Pregenerated sensors for SUPT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038954Ensembl transcript IDs: ENSMUST00000050630.14, ENSMUST00000127798.8, ENSMUST00000129416.2
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGGAGAGAGGGCCAATCTTGTGGCCGTAGCGTCGAATGGCCTCTCTaGTGTGGCAGGGCTGGATGGCATCGCTGTGAGCCTCGACACCAC | + |
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Preference number: 5 (lower is better) Translates to: GREGQSCGRSVEWPL*CGRAGWHRCEPRHH Trigger: GTGGTGTCGAGGCTCACAGCGATGCCATCCAGCCCTGCCACATCAGAGAGGCCATTCGACGCTACGGCCACAAGATTGGCCCTCTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 90 bp | CGTCGAATGGCCTCTCTGATGTGGCAGGGCTGGATGGCATCGCTGTaGGCCTCGACACCACAGGCCGCAGTGCTCTTTTTCCTCTTCCGC | + |
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Preference number: 5 (lower is better) Translates to: RRMASLMWQGWMASL*ASTPQAAVLFFLFR Trigger: GCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGGTGTCGAGGCTCACAGCGATGCCATCCAGCCCTGCCACATCAGAGAGGCCATTCGACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS GCA 90 bp | AGGGCTGGATGGCATCGCTGTGAGCCTCGACACCACAGGCCGCAGTaGTCTTTTTCCTCTTCCGCTGCTTGGTTTTGGCAGTGTCTTGTC | + |
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Preference number: 5 (lower is better) Translates to: RAGWHRCEPRHHRPQ*SFSSSAAWFWQCLV Trigger: GACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGGTGTCGAGGCTCACAGCGATGCCATCCAGCCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS TCA 90 bp | AGGAGGAGGTGTGTTCTCAGGAGAGTCTGGGCTGGACTTCAAACATaGGGACCCCTCAGCAGAGTTGTGGTACTGAATGAAGGTTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RRRCVLRRVWAGLQT*GPLSRVVVLNEGCR Trigger: TCTGCAACCTTCATTCAGTACCACAACTCTGCTGAGGGGTCCTCATGTTTGAAGTCCAGCCCAGACTCTCCTGAGAACACACCTCCTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 90 bp | ATTGCCAGCAGCTCTCCTGTCTGGTCGATAGAGTTGATCAAGTCCTaGGCGATCTTCTGTCTCTTGTTTGTACCGCTGCTGCCACTCAGT | + |
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Preference number: 5 (lower is better) Translates to: IASSSPVWSIELIKS*AIFCLLFVPLLPLS Trigger: ACTGAGTGGCAGCAGCGGTACAAACAAGAGACAGAAGATCGCTCAGGACTTGATCAACTCTATCGACCAGACAGGAGAGCTGCTGGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 90 bp | AAGAGCCAGATCCACCAGCTGGGCCACGGTTTCGTATGCCAGATATaGCAGGATTTCCATAGCTATGACATTGGGTTTTATCTCCATGCT | + |
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Preference number: 5 (lower is better) Translates to: KSQIHQLGHGFVCQI*QDFHSYDIGFYLHA Trigger: AGCATGGAGATAAAACCCAATGTCATAGCTATGGAAATCCTGGCATATCTGGCATACGAAACCGTGGCCCAGCTGGTGGATCTGGCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 90 bp | CATTCTCTCCTGTTTGACATCATCAAGCTCGTTGTCTTCAAACATTaGCAGCAGCTCTCCTGTCTGGTCGATAGAGTTGATCAAGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: HSLLFDIIKLVVFKH*QQLSCLVDRVDQVL Trigger: CAGGACTTGATCAACTCTATCGACCAGACAGGAGAGCTGCTGGCAATGTTTGAAGACAACGAGCTTGATGATGTCAAACAGGAGAGAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 90 bp | TTTTTGGAGAAACTTAACTGTCGGCTTTCACAGAATTCTGCATATTaGGCTGAATCCATAGTACGAGTCTGTCTTTCTGCTCTCTCCATT | + |
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Preference number: 5 (lower is better) Translates to: FLEKLNCRLSQNSAY*AESIVRVCLSALSI Trigger: AATGGAGAGAGCAGAAAGACAGACTCGTACTATGGATTCAGCTCAATATGCAGAATTCTGTGAAAGCCGACAGTTAAGTTTCTCCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 72 bp | GCCTCTCTGATGTGGCAGGGCTGGATGGCATCGCTGTaGGCCTCGACACCACAGGCCGCAGTGCTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: ASLMWQGWMASL*ASTPQAAVLFF Trigger: