RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SUPT6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002052

Ensembl transcript IDs: ENSMUST00000002121.5

Found 309 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTaGCAGCCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCC +
Preference number: 1 (lower is better)
Translates to: AGSSALLHMALTVLL*QPRSCHQDQSYFPS
Trigger: GGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 90 bp CAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTaGTTTGACAGCCAAGGTCTTGCCATCAGGATCAGAGCTACTTTC +
Preference number: 1 (lower is better)
Translates to: QGLAAQHCSTWPSQS*FDSQGLAIRIRATF
Trigger: GAAAGTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR TCA 90 bp GCTGCTCGGTGCACACCAGCTCACAAGGCCACCATCCAGCCAGGCTaGCCACTAAAAAGAACGTCATTTCACGCCACTTTATGGACAAAA +
Preference number: 1 (lower is better)
Translates to: AARCTPAHKATIQPG*PLKRTSFHATLWTK
Trigger: TTTTGTCCATAAAGTGGCGTGAAATGACGTTCTTTTTAGTGGTCAGCCTGGCTGGATGGTGGCCTTGTGAGCTGGTGTGCACCGAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR TCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAAAGAGGGGCAGGGAGTaGGGCCATAAGTGGCCAGGC +
Preference number: 2 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSKRGRE*GHKWPG
Trigger: GCCTGGCCACTTATGGCCTCACTCCCTGCCCCTCTT...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR TCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTGAGCTGCATGCCTCATaGGGGCCTGTCTCAGGTGAG +
Preference number: 2 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSELHAS*GPVSGE
Trigger: CTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTC...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CCA 90 bp GCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTACTGCTCTCCCAGCCTaGCCCCAGAACAGGTGGTTA +
Preference number: 2 (lower is better)
Translates to: AGRGWQLSTAPHGPHSPATALPA*PQNRWL
Trigger: TAACCACCTGTTCTGGGGCCAGGCTGGGAGAGCAGT...AGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR TCA 90 bp GCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTCCTCCTGCCCCAAACTaGATAAATAGCATCGGTGTC +
Preference number: 2 (lower is better)
Translates to: AGRGWQLSTAPHGPHSPAPPAPN*INSIGV
Trigger: GACACCGATGCTATTTATTCAGTTTGGGGCAGGAGG...AGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR TCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCACTCACAGTCCTGCTTTaGCAGCCAAGGTCTTGCCAT +
Preference number: 2 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSLTVLL*QPRSCH
Trigger: ATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAG...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 90 bp GGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTaGACAGCCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTC +
Preference number: 2 (lower is better)
Translates to: GWQLSTAPHGPHSPA*TAKVLPSGSELLSL
Trigger: GAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTGGCCCCAGAACAGGTaGTTAGCACAAGCCCGGAGT +
Preference number: 2 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDWPQNR*LAQARS
Trigger: ACTCCGGGCTTGTGCTAACCACCTGTTCTGGGGCCA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGTGTCCCCACACAGGCTaGGGACATAGACAATTGAGC +
Preference number: 2 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRCPHTG*GHRQLS
Trigger: GCTCAATTGTCTATGTCCCCAGCCTGTGTGGGGACA...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 90 bp ACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTaGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAA +
Preference number: 2 (lower is better)
Translates to: TAPHGPHSPALTAKV*PSGSELLSLLPQTE
Trigger: TTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR GCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTAGACTGCTCCACCTTTaGTCTCCTCCCTGCCATACT +
Preference number: 2 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIRLLHL*SPPCHT
Trigger: AGTATGGCAGGGAGGAGAGCAAAGGTGGAGCAGTCT...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCCAGCACTGCTCCACATaGCCCTCACAGTCCTGCTTT +
Preference number: 2 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVQHCST*PSQSCF
Trigger: AAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTG...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 72 bp TTAGCACAAGCCCGGAGTGGAACAGCTGCTGCTCGGTaGACACCAGCTCACAAGGCCACCATCCAGCCAGGC +
Preference number: 3 (lower is better)
Translates to: LAQARSGTAAAR*TPAHKATIQPG
Trigger: GCCTGGCTGGATGGTGGCCTTGTGAGCTGGTGTGCACCGAGCAGCAGCTGTTCCACTCCGGGCTTGTGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CCA 72 bp GGCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATaGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTT +
Preference number: 3 (lower is better)
Translates to: GRQGLAAQHCST*PSQSCFDSQGL
Trigger: AAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CCA 72 bp CTGGCCCCAGAACAGGTGGTTAGCACAAGCCCGGAGTaGAACAGCTGCTGCTCGGTGCACACCAGCTCACAA +
Preference number: 3 (lower is better)
Translates to: LAPEQVVSTSPE*NSCCSVHTSSQ
Trigger: TTGTGAGCTGGTGTGCACCGAGCAGCAGCTGTTCCACTCCGGGCTTGTGCTAACCACCTGTTCTGGGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CCA 72 bp TGCCATACTGCTCTCCCAGCCTGGCCCCAGAACAGGTaGTTAGCACAAGCCCGGAGTGGAACAGCTGCTGCT +
Preference number: 3 (lower is better)
Translates to: CHTALPAWPQNR*LAQARSGTAAA
Trigger: AGCAGCAGCTGTTCCACTCCGGGCTTGTGCTAACCACCTGTTCTGGGGCCAGGCTGGGAGAGCAGTATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 72 bp GAACAGGTGGTTAGCACAAGCCCGGAGTGGAACAGCTaGTGCTCGGTGCACACCAGCTCACAAGGCCACCAT +
Preference number: 3 (lower is better)
Translates to: EQVVSTSPEWNS*CSVHTSSQGHH
Trigger: ATGGTGGCCTTGTGAGCTGGTGTGCACCGAGCAGCAGCTGTTCCACTCCGGGCTTGTGCTAACCACCTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 72 bp TGTCCCCACACAGGCTGGGGACATAGACAATTGAGCTaGATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCT +
Preference number: 3 (lower is better)
Translates to: CPHTGWGHRQLS*MPHEGLSQVRA
Trigger: AGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCTATGTCCCCAGCCTGTGTGGGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CAA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTAAGTGGCCAGGCCTCTaGGGAGCTTCAGAGGTAACC +
Preference number: 3 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIKWPGL*GASEVT
Trigger: GGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCACTT...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 72 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTaGTTTGACAGCCAAGGTCTTGCCATCAGGATCAGA +
Preference number: 3 (lower is better)
Translates to: AAQHCSTWPSQS*FDSQGLAIRIR
Trigger: TCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR TCA 72 bp TCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTaGCAGCCAAGGTCTTGCCATCAGGATCAGAGCTAC +
Preference number: 3 (lower is better)
Translates to: SALLHMALTVLL*QPRSCHQDQSY
Trigger: GTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR GCA 72 bp CTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTaGTCCACCTTTGCTCTCCTCCCTGCCATACTGCTC +
Preference number: 3 (lower is better)
Translates to: LSQVRASRDITD*STFALLPAILL
Trigger: GAGCAGTATGGCAGGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR TCA 72 bp ATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTaGATAAATAGCATCGGTGTCCCCACACAGGCTGGG +
Preference number: 3 (lower is better)
Translates to: IRIRATFPPAPN*INSIGVPTQAG
Trigger: CCCAGCCTGTGTGGGGACACCGATGCTATTTATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTATGAGAGGAAGTTTTaGGAGCTTCAAACTGCTGAA +
Preference number: 3 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVYERKF*ELQTAE
Trigger: TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTGTCTCAGCACCTGTCTaGCAAGGGGCTCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: AGRGWQLSTAPHGPHSPAVSAPV*QGAPWQ
Trigger: TTGCCAGGGAGCCCCTTGTCAGACAGGTGCTGAGAC...AGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCTCTCGGCGGGAGGCTTaGTTGAGCTCTGGTCCCCTC +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPSRREA*LSSGPL
Trigger: GAGGGGACCAGAGCTCAAGCAAGCCTCCCGCCGAGA...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCCATACTGGCTGGATaGCCACTGGGCTGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASAILAG*PLGWGS
Trigger: GCTACCCCAGCCCAGTGGGCATCCAGCCAGTATGGC...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCTGCTGCCTCCTCCGCTaGCACCGTAGCCATACTGGC +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASCCLLR*HRSHTG
Trigger: GCCAGTATGGCTACGGTGGCAGCGGAGGAGGCAGCA...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCACAATGGACATGGGGGTaGTCTCGATCATGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSQWTWG*SRSWGW
Trigger: CCAGCCCCATGATCGAGAGCACCCCCATGTCCATTG...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTCTCAGCTGCCTTGACTaGGATGGAGCGGAGCTGGAA +
Preference number: 4 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSLSCLD*DGAELE
Trigger: TTCCAGCTCCGCTCCATCCCAGTCAAGGCAGCTGAG...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAATAGCTCTCACCCTGTaGGCGCCTGTGAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSIALTL*APVSNA
Trigger: GGCATTGCTCACAGGCGCCCACAGGGTGAGAGCTAT...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAACTGTGGGGTGGTGCTaGCCTGGAGCTGGTGGTATT +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSTVGWC*PGAGGI
Trigger: AATACCACCAGCTCCAGGCCAGCACCACCCCACAGT...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTTCGCATCGCCAGCAATaGACATGGGGGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSSHRQQ*TWGCSR
Trigger: TCGAGAGCACCCCCATGTCCATTGCTGGCGATGCGA...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCCATTGTCCTGGTCTGTaGGGTGGCTGCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPHCPGL*GGCSPA
Trigger: AGCTGGAGAGCAGCCACCTCACAGACCAGGACAATG...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCCCTGTGGGCGCCTGTaGGCAATGCCGGTAACATTG +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKPCGRL*AMPVTL
Trigger: CAATGTTACCGGCATTGCTCACAGGCGCCCACAGGG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTTCCTGGTCTGTGAGGTaGCTGCTCTCCAGCTCACTA +
Preference number: 4 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSSWSVR*LLSSSL
