATTTATGTGGAGAGTCTGCTGCTATTAACCTGGTCTCTGAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | GGATCCACAGGTCTATTCAAAATGTCCTTCAATAAAGCCAGGTCGTCTCGGTGCAGCCCATCCTCTGGCTaGGTCTCGAATCATCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: GSTGLFKMSFNKARSSRCSPSSG*VSNHLD Trigger: ATCCAGATGATTCGAGACCCAGCCAGAGGATGGGCT...GCACCGAGACGACCTGGCTTTATTGAAGGACATTTTGAATAGACCTGTGGATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTGCTTCTTATTGATGGGGTTGCTTGAGCAAGTTTaGTCCCAGGTGGCAAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: LANCNNDEQTKGCFLLMGLLEQV*SQVASC Trigger: GCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAA...CCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | TACCAGGATCTTGCATGGATCATTGGGGTCATTAAACTTTCTTGCTaGAGCAAGTTTGGTCCCAGGTGGCAAGCTGCCGTATATCACCGC | + |
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Preference number: 2 (lower is better) Translates to: YQDLAWIIGVIKLSC*SKFGPRWQAAVYHR Trigger: GCGGTGATATACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAGATCCTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | AATAATTCTCCTTATGCTCAAATTAAGTCCCATGCCAATTGCATCTGTGGCTACGCCCTAGCAGTGCTCTaGTCCAAGCCCATCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: NNSPYAQIKSHANCICGYALAVL*SKPILW Trigger: CCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGC...GTAGCCACAGATGCAATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCAGCTCCTTCTCTCCCTTTTCATTGATGCTGGGCTTTATAAGGGAGTAAAACCAGATAGTACAAGTTaGCCACAATCCTGCCTCAGG | + |
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Preference number: 2 (lower is better) Translates to: LQLLLSLFIDAGLYKGVKPDSTS*PQSCLR Trigger: CCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGG...TTTTACTCCCTTATAAAGCCCAGCATCAATGAAAAGGGAGAGAAGGAGCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | CTCGAATCATCTGGATTTCATCTATCACTGCCACTTCATAAGGAGTaGCAACATTGCACATCTCCACAGTGCAAGAGACATGGGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LESSGFHLSLPLHKE*QHCTSPQCKRHGWL Trigger: AAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGGCAGTGATAGATGAAATCCAGATGATTCGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | CTCTCCAGATTCAAAAGCTTGCGTGACTCAGAGATTTTAATCAGCTaGGTGATGTTGTGCACGCCTTCTTGGATAATGGCATCCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: LSRFKSLRDSEILIS*VMLCTPSWIMASSS Trigger: AGAGCTGGATGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTCACGCAAGCTTTTGAATCTGGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR GCA 90 bp | AATAATTCTCCTTATGCTCAAATTAAGTCCCATGCCAATTGCATCTGTGGCTACAGTTGGCCACAATCCTaGCTCAGGCAGAGAATGCCG | + |
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Preference number: 2 (lower is better) Translates to: NNSPYAQIKSHANCICGYSWPQS*LRQRMP Trigger: CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACT...GTAGCCACAGATGCAATTGGCATGGGACTTAATTTGAGCATAAGGAGAATTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCATTCCTGCTGTACTGCCTGGCAAACTGTAACAACGACGAGCAGACAAAAGCTACAAAAATATCAATaGGATTGGACAGCGTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: AHSCCTAWQTVTTTSRQKLQKYQ*DWTALS Trigger: AGACAACGCTGTCCAATCTCATTGATATTTTTGTAG...CTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | GGGATATGCTGGATCAGCTCTGCAGAGAACTTAAAATCATCCATATaGCAGACAAAGTACTGCCCATCAACTTGTGCAAAGTCTACAAAA | + |
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Preference number: 2 (lower is better) Translates to: GICWISSAENLKSSI*QTKYCPSTCAKSTK Trigger: TTTTGTAGACTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAATATGGATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCATATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| 3UTR CAA 90 bp | GAACTTAAAATCATCCATATTGCAGACAAAGTACTGCCCATCAACTaGTGCAAAGTCTACAAAAATATCAATGAGATTGGACAGCGTTGT | + |
|
Preference number: 2 (lower is better) Translates to: ELKIIHIADKVLPIN*CKVYKNINEIGQRC Trigger: ACAACGCTGTCCAATCTCATTGATATTTTTGTAGACTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAATATGGATGATTTTAAGTTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | CACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTTaGAGGCTCCTGACAACCGTGACTGGTCCCCCGATG | + |
|
Preference number: 3 (lower is better) Translates to: HFWCHVSFSLGS*RLLTTVTGPPM Trigger: CATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | AAGTGTGAGCTGAATCTGCCAGCTCTGCCTGCAATCTaGAGGGCTTGGGAGGTGGTGATGGGCTCCAGCTCC | + |
|