GAAAAAGAGCACTGCGGCCTGTGGTGTCGAGGCTCACAGCGATGCCATCCAGCCCTGCCACATCAGAGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | TGGCATCGCTGTGAGCCTCGACACCACAGGCCGCAGTaGTCTTTTTCCTCTTCCGCTGCTTGGTTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WHRCEPRHHRPQ*SFSSSAAWFWQ Trigger: CTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGGTGTCGAGGCTCACAGCGATGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | TGTGAGCCTCGACACCACAGGCCGCAGTGCTCTGAATaGTGTGATCCAGAAGAGGGAGCTGTTGGTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: CEPRHHRPQCSE*CDPEEGAVGVG Trigger: TCCTACACCAACAGCTCCCTCTTCTGGATCACAGCATTCAGAGCACTGCGGCCTGTGGTGTCGAGGCTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127798.8 |
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| CDS GCA 72 bp | ACACCACAGGCCGCAGTGCTCTTTTTCCTCTTCCGCTaGTTGGTTTTGGCAGTGTCTTGTCCTGTGTTCCCA | + |
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Preference number: 6 (lower is better) Translates to: TPQAAVLFFLFR*LVLAVSCPVFP Trigger: TGGGAACACAGGACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS CCA 72 bp | CACAGGCCGCAGTGCTCTTTTTCCTCTTCCGCTGCTTaGTTTTGGCAGTGTCTTGTCCTGTGTTCCCATTCC | + |
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Preference number: 6 (lower is better) Translates to: HRPQCSFSSSAA*FWQCLVLCSHS Trigger: GGAATGGGAACACAGGACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS CAA 72 bp | GTTGCAGAAATGGCATGGCTGAAGGGGTCCCCTGCCTaGGACACCATATCTTGCCTCACTAGAAGAGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: VAEMAWLKGSPA*DTISCLTRRAR Trigger: TCTGGCTCTTCTAGTGAGGCAAGATATGGTGTCCAAGGCAGGGGACCCCTTCAGCCATGCCATTTCTGCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS CAA 72 bp | CCACAGGCCGCAGTGCTCTTTTTCCTCTTCCGCTGCTaGGTTTTGGCAGTGTCTTGTCCTGTGTTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: PQAAVLFFLFRC*VLAVSCPVFPF Trigger: GAATGGGAACACAGGACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS CAA 72 bp | GCCGCAGTGCTCTTTTTCCTCTTCCGCTGCTTGGTTTaGGCAGTGTCTTGTCCTGTGTTCCCATTCCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AAVLFFLFRCLV*AVSCPVFPFPK Trigger: TTTGGGGAATGGGAACACAGGACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS CAA 90 bp | ACACCACAGGCCGCAGTGCTCTTTTTCCTCTTCCGCTGCTTGGTTTaGGCAGTGTCTTGTCCTGTGTTCCCATTCCCCAAAGAACCAGAT | + |
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Preference number: 6 (lower is better) Translates to: TPQAAVLFFLFRCLV*AVSCPVFPFPKEPD Trigger: ATCTGGTTCTTTGGGGAATGGGAACACAGGACAAGACACTGCCAAAACCAAGCAGCGGAAGAGGAAAAAGAGCACTGCGGCCTGTGGTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | CCTGAGCGATCTTCTGTCTCTTGTTTGTACCGCTGCTaGCACTCAGTTTTTCTTCCAGGAGGTCATCCTCGT | + |
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Preference number: 6 (lower is better) Translates to: PERSSVSCLYRC*HSVFLPGGHPR Trigger: ACGAGGATGACCTCCTGGAAGAAAAACTGAGTGGCAGCAGCGGTACAAACAAGAGACAGAAGATCGCTCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | CCATTCCCCAAAGAACCAGATGCAGCTCTACCTGAATaGTGTGATCCAGAAGAGGGAGCTGTTGGTGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: PFPKEPDAALPE*CDPEEGAVGVG Trigger: TCCTACACCAACAGCTCCCTCTTCTGGATCACAGCATTCAGGTAGAGCTGCATCTGGTTCTTTGGGGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050630.14 ENSMUST00000129416.2 |
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| CDS TCA 72 bp | AGCTCTCCTGTCTGGTCGATAGAGTTGATCAAGTCCTaGGCGATCTTCTGTCTCTTGTTTGTACCGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSPVWSIELIKS*AIFCLLFVPLL Trigger: CAGCAGCGGTACAAACAAGAGACAGAAGATCGCTCAGGACTTGATCAACTCTATCGACCAGACAGGAGAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 72 bp | TTCAAACATGAGGACCCCTCAGCAGAGTTGTGGTACTaGATGAAGGTTGCAGAAATGGCