Pregenerated sensors for SUPT4A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020485Ensembl transcript IDs: ENSMUST00000093955.12, ENSMUST00000141169.2, ENSMUST00000152700.8
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCGCCCAGACACTCCCACTTCACCAGTGGGCAGAGAAAGTGAGATaGCTTAAGGCCGATGTGCTGCTTTCGTGGAGTCTGCTGATTCGG | + |
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Preference number: 1 (lower is better) Translates to: SAQTLPLHQWAEKVR*LKADVLLSWSLLIR Trigger: CCGAATCAGCAGACTCCACGAAAGCAGCACATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACTGGTGAAGTGGGAGTGTCTGGGCGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR TCA 90 bp | TTTGGGGTCCCACGGTTTAGTTCCACAAGAAAACAAGTACAGAAGTaGAGAACAAGATGCTATGGCCTGCACCTAGCTAGGTCTTTATTG | + |
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Preference number: 1 (lower is better) Translates to: FGVPRFSSTRKQVQK*RTRCYGLHLARSLL Trigger: CAATAAAGACCTAGCTAGGTGCAGGCCATAGCATCTTGTTCTTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTCCCACTTCACCGGGGCAGGCGACCAGTaGCGGACACAGCATATACAC | + |
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Preference number: 2 (lower is better) Translates to: SSSVDTASENPPRHSHFTGAGDQ*RTQHIH Trigger: GTGTATATGCTGTGTCCGTCACTGGTCGCCTGCCCC...GGTGAAGTGGGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTCCCACTTCACAAAGGCAAAACCCTaGACACAGGTGGGAAATCAG | + |
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Preference number: 2 (lower is better) Translates to: ASSSVDTASENPPRHSHFTKAKP*TQVGNQ Trigger: CTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGT...GAAGTGGGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAATCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTAGTGGGCAGAGAAAGTaGGATGACTTAAGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: GNQHLPLLTQPLRIRPDTSGQRK*DDLRPM Trigger: CATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACT...AGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCTGAGAATCCGCCCAGACACTCCCACTTCACCAGTGGGCAGAGAAAGTGAGAAACAAGTACAGAAGTaGAGAACAAGATGCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: PLRIRPDTPTSPVGRESEKQVQK*RTRCYG Trigger: GCCATAGCATCTTGTTCTTCACTTCTGTACTTGTTT...CTCACTTTCTCTGCCCACTGGTGAAGTGGGAGTGTCTGGGCGGATTCTCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCATCTTCCAGTGGGCAGAGAAAGTaGGATGACTTAAGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: LPIDKGKTLNTGGKSASSSGQRK*DDLRPM Trigger: CATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACT...GGAAGATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCATCAGTGGGCAGAGAAAGTaGGATGACTTAAGGCCGATG | + |
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Preference number: 2 (lower is better) Translates to: SPAHRQRQNPEHRWEISISGQRK*DDLRPM Trigger: CATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACT...GATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCATCTCGCTTTATTGGTATTTaGACCAAAGTCCTGCCCATA | + |
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Preference number: 2 (lower is better) Translates to: VLPIDKGKTLNTGGKSASRFIGI*TKVLPI Trigger: TATGGGCAGGACTTTGGTTCAAATACCAATAAAGCG...AGATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR TCA 90 bp | TCGCTTTATTGGTATTTGAACCAAAGTCCTGCCCATAGACAAAGGCAAAACCCTAAACAAGTACAGAAGTaGAGAACAAGATGCTATGGC | + |
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Preference number: 2 (lower is better) Translates to: SLYWYLNQSPAHRQRQNPKQVQK*RTRCYG Trigger: GCCATAGCATCTTGTTCTTCACTTCTGTACTTGTTT...AGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGTTCAAATACCAATAAAGCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTCCCACCTCCCGCACGATTCCTaGGGGCAGGCGACCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: SASSSVDTASENPPRHSHLPHDS*GQATSD Trigger: GTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAG...GTGGGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR-3UTR CAA 90 bp | ACCAAAGTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCACTCCCGCACGATTCCTaGGGGCAGGCGACCAGTGAC | + |
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Preference number: 3 (lower is better) Translates to: TKVLPIDKGKTLNTGGKSLPHDS*GQATSD Trigger: GTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAG...TGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR TCA 72 bp | CCCAGACACTCCCACTTCACCAGTGGGCAGAGAAAGTaGGATGACTTAAGGCCGATGTGCTGCTTTCGTGGA | + |