Preference number: 3 (lower is better) Translates to: KCELNLPALPAI*RAWEVVMGSSS Trigger: GGAGCTGGAGCCCATCACCACCTCCCAAGCCCTGCAGATTGCAGGCAGAGCTGGCAGATTCAGCTCACACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | GTCACTGGGGCTGAGTGGCTCTGTGGCCTTATTCCCTaGACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VTGAEWLCGLIP*TFGATCPSRWA Trigger: AGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTCAGCCCCAGTGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CTCCGTGTCCCCACTTTCTCTCTGCTGTGTTCTGGCTaGTGTGTCAGCCACTCCTTCTGGAGCTGCCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRVPTFSLLCSG*CVSHSFWSCLS Trigger: GCTCAGGCAGCTCCAGAAGGAGTGGCTGACACAGCAGCCAGAACACAGCAGAGAGAAAGTGGGGACACGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTGTCTCGGGGAGGTGGTAGGCAAACATCTCAATCTGCTCGGCAGTCGGGTGAGAGACATGGGTGGCTaGTTTCCCCTCAGGCTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: RCLGEVVGKHLNLLGSRVRDMGG*FPLRLH Trigger: GTGGAGCCTGAGGGGAAACAAGCCACCCATGTCTCT...CACCCGACTGCCGAGCAGATTGAGATGTTTGCCTACCACCTCCCCGAGACAACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | AGCTGCCTGAGCATGTCTGCAGTGAGGAGTCCTTGCTaGACCAACCTAGAGGCAAGGGGCAGCTCCTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SCLSMSAVRSPC*TNLEARGSSLS Trigger: TGACAAGGAGCTGCCCCTTGCCTCTAGGTTGGTGCAGCAAGGACTCCTCACTGCAGACATGCTCAGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | AATGGACTTCCTCGGCACAGAGCCCTAGCAGTGCTCTaGTCCAAGCCCATCCTCTGGCTGGGTCTCGAATCA | + |
|
Preference number: 3 (lower is better) Translates to: NGLPRHRALAVL*SKPILWLGLES Trigger: TGATTCGAGACCCAGCCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGCTCTGTGCCGAGGAAGTCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | CTCGCTGGGCTCTTGGAGGCTCCTGACAACCGTGACTaGTCCCCCGATGGTAAGCTCTCCAGATTCAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LAGLLEAPDNRD*SPDGKLSRFKS Trigger: GCTTTTGAATCTGGAGAGCTTACCATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | ACCGGCGTAGCCATGCAAAGGTCAGGGGCTCATTCCTaGTGTACTGCCTGGCAAACTGTAACAACGACGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TGVAMQRSGAHS*CTAWQTVTTTS Trigger: GCTCGTCGTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGAGCCCCTGACCTTTGCATGGCTACGCCGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | CAACATTGCACATCTCCACAGTGCAAGAGACATGGGTaGCTTGTTTCCCCTCAGGCTCCACTGTCAGCCGCT | + |
|
Preference number: 3 (lower is better) Translates to: QHCTSPQCKRHG*LVSPQAPLSAA Trigger: AGCGGCTGACAGTGGAGCCTGAGGGGAAACAAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGGCTCTGTGGCCTTATTCCCTGCACTTTTGGTGCCACGTGTCCTTCTCGCAAAGGCTGCTTCTTATaGATGGGGGCTGTGCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EWLCGLIPCTFGATCPSRKGCFL*MGAVQN Trigger: GTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTT...GCGAGAAGGACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACAGAGCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | GTTGCAACATTGCACATCTCCACAGTGCAAGAGACATaGGTGGCTTGTTTCCCCTCAGGCTCCACTGTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VATLHISTVQET*VACFPSGSTVS Trigger: GCTGACAGTGGAGCCTGAGGGGAAACAAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR TCA 72 bp | TCGGTGCATTGTGGTAACCTGCCCCTCTTTAAAGTGTaGGCTGAATCTGCCAGCTCTGCCTGCAATCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVHCGNLPLFKV*AESASSACNLQ Trigger: CTGCAGATTGCAGGCAGAGCTGGCAGATTCAGCTCACACTTTAAAGAGGGGCAGGTTACCACAATGCACCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | TTCTTGCTTGAGCAAGTTTGGTCCCAGGTGGCAAGCTaGCGTATATCACCGCGGATTCCAGTCCCCGAATTT | + |
|
Preference number: 3 (lower is better) Translates to: FLLEQVWSQVAS*RISPRIPVPEF Trigger: AAATTCGGGGACTGGAATCCGCGGTGATATACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | AGAGCCCTAGCAGTGCTCTGGTCCAAGCCCATCCTCTaGCTGGGTCTCGAATCATCTGGATTTCATCTATCA | + |
|
Preference number: 3 (lower is better) Translates to: RALAVLWSKPIL*LGLESSGFHLS Trigger: TGATAGATGAAATCCAGATGATTCGAGACCCAGCCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | GAGACCAGGTTAATAGCAGCAGACTCTCCACATAAATaGACTTCCTCGGCACAGAGCCCTAGCAGTGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ETRLIAADSPHK*TSSAQSPSSAL Trigger: CAGAGCACTGCTAGGGCTCTGTGCCGAGGAAGTCCATTTATGTGGAGAGTCTGCTGCTATTAACCTGGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCCCAGGTGGCAAGCTGCCGTATATCACCGCGGATTCCAGTCCCCGAATTTCCACTTCATAAGGAGTaGCAACATTGCACATCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: WSQVASCRISPRIPVPEFPLHKE*QHCTSP Trigger: TGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGG...AAATTCGGGGACTGGAATCCGCGGTGATATACGGCAGCTTGCCACCTGGGACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR TCA 72 bp | GTAACAACGACGAGCAGACAAAAGGCTGCTTCTTATTaGTGGGGGCTGTGCAGAACACATACCTCACCCGGA | + |
|