Trigger: TAGTGAGCTGGAGAGCAGCCACCTCACAGACCAGGA...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCGGCACCTCAAAATGCTaGTTCCGCATGAAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPGTSKC*FRMKPR
Trigger: CCTGGGCTTCATGCGGAATCAGCATTTTGAGGTGCC...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTCCTTGGTCCAGCTCATaGACTATCCGCTTCACATCC +
Preference number: 4 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSPWSSS*TIRFTS
Trigger: GGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGG...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGGGTTTACCCCGGGGCTaGTATCCCAGGAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKGLPRG*YPRRNL
Trigger: CAAGTTCCTCCTGGGATACCAGCCCCGGGGTAAACC...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCCACTGGCTGCTGGGCTaGTGTTGGGAACACATGGTA +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPHWLLG*CWEHMV
Trigger: TACCATGTGTTCCCAACACCAGCCCAGCAGCCAGTG...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGGGGGTGGTGCTGGCCTaGAGCTGGTGGTATTGTGGG +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRGVVLA*SWWYCG
Trigger: CCCACAATACCACCAGCTCCAGGCCAGCACCACCCC...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCGCCGTTGTCGGGAGCTaGAGGAAGGCTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLAVVGS*RKAGAG
Trigger: CCCAGCCCCAGCCTTCCTCCAGCTCCCGACAACGGC...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCCGCCAGCAATGGACATaGGGGTGCTCTCGATCATGG +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASRQQWT*GCSRSW
Trigger: CCATGATCGAGAGCACCCCCATGTCCATTGCTGGCG...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGGCCAACATCGTCTTCTaGGTCCCCAGAGTCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRANIVF*VPRVAA
Trigger: GGCAGCGACTCTGGGGACTCAGAAGACGATGTTGGC...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTCCTGTCCATGAGGTCTaGGGTCCGGCAGGTCAGGTC +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFPVHEV*GPAGQV
Trigger: GACCTGACCTGCCGGACCTCAGACCTCATGGACAGG...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGGGTAGATGCCAGCACTaGCTTTCCAGGTCACCGTCA +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKGRCQH*LSRSPS
Trigger: TGACGGTGACCTGGAAAGTCAGTGCTGGCATCTACC...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTGAGTGGCTCCCAGGCTaGAGGCGTTCTCCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIEWLPG*RRSPCP
Trigger: AGGGCAAGGAGAACGCCTTCAGCCTGGGAGCCACTC...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCCAGCATTCTGCATCTTaGGGATGTCACGCCCGTAGT +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPQHSAS*GCHARS
Trigger: ACTACGGGCGTGACATCCCCAAGATGCAGAATGCTG...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCGGCACTCTGGCAGATaGTATACATGTCTCGGCGGG +
Preference number: 4 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGRHSGR*YTCLGG
Trigger: CCCGCCGAGACATGTATACCATCTGCCAGAGTGCCG...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCTCTACCTGCTGATCTaGACGGTAGGGTGCCACTCT +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKLYLLI*TVGCHS
Trigger: AGAGTGGCACCCTACCGTCCAGATCAGCAGGTAGAG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCCGCCGCTTGGTAAAATaGGGCAGGCGGAGGAAATCA +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASRRLVK*GRRRKS
Trigger: TGATTTCCTCCGCCTGCCCCATTTTACCAAGCGGCG...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGGAGCAAAGGAAGCCATaGGCTGGACATAGCGGGCAA +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKEQRKP*AGHSGQ
Trigger: TTGCCCGCTATGTCCAGCCCATGGCTTCCTTTGCTC...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTCGTAGCCATACTGGCTaGATGCCCACTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFRSHTG*MPTGLG
Trigger: CCCCAGCCCAGTGGGCATCCAGCCAGTATGGCTACG...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGAGCTGGAGGAAGGCTaGGGCTGGGCCTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFELEEG*GWACVD
Trigger: GTCTACACAGGCCCAGCCCCAGCCTTCCTCCAGCTC...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTCACATGGTGACCAGCTaGGTCCGGCTCTCGAGTCGA +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIHMVTS*VRLSSR
Trigger: TCGACTCGAGAGCCGGACTCAGCTGGTCACCATGTG...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAGGCACTGAACATCTGTaGAGTCATGTTCTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSGTEHL*SHVLRQ
Trigger: TTGCCTCAGAACATGACTTCACAGATGTTCAGTGCC...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCCATCCTCCTTTATaGGTTTCAGCTTCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKRHPPL*VSASSG
Trigger: GCCGGAAGAAGCTGAAACGCATAAAGGAGGATGGCG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCGGCTCTGCAGGGAACTaGTCTGTCTCGTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLGSAGN*SVSWRW
Trigger: CCAGCGCCACGAGACAGAGCAGTTCCCTGCAGAGCC...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCAGCTCCAAAGGCTCTaGAGGGAACTGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGQLQRL*RELLCL
Trigger: GAGACAGAGCAGTTCCCTGCAGAGCCTTTGGAGCTG...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTGGCTTGCTTGAGCTCTaGTCCCCTCTGTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGGLLEL*SPLFLI
Trigger: GATGAGGAACAGAGGGGACCAGAGCTCAAGCAAGCC...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCGAGTCCATTCACAGTTaGGAAAATCTGGCCCCGGTA +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPESIHS*ENLAPV
Trigger: TACCGGGGCCAGATTTTCCCAACTGTGAATGGACTC...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTGGCCTGGAGCTGGTaGTATTGTGGGGTGGTAATG +
Preference number: 4 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGLAWSW*YCGVVM
Trigger: CATTACCACCCCACAATACCACCAGCTCCAGGCCAG...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGGTGCTGGCCTGGAGCTaGTGGTATTGTGGGGTGGTA +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRVLAWS*WYCGVV
Trigger: TACCACCCCACAATACCACCAGCTCCAGGCCAGCAC...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCGGCCTGTGTAGACTGTaGGGTGGTGCTGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLGLCRL*GGAGLE
Trigger: CTCCAGGCCAGCACCACCCCACAGTCTACACAGGCC...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCGCTGGGAGAGGGTCGTaGGGTCAGCCGCTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLAGRGS*GQPLFL
Trigger: CAGAAACAGCGGCTGACCCCACGACCCTCTCCCAGC...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGATCTCGATCATGGGGCTaGGAGAGGGTCGTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRSRSWG*ERVVGS
Trigger: TGACCCCACGACCCTCTCCCAGCCCCATGATCGAGA...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 72 bp CATCGGTGTCCCCACACAGGCTGGGGACATAGACAATaGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: HRCPHTGWGHRQ*SCMPHEGLSQV
Trigger: CACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCTATGTCCCCAGCCTGTGTGGGGACACCGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGCCCTCCACAGGTCATTaGTGTGCAGCTCAGGTTCCA +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRPSTGH*CAAQVP
Trigger: TGGAACCTGAGCTGCACATCAATGACCTGTGGAGGG...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAGCAAGGGATGAAACTTaGGACACAGGATGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSARDET*DTGCLH
Trigger: ATGAAGACATCCTGTGTCTCAAGTTTCATCCCTTGC...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCGGGCAATGGCACGGTTaGCATCCACCCCGACCTCAT +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLGQWHG*HPPRPH
Trigger: ATGAGGTCGGGGTGGATGTCAACCGTGCCATTGCCC...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGGGGAAGTTGTCTTGTTaGCAGAAGGGGCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRGKLSC*QKGHCH
Trigger: GTGGCAGTGCCCCTTCTGTCAACAAGACAACTTCCC...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCGTGTTAGGTTCTCTTTaGGGATTCTCAGCTGAGTCC +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPVLGSL*GFSAES
Trigger: GGACTCAGCTGAGAATCCGCAAAGAGAACCTAACAC...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGAGCCCGTGTGAGATCTaGAAGATTGATGTTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKSPCEI*KIDVGW
Trigger: CCAGCCAACATCAATCTTGCAGATCTCACACGGGCT...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCGACTTTGGCTGCTGTTaGCGTTGTCGGGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPDFGCC*RCRELE
Trigger: CTCCAGCTCCCGACAACGGCAACAGCAGCCAAAGTC...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAACACCGAAGATCTCCTaGGCTTCCTGCAGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRTPKIS*ASCRAA
Trigger: TGCAGCCCTGCAGGAAGCCCAGGAGATCTTCGGTGT...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTTTGTCTCAAAACTGGTaGATAATCCCGGAACTCTGC +
Preference number: 4 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSLSQNW*IIPELC
Trigger: GCAGAGTTCCGGGATTATCCACCAGTTTTGAGACAA...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCCAGGTCACCGTCAGATaGTTTTCACCTTTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPQVTVR*FSPLLL
Trigger: CAGCAGTAAAGGTGAAAACCATCTGACGGTGACCTG...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTAAGATTGATGTTGGCTaGGGTAGCATTGATAGAAGC +
Preference number: 4 (lower is better)
Translates to: AGRGWQLSTAPHGPHSPAKIDVG*GSIDRS
Trigger: GCTTCTATCAATGCTACCCCAGCCAACATCAATCTT...AGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTCTGCTGGGCTGGTGTTaGGAACACATGGTAGGCGCT +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDILLGWC*EHMVGA
Trigger: AGCGCCTACCATGTGTTCCCAACACCAGCCCAGCAG...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATGAGGAAGGCTGGGGCTaGGCCTGTGTAGACTGTGGG +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNEEGWG*ACVDCG
Trigger: CCCACAGTCTACACAGGCCCAGCCCCAGCCTTCCTC...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCCATCTCGTCCAGGAGTaGGGTCGCATCGCCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPHLVQE*GRIASN
Trigger: ATTGCTGGCGATGCGACCCCACTCCTGGACGAGATG...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 72 bp CATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTaGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HGPHSPALTAKV*PSGSELLSLLP
Trigger: GGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCGAAATCGTCAATGTCTaGCTCCTCATCATCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPEIVNV*LLIIFL