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Preference number: 3 (lower is better) Translates to: PRHSHFTSGQRK*DDLRPMCCFRG Trigger: TCCACGAAAGCAGCACATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACTGGTGAAGTGGGAGTGTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR TCA 72 bp | ACACTCCCACTTCACCAGTGGGCAGAGAAAGTGAGATaGCTTAAGGCCGATGTGCTGCTTTCGTGGAGTCTG | + |
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Preference number: 3 (lower is better) Translates to: TLPLHQWAEKVR*LKADVLLSWSL Trigger: CAGACTCCACGAAAGCAGCACATCGGCCTTAAGTCATCTCACTTTCTCTGCCCACTGGTGAAGTGGGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR TCA 72 bp | CCACGGTTTAGTTCCACAAGAAAACAAGTACAGAAGTaGAGAACAAGATGCTATGGCCTGCACCTAGCTAGG | + |
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Preference number: 3 (lower is better) Translates to: PRFSSTRKQVQK*RTRCYGLHLAR Trigger: CCTAGCTAGGTGCAGGCCATAGCATCTTGTTCTTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| 3UTR TCA 72 bp | TTTAAGTATGTTCCAAAGGCTCGCTTTATTGGTATTTaGACCAAAGTCCTGCCCATAGACAAAGGCAAAACC | + |
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Preference number: 3 (lower is better) Translates to: FKYVPKARFIGI*TKVLPIDKGKT Trigger: GGTTTTGCCTTTGTCTATGGGCAGGACTTTGGTTCAAATACCAATAAAGCGAGCCTTTGGAACATACTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | CATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTCCCACTTCAAGCCCAAGCCTGCCCTaGTGGAGGGGGCCACAGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLPLLTQPLRIRPDTPTSSPSLP*WRGPQQ Trigger: CTGCTGTGGCCCCCTCCAGCAGGGCAGGCTTGGGCT...TGAAGTGGGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000141169.2 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCGTCAGCCCAAGCCTaGCCTGCTGGAGGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: TKVLPIDKGKTLNTGGKSASAQA*PAGGGH Trigger: GTGGCCCCCTCCAGCAGGGCAGGCTTGGGCTGACGC...TGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141169.2 |
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| CDS-3UTR TCA 90 bp | GGAAATCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTGGGGCAGGCGACCAGTaGCGGACACAGCATATACAC | + |
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Preference number: 4 (lower is better) Translates to: GNQHLPLLTQPLRIRPDTGAGDQ*RTQHIH Trigger: GTGTATATGCTGTGTCCGTCACTGGTCGCCTGCCCC...AGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093955.12 |
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| CDS-3UTR TCA 90 bp | GAGTCTTTGGGGTCCCACGGTTTAGTTCCACAAGAAAACAAGTACAGAAGTGAAGGGGGCGTCGTCTCATaGTGCAGCAGAAGGCTACCC | + |
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Preference number: 4 (lower is better) Translates to: ESLGSHGLVPQENKYRSEGGVVS*CSRRLP Trigger: GGGTAGCCTTCTGCTGCATCATGAGACGACGCCCCC...TTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAAAGACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | AACACAGGTGGGAAATCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGAAACAAGCCCGCAGATaGCGCAGGTCCTTTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: NTGGKSASSSVDTASENPKQARR*RRSFGT Trigger: GGTACCAAAGGACCTGCGGCATCTGCGGGCTTGTTT...CGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTTCCCACCTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | AAATCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCCCAGACACTCCGCTAGGACTGAAGGCTaGATCAACACAACCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: KSASSSVDTASENPPRHSARTEG*INTTSF Trigger: GAAGCTGGTTGTGTTGATGCAGCCTTCAGTCCTAGC...GGAGTGTCTGGGCGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | ACAAGATGCTATGGCCTGCACCTAGCTAGGTCTTTATTGCTGTGTCTCTGGATTAAACAAGCCCGCAGATaGCGCAGGTCCTTTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: TRCYGLHLARSLLLCLWIKQARR*RRSFGT Trigger: GGTACCAAAGGACCTGCGGCATCTGCGGGCTTGTTT...AATCCAGAGACACAGCAATAAAGACCTAGCTAGGTGCAGGCCATAGCATCTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | TCGCTTTATTGGTATTTGAACCAAAGTCCTGCCCATAGACAAAGGCAAAACCCTAAACAAGCCCGCAGATaGCGCAGGTCCTTTGGTACC | + |