Preference number: 3 (lower is better) Translates to: VTTTSRQKAASY*WGLCRTHTSPG Trigger: TCCGGGTGAGGTATGTGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | AGCCATGCAAAGGTCAGGGGCTCATTCCTGCTGTACTaGCTGGCAAACTGTAACAACGACGAGCAGACAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SHAKVRGSFLLY*LANCNNDEQTK Trigger: TTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGAGCCCCTGACCTTTGCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CTTCATAAGGAGTTGCAACATTGCACATCTCCACAGTaGAAGAGACATGGGTGGCTTGTTTCCCCTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LHKELQHCTSPQ*KRHGWLVSPQA Trigger: AGCCTGAGGGGAAACAAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | AATAAAGCCAGGTCGTCTCGGTGCATTGTGGTAACCTaGCCCTCTTTAAAGTGTGAGCTGAATCTGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: NKARSSRCIVVT*PSLKCELNLPA Trigger: AGCTGGCAGATTCAGCTCACACTTTAAAGAGGGGCAGGTTACCACAATGCACCGAGACGACCTGGCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | ATTAAACTTTCTTGCTTGAGCAAGTTTGGTCCCAGGTaGCAAGCTGCCGTATATCACCGCGGATTCCAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: IKLSCLSKFGPR*QAAVYHRGFQS Trigger: GGACTGGAATCCGCGGTGATATACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CTGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTaGTTCTTATTGATGGGGGCTGTGCAGAACACATAC | + |
|
Preference number: 3 (lower is better) Translates to: LANCNNDEQTKG*FLLMGAVQNTY Trigger: GTATGTGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR TCA 72 bp | TTGCATGGATCATTGGGGTCATTAAACTTTCTTGCTTaGGCAAGTTTGGTCCCAGGTGGCAAGCTGCCGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LHGSLGSLNFLA*ASLVPGGKLPY Trigger: ATACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR TCA 72 bp | GCCCATCAACTTGTGCAAAGTCTACAAAAATATCAATaGGATTGGACAGCGTTGTCTCGGGGAGGTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AHQLVQSLQKYQ*DWTALSRGGGR Trigger: CCTACCACCTCCCCGAGACAACGCTGTCCAATCTCATTGATATTTTTGTAGACTTTGCACAAGTTGATGGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CATCTATCACTGCCACTTCATAAGGAGTTGCAACATTaGACATCTCCACAGTGCAAGAGACATGGGTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSLPLHKELQH*TSPQCKRHGWL Trigger: AAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGGCAGTGATAGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CAGAACACATACCTCACCCGGAGACTTAGTGGGATATaGTGGATCAGCTCTGCAGAGAACTTAAAATCATCC | + |
|
Preference number: 3 (lower is better) Translates to: QNTYLTRRLSGI*WISSAENLKSS Trigger: GGATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCATATCCCACTAAGTCTCCGGGTGAGGTATGTGTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CGTGACTCAGAGATTTTAATCAGCTTGGTGATGTTGTaGACGCCTTCTTGGATAATGGCATCCAGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: RDSEILISLVML*TPSWIMASSSF Trigger: GAAAGAGCTGGATGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTCACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | CATGCCAATTGCATCTGTGGCTACCAGGATCTTGCATaGATCATTGGGGTCATTAAACTTTCTTGCTTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: HANCICGYQDLA*IIGVIKLSCLS Trigger: GCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAGATCCTGGTAGCCACAGATGCAATTGGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | CTGGATTTCATCTATCACTGCCACTTCATAAGGAGTTaGAACATTGCACATCTCCACAGTGCAAGAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: LDFIYHCHFIRS*NIAHLHSARDM Trigger: CATGTCTCTTGCACTGTGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGGCAGTGATAGATGAAATCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | ACAAACAAACAAACAAACAAACCAGATAGTACAAGTTaGCCACAATCCTGCCTCAGGCAGAGAATGCCGTGT | + |
|
Preference number: 3 (lower is better) Translates to: TNKQTNKPDSTS*PQSCLRQRMPC Trigger: ACACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| 3UTR CCA 72 bp | AACACATACCTCACCCGGAGACTTAGTGGGATATGCTaGATCAGCTCTGCAGAGAACTTAAAATCATCCATA | + |
|
Preference number: 3 (lower is better) Translates to: NTYLTRRLSGIC*ISSAENLKSSI Trigger: TATGGATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCATATCCCACTAAGTCTCCGGGTGAGGTATGTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | GTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATaGCGTGTGCATAAGGATTTAAAATTGATTTTTATT | + |
|
Preference number: 3 (lower is better) Translates to: VQVGHNPASGRE*RVHKDLKLIFI Trigger: AATAAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| 3UTR GCA 72 bp | GAGAACTTAAAATCATCCATATTGCAGACAAAGTACTaGCCATCAACTTGTGCAAAGTCTACAAAAATATCA | + |
|
Preference number: 3 (lower is better) Translates to: ENLKSSILQTKY*PSTCAKSTKIS Trigger: TGATATTTTTGTAGACTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAATATGGATGATTTTAAGTTCTC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CAA 72 bp | GCACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTaGGAGGCTCCTGACAACCGTGACTGGTCCCCCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLVPRVLLAGL*EAPDNRDWSPD Trigger: ATCGGGGGACCAGTCACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCTCGGCGCTGGGACCCTaGGGCTTCACCGTCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECSALGP*GFTVSG Trigger: GCCGCTGACGGTGAAGCCTCAGGGTCCCAGCGCCGA...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTCACGCCAGAGGTCGCTaGCAGGTATCTCTGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRHARGR*QVSLDG Trigger: GCCATCCAGAGATACCTGTCAGCGACCTCTGGCGTG...