Trigger: GAGGAAGATGATGAGGAGTCAGACATTGACGATTTC...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATCATCCTCAGCTGCCTTaGCTGGGATGGAGCGGAGCT +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNHPQLP*LGWSGA
Trigger: AGCTCCGCTCCATCCCAGTCAAGGCAGCTGAGGATG...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTAGCCCAGGGCCTCTTTaGTCTTCTGAACTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDISPGPL*SSELCW
Trigger: CCAGCACAGTTCAGAAGATCAAAGAGGCCCTGGGCT...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCAAGCAGTGTCGATCTTaGGGAAGCCAGCACAATTCA +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASKQCRS*GSQHNS
Trigger: TGAATTGTGCTGGCTTCCTCAAGATCGACACTGCTT...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCAAATTCCTCACTGTTaGTCCAAAGAGTGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKQIPHC*SKEWLP
Trigger: TGGGAGCCACTCTTTGGATCAACAGTGAGGAATTTG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTACTGCTACTGGGAGTaGTGCCTGGTACAGGATCCT +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDYCYWE*CLVQDP
Trigger: AGGATCCTGTACCAGGCATCACTCCCAGTAGCAGTA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACAGGTTCTCCCCAAACTaGTCAGGTGTGAGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDRFSPN*SGVRPN
Trigger: GTTTGGCCTCACACCTGAGCAGTTTGGGGAGAACCT...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGCAGAGGAGAAAGCAATaGCTAGGACTCGGATGCCCT +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRQRRKQ*LGLGCP
Trigger: AGGGCATCCGAGTCCTAGGCATTGCTTTCTCCTCTG...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCACTGCCTCTGATTTCTTaGTGTTCATGTACAGAATGG +
Preference number: 4 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSLPLIS*CSCTEW
Trigger: CCATTCTGTACATGAACAGCAAGAAATCAGAGGCAG...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTCACACGTTTCTTGGTaGTCTTCTTGGGGCGCACTC +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDSHVSW*SSWGAL
Trigger: GAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCTCTCAGGCAAGTCAGTaGCTCGGATTTCATTGTCCT +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASSQASQ*LGFHCP
Trigger: AGGACAATGAAATCCGAGCCACTGACTTGCCTGAGA...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCAGCTTGTCTCAAAACTaGTGGATAATCCCGGAACTC +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPSLSQN*WIIPEL
Trigger: GAGTTCCGGGATTATCCACCAGTTTTGAGACAAGCT...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTCTATCAGAGGGTCTTaGATACGCCGGGCTAGAGAG +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDSIRGS*IRRARE
Trigger: CTCTCTAGCCCGGCGTATCCAAGACCCTCTGATAGA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCATCCCCTTGGTCCATaGTCTCCATCATCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKHPLGP*SPSSFL
Trigger: CAGAAAAGATGATGGAGACCATGGACCAAGGGGATG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 72 bp CTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTaGACAGCCAAGGTCTTGCCATCAGGATCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LSTAPHGPHSPA*TAKVLPSGSEL
Trigger: TAGCTCTGATCCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGACCACCTCGCCTTCATaGTTGTATTCTTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKTTSPS*LYSSSD
Trigger: GTCAGAAGAAGAATACAATCATGAAGGCGAGGTGGT...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGCAAACTGCTCAGGTGTaGGGCCAAACTTTTTGGCCA +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRQTAQV*GQTFWP
Trigger: TGGCCAAAAAGTTTGGCCTCACACCTGAGCAGTTTG...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGTGTGAAGTCATGTTCTaGGGCAAGGCATTCACAGCC +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRCEVMF*GKAFTA
Trigger: GGCTGTGAATGCCTTGCCTCAGAACATGACTTCACA...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCCGGCAGGTCAGGTCTaGACTGAACTTTTCAATATC +
Preference number: 4 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGPAGQV*TELFNI
Trigger: GATATTGAAAAGTTCAGTGCAGACCTGACCTGCCGG...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGTTTTCTCTTCTTGTaGCCAACATCGTCTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKRFLFL*PTSSSE
Trigger: CTCAGAAGACGATGTTGGCCACAAGAAGAGAAAACG...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGAGATTTCCCCTGCAATaGCCTCCTTCTCGTGTTCCT +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRRFPLQ*PPSRVP
Trigger: AGGAACACGAGAAGGAGGCCATTGCAGGGGAAATCT...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTCACACGTTTCTTaGTGGTCTTCTTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRDSHVS*WSSWGA
Trigger: TGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTC...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTCGGATTTCATTGTCCTaGTCTGTGAGGTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFRISLS*SVRWLL
Trigger: GAGCAGCCACCTCACAGACCAGGACAATGAAATCCG...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGACGGATGCCCTTCCCCTaGTTCTCATCCATAAAGTCG +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRRMPFP*FSSIKS
Trigger: CGACTTTATGGATGAGAACCAGGGGAAGGGCATCCG...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGACAGCTGTTGGCCTTaGTCCAGCTCATGCACTATC +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFDSCWP*SSSCTI
Trigger: GATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTC...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCCATAGTAGGTGTCCTTaGGCAGTTTCCACTCATTGT +
Preference number: 4 (lower is better)
Translates to: FKLLKQPYRARELEASASHSRCP*AVSTHC
Trigger: ACAATGAGTGGAAACTGCCCAAGGACACCTACTATG...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTTCCTCTTCCTGCTTGTaGTCTGCAGCTTCCGCATCA +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFSSSCL*SAASAS
Trigger: TGATGCGGAAGCTGCAGACCACAAGCAGGAAGAGGA...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCCTCTTTGATCTTCTaGACTGTGCTGGGCCCTTTA +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFASLIF*TVLGPL
Trigger: TAAAGGGCCCAGCACAGTTCAGAAGATCAAAGAGGC...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTCTTCTCCTTCACCATTaGCTAGGGCACAGAACACAG +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFLLLHH*LGHRTQ
Trigger: CTGTGTTCTGTGCCCTAGTCAATGGTGAAGGAGAAG...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACAGGGTTTCAATATCTTaGGCCTTCTTTTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDRVSIS*AFFSRS
Trigger: GGAGCGGGAAAAGAAGGCTCAAGATATTGAAACCCT...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAATCTCCTGGGCTTCCTaGAGGGCTGCATCTGTATAT +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRISWAS*RAASVY
Trigger: ATATACAGATGCAGCCCTGCAGGAAGCCCAGGAGAT...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCTATCTAGAGCCCGGATaGCGTCAGCAAGAGGTTTGT +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPYLEPG*RQQEVC
Trigger: ACAAACCTCTTGCTGACGGCATCCGGGCTCTAGATA...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTATCTGGACGGTAGGGTaGCACTCTCAACCAGTTGTA +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFIWTVG*HSQPVV
Trigger: TACAACTGGTTGAGAGTGGCACCCTACCGTCCAGAT...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCCAATGTATGAGTCAGTaGTGTCCCCCAGAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPQCMSQ*CPPEKQ
Trigger: CTGCTTCTCTGGGGGACAGCACTGACTCATACATTG...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCTTCCTGCTTGTGGTCTaGAGCTTCCGCATCAAAGTC +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPFLLVV*SFRIKV
Trigger: GACTTTGATGCGGAAGCTGCAGACCACAAGCAGGAA...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCGTAGCATTGGGGTTCTaGCCCTGGCCTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVVALGF*PWPVTA
Trigger: TGCTGTGACAGGCCAGGGGCAGAACCCCAATGCTAC...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTCTTGGTGGTCTTCTTaGGGCGCACTCGGATCTCAC +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNSWWSS*GALGSH
Trigger: GTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTTGCACACGTAATCTTTaGCCAGCTCCAAAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFCTRNL*PAPKAL
Trigger: CAGAGCCTTTGGAGCTGGCCAAAGATTACGTGTGCA...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATAGCTTGGCTCTCTCCTaGAAGGTTTGTCTCAGCACC +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNSLALS*KVCLST
Trigger: GGTGCTGAGACAAACCTTTCAGGAGAGAGCCAAGCT...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCTGCTCCTGCAAGGGATaGAACTTGAGACACAGGATG +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLCSCKG*NLRHRM
Trigger: CATCCTGTGTCTCAAGTTTCATCCCTTGCAGGAGCA...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACAGCCAGCACAATTCATaGAGACTTTGGGACCCATAT +
Preference number: 4 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDSQHNS*RLWDPY
Trigger: ATATGGGTCCCAAAGTCTTCATGAATTGTGCTGGCT...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTCACAGGTCATTGATGTaGAGCTCAGGTTCCACATAC +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIHRSLM*SSGSTY
Trigger: GTATGTGGAACCTGAGCTGCACATCAATGACCTGTG...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCGCCCCAGTCGATAGCTaGATGGCTGTTGGACTTTGG +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVAPVDS*MAVGLW
Trigger: CCAAAGTCCAACAGCCATGCAGCTATCGACTGGGGC...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCATCCTTCAGCCGCTCTaGGTTTTCCAAGATTTCCTC +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPILQPL*VFQDFL
Trigger: GAGGAAATCTTGGAAAACCCAGAGCGGCTGAAGGAT...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCTTGAAATTTATGTTATaGAAGGACGGGTGTGCAATC +
Preference number: 4 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPLKFML*KDGCAI
Trigger: GATTGCACACCCGTCCTTCCATAACATAAATTTCAA...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTTTACATATTCTATCCTaGGTTTACCCCGGGGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDILHILS*VYPGAG
Trigger: ACCAGCCCCGGGGTAAACCCAGGATAGAATATGTAA...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCGCGATAGTGACCACATaGGGCTTCTTATTCACAAGA +
Preference number: 4 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPAIVTT*GFLFTR
Trigger: TCTTGTGAATAAGAAGCCTCATGTGGTCACTATCGC...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCGGAACTCTGCCTCTaGTTTCTTGCTGTTCATGTA +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLPELCL*FLAVHV