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Preference number: 4 (lower is better) Translates to: SLYWYLNQSPAHRQRQNPKQARR*RRSFGT Trigger: GGTACCAAAGGACCTGCGGCATCTGCGGGCTTGTTT...AGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGTTCAAATACCAATAAAGCGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR TCA 90 bp | CAAAGTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCGACTCATCATCGCAATaGTTCCATCAAATGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QSPAHRQRQNPEHRWEISDSSSQ*FHQMKS Trigger: GCTCTTCATTTGATGGAATCATTGCGATGATGAGTC...GCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000093955.12 |
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| CDS-3UTR GCA 90 bp | AACACAGGTGGGAAATCAGCATCTTCCTCTGTTGACACAGCCTCTGAGAATCCGCAAATGAAGAGCTGGTaGAGTCATAAACCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NTGGKSASSSVDTASENPQMKSW*SHKPSL Trigger: GAGAGATGGTTTATGACTGCACCAGCTCTTCATTTG...CGGATTCTCAGAGGCTGTGTCAACAGAGGAAGATGCTGATTTCCCACCTGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | AGTCCTGCCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCATCAAACCATCTCTCTGTTaGCCTTCATTTGTAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: SPAHRQRQNPEHRWEISIKPSLC*PSFVGM Trigger: CATACCTACAAATGAAGGGCAACAGAGAGATGGTTT...GATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGGCAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCCCACGGTTTAGTTCCACAAGAAAACAAGTACAGAAGTGAAGAACAACAAATGAAGAGCTGGTaGAGTCATAAACCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: LGSHGLVPQENKYRSEEQQMKSW*SHKPSL Trigger: GAGAGATGGTTTATGACTGCACCAGCTCTTCATTTG...TTGTTCTTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | TCGCTTTATTGGTATTTGAACCAAAGTCCTGCCCATAGACAAAGGCAAAACCCTCAAATGAAGAGCTGGTaGAGTCATAAACCATCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SLYWYLNQSPAHRQRQNPQMKSW*SHKPSL Trigger: GAGAGATGGTTTATGACTGCACCAGCTCTTCATTTG...AGGGTTTTGCCTTTGTCTATGGGCAGGACTTTGGTTCAAATACCAATAAAGCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR GCA 90 bp | TTGGGGTCCCACGGTTTAGTTCCACAAGAAAACAAGTACAGAAGTGAAGAACAAAAACCATCTCTCTGTTaGCCTTCATTTGTAGGTATG | + |
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Preference number: 4 (lower is better) Translates to: LGSHGLVPQENKYRSEEQKPSLC*PSFVGM Trigger: CATACCTACAAATGAAGGGCAACAGAGAGATGGTTT...TTGTTCTTCACTTCTGTACTTGTTTTCTTGTGGAACTAAACCGTGGGACCCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000093955.12 ENSMUST00000141169.2 ENSMUST00000152700.8 |
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| CDS-3UTR CAA 90 bp | CCCATAGACAAAGGCAAAACCCTGAACACAGGTGGGAAATCAGCATCTTCCTCTCTCCCGCACGATTCCTaGGGGCAGGCGACCAGTGAC | + |
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Preference number: 5 (lower is better) Translates to: PIDKGKTLNTGGKSASSSLPHDS*GQATSD Trigger: GTCACTGGTCGCCTGCCCCAAGGAATCGTGCGGGAG...AGAGGAAGATGCTGATTTCCCACCTGTGTTCAGGGTTTTGCCTTTGTCTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093955.12 |
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| CDS CCA 72 bp | AGAGGAAGACAAAGCGTCAGCCCAAGCCTGCCCTGCTaGAGGGGGCCACAGCAGCTCCCCAAAGCAACAGCC | + |
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Preference number: 6 (lower is better) Translates to: RGRQSVSPSLPC*RGPQQLPKATA Trigger: GGCTGTTGCTTTGGGGAGCTGCTGTGGCCCCCTCCAGCAGGGCAGGCTTGGGCTGACGCTTTGTCTTCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000141169.2 |
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| CDS CAA 72 bp | CAGAAGGCTACCCGACACTTGTGTCCCCTGCTCAGCTaGAGAGCTAGGACTGAAGGCTGCATCAACACAACC | + |
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Preference number: 6 (lower is better) Translates to: QKATRHLCPLLS*RARTEGCINTT Trigger: GGTTGTGTTGATGCAGCCTTCAGTCCTAGCTCTCAAGCTGAGCAGGGGACACAAGTGTCGGGTAGCCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152700.8 |
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| CDS CAA 72 bp | CATCAACACAACCAGCTTCGTCATTCATTGTCAGCCTaGAACGGCCATCAAATGAAGAGCTGGTGCAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: HQHNQLRHSLSA*NGHQMKSWCSH Trigger: ATGACTGCACCAGCTCTTCATTTGATGGCCGTTCAAGGCTGACAATGAATGACGAAGCTGGTTGTGTTGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152700.8 |
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| CDS GCA 72 bp | TTGTCAGCCTTGAACGGCCATCAAATGAAGAGCTGGTaGAGTCATAAACCATCTCTCTGTTGCCCTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: LSALNGHQMKSW*SHKPSLCCPSF Trigger: AAATGAAGGGCAACAGAGAGATGGTTTATGACTGCACCAGCTCTTCATTTGATGGCCGTTCAAGGCTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152700.8 |
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