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | CTCGGGGAGGTGGTAGGCAAACATCTCAATCTGCTCGGCAGTCGGGTGGAGACCTTGGTAGGGCCTGAGTaGAATATTATCTTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGEVVGKHLNLLGSRVETLVGPE*NIIFRC Trigger: ACAGCGGAAGATAATATTCCACTCAGGCCCTACCAA...GGTCTCCACCCGACTGCCGAGCAGATTGAGATGTTTGCCTACCACCTCCCCGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | CGTTGTCTCGGGGAGGTGGTAGGCAAACATCTCAATCTGCTCGGCAGTCGGGTGAAGCTTATGAAAGCCTaGTGGAAGAGACGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RCLGEVVGKHLNLLGSRVKLMKA*WKRRAS Trigger: TGATGCTCGTCTCTTCCACCAGGCTTTCATAAGCTT...CACCCGACTGCCGAGCAGATTGAGATGTTTGCCTACCACCTCCCCGAGACAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCGCAATCTGCAGGGCTTaGGAGGTGGTGATGGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECAICRA*EVVMGS Trigger: GGAGCCCATCACCACCTCCCAAGCCCTGCAGATTGC...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| 3UTR CAA 72 bp | AGGTCTTTAATATTCTTAGGCGGAAGCAGAGGCCACTaGATGTACCGGCGTAGCCATGCAAAGGTCAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSLIFLGGSRGH*MYRRSHAKVRG Trigger: GCCCCTGACCTTTGCATGGCTACGCCGGTACATCAAGTGGCCTCTGCTTCCGCCTAAGAATATTAAAGACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTTCGGCGCTGGGACCCTaGGGCTTCACCGTCAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFSALGP*GFTVSG Trigger: GCCGCTGACGGTGAAGCCTCAGGGTCCCAGCGCCGA...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | CCAATTGCATCTGTGGCTACCAGGATCTTGCATGGATCATTGGGGTCATTAAACCACGCCAGAGGTCGCTaGCAGGTATCTCTGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PIASVATRILHGSLGSLNHARGR*QVSLDG Trigger: GCCATCCAGAGATACCTGTCAGCGACCTCTGGCGTG...GTTTAATGACCCCAATGATCCATGCAAGATCCTGGTAGCCACAGATGCAATTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTATGCAGTCCCCAGGCTaGAGGTTGTCCAAAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRMQSPG*RLSKDS Trigger: GGAGTCTTTGGACAACCTTCAGCCTGGGGACTGCAT...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGGTGAGGAGTCCTTGCTaGACCAACCTAGAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPVRSPC*TNLEAR Trigger: CCTTGCCTCTAGGTTGGTGCAGCAAGGACTCCTCAC...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTCTGCCTGAGCATGTCTaGAGTGAGGAGTCCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRLPEHV*SEESLL Trigger: CAGCAAGGACTCCTCACTGCAGACATGCTCAGGCAG...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCGTCACTGGGGCTGAGTaGCTCTGTGGCCTTATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECVTGAE*LCGLIP Trigger: GGGAATAAGGCCACAGAGCCACTCAGCCCCAGTGAC...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTTCCAAGCCCATCCTCTaGCTGGGTCTCGAATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRSKPIL*LGLESS Trigger: AGATGATTCGAGACCCAGCCAGAGGATGGGCTTGGA...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAGCCCTAGCAGTGCTCTaGTCCAAGCCCATCCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGREALAVL*SKPILW Trigger: CCAGAGGATGGGCTTGGACCAGAGCACTGCTAGGGC...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCAAAGACTCCAGCGCATaGTCCAGCACAGAAATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECKDSSA*SSTEMG Trigger: CCCCATTTCTGTGCTGGATCATGCGCTGGAGTCTTT...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | GCTCATTCCTGCTGTACTGCCTGGCAAACTGTAACAACGACGAGCAGACAAAAGACCCCTGTAGAGTACTaGCAGCAGCATTGCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AHSCCTAWQTVTTTSRQKTPVEY*QQHCSS Trigger: AGAAGAGCAATGCTGCTGTCAGTACTCTACAGGGGT...CTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTGCACATCTCCACAGTaGAAGAGACATGGGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPCTSPQ*KRHGWL Trigger: AAGCCACCCATGTCTCTTGCACTGTGGAGATGTGCA...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATTCTCGCTGGGCTCTTaGAGGCTCCTGACAACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGREFSLGS*RLLTTV Trigger: CACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | GCGTTGTCTCGGGGAGGTGGTAGGCAAACATCTCAATCTGCTCGGCAGTCGGGTTACGTAGATCATCCTTaGATTCCAATACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ALSRGGGRQTSQSARQSGYVDHP*IPIQEI Trigger: TATTTCCTGTATTGGAATGCAAGGATGATCTACGTA...ACCCGACTGCCGAGCAGATTGAGATGTTTGCCTACCACCTCCCCGAGACAACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGGCACACCAGCAGCATTaGTCTTCTCAAAGATCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPAHQQH*SSQRSR Trigger: ACGAGATCTTTGAGAAGAGCAATGCTGCTGGTGTGC...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGCACTCCTTCTGGAGCTaGCTGAGCATGTCTGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQHSFWS*LSMSAV Trigger: CACTGCAGACATGCTCAGGCAGCTCCAGAAGGAGTG...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAACTGCTGTGTTCTGGCTaGTGTGTCAGCCACTCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRELLCSG*CVSHSF Trigger: GAAGGAGTGGCTGACACAGCAGCCAGAACACAGCAG...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGCTCTCTGCTGTGTTCTaGCTGCTGTGTCAGCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQLSAVF*LLCQPL Trigger: GAGTGGCTGACACAGCAGCCAGAACACAGCAGAGAG...