Trigger: TACATGAACAGCAAGAAATCAGAGGCAGAGTTCCGG...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGAGGTCAGGTCTGCACTaGACTTTTCAATATCGATCT +
Preference number: 4 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRRSGLH*TFQYRS
Trigger: AGATCGATATTGAAAAGTTCAGTGCAGACCTGACCT...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGCGGTCATCAAAAGATaGGCGTTTTCTCTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRAVIKR*AFSLLV
Trigger: CACAAGAAGAGAAAACGCCCATCTTTTGATGACCGC...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTCCTCAGTCAGCATCTaGGCATCCCTGTTCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVSSVSI*ASLFSP
Trigger: AGGAGAGAACAGGGATGCCCAGATGCTGACTGAGGA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTATGATAACATCCCCTTaGTCCATGGTCTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIMITSP*SMVSII
Trigger: GATGATGGAGACCATGGACCAAGGGGATGTTATCAT...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAATTGTATTCTTCTTCTaGCTCTTCGGCCTCACTTTC +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRIVFFF*LFGLTF
Trigger: GAAAGTGAGGCCGAAGAGTCAGAAGAAGAATACAAT...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTTCATATCCTCTTCCTaGTTGTGGTCTGCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNFISSS*LWSAAS
Trigger: GGAAGCTGCAGACCACAAGCAGGAAGAGGATATGAA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGGGTTATGTTTAGCTTaGCTCTCTCCTGAAAGGTTT +
Preference number: 4 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRGLCLA*LSPERF
Trigger: AAACCTTTCAGGAGAGAGCCAAGCTAAACATAACCC...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCACACAGGGTGATCTCTaGCAGAGGAGAAAGCAATGC +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVTQGDL*QRRKQC
Trigger: GCATTGCTTTCTCCTCTGCCAGAGATCACCCTGTGT...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCATAGAAGACAGCTGTTaGCCTTGGTCCAGCTCATGC +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVIEDSC*PWSSSC
Trigger: GCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTAT...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTCATCATCATCCACAATaGAATCGTCAATGTCTGACT +
Preference number: 4 (lower is better)
Translates to: EGLSQVRASRDITDCSTFHHHPQ*NRQCLT
Trigger: AGTCAGACATTGACGATTTCATTGTGGATGATGATG...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATCAATATCGATCTTCATaGTCCGGCAGTGAACAGTCA +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNQYRSS*SGSEQS
Trigger: TGACTGTTCACTGCCGGATCATGAAGATCGATATTG...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTCTCAAAGATGCTCCTaGGACTCACACGTTTCTTGG +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVSQRCS*DSHVSW
Trigger: CCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTGTCTTCATCTGAGCTaGACACCTGGGCAAATTCTA +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNCLHLS*TPGQIL
Trigger: TAGAATTTGCCCAGGTGTGCAGCTCAGATGAAGACA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTCCCCTTCTTCATCTTaGAAGATTTCCCCTGCAATG +
Preference number: 4 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNSPSSS*KISPAM
Trigger: CATTGCAGGGGAAATCTTCCAAGATGAAGAAGGGGA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAAGGATGCCCACTGGGCTaGGGTAGCATTGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEGCPLG*GSIGVL
Trigger: CAGAACCCCAATGCTACCCCAGCCCAGTGGGCATCC...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCAGTTCATCCATTGACTaGACATCTTTGAGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVSSSID*TSLSLS
Trigger: GGAGAGGCTCAAAGATGTTCAGTCAATGGATGAACT...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCTCTCGTGTTCCTCTTTaGCATATTCCTCTTCATCAT +
Preference number: 4 (lower is better)
Translates to: SQVRASRDITDCSTFALLSRVPL*HIPLHH
Trigger: ATGATGAAGAGGAATATGGCAAAGAGGAACACGAGA...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR GCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCGGAGATGGTCGGTGTTaGGAAGGCATTTCTATAGAT +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVGDGRC*EGISID
Trigger: ATCTATAGAAATGCCTTCGCAACACCGACCATCTCC...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAATTGGGGTTCTGCCCCTaGCCTGTCACAGCAGCAATG +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAELGFCP*PVTAAM
Trigger: CATTGCTGCTGTGACAGGCCAGGGGCAGAACCCCAA...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAACCATATGACACATGGTaGCCAGCTGAGTCCGGCTCT +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEPYDTW*PAESGS
Trigger: AGAGCCGGACTCAGCTGGTCACCATGTGTCATATGG...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAACAGGATGTCTTCATCTaGGCTGCACACCTGGGCAAA +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEQDVFI*AAHLGK
Trigger: TTTGCCCAGGTGTGCAGCTCAGATGAAGACATCCTG...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTCCTCAAAATATGTCTaGTCATTACCATACCCTTCC +
Preference number: 4 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVSSKYV*SLPYPS
Trigger: GGAAGGGTATGGTAATGACCAGACATATTTTGAGGA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAAGGGCTCCAGCAGGATTaGCATCTTCTGCAGACTCAT +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEGLQQD*HLLQTH
Trigger: ATGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCC...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
3UTR CAA 72 bp ATCCTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTaGGAGCTTCAAACTGCTGAAGCAGCCCTACAGAGC +
Preference number: 4 (lower is better)
Translates to: ILDSLVDYERKF*ELQTAEAALQS
Trigger: GCTCTGTAGGGCTGCTTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAACAGCAGCAATGGCACTaGACATCTGTGAAGTCATGT +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEQQQWH*TSVKSC
Trigger: ACATGACTTCACAGATGTTCAGTGCCATTGCTGCTG...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR TCA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAACCAAATTCTCCTCAATaGGGTCAAAATCATCATCTT +
Preference number: 4 (lower is better)
Translates to: LDSLVDYERKFLELQTAEPNSPQ*GQNHHL
Trigger: AAGATGATGATTTTGACCTCATTGAGGAGAATTTGG...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTTCATCCTCAGCTGCCTaGACTGGGATGGAGCGGAGC +
Preference number: 5 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSSSSAA*TGMERS
Trigger: GCTCCGCTCCATCCCAGTCAAGGCAGCTGAGGATGA...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCATGGGCAATGGCACGGTaGACATCCACCCCGACCTCA +
Preference number: 5 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSWAMAR*TSTPTS
Trigger: TGAGGTCGGGGTGGATGTCAACCGTGCCATTGCCCA...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp GGCGCTGGTAGCTGTCACGGAGGTTCTCCCCAAACTGCTCAGGTGTaGGGCCAAACTTTTTGGCCAGGCCATCTAGCCCGGCACTCTGGC +
Preference number: 5 (lower is better)
Translates to: GAGSCHGGSPQTAQV*GQTFWPGHLARHSG
Trigger: GCCAGAGTGCCGGGCTAGATGGCCTGGCCAAAAAGTTTGGCCTCACACCTGAGCAGTTTGGGGAGAACCTCCGTGACAGCTACCAGCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGCGGCGGGAGGCTTGCTaGAGCTCTGGTCCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRRREAC*SSGPLC
Trigger: ACAGAGGGGACCAGAGCTCAAGCAAGCCTCCCGCCG...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCACCCTCCACAGGTCATaGATGTGCAGCTCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPTLHRS*MCSSGS
Trigger: GGAACCTGAGCTGCACATCAATGACCTGTGGAGGGT...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTAAGCCGGTGACGCCATaGTCTAGCCGTGTTTTCACA +
Preference number: 5 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSKPVTP*SSRVFT
Trigger: TGTGAAAACACGGCTAGACAATGGCGTCACCGGCTT...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp ACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCTCTATATCCTCTTCCTGCTaGTGGTCTGCAGCTTCCGCA +
Preference number: 5 (lower is better)
Translates to: TAEAALQSEGAGGLGKRSISSSC*WSAASA
Trigger: TGCGGAAGCTGCAGACCACAAGCAGGAAGAGGATAT...AGAGCGCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGTGGCTGCTGTTGCCGTaGTCGGGAGCTGGAGGAAGG +
Preference number: 5 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRWLLLP*SGAGGR
Trigger: CCTTCCTCCAGCTCCCGACAACGGCAACAGCAGCCA...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp GTTGACAGAAGGGGCACTGCCACAGCCCTGTCTCATCATTTCGGATaGCCTGGTCATAGCTCTCACCCTGTGGGCGCCTGTGAGCAATGC +
Preference number: 5 (lower is better)
Translates to: VDRRGTATALSHHFG*PGHSSHPVGACEQC
Trigger: GCATTGCTCACAGGCGCCCACAGGGTGAGAGCTATGACCAGGCCATCCGAAATGATGAGACAGGGCTGTGGCAGTGCCCCTTCTGTCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GTGGCCAGGCCTCTTGGGAGCTTCAGAGGTAACCAGAGTCCGAGGAACAGGCCCCCGTCAGCAAGAGGTTaGTCAGGGTCAGCAGAGATT +
Preference number: 5 (lower is better)
Translates to: VARPLGSFRGNQSPRNRPPSARG*SGSAEI
Trigger: AATCTCTGCTGACCCTGACAAACCTCTTGCTGACGG...GGGCCTGTTCCTCGGACTCTGGTTACCTCTGAAGCTCCCAAGAGGCCTGGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGGTTAGGTGATGAGGGAAGGCAGGCAGGCAGGCAGGCAGGGGCTGGCAGCTCAGGCCTCTTCACCACCTaGTCACTGAGGAATTTGGTA +
Preference number: 5 (lower is better)
Translates to: RLGDEGRQAGRQAGAGSSGLFTT*SLRNLV
Trigger: TACCAAATTCCTCAGTGACAAGGTGGTGAAGAGGCC...TGAGCTGCCAGCCCCTGCCTGCCTGCCTGCCTGCCTTCCCTCATCACCTAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGTTCCATTCCTGTACTaGGTGGCTGAACTCATCCCG +
Preference number: 5 (lower is better)
Translates to: FKLLKQPYRARELEASASVPFLY*VAELIP
Trigger: CGGGATGAGTTCAGCCACCAAGTACAGGAATGGAAC...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GCAGGCAGGGGCTGGCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTGCAATGCCGGTAACATaGCAGATGATAAGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: AGRGWQLSTAPHGPHSPAAMPVT*QMISFP
Trigger: TGGAAAGCTTATCATCTGCAATGTTACCGGCATTGC...AGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGCCAGCCCCTGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCTATCCCAGGAGGAACTaGCCGGGCAGCTCCTTGCAG +
Preference number: 5 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPYPRRN*PGSSLQ
Trigger: CTGCAAGGAGCTGCCCGGCAAGTTCCTCCTGGGATA...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGGACTTTGGCTGCTGTaGCCGTTGTCGGGAGCTGGA +
Preference number: 5 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRGLWLL*PLSGAG
Trigger: TCCAGCTCCCGACAACGGCAACAGCAGCCAAAGTCC...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp CCTTGCCCTCTTCCCGCACGTCCACGTGCTGGTAGATGCCAGCACTaGCTTTCCAGGTCACCGTCAGATGGTTTTCACCTTTACTGCTGG +