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| 3UTR CAA 72 bp | CTTGCATGGATCATTGGGGTCATTAAACTTTCTTGCTaGAGCAAGTTTGGTCCCAGGTGGCAAGCTGCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: LAWIIGVIKLSC*SKFGPRWQAAV Trigger: TACGGCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATCAGGGGCTCATTCCTaGTGTACTGCCTGGCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRESGAHS*CTAWQT Trigger: AGTTTGCCAGGCAGTACAGCAGGAATGAGCCCCTGA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGAAGCTTATGAAAGCCTaGTGGAAGAGACGAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPKLMKA*WKRRAS Trigger: TGATGCTCGTCTCTTCCACCAGGCTTTCATAAGCTT...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTTTGGTAGGGCCTGAGTaGAATATTATCTTCCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRLVGPE*NIIFRC Trigger: ACAGCGGAAGATAATATTCCACTCAGGCCCTACCAA...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCAAGAGACATGGGTaGCTTGTTTCCCCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRECKRHG*LVSPQA Trigger: AGCCTGAGGGGAAACAAGCCACCCATGTCTCTTGCA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAAGCCCATCCTCTGGCTaGGTCTCGAATCATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRESPSSG*VSNHLD Trigger: ATCCAGATGATTCGAGACCCAGCCAGAGGATGGGCT...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTTTAAACTTTCTTGCTTaGGCAAGTTTGGTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRLNFLA*ASLVPG Trigger: ACCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAA...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGCCCCTCTTTAAAGTGTaGGCTGAATCTGCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQPLFKV*AESASS Trigger: AGAGCTGGCAGATTCAGCTCACACTTTAAAGAGGGG...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTATCGTCCACATGAGCTaGACTGAAGCAGATATCATT | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRIVHMS*TEADII Trigger: AATGATATCTGCTTCAGTGCAGCTCATGTGGACGAT...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTTTGCAGACAAAGTACTaGCCATCAACTTGTGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRLQTKY*PSTCAK Trigger: CTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAA...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGTGGCCTTATTCCCTaGACTTTTGGTGCCACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRECGLIP*TFGATC Trigger: ACACGTGGCACCAAAAGTGCAGGGAATAAGGCCACA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTGTATCCTCAAGTCACTaGTTTTACGTAGATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNQIVQVGHNPASGRECRVSSSH*FYVDHP Trigger: AGGATGATCTACGTAAAATCAGTGACTTGAGGATAC...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAACTGTTGGTAGGGCCTaGGTGGAATATTATCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRETVGRA*VEYYLP Trigger: CGGAAGATAATATTCCACTCAGGCCCTACCAACAGT...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | AGGAGCTCAGAGACCAGGTTAATAGCAGCAGACTCTCCACATAAATGGACTTCCATCGTCCACATGAGCTaGACTGAAGCAGATATCATT | + |
|
Preference number: 4 (lower is better) Translates to: RSSETRLIAADSPHKWTSIVHMS*TEADII Trigger: AATGATATCTGCTTCAGTGCAGCTCATGTGGACGAT...GGAAGTCCATTTATGTGGAGAGTCTGCTGCTATTAACCTGGTCTCTGAGCTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGGATTTCATCTATCACTaGCACTTCATAAGGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPDFIYH*HFIRSC Trigger: GCAACTCCTTATGAAGTGGCAGTGATAGATGAAATC...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGGTCATTAAACTTTCTTaGTTGAGCAAGTTTGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPVIKLS*LSKFGP Trigger: GGGACCAAACTTGCTCAAGCAAGAAAGTTTAATGAC...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAAGACTTAGTGGGATATaGTGGATCAGCTCTGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRERLSGI*WISSAE Trigger: CTCTGCAGAGCTGATCCAGCATATCCCACTAAGTCT...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR GCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGGAGCAGACAAAAGGCTaGTTCTTATTGATGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQEQTKG*FLLMGA Trigger: AGCCCCCATCAATAAGAAGCAGCCTTTTGTCTGCTC...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGGGTACCAGTTGGGTaGTATCCTCAAGTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGREWVPVG*YPQVTD Trigger: ATCAGTGACTTGAGGATACCACCCAACTGGTACCCA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCTCCTTCTCTCCCTTTTCATTGATGCTGGGCTTTATAAGGGAGTAAAATGGGTACCAGTTGGGTaGTATCCTCAAGTCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLSLFIDAGLYKGVKWVPVG*YPQVTD Trigger: ATCAGTGACTTGAGGATACCACCCAACTGGTACCCA...TTTTACTCCCTTATAAAGCCCAGCATCAATGAAAAGGGAGAGAAGGAGCTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGTGCCAATTGCATCTGTaGCTACCAGGATCTTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQCQLHL*LPGSCM Trigger: CATGCAAGATCCTGGTAGCCACAGATGCAATTGGCA...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAACTTAGTGGGATATGCTaGATCAGCTCTGCAGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRELSGIC*ISSAEN Trigger: GTTCTCTGCAGAGCTGATCCAGCATATCCCACTAAG...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| 3UTR CAA 72 bp | AGTCCCATGCCAATTGCATCTGTGGCTACCAGGATCTaGCATGGATCATTGGGGTCATTAAACTTTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPMPIASVATRI*HGSLGSLNFLA Trigger: AGCAAGAAAGTTTAATGACCCCAATGATCCATGCAAGATCCTGGTAGCCACAGATGCAATTGGCATGGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| 3UTR CAA 72 bp | TTGCGTGACTCAGAGATTTTAATCAGCTTGGTGATGTaGTGCACGCCTTCTTGGATAATGGCATCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRDSEILISLVM*CTPSWIMASSS Trigger: AGAGCTGGATGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTCACGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGGGGTCTCGAATCATCTaGATTTCATCTATCACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQGSRII*ISSITA Trigger: GGCAGTGATAGATGAAATCCAGATGATTCGAGACCC...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTTTGCTTGAGCAAGTTTaGTCCCAGGTGGCAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFLLEQV*SQVASC Trigger: GCAGCTTGCCACCTGGGACCAAACTTGCTCAAGCAA...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTAGCCTCTCATACTTCTaGACCTCTACTTCCTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFSLSYF*TSTSSP Trigger: TGGGGAGGAAGTAGAGGTTCAGAAGTATGAGAGGCT...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTAAGGCTGCTTCTTATTaGTGGGGGCTGTGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFKAASY*WGLCRT Trigger: TGTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTT...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTCTTCTGGGTACCAGTTaGGTGGTATCCTCAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFLLGTS*VVSSSH Trigger: GTGACTTGAGGATACCACCCAACTGGTACCCAGAAG...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTTCCTGCTGTACTGCCTaGCAAACTGTAACAACGACG | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFSCCTA*QTVTTT Trigger: CGTCGTTGTTACAGTTTGCCAGGCAGTACAGCAGGA...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGATCAAAGACGTCATaGACAGCTTCAAGATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQRSKTS*TASRSM Trigger: CATGGATCTTGAAGCTGTCCATGACGTCTTTGATCT...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| 3UTR CAA 72 bp | TTCAAAAGCTTGCGTGACTCAGAGATTTTAATCAGCTaGGTGATGTTGTGCACGCCTTCTTGGATAATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: FKSLRDSEILIS*VMLCTPSWIMA Trigger: TGCCATTATCCAAGAAGGCGTGCACAACATCACCAAGCTGATTAAAATCTCTGAGTCACGCAAGCTTTTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCTACGTAGATCATCCTTaGATTCCAATACAGGAAATA | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECYVDHP*IPIQEI Trigger: TATTTCCTGTATTGGAATGCAAGGATGATCTACGTA...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATACCAGGATCTTGCATaGATCATTGGGGTCATTAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGREYQDLA*IIGVIK Trigger: TTTAATGACCCCAATGATCCATGCAAGATCCTGGTA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCAACAAGGCTAGAGTCTaGAAACATATCAATAAATCG | + |
|
Preference number: 4 (lower is better) Translates to: QTNQIVQVGHNPASGRECNKARV*KHINKS Trigger: CGATTTATTGATATGTTTCCAGACTCTAGCCTTGTT...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
||
| CDS-3UTR TCA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGCTACAAAAATATCAATaGGATTGGACAGCGTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQLQKYQ*DWTALS Trigger: AGACAACGCTGTCCAATCTCATTGATATTTTTGTAG...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR GCA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAACTGCCCATCAACTTGTaGAAAGTCTACAAAAATATC | + |
|
Preference number: 4 (lower is better) Translates to: KQTNQIVQVGHNPASGRELPINL*KVYKNI Trigger: GATATTTTTGTAGACTTTGCACAAGTTGATGGGCAG...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR GCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTTCATTCCTGCTGTACTaGCTGGCAAACTGTAACAAC | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFSFLLY*LANCNN Trigger: GTTGTTACAGTTTGCCAGGCAGTACAGCAGGAATGA...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR TCA 90 bp | CTTAAAATCATCCATATTGCAGACAAAGTACTGCCCATCAACTTGTGCAAAGTCGTATCCTCAAGTCACTaGTTTTACGTAGATCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKIIHIADKVLPINLCKVVSSSH*FYVDHP Trigger: AGGATGATCTACGTAAAATCAGTGACTTGAGGATAC...GACTTTGCACAAGTTGATGGGCAGTACTTTGTCTGCAATATGGATGATTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS-3UTR GCA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTATGCTGGATCAGCTCTaGAGAGAACTTAAAATCATC | + |
|