Preference number: 5 (lower is better)
Translates to: PCPLPARPRAGRCQH*LSRSPSDGFHLYCW
Trigger: CCAGCAGTAAAGGTGAAAACCATCTGACGGTGACCTGGAAAGTCAGTGCTGGCATCTACCAGCACGTGGACGTGCGGGAAGAGGGCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCGCCTCAGCTAGCAGCTaGTTCTTAAGTTCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: FKLLKQPYRARELEASASASASS*FLSSLA
Trigger: GGCCAAAGAACTTAAGAACAAGCTGCTAGCTGAGGC...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CTTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGGGCAGTTTCCACTCATaGTTCCTGTCCATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: LQTAEAALQSEGAGGLGKGSFHS*FLSMRS
Trigger: AGACCTCATGGACAGGAACAATGAGTGGAAACTGCC...CTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCCCCTGGAGCTGGTGGTATaGTGGGGTGGTAATGGGCTG +
Preference number: 5 (lower is better)
Translates to: SGEGFQRHYRLLHLCSPPLELVV*WGGNGL
Trigger: CAGCCCATTACCACCCCACAATACCACCAGCTCCAG...GGGAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp AGCTCCACCCCAATAGAAGACAGCTGTTGGCCTTGGTCCAGCTCATaGACTATCCGCTTCACATCCTCAGTCAGCATCTGGGCATCCCTG +
Preference number: 5 (lower is better)
Translates to: SSTPIEDSCWPWSSS*TIRFTSSVSIWASL
Trigger: CAGGGATGCCCAGATGCTGACTGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTCAAACTGCTGAAGCAGCCCTACAGAGCGAGGGAGCTGGAGGCCTCGGCAAGCAGGGTCAGCAGAGATTaGCTCATACTGATAAGCCTG +
Preference number: 5 (lower is better)
Translates to: FKLLKQPYRARELEASASRVSRD*LILISL
Trigger: CAGGCTTATCAGTATGAGCAAATCTCTGCTGACCCT...GCTTGCCGAGGCCTCCAGCTCCCTCGCTCTGTAGGGCTGCTTCAGCAGTTTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTAGAATGGCCAGCTCATaGTCAACCAGCTCCACCCCA +
Preference number: 5 (lower is better)
Translates to: EGLSQVRASRDITDCSTFRMASS*STSSTP
Trigger: TGGGGTGGAGCTGGTTGACAATGAGCTGGCCATTCT...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAAGGGCTCCAGCAGGATaGGCATCTTCTGCAGACTCA +
Preference number: 5 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRRAPAG*ASSADS
Trigger: TGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCCT...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGCTCAGGGAAGTTGTCTaGTTGACAGAAGGGGCACTG +
Preference number: 5 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRLREVV*LTEGAL
Trigger: CAGTGCCCCTTCTGTCAACAAGACAACTTCCCTGAG...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACAGAGTCCATTCACAGTaGGGAAAATCTGGCCCCGGT +
Preference number: 5 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDRVHSQ*GKSGPG
Trigger: ACCGGGGCCAGATTTTCCCAACTGTGAATGGACTCT...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp GTTCTGCCCCTGGCCTGTCACAGCAGCAATGGCACTGAACATCTGTaGAGTCATGTTCTGAGGCAAGGCATTCACAGCCCGTGTGAGATC +
Preference number: 5 (lower is better)
Translates to: VLPLACHSSNGTEHL*SHVLRQGIHSPCEI
Trigger: GATCTCACACGGGCTGTGAATGCCTTGCCTCAGAACATGACTTCACAGATGTTCAGTGCCATTGCTGCTGTGACAGGCCAGGGGCAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp CATAAAGTCGTCGTCCTCCTCTACCTGCTGATCTGGACGGTAGGGTaGCACTCTCAACCAGTTGTAGAGCTTTCGGCTACAGGCCTTCAC +
Preference number: 5 (lower is better)
Translates to: HKVVVLLYLLIWTVG*HSQPVVELSATGLH
Trigger: GTGAAGGCCTGTAGCCGAAAGCTCTACAACTGGTTGAGAGTGGCACCCTACCGTCCAGATCAGCAGGTAGAGGAGGACGACGACTTTATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp GCCAGCTCATTGTCAACCAGCTCCACCCCAATAGAAGACAGCTGTTaGCCTTGGTCCAGCTCATGCACTATCCGCTTCACATCCTCAGTC +
Preference number: 5 (lower is better)
Translates to: ASSLSTSSTPIEDSC*PWSSSCTIRFTSSV
Trigger: GACTGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCTGGTTGACAATGAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTTCTTCCACAAACTTCTaGGTGACTCTAGGTACCACC +
Preference number: 5 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGSSTNF*VTLGTT
Trigger: GGTGGTACCTAGAGTCACCAAGAAGTTTGTGGAAGA...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTTTCTTCCGGCTAGCCTaGGCAGCATTCTGCATCTTG +
Preference number: 5 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIFFRLA*AAFCIL
Trigger: CAAGATGCAGAATGCTGCCAAGGCTAGCCGGAAGAA...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCCATGCAGTTCGCCGCTaGGTAAAATGGGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVHAVRR*VKWGRR
Trigger: CCGCCTGCCCCATTTTACCAAGCGGCGAACTGCATG...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACAATAGAAGACAGCTGTaGGCCTTGGTCCAGCTCATG +
Preference number: 5 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDNRRQL*ALVQLM
Trigger: CATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATT...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTTCCACCCCGACCTCATaGACCCGGTTGATGAATTCA +
Preference number: 5 (lower is better)
Translates to: LSCMPHEGLSQVRASRDISTPTS*TRLMNS
Trigger: TGAATTCATCAACCGGGTCAATGAGGTCGGGGTGGA...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGGAAGCAGTGTCGATCTaGAGGAAGCCAGCACAATTC +
Preference number: 5 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIREAVSI*RKPAQF
Trigger: GAATTGTGCTGGCTTCCTCAAGATCGACACTGCTTC...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTATAGCTGCATGGCTGTaGGACTTTGGCTGCTGTTGC +
Preference number: 5 (lower is better)
Translates to: EGLSQVRASRDITDCSTFIAAWL*DFGCCC
Trigger: GCAACAGCAGCCAAAGTCCAACAGCCATGCAGCTAT...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp GCTGAGTCCACTTCTCATCCCACTGCCACACCCTCCACAGGTCATTaGTGTGCAGCTCAGGTTCCACATACTCCTTTCGGTAGAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AESTSHPTATPSTGH*CAAQVPHTPFGRRQ
Trigger: TTGCCTTCTACCGAAAGGAGTATGTGGAACCTGAGCTGCACATCAATGACCTGTGGAGGGTGTGGCAGTGGGATGAGAAGTGGACTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp AAGCCGGTGACGCCATTGTCTAGCCGTGTTTTCACACCAATGGCCTaGCCAGGGCATGATCCACTGTCAAAATGGTTCCAGACCTCGCTT +
Preference number: 5 (lower is better)
Translates to: KPVTPLSSRVFTPMA*PGHDPLSKWFQTSL
Trigger: AAGCGAGGTCTGGAACCATTTTGACAGTGGATCATGCCCTGGTCAGGCCATTGGTGTGAAAACACGGCTAGACAATGGCGTCACCGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp AGAGCGGTAGGCTGTCCGGAGGTCCTTATACCTACAACTGAGCTCTaGTCGGATGTCATACAGTGTGATGTGCTTGTCACCATAGCCCTG +
Preference number: 5 (lower is better)
Translates to: RAVGCPEVLIPTTEL*SDVIQCDVLVTIAL
Trigger: CAGGGCTATGGTGACAAGCACATCACACTGTATGACATCCGAGCAGAGCTCAGTTGTAGGTATAAGGACCTCCGGACAGCCTACCGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp TCAGGCAAGTCAGTGGCTCGGATTTCATTGTCCTGGTCTGTGAGGTaGCTGCTCTCCAGCTCACTAGGCTCGTACATCTCAAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: SGKSVARISLSWSVR*LLSSSLGSYISKML
Trigger: GAGCATCTTTGAGATGTACGAGCCTAGTGAGCTGGAGAGCAGCCACCTCACAGACCAGGACAATGAAATCCGAGCCACTGACTTGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp CTGGTTCTCATCCATAAAGTCGTCGTCCTCCTCTACCTGCTGATCTaGACGGTAGGGTGCCACTCTCAACCAGTTGTAGAGCTTTCGGCT +
Preference number: 5 (lower is better)
Translates to: LVLIHKVVVLLYLLI*TVGCHSQPVVELSA
Trigger: AGCCGAAAGCTCTACAACTGGTTGAGAGTGGCACCCTACCGTCCAGATCAGCAGGTAGAGGAGGACGACGACTTTATGGATGAGAACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp CCCTGTCTCATCATTTCGGATGGCCTGGTCATAGCTCTCACCCTGTaGGCGCCTGTGAGCAATGCCGGTAACATTGCAGATGATAAGCTT +
Preference number: 5 (lower is better)
Translates to: PCLIISDGLVIALTL*APVSNAGNIADDKL
Trigger: AAGCTTATCATCTGCAATGTTACCGGCATTGCTCACAGGCGCCCACAGGGTGAGAGCTATGACCAGGCCATCCGAAATGATGAGACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTGGGCGTTTTCTCTTCTaGTGGCCAACATCGTCTTCT +
Preference number: 5 (lower is better)
Translates to: LSCMPHEGLSQVRASRDIGRFLF*WPTSSS
Trigger: AGAAGACGATGTTGGCCACAAGAAGAGAAAACGCCC...AATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCCGACTCACACGTTTCTaGGTGGTCTTCTTGGGGCGC +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVRLTRF*VVFLGR
Trigger: GCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCG...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTCAGCCAGGCCTATCTaGAGGAACTGGTCGTCTCTC +
Preference number: 5 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNSARPI*RNWSSL
Trigger: GAGAGACGACCAGTTCCTCAAGATAGGCCTGGCTGA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGACAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGATTGTCACTGAGGAATTaGGTAGGGATGAAGCCGGTG +
Preference number: 5 (lower is better)
Translates to: RQLSCMPHEGLSQVRASRLSLRN*VGMKPV
Trigger: CACCGGCTTCATCCCTACCAAATTCCTCAGTGACAA...TCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp TGTTTAGCTTGGCTCTCTCCTGAAAGGTTTGTCTCAGCACCTGTCTaGCAAGGGGCTCCCTGGCAATCTGTAGTGCAACCATGTATCGGG +
Preference number: 5 (lower is better)
Translates to: CLAWLSPERFVSAPV*QGAPWQSVVQPCIG
Trigger: CCCGATACATGGTTGCACTACAGATTGCCAGGGAGCCCCTTGTCAGACAGGTGCTGAGACAAACCTTTCAGGAGAGAGCCAAGCTAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp GCTCGTACATCTCAAAGATGCTCCTGCGACTCACACGTTTCTTGGTaGTCTTCTTGGGGCGCACTCGGATCTCACCTTCAGTCTCATCAT +
Preference number: 5 (lower is better)
Translates to: ARTSQRCSCDSHVSW*SSWGALGSHLQSHH
Trigger: ATGATGAGACTGAAGGTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGATGTACGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp TTTTCCCGCTCCTCTTCTCTCCATGCAGTTCGCCGCTTGGTAAAATaGGGCAGGCGGAGGAAATCAGTCACTTCTCCTTCACCATTGACT +
Preference number: 5 (lower is better)
Translates to: FSRSSSLHAVRRLVK*GRRRKSVTSPSPLT
Trigger: AGTCAATGGTGAAGGAGAAGTGACTGATTTCCTCCGCCTGCCCCATTTTACCAAGCGGCGAACTGCATGGAGAGAAGAGGAGCGGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp TCATTGTCAACCAGCTCCACCCCAATAGAAGACAGCTGTTGGCCTTaGTCCAGCTCATGCACTATCCGCTTCACATCCTCAGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: SLSTSSTPIEDSCWP*SSSCTIRFTSSVSI
Trigger: GATGCTGACTGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCTGGTTGACAATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp CTTCTGCAGACTCATCGTATTCTAAGGCATCCACTGCCATCTTCCTaGCCCACTCGTACGTTTCAGGGTGGACTCGAGAGCCATCAAGAA +
Preference number: 5 (lower is better)
Translates to: LLQTHRILRHPLPSS*PTRTFQGGLESHQE
Trigger: TTCTTGATGGCTCTCGAGTCCACCCTGAAACGTACGAGTGGGCCAGGAAGATGGCAGTGGATGCCTTAGAATACGATGAGTCTGCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp GCCGCTCTGGGTTTTCCAAGATTTCCTCAAGGGCTCCAGCAGGATTaGCATCTTCTGCAGACTCATCGTATTCTAAGGCATCCACTGCCA +
Preference number: 5 (lower is better)
Translates to: AALGFPRFPQGLQQD*HLLQTHRILRHPLP
Trigger: TGGCAGTGGATGCCTTAGAATACGATGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCCTTGAGGAAATCTTGGAAAACCCAGAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTTCCCCTTCTTCATCTaGGAAGATTTCCCCTGCAAT +
Preference number: 5 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDFPFFI*EDFPCN
Trigger: ATTGCAGGGGAAATCTTCCAAGATGAAGAAGGGGAA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTTCTTGGTGGTCTTCTaGGGGCGCACTCGGATCTCA +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVFLVVF*GRTRIS
Trigger: TGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GCAGCTCAGCACTGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTGTCTCTGGCGTCTCTTaGGTTAACATATTGAAGATC +
Preference number: 5 (lower is better)
Translates to: AAQHCSTWPSQSCFDSQGVSGVS*VNILKI
Trigger: GATCTTCAATATGTTAACCAAAGAGACGCCAGAGAC...ACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCAGTGCTGAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTTGGCTGGGGTAGCATaGATAGAAGCAGGGGTCCGT +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVLAGVA*IEAGVR
Trigger: ACGGACCCCTGCTTCTATCAATGCTACCCCAGCCAA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTCTGCAAGATTGATGTaGGCTGGGGTAGCATTGATA +
Preference number: 5 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDSARLM*AGVALI
Trigger: TATCAATGCTACCCCAGCCAACATCAATCTTGCAGA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp TCAAAATGGTTCCAGACCTCGCTTAGCTCAGGGAAGTTGTCTTGTTaGCAGAAGGGGCACTGCCACAGCCCTGTCTCATCATTTCGGATG +
Preference number: 5 (lower is better)
Translates to: SKWFQTSLSSGKLSC*QKGHCHSPVSSFRM
Trigger: CATCCGAAATGATGAGACAGGGCTGTGGCAGTGCCCCTTCTGTCAACAAGACAACTTCCCTGAGCTAAGCGAGGTCTGGAACCATTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp GGTGTCCTTGGGCAGTTTCCACTCATTGTTCCTGTCCATGAGGTCTaGGGTCCGGCAGGTCAGGTCTGCACTGAACTTTTCAATATCGAT +
Preference number: 5 (lower is better)
Translates to: GVLGQFPLIVPVHEV*GPAGQVCTELFNID
Trigger: ATCGATATTGAAAAGTTCAGTGCAGACCTGACCTGCCGGACCTCAGACCTCATGGACAGGAACAATGAGTGGAAACTGCCCAAGGACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp AGCCTCCTGGCCTTCTTCCCCTTCTTCATCTTGGAAGATTTCCCCTaGAATGGCCTCCTTCTCGTGTTCCTCTTTGCCATATTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: SLLAFFPFFILEDFP*NGLLLVFLFAIFLF
Trigger: GAAGAGGAATATGGCAAAGAGGAACACGAGAAGGAGGCCATTGCAGGGGAAATCTTCCAAGATGAAGAAGGGGAAGAAGGCCAGGAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp TCTTCATCTGAGCTGCACACCTGGGCAAATTCTATCAGAGGGTCTTaGATACGCCGGGCTAGAGAGACAGCTTGTCTCAAAACTGGTGGA +
Preference number: 5 (lower is better)
Translates to: SSSELHTWANSIRGS*IRRARETACLKTGG
Trigger: TCCACCAGTTTTGAGACAAGCTGTCTCTCTAGCCCGGCGTATCCAAGACCCTCTGATAGAATTTGCCCAGGTGTGCAGCTCAGATGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp AGAAGCAGGGGTCCGTGTTCTGTTACTGCTACTGGGAGTGATGCCTaGTACAGGATCCTGATAGTGATCCTTAAACCACCTGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: RSRGPCSVTATGSDA*YRILIVILKPPEES
Trigger: GGACTCTTCAGGTGGTTTAAGGATCACTATCAGGATCCTGTACCAGGCATCACTCCCAGTAGCAGTAACAGAACACGGACCCCTGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TGCTCCACATGGCCCTCACAGTCCTGCTTTGACAGCCAAGGTCTTGCCATCAGGTTCTCGTGTTCCTCTTaGCCATATTCCTCTTCATCA +
Preference number: 5 (lower is better)
Translates to: CSTWPSQSCFDSQGLAIRFSCSS*PYSSSS
Trigger: TGATGAAGAGGAATATGGCAAAGAGGAACACGAGAA...CCTGATGGCAAGACCTTGGCTGTCAAAGCAGGACTGTGAGGGCCATGTGGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CCAAGGTCTTGCCATCAGGATCAGAGCTACTTTCCCTCCTGCCCCAAACTGAATTCTCTCCTGAAAGGTTaGTCTCAGCACCTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: PRSCHQDQSYFPSCPKLNSLLKG*SQHLSD
Trigger: GTCAGACAGGTGCTGAGACAAACCTTTCAGGAGAGA...ATTCAGTTTGGGGCAGGAGGGAAAGTAGCTCTGATCCTGATGGCAAGACCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp GAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTACCTCATTGACCCGGTaGATGAATTCACAGTACAAG +
Preference number: 5 (lower is better)
Translates to: EGLSQVRASRDITDCSTFTSLTR*MNSQYK
Trigger: CTTGTACTGTGAATTCATCAACCGGGTCAATGAGGT...AAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGACAGGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCAGGGAAGTTGTCTTGTaGACAGAAGGGGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVREVVL*TEGALP
Trigger: TGGCAGTGCCCCTTCTGTCAACAAGACAACTTCCCT...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCAATGATAACATCCCCTaGGTCCATGGTCTCCATCAT +
Preference number: 5 (lower is better)
Translates to: SQVRASRDITDCSTFALLNDNIP*VHGLHH
Trigger: ATGATGGAGACCATGGACCAAGGGGATGTTATCATT...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp ATGCTCCTGCAAGGGATGAAACTTGAGACACAGGATGTCTTCATCTaGGCTGCACACCTGGGCAAATTCTATCAGAGGGTCTTGGATACG +
Preference number: 5 (lower is better)
Translates to: MLLQGMKLETQDVFI*AAHLGKFYQRVLDT
Trigger: CGTATCCAAGACCCTCTGATAGAATTTGCCCAGGTGTGCAGCTCAGATGAAGACATCCTGTGTCTCAAGTTTCATCCCTTGCAGGAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp ATCCTGATAGTGATCCTTAAACCACCTGAAGAGTCCATTCACAGTTaGGAAAATCTGGCCCCGGTACCGGAATCCTTCAGGAGTCACTGT +
Preference number: 5 (lower is better)
Translates to: ILIVILKPPEESIHS*ENLAPVPESFRSHC
Trigger: ACAGTGACTCCTGAAGGATTCCGGTACCGGGGCCAGATTTTCCCAACTGTGAATGGACTCTTCAGGTGGTTTAAGGATCACTATCAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CAATTGAGCTGCATGCCTCATGAGGGCCTGTCTCAGGTGAGGGCTTCCAGAGACTCATCATCATCGTCATaGATAAAGTCTTTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: QLSCMPHEGLSQVRASRDSSSSS*IKSLRL
Trigger: CAACCTCAAAGACTTTATCAATGACGATGATGATGA...GTCTCTGGAAGCCCTCACCTGAGACAGGCCCTCATGAGGCATGCAGCTCAATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCTCCTTTCTACCTTTCTaGGTTGGGGTTATGTTTAGC +
Preference number: 5 (lower is better)
Translates to: SQVRASRDITDCSTFALLSFLPF*VGVMFS
Trigger: GCTAAACATAACCCCAACCAAGAAAGGTAGAAAGGA...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp TCTCAGGTGAGGGCTTCCAGAGACATTACAGACTGCTCCACCTTTGCTCTCCTCTCTGCCTCTGATTTCTaGCTGTTCATGTACAGAATG +
Preference number: 5 (lower is better)
Translates to: SQVRASRDITDCSTFALLSASDF*LFMYRM
Trigger: CATTCTGTACATGAACAGCAAGAAATCAGAGGCAGA...GAGGAGAGCAAAGGTGGAGCAGTCTGTAATGTCTCTGGAAGCCCTCACCTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTCAAATTCCTCACTGTaGATCCAAAGAGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVSNSSL*IQRVAP
Trigger: GGGAGCCACTCTTTGGATCAACAGTGAGGAATTTGA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAACACTGCTCGGCCATCTaGCCCCAGTCGATAGCTGCA +
Preference number: 5 (lower is better)
Translates to: LDSLVDYERKFLELQTAEHCSAI*PQSIAA
Trigger: TGCAGCTATCGACTGGGGCAAGATGGCCGAGCAGTG...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp ATGGTGAGCAGCCCTTCATCCTCAGCCAGGCCTATCTTGAGGAACTaGTCGTCTCTCAGCTCTTTAACAGGCTTGTTCTTTAAGTACTTA +
Preference number: 5 (lower is better)
Translates to: MVSSPSSSARPILRN*SSLSSLTGLFFKYL
Trigger: TAAGTACTTAAAGAACAAGCCTGTTAAAGAGCTGAGAGACGACCAGTTCCTCAAGATAGGCCTGGCTGAGGATGAAGGGCTGCTCACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp CCTGGTAATATTTGTGGTTCAGAAGGTCTCGAGCAAAGGAAGCCATaGGCTGGACATAGCGGGCAACAATCTCATCCAAGTCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: PGNICGSEGLEQRKP*AGHSGQQSHPSLQI
Trigger: AATTTGAAGACTTGGATGAGATTGTTGCCCGCTATGTCCAGCCCATGGCTTCCTTTGCTCGAGACCTTCTGAACCACAAATATTACCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp AGAGACTCCACTTCAACACGGCAAACAACAGATGGAAGAAGTCCACACAGGGTCTTCTACCTTTCTTGGTaGGGGTTATGTTTAGCTTGG +
Preference number: 5 (lower is better)
Translates to: RDSTSTRQTTDGRSPHRVFYLSW*GLCLAW
Trigger: CCAAGCTAAACATAACCCCAACCAAGAAAGGTAGAA...GACCCTGTGTGGACTTCTTCCATCTGTTGTTTGCCGTGTTGAAGTGGAGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 90 bp TCCATGGTCTCCATCATCTTTTCTGCTTGCTTGAAATTTATGTTATaGAAGGACGGGTGTGCAATCACTCGCTTGATGTATGTGGTCCGC +
Preference number: 5 (lower is better)
Translates to: SMVSIIFSACLKFML*KDGCAITRLMYVVR
Trigger: GCGGACCACATACATCAAGCGAGTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCAGAAAAGATGATGGAGACCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAAAGACAGCTGTTGGCCTaGGTCCAGCTCATGCACTAT +
Preference number: 5 (lower is better)
Translates to: LDSLVDYERKFLELQTAERQLLA*VQLMHY
Trigger: ATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCT...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 90 bp TCTTCCACAAACTTCTTGGTGACTCTAGGTACCACCTCGCCTTCATaGTTGTATTCTTCTTCTGACTCTTCGGCCTCACTTTCCACAAAA +
Preference number: 5 (lower is better)
Translates to: SSTNFLVTLGTTSPS*LYSSSDSSASLSTK
Trigger: TTTTGTGGAAAGTGAGGCCGAAGAGTCAGAAGAAGAATACAATCATGAAGGCGAGGTGGTACCTAGAGTCACCAAGAAGTTTGTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp CATCTTTTCTGCTTGCTTGAAATTTATGTTATGGAAGGACGGGTGTaGAATCACTCGCTTGATGTATGTGGTCCGCTGCTGCTTTCGTTT +
Preference number: 5 (lower is better)
Translates to: HLFCLLEIYVMEGRV*NHSLDVCGPLLLSF
Trigger: AAACGAAAGCAGCAGCGGACCACATACATCAAGCGAGTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCAGAAAAGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp ATGATAACATCCCCTTGGTCCATGGTCTCCATCATCTTTTCTGCTTaGTTGAAATTTATGTTATGGAAGGACGGGTGTGCAATCACTCGC +
Preference number: 5 (lower is better)
Translates to: MITSPWSMVSIIFSA*LKFMLWKDGCAITR
Trigger: GCGAGTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCAGAAAAGATGATGGAGACCATGGACCAAGGGGATGTTATCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 90 bp CCGAATGATAACATCCCCTTGGTCCATGGTCTCCATCATCTTTTCTaGTTGCTTGAAATTTATGTTATGGAAGGACGGGTGTGCAATCAC +
Preference number: 5 (lower is better)
Translates to: PNDNIPLVHGLHHLF*LLEIYVMEGRVCNH
Trigger: GTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCAGAAAAGATGATGGAGACCATGGACCAAGGGGATGTTATCATTCGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS-3UTR CAA 90 bp CTGGATTCTCTGGTAGATTATGAGAGGAAGTTTTTGGAGCTTCAAACTGCTGAAAAGTTCTTTGGCCATTaGCACGTAGAGGAACTGCTG +
Preference number: 5 (lower is better)
Translates to: LDSLVDYERKFLELQTAEKFFGH*HVEELL
Trigger: CAGCAGTTCCTCTACGTGCAAATGGCCAAAGAACTT...TTCAGCAGTTTGAAGCTCCAAAAACTTCCTCTCATAATCTACCAGAGAATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp GCTGGGCTGGTGTTGGGAACACATGGTAGGCGCTGCTaGCTCCTCCGCTGCCACCGTAGCCATACTGGCTGG +