Preference number: 4 (lower is better) Translates to: NPASGRECRVHKDLKLIFMLDQL*RELKII Trigger: GATGATTTTAAGTTCTCTGCAGAGCTGATCCAGCAT...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTGCAAGGGGCAGCTCCTaGTCACTGGGGCTGAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TNQIVQVGHNPASGRECRARGSS*SLGLSG Trigger: GCCACTCAGCCCCAGTGACAAGGAGCTGCCCCTTGC...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS GCA 90 bp | CCCTGTAGAGTACTGACAGCAGCATTGCTCTTCTCAAAGATCTCGTaGGCCAGCAGTTTTAGAGGACCGCAGTACACGCCAGAGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PCRVLTAALLFSKIS*ASSFRGPQYTPEVA Trigger: AGCGACCTCTGGCGTGTACTGCGGTCCTCTAAAACTGCTGGCGCACGAGATCTTTGAGAAGAGCAATGCTGCTGTCAGTACTCTACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGCTTCTCGCTGGGCTCTaGGAGGCTCCTGACAACCGT | + |
|
Preference number: 5 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPLLAGL*EAPDNR Trigger: ACGGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAG...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTAGAGACATGGGTGGCTaGTTTCCCCTCAGGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TNQIVQVGHNPASGRECRRDMGG*FPLRLH Trigger: GTGGAGCCTGAGGGGAAACAAGCCACCCATGTCTCT...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS TCA 90 bp | GTATCTCTGGATGGCATGGTAAGTCTTCCCACTGTTGGTAGGGCCTaGGTGGAATATTATCTTCCGCTGTCTCGCTCTGGCTTCTGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VSLDGMVSLPTVGRA*VEYYLPLSRSGFWV Trigger: TACCCAGAAGCCAGAGCGAGACAGCGGAAGATAATATTCCACTCAGGCCCTACCAACAGTGGGAAGACTTACCATGCCATCCAGAGATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | CACTTTTGGTGCCACGTGTCCTTCTCGCTGGGCTCTTGGAGGCTCCTGACAACCGTCAGCACTCAGCTTTaGAATTTCTTGCCTCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: HFWCHVSFSLGSWRLLTTVSTQL*NFLPLI Trigger: TATAAGAGGCAAGAAATTCAAAAGCTGAGTGCTGAC...GGTTGTCAGGAGCCTCCAAGAGCCCAGCGAGAAGGACACGTGGCACCAAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | ACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTAAAGGCTGCTTCTTATaGATGGGGGCTGTGCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TNQIVQVGHNPASGRECRKGCFL*MGAVQN Trigger: GTTCTGCACAGCCCCCATCAATAAGAAGCAGCCTTT...ACGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | CAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCTTCTTTACTTCATTCTaGTCTAGAGGCCGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QTNQIVQVGHNPASGRECFFTSF*SRGRVS Trigger: GCTCACTCGGCCTCTAGACAAGAATGAAGTAAAGAA...GCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | CTGGCAAACTGTAACAACGACGAGCAGACAAAAGGCTGCTTCTTATTGATGGGGTTCTTTACTTCATTCTaGTCTAGAGGCCGAGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LANCNNDEQTKGCFLLMGFFTSF*SRGRVS Trigger: GCTCACTCGGCCTCTAGACAAGAATGAAGTAAAGAA...CCCCATCAATAAGAAGCAGCCTTTTGTCTGCTCGTCGTTGTTACAGTTTGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGGTACTGACAGCAGCATaGCTCTTCTCAAAGATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQVLTAA*LFSKIS Trigger: CGAGATCTTTGAGAAGAGCAATGCTGCTGTCAGTAC...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | AACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATGCCGTTACGTAGATCATCCTaGCATTCCAATACAGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: NKPDSTSWPQSCLRQRMPLRRSS*HSNTGN Trigger: ATTTCCTGTATTGGAATGCAAGGATGATCTACGTAA...CGGCATTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS TCA 90 bp | TCGCTCTGGCTTCTGGGTACCAGTTGGGTGGTATCCTCAAGTCACTaGTTTTACGTAGATCATCCTTGCATTCCAATACAGGAAATATTT | + |
|
Preference number: 5 (lower is better) Translates to: SLWLLGTSWVVSSSH*FYVDHPCIPIQEIF Trigger: AAATATTTCCTGTATTGGAATGCAAGGATGATCTACGTAAAATCAGTGACTTGAGGATACCACCCAACTGGTACCCAGAAGCCAGAGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGATTAAACTTTCTTGCTaGAGCAAGTTTGGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQIKLSC*SKFGPR Trigger: CCTGGGACCAAACTTGCTCAAGCAAGAAAGTTTAAT...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATTCTCTCCCTTTTCATaGATGCTGGGCTTTATAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KQTNQIVQVGHNPASGREFSPFS*MLGFIR Trigger: CCTTATAAAGCCCAGCATCAATGAAAAGGGAGAGAA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGGTCAGCACTCAGCTTTaGAATTTCTTGCCTCTTATA | + |
|
Preference number: 5 (lower is better) Translates to: KQTNKPDSTSWPQSCLRQVSTQL*NFLPLI Trigger: TATAAGAGGCAAGAAATTCAAAAGCTGAGTGCTGAC...CTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAGTACTGCCCATCAACTaGTGCAAAGTCTACAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KQTNQIVQVGHNPASGREVLPIN*CKVYKN Trigger: ATTTTTGTAGACTTTGCACAAGTTGATGGGCAGTAC...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAATCCAGATTCAAAAGCTaGCGTGACTCAGAGATTTTA | + |
|