Preference number: 6 (lower is better)
Translates to: AGLVLGTHGRRC*LLRCHRSHTGW
Trigger: CCAGCCAGTATGGCTACGGTGGCAGCGGAGGAGGCAGCAGCGCCTACCATGTGTTCCCAACACCAGCCCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GCCTGTGTAGACTGTGGGGTGGTGCTGGCCTGGAGCTaGTGGTATTGTGGGGTGGTAATGGGCTGGCTCGGG +
Preference number: 6 (lower is better)
Translates to: ACVDCGVVLAWS*WYCGVVMGWLG
Trigger: CCCGAGCCAGCCCATTACCACCCCACAATACCACCAGCTCCAGGCCAGCACCACCCCACAGTCTACACAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp AGCTTGGGGTCATTAGTGGTGTGGCCACTGGCTGCTGGGCTGGTGTaGGGAACACATGGTAGGCGCTGCTGCCTCCTCCGCTGCCACCGT +
Preference number: 6 (lower is better)
Translates to: SLGSLVVWPLAAGLV*GTHGRRCCLLRCHR
Trigger: ACGGTGGCAGCGGAGGAGGCAGCAGCGCCTACCATGTGTTCCCAACACCAGCCCAGCAGCCAGTGGCCACACCACTAATGACCCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp TCGATAGCTGCATGGCTGTTGGACTTTGGCTGCTGTTaGCGTTGTCGGGAGCTGGAGGAAGGCTGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SIAAWLLDFGCC*RCRELEEGWGW
Trigger: CCAGCCCCAGCCTTCCTCCAGCTCCCGACAACGGCAACAGCAGCCAAAGTCCAACAGCCATGCAGCTATCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp CACTGCTCGGCCATCTTGCCCCAGTCGATAGCTGCATaGCTGTTGGACTTTGGCTGCTGTTGCCGTTGTCGG +
Preference number: 6 (lower is better)
Translates to: HCSAILPQSIAA*LLDFGCCCRCR
Trigger: CCGACAACGGCAACAGCAGCCAAAGTCCAACAGCCATGCAGCTATCGACTGGGGCAAGATGGCCGAGCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp AGCTGTCACGGAGGTTCTCCCCAAACTGCTCAGGTGTaGGGCCAAACTTTTTGGCCAGGCCATCTAGCCCGG +
Preference number: 6 (lower is better)
Translates to: SCHGGSPQTAQV*GQTFWPGHLAR
Trigger: CCGGGCTAGATGGCCTGGCCAAAAAGTTTGGCCTCACACCTGAGCAGTTTGGGGAGAACCTCCGTGACAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TCAGCTTCCTCTTCTAGCTCATCATCCTCAGCTGCCTaGACTGGGATGGAGCGGAGCTGGAACCTCTCAGGC +
Preference number: 6 (lower is better)
Translates to: SASSSSSSSSAA*TGMERSWNLSG
Trigger: GCCTGAGAGGTTCCAGCTCCGCTCCATCCCAGTCAAGGCAGCTGAGGATGATGAGCTAGAAGAGGAAGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp CTTCCCGCACGTCCACGTGCTGGTAGATGCCAGCACTaGCTTTCCAGGTCACCGTCAGATGGTTTTCACCTT +
Preference number: 6 (lower is better)
Translates to: LPARPRAGRCQH*LSRSPSDGFHL
Trigger: AAGGTGAAAACCATCTGACGGTGACCTGGAAAGTCAGTGCTGGCATCTACCAGCACGTGGACGTGCGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp CTCTGGCAGATGGTATACATGTCTCGGCGGGAGGCTTaGTTGAGCTCTGGTCCCCTCTGTTCCTCATCTTCA +
Preference number: 6 (lower is better)
Translates to: LWQMVYMSRREA*LSSGPLCSSSS
Trigger: TGAAGATGAGGAACAGAGGGGACCAGAGCTCAAGCAAGCCTCCCGCCGAGACATGTATACCATCTGCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp AACTGCTGCAGAGCTCGCTCAATGGCCATAGTGCGCTaGCGGTTCCATTCCTGTACTTGGTGGCTGAACTCA +
Preference number: 6 (lower is better)
Translates to: NCCRARSMAIVR*RFHSCTWWLNS
Trigger: TGAGTTCAGCCACCAAGTACAGGAATGGAACCGGCAGCGCACTATGGCCATTGAGCGAGCTCTGCAGCAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp GTCGTCCTCCTCTACCTGCTGATCTGGACGGTAGGGTaGCACTCTCAACCAGTTGTAGAGCTTTCGGCTACA +
Preference number: 6 (lower is better)
Translates to: VVLLYLLIWTVG*HSQPVVELSAT
Trigger: TGTAGCCGAAAGCTCTACAACTGGTTGAGAGTGGCACCCTACCGTCCAGATCAGCAGGTAGAGGAGGACGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ACTGTTACATATTCTATCCTGGGTTTACCCCGGGGCTaGTATCCCAGGAGGAACTTGCCGGGCAGCTCCTTG +
Preference number: 6 (lower is better)
Translates to: TVTYSILGLPRG*YPRRNLPGSSL
Trigger: CAAGGAGCTGCCCGGCAAGTTCCTCCTGGGATACCAGCCCCGGGGTAAACCCAGGATAGAATATGTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TGGAACCTCTCAGGCAAGTCAGTGGCTCGGATTTCATaGTCCTGGTCTGTGAGGTGGCTGCTCTCCAGCTCA +
Preference number: 6 (lower is better)
Translates to: WNLSGKSVARIS*SWSVRWLLSSS
Trigger: TGAGCTGGAGAGCAGCCACCTCACAGACCAGGACAATGAAATCCGAGCCACTGACTTGCCTGAGAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TCCTCCTTTATGCGTTTCAGCTTCTTCCGGCTAGCCTaGGCAGCATTCTGCATCTTGGGGATGTCACGCCCG +
Preference number: 6 (lower is better)
Translates to: SSFMRFSFFRLA*AAFCILGMSRP
Trigger: CGGGCGTGACATCCCCAAGATGCAGAATGCTGCCAAGGCTAGCCGGAAGAAGCTGAAACGCATAAAGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp ACTCTGGCAGATGGTATACATGTCTCGGCGGGAGGCTaGCTTGAGCTCTGGTCCCCTCTGTTCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: TLADGIHVSAGG*LELWSPLFLIF
Trigger: GAAGATGAGGAACAGAGGGGACCAGAGCTCAAGCAAGCCTCCCGCCGAGACATGTATACCATCTGCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp AACAGCCGTGTTAGGTTCTCTTTGCGGATTCTCAGCTaGGTCCACTTCTCATCCCACTGCCACACCCTCCAC +
Preference number: 6 (lower is better)
Translates to: NSRVRFSLRILS*VHFSSHCHTLH
Trigger: GTGGAGGGTGTGGCAGTGGGATGAGAAGTGGACTCAGCTGAGAATCCGCAAAGAGAACCTAACACGGCTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp TGGCTCTCTCCTGAAAGGTTTGTCTCAGCACCTGTCTaGCAAGGGGCTCCCTGGCAATCTGTAGTGCAACCA +
Preference number: 6 (lower is better)
Translates to: WLSPERFVSAPV*QGAPWQSVVQP
Trigger: TGGTTGCACTACAGATTGCCAGGGAGCCCCTTGTCAGACAGGTGCTGAGACAAACCTTTCAGGAGAGAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp GCAGGCGGAGGAAATCAGTCACTTCTCCTTCACCATTaGCTAGGGCACAGAACACAGGGTGATCTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: AGGGNQSLLLHH*LGHRTQGDLWQ
Trigger: CTGCCAGAGATCACCCTGTGTTCTGTGCCCTAGTCAATGGTGAAGGAGAAGTGACTGATTTCCTCCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp GGGCAGTTTCCACTCATTGTTCCTGTCCATGAGGTCTaGGGTCCGGCAGGTCAGGTCTGCACTGAACTTTTC +
Preference number: 6 (lower is better)
Translates to: GQFPLIVPVHEV*GPAGQVCTELF
Trigger: GAAAAGTTCAGTGCAGACCTGACCTGCCGGACCTCAGACCTCATGGACAGGAACAATGAGTGGAAACTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp GGTTCTGCCCCTGGCCTGTCACAGCAGCAATGGCACTaGACATCTGTGAAGTCATGTTCTGAGGCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: GSAPGLSQQQWH*TSVKSCSEARH
Trigger: ATGCCTTGCCTCAGAACATGACTTCACAGATGTTCAGTGCCATTGCTGCTGTGACAGGCCAGGGGCAGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp TCTCAAAGATGCTCCTGCGACTCACACGTTTCTTGGTaGTCTTCTTGGGGCGCACTCGGATCTCACCTTCAG +
Preference number: 6 (lower is better)
Translates to: SQRCSCDSHVSW*SSWGALGSHLQ
Trigger: CTGAAGGTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GAGAAAGCAATGCCTAGGACTCGGATGCCCTTCCCCTaGTTCTCATCCATAAAGTCGTCGTCCTCCTCTACC +
Preference number: 6 (lower is better)
Translates to: EKAMPRTRMPFP*FSSIKSSSSST
Trigger: GGTAGAGGAGGACGACGACTTTATGGATGAGAACCAGGGGAAGGGCATCCGAGTCCTAGGCATTGCTTTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ACCAGCTCCACCCCAATAGAAGACAGCTGTTGGCCTTaGTCCAGCTCATGCACTATCCGCTTCACATCCTCA +
Preference number: 6 (lower is better)
Translates to: TSSTPIEDSCWP*SSSCTIRFTSS
Trigger: TGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ACTCATCGTATTCTAAGGCATCCACTGCCATCTTCCTaGCCCACTCGTACGTTTCAGGGTGGACTCGAGAGC +
Preference number: 6 (lower is better)
Translates to: THRILRHPLPSS*PTRTFQGGLES
Trigger: GCTCTCGAGTCCACCCTGAAACGTACGAGTGGGCCAGGAAGATGGCAGTGGATGCCTTAGAATACGATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GCAGTGAACAGTCATCCCCACCTTCACTCGCTCCTCTaGCCTCTTCACCACCTTGTCACTGAGGAATTTGGT +
Preference number: 6 (lower is better)
Translates to: AVNSHPHLHSLL*PLHHLVTEEFG
Trigger: ACCAAATTCCTCAGTGACAAGGTGGTGAAGAGGCCAGAGGAGCGAGTGAAGGTGGGGATGACTGTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp CACTTCTCATCCCACTGCCACACCCTCCACAGGTCATaGATGTGCAGCTCAGGTTCCACATACTCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: HFSSHCHTLHRS*MCSSGSTYSFR
Trigger: CCGAAAGGAGTATGTGGAACCTGAGCTGCACATCAATGACCTGTGGAGGGTGTGGCAGTGGGATGAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp ATGGTGAGCAGCCCTTCATCCTCAGCCAGGCCTATCTaGAGGAACTGGTCGTCTCTCAGCTCTTTAACAGGC +
Preference number: 6 (lower is better)
Translates to: MVSSPSSSARPI*RNWSSLSSLTG
Trigger: GCCTGTTAAAGAGCTGAGAGACGACCAGTTCCTCAAGATAGGCCTGGCTGAGGATGAAGGGCTGCTCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp GCACGGTTGACATCCACCCCGACCTCATTGACCCGGTaGATGAATTCACAGTACAAGGCGTTAAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: ARLTSTPTSLTR*MNSQYKALSSS
Trigger: GGAGCTGCTTAACGCCTTGTACTGTGAATTCATCAACCGGGTCAATGAGGTCGGGGTGGATGTCAACCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp CTAGGCTCGTACATCTCAAAGATGCTCCTGCGACTCACACGTTTCTaGGTGGTCTTCTTGGGGCGCACTCGGATCTCACCTTCAGTCTCA +
Preference number: 6 (lower is better)
Translates to: LGSYISKMLLRLTRF*VVFLGRTRISPSVS
Trigger: TGAGACTGAAGGTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGATGTACGAGCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp AGCTCGCTCAATGGCCATAGTGCGCTGCCGGTTCCATTCCTGTACTaGGTGGCTGAACTCATCCCGGTAGTAAAACTGCTTGATCTCCTC +
Preference number: 6 (lower is better)
Translates to: SSLNGHSALPVPFLY*VAELIPVVKLLDLL
Trigger: GAGGAGATCAAGCAGTTTTACTACCGGGATGAGTTCAGCCACCAAGTACAGGAATGGAACCGGCAGCGCACTATGGCCATTGAGCGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp ACTTCTCATCCCACTGCCACACCCTCCACAGGTCATTaGTGTGCAGCTCAGGTTCCACATACTCCTTTCGGT +
Preference number: 6 (lower is better)
Translates to: TSHPTATPSTGH*CAAQVPHTPFG
Trigger: ACCGAAAGGAGTATGTGGAACCTGAGCTGCACATCAATGACCTGTGGAGGGTGTGGCAGTGGGATGAGAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp CCAATAGAAGACAGCTGTTGGCCTTGGTCCAGCTCATaGACTATCCGCTTCACATCCTCAGTCAGCATCTGG +
Preference number: 6 (lower is better)
Translates to: PIEDSCWPWSSS*TIRFTSSVSIW
Trigger: CCAGATGCTGACTGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp GGCTGTCCGGAGGTCCTTATACCTACAACTGAGCTCTaGTCGGATGTCATACAGTGTGATGTGCTTGTCACC +
Preference number: 6 (lower is better)
Translates to: GCPEVLIPTTEL*SDVIQCDVLVT
Trigger: GGTGACAAGCACATCACACTGTATGACATCCGAGCAGAGCTCAGTTGTAGGTATAAGGACCTCCGGACAGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ACATCTCAAAGATGCTCCTGCGACTCACACGTTTCTTaGTGGTCTTCTTGGGGCGCACTCGGATCTCACCTT +
Preference number: 6 (lower is better)
Translates to: TSQRCSCDSHVS*WSSWGALGSHL
Trigger: AAGGTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp TGCAACCATGTATCGGGCACCTTCAAGCACAGCTTCTaGTGTAGGGAACTGGCTGCACACGTAATCTTTGGC +
Preference number: 6 (lower is better)
Translates to: CNHVSGTFKHSF*CRELAAHVIFG