Preference number: 5 (lower is better) Translates to: KQTNQIVQVGHNPASGRESRFKS*RDSEIL Trigger: TAAAATCTCTGAGTCACGCAAGCTTTTGAATCTGGA...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | AATCCTGCCTCAGGCAGAGAATGCCGTGTGCATAAGGATTTAAAATTGATTTTTCCACTTCATAAGGAGTaGCAACATTGCACATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NPASGRECRVHKDLKLIFPLHKE*QHCTSP Trigger: TGGAGATGTGCAATGTTGCAACTCCTTATGAAGTGG...AAAAATCAATTTTAAATCCTTATGCACACGGCATTCTCTGCCTGAGGCAGGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS-3UTR CAA 90 bp | AAACAAACAAACCAGATAGTACAAGTTGGCCACAATCCTGCCTCAGGCAGAGAAATCTTGCATGGATCATaGGGGTCATTAAACTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KQTNQIVQVGHNPASGREILHGS*GSLNFL Trigger: AAGAAAGTTTAATGACCCCAATGATCCATGCAAGAT...TTCTCTGCCTGAGGCAGGATTGTGGCCAACTTGTACTATCTGGTTTGTTTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS TCA 72 bp | GGCAGAGGAGGAGGCGGCCAAGCAGGGAACGCGTCCTaGAGCCCCCGGGAACGACCCCACGAGAGCGCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GRGGGGQAGNAS*SPRERPHESAK Trigger: CTTCGCGCTCTCGTGGGGTCGTTCCCGGGGGCTTCAGGACGCGTTCCCTGCTTGGCCGCCTCCTCCTCTGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 90 bp | AGCCGCTCTTCACCTGTCACCAAGTCACACGGCACACCAGCAGCATaGCTCTTCTCAAAGATCTCGTGCGCCAGCAGTTTTAGAGGACCG | + |
|
Preference number: 6 (lower is better) Translates to: SRSSPVTKSHGTPAA*LFSKISCASSFRGP Trigger: CGGTCCTCTAAAACTGCTGGCGCACGAGATCTTTGAGAAGAGCAATGCTGCTGGTGTGCCGTGTGACTTGGTGACAGGTGAAGAGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020273.16 |
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| CDS TCA 72 bp | GATGGCATGGTAAGTCTTCCCACTGTTGGTAGGGCCTaGGTGGAATATTATCTTCCGCTGTCTCGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: DGMVSLPTVGRA*VEYYLPLSRSG Trigger: GCCAGAGCGAGACAGCGGAAGATAATATTCCACTCAGGCCCTACCAACAGTGGGAAGACTTACCATGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS GCA 72 bp | GTACTGACAGCAGCATTGCTCTTCTCAAAGATCTCGTaGGCCAGCAGTTTTAGAGGACCGCAGTACACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VLTAALLFSKIS*ASSFRGPQYTP Trigger: TGGCGTGTACTGCGGTCCTCTAAAACTGCTGGCGCACGAGATCTTTGAGAAGAGCAATGCTGCTGTCAGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS CCA 72 bp | GGCCTGAGTGGAATATTATCTTCCGCTGTCTCGCTCTaGCTTCTGGGTACCAGTTGGGTGGTATCCTCAAGT | + |
|
Preference number: 6 (lower is better) Translates to: GLSGILSSAVSL*LLGTSWVVSSS Trigger: ACTTGAGGATACCACCCAACTGGTACCCAGAAGCCAGAGCGAGACAGCGGAAGATAATATTCCACTCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 72 bp | CACACGGCACACCCCTGTAGAGTACTGACAGCAGCATaGCTCTTCTCAAAGATCTCGTGCGCCAGCAGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HTAHPCRVLTAA*LFSKISCASSF Trigger: AAAACTGCTGGCGCACGAGATCTTTGAGAAGAGCAATGCTGCTGTCAGTACTCTACAGGGGTGTGCCGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162023.2 |
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| CDS TCA 72 bp | CTTCTGGGTACCAGTTGGGTGGTATCCTCAAGTCACTaGTTTTACGTAGATCATCCTTGCATTCCAATACAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGTSWVVSSSH*FYVDHPCIPIQ Trigger: CTGTATTGGAATGCAAGGATGATCTACGTAAAATCAGTGACTTGAGGATACCACCCAACTGGTACCCAGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 72 bp | CAGGACAATGTGAATGTCCACGTCCAGAGAATGGGATaGCATAATGTAATTCCTGAAGCTTATGAAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: QDNVNVHVQRMG*HNVIPEAYESL Trigger: CAGGCTTTCATAAGCTTCAGGAATTACATTATGCAATCCCATTCTCTGGACGTGGACATTCACATTGTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 90 bp | GATATCATTCAGGACAATGTGAATGTCCACGTCCAGAGAATGGGATaGCATAATGTAATTCCTGAAGCTTATGAAAGCCTGGTGGAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DIIQDNVNVHVQRMG*HNVIPEAYESLVEE Trigger: CTCTTCCACCAGGCTTTCATAAGCTTCAGGAATTACATTATGCAATCCCATTCTCTGGACGTGGACATTCACATTGTCCTGAATGATATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS TCA 72 bp | GCATGTCTCAAGAAAAATGGAAATAAATCGTCCACATaGGCTGCACTGAAGCAGATATCATTCAGGACAATG | + |
|
Preference number: 6 (lower is better) Translates to: ACLKKNGNKSST*AALKQISFRTM Trigger: CATTGTCCTGAATGATATCTGCTTCAGTGCAGCTCATGTGGACGATTTATTTCCATTTTTCTTGAGACATGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 90 bp | CAGTTGGGTGGTATCCTCAAGTCACTGATTTTACGTAGATCATCCTaGCATTCCAATACAGGAAATATTTGTTTGGCATGTCTCAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLGGILKSLILRRSS*HSNTGNICLACLKK Trigger: TTTCTTGAGACATGCCAAACAAATATTTCCTGTATTGGAATGCAAGGATGATCTACGTAAAATCAGTGACTTGAGGATACCACCCAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS TCA 72 bp | AGAAAAATGGAAATAAATCGTCCACATGAGCTGCACTaGAGCAGATATCATTCAGGACAATGTGAATGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RKMEINRPHELH*SRYHSGQCECP Trigger: TGGACATTCACATTGTCCTGAATGATATCTGCTTCAGTGCAGCTCATGTGGACGATTTATTTCCATTTTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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| CDS CAA 72 bp | GGTATCCTCAAGTCACTGATTTTACGTAGATCATCCTaGCATTCCAATACAGGAAATATTTGTTTGGCATGT | + |
|
Preference number: 6 (lower is better) Translates to: GILKSLILRRSS*HSNTGNICLAC Trigger: ACATGCCAAACAAATATTTCCTGTATTGGAATGCAAGGATGATCTACGTAAAATCAGTGACTTGAGGATACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020273.16 ENSMUST00000162023.2 |
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