Trigger: GCCAAAGATTACGTGTGCAGCCAGTTCCCTACACCAGAAGCTGTGCTTGAAGGTGCCCGATACATGGTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp TCCTCTTCTCTCCATGCAGTTCGCCGCTTGGTAAAATaGGGCAGGCGGAGGAAATCAGTCACTTCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: SSSLHAVRRLVK*GRRRKSVTSPS
Trigger: TGAAGGAGAAGTGACTGATTTCCTCCGCCTGCCCCATTTTACCAAGCGGCGAACTGCATGGAGAGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp TCATGCACTATCCGCTTCACATCCTCAGTCAGCATCTaGGCATCCCTGTTCTCTCCTGCGATAGTGACCACA +
Preference number: 6 (lower is better)
Translates to: SCTIRFTSSVSI*ASLFSPAIVTT
Trigger: TGTGGTCACTATCGCAGGAGAGAACAGGGATGCCCAGATGCTGACTGAGGATGTGAAGCGGATAGTGCATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GAGCTGCACACCTGGGCAAATTCTATCAGAGGGTCTTaGATACGCCGGGCTAGAGAGACAGCTTGTCTCAAA +
Preference number: 6 (lower is better)
Translates to: ELHTWANSIRGS*IRRARETACLK
Trigger: TTTGAGACAAGCTGTCTCTCTAGCCCGGCGTATCCAAGACCCTCTGATAGAATTTGCCCAGGTGTGCAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TACATCTCAAAGATGCTCCTGCGACTCACACGTTTCTaGGTGGTCTTCTTGGGGCGCACTCGGATCTCACCT +
Preference number: 6 (lower is better)
Translates to: YISKMLLRLTRF*VVFLGRTRISP
Trigger: AGGTGAGATCCGAGTGCGCCCCAAGAAGACCACCAAGAAACGTGTGAGTCGCAGGAGCATCTTTGAGATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TGGGCAATGGCACGGTTGACATCCACCCCGACCTCATaGACCCGGTTGATGAATTCACAGTACAAGGCGTTA +
Preference number: 6 (lower is better)
Translates to: WAMARLTSTPTS*TRLMNSQYKAL
Trigger: TAACGCCTTGTACTGTGAATTCATCAACCGGGTCAATGAGGTCGGGGTGGATGTCAACCGTGCCATTGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp CTCATTGTCAACCAGCTCCACCCCAATAGAAGACAGCTGTTGGCCTaGGTCCAGCTCATGCACTATCCGCTTCACATCCTCAGTCAGCAT +
Preference number: 6 (lower is better)
Translates to: LIVNQLHPNRRQLLA*VQLMHYPLHILSQH
Trigger: ATGCTGACTGAGGATGTGAAGCGGATAGTGCATGAGCTGGACCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCTGGTTGACAATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp TGGGCAATGGCACGGTTGACATCCACCCCGACCTCATTGACCCGGTaGATGAATTCACAGTACAAGGCGTTAAGCAGCTCCTCTTTCACA +
Preference number: 6 (lower is better)
Translates to: WAMARLTSTPTSLTR*MNSQYKALSSSSFT
Trigger: TGTGAAAGAGGAGCTGCTTAACGCCTTGTACTGTGAATTCATCAACCGGGTCAATGAGGTCGGGGTGGATGTCAACCGTGCCATTGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp AGCCGCTCTGGGTTTTCCAAGATTTCCTCAAGGGCTCCAGCAGGATaGGCATCTTCTGCAGACTCATCGTATTCTAAGGCATCCACTGCC +
Preference number: 6 (lower is better)
Translates to: SRSGFSKISSRAPAG*ASSADSSYSKASTA
Trigger: GGCAGTGGATGCCTTAGAATACGATGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCCTTGAGGAAATCTTGGAAAACCCAGAGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp AGGGTGGACTCGAGAGCCATCAAGAACTTCAATGTATaGGTCAGTGCTGTCCCCCAGAGAAGCAGTGTCGAT +
Preference number: 6 (lower is better)
Translates to: RVDSRAIKNFNV*VSAVPQRSSVD
Trigger: ATCGACACTGCTTCTCTGGGGGACAGCACTGACTCATACATTGAAGTTCTTGATGGCTCTCGAGTCCACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp ACGCCATTGTCTAGCCGTGTTTTCACACCAATGGCCTaGCCAGGGCATGATCCACTGTCAAAATGGTTCCAG +
Preference number: 6 (lower is better)
Translates to: TPLSSRVFTPMA*PGHDPLSKWFQ
Trigger: CTGGAACCATTTTGACAGTGGATCATGCCCTGGTCAGGCCATTGGTGTGAAAACACGGCTAGACAATGGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp CACGGTCTAGGTAATCACAGCTGTCCTGGAGGGAGATaGTCGGTGTTGCGAAGGCATTTCTATAGATCCAGT +
Preference number: 6 (lower is better)
Translates to: HGLGNHSCPGGR*SVLRRHFYRSS
Trigger: ACTGGATCTATAGAAATGCCTTCGCAACACCGACCATCTCCCTCCAGGACAGCTGTGATTACCTAGACCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ACTGCCATCTTCCTGGCCCACTCGTACGTTTCAGGGTaGACTCGAGAGCCATCAAGAACTTCAATGTATGAG +
Preference number: 6 (lower is better)
Translates to: TAIFLAHSYVSG*TREPSRTSMYE
Trigger: CTCATACATTGAAGTTCTTGATGGCTCTCGAGTCCACCCTGAAACGTACGAGTGGGCCAGGAAGATGGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp AACCACCTGAAGAGTCCATTCACAGTTGGGAAAATCTaGCCCCGGTACCGGAATCCTTCAGGAGTCACTGTT +
Preference number: 6 (lower is better)
Translates to: NHLKSPFTVGKI*PRYRNPSGVTV
Trigger: AACAGTGACTCCTGAAGGATTCCGGTACCGGGGCCAGATTTTCCCAACTGTGAATGGACTCTTCAGGTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp AATGGCCATAGTGCGCTGCCGGTTCCATTCCTGTACTaGGTGGCTGAACTCATCCCGGTAGTAAAACTGCTT +
Preference number: 6 (lower is better)
Translates to: NGHSALPVPFLY*VAELIPVVKLL
Trigger: AAGCAGTTTTACTACCGGGATGAGTTCAGCCACCAAGTACAGGAATGGAACCGGCAGCGCACTATGGCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp CTGATGTCAATGGTGAGCAGCCCTTCATCCTCAGCCAGGCCTATCTaGAGGAACTGGTCGTCTCTCAGCTCTTTAACAGGCTTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: LMSMVSSPSSSARPI*RNWSSLSSLTGLFF
Trigger: AAAGAACAAGCCTGTTAAAGAGCTGAGAGACGACCAGTTCCTCAAGATAGGCCTGGCTGAGGATGAAGGGCTGCTCACCATTGACATCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp TCTGCCTCTGATTTCTTGCTGTTCATGTACAGAATGGCCAGCTCATaGTCAACCAGCTCCACCCCAATAGAAGACAGCTGTTGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SASDFLLFMYRMASS*STSSTPIEDSCWPW
Trigger: CCAAGGCCAACAGCTGTCTTCTATTGGGGTGGAGCTGGTTGACAATGAGCTGGCCATTCTGTACATGAACAGCAAGAAATCAGAGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp CTGAACTTTTCAATATCGATCTTCATGATCCGGCAGTaGACAGTCATCCCCACCTTCACTCGCTCCTCTGGC +
Preference number: 6 (lower is better)
Translates to: LNFSISIFMIRQ*TVIPTFTRSSG
Trigger: GCCAGAGGAGCGAGTGAAGGTGGGGATGACTGTTCACTGCCGGATCATGAAGATCGATATTGAAAAGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp ATTTGTGGTTCAGAAGGTCTCGAGCAAAGGAAGCCATaGGCTGGACATAGCGGGCAACAATCTCATCCAAGT +
Preference number: 6 (lower is better)
Translates to: ICGSEGLEQRKP*AGHSGQQSHPS
Trigger: ACTTGGATGAGATTGTTGCCCGCTATGTCCAGCCCATGGCTTCCTTTGCTCGAGACCTTCTGAACCACAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GGTCCGTGTTCTGTTACTGCTACTGGGAGTGATGCCTaGTACAGGATCCTGATAGTGATCCTTAAACCACCT +
Preference number: 6 (lower is better)
Translates to: GPCSVTATGSDA*YRILIVILKPP
Trigger: AGGTGGTTTAAGGATCACTATCAGGATCCTGTACCAGGCATCACTCCCAGTAGCAGTAACAGAACACGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp CAAGGGATGAAACTTGAGACACAGGATGTCTTCATCTaGGCTGCACACCTGGGCAAATTCTATCAGAGGGTC +
Preference number: 6 (lower is better)
Translates to: QGMKLETQDVFI*AAHLGKFYQRV
Trigger: GACCCTCTGATAGAATTTGCCCAGGTGTGCAGCTCAGATGAAGACATCCTGTGTCTCAAGTTTCATCCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp TCACCTTTACTGCTGGGCCGAATGATAACATCCCCTTaGTCCATGGTCTCCATCATCTTTTCTGCTTGCTTG +
Preference number: 6 (lower is better)
Translates to: SPLLLGRMITSP*SMVSIIFSACL
Trigger: CAAGCAAGCAGAAAAGATGATGGAGACCATGGACCAAGGGGATGTTATCATTCGGCCCAGCAGTAAAGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp GCCGTCAGCAAGAGGTTTGTCAGGGTCAGCAGAGATTaGCTCATACTGATAAGCCTGCATCTTCTCAAACAG +
Preference number: 6 (lower is better)
Translates to: AVSKRFVRVSRD*LILISLHLLKQ
Trigger: CTGTTTGAGAAGATGCAGGCTTATCAGTATGAGCAAATCTCTGCTGACCCTGACAAACCTCTTGCTGACGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp AGTGGGCCTCATCCACATCCTTTCTACCTTTCTTGGTaGGGGTTATGTTTAGCTTGGCTCTCTCCTGAAAGG +
Preference number: 6 (lower is better)
Translates to: SGPHPHPFYLSW*GLCLAWLSPER
Trigger: CCTTTCAGGAGAGAGCCAAGCTAAACATAACCCCAACCAAGAAAGGTAGAAAGGATGTGGATGAGGCCCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp GGGTTTTCCAAGATTTCCTCAAGGGCTCCAGCAGGATaGGCATCTTCTGCAGACTCATCGTATTCTAAGGCA +
Preference number: 6 (lower is better)
Translates to: GFSKISSRAPAG*ASSADSSYSKA
Trigger: TGCCTTAGAATACGATGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCCTTGAGGAAATCTTGGAAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp CTGCTTTCGTTTCATATCCTCTTCCTGCTTGTGGTCTaGAGCTTCCGCATCAAAGTCATAGTAGGTGTCCTT +
Preference number: 6 (lower is better)
Translates to: LLSFHILFLLVV*SFRIKVIVGVL
Trigger: AAGGACACCTACTATGACTTTGATGCGGAAGCTGCAGACCACAAGCAGGAAGAGGATATGAAACGAAAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS GCA 72 bp TGCTTGCTTGAAATTTATGTTATGGAAGGACGGGTGTaGAATCACTCGCTTGATGTATGTGGTCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: CLLEIYVMEGRV*NHSLDVCGPLL
Trigger: CAGCAGCGGACCACATACATCAAGCGAGTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CCA 72 bp GGTTTTCCAAGATTTCCTCAAGGGCTCCAGCAGGATTaGCATCTTCTGCAGACTCATCGTATTCTAAGGCAT +
Preference number: 6 (lower is better)
Translates to: GFPRFPQGLQQD*HLLQTHRILRH
Trigger: ATGCCTTAGAATACGATGAGTCTGCAGAAGATGCCAATCCTGCTGGAGCCCTTGAGGAAATCTTGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TTCACCTTTACTGCTGGGCCGAATGATAACATCCCCTaGGTCCATGGTCTCCATCATCTTTTCTGCTTGCTT +
Preference number: 6 (lower is better)
Translates to: FTFTAGPNDNIP*VHGLHHLFCLL
Trigger: AAGCAAGCAGAAAAGATGATGGAGACCATGGACCAAGGGGATGTTATCATTCGGCCCAGCAGTAAAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp AACTTCTTGGTGACTCTAGGTACCACCTCGCCTTCATaGTTGTATTCTTCTTCTGACTCTTCGGCCTCACTT +
Preference number: 6 (lower is better)
Translates to: NFLVTLGTTSPS*LYSSSDSSASL
Trigger: AAGTGAGGCCGAAGAGTCAGAAGAAGAATACAATCATGAAGGCGAGGTGGTACCTAGAGTCACCAAGAAGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp TTATGTTATGGAAGGACGGGTGTGCAATCACTCGCTTaGTGTATGTGGTCCGCTGCTGCTTTCGTTTCATAT +
Preference number: 6 (lower is better)
Translates to: LCYGRTGVQSLA*CMWSAAAFVSY
Trigger: ATATGAAACGAAAGCAGCAGCGGACCACATACATCAAGCGAGTGATTGCACACCCGTCCTTCCATAACATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 72 bp TTTATGTTATGGAAGGACGGGTGTGCAATCACTCGCTaGATGTATGTGGTCCGCTGCTGCTTTCGTTTCATA +
Preference number: 6 (lower is better)
Translates to: FMLWKDGCAITR*MYVVRCCFRFI
Trigger: TATGAAACGAAAGCAGCAGCGGACCACATACATCAAGCGAGTGATTGCACACCCGTCCTTCCATAACATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS TCA 72 bp AGGTACCACCTCGCCTTCATGATTGTATTCTTCTTCTaGCTCTTCGGCCTCACTTTCCACAAAATCAGACAT +
Preference number: 6 (lower is better)
Translates to: RYHLAFMIVFFF*LFGLTFHKIRH
Trigger: ATGTCTGATTTTGTGGAAAGTGAGGCCGAAGAGTCAGAAGAAGAATACAATCATGAAGGCGAGGTGGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5
CDS CAA 90 bp AATGATAACATCCCCTTGGTCCATGGTCTCCATCATCTTTTCTGCTaGCTTGAAATTTATGTTATGGAAGGACGGGTGTGCAATCACTCG +
Preference number: 6 (lower is better)
Translates to: NDNIPLVHGLHHLFC*LEIYVMEGRVCNHS
Trigger: CGAGTGATTGCACACCCGTCCTTCCATAACATAAATTTCAAGCAAGCAGAAAAGATGATGGAGACCATGGACCAAGGGGATGTTATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000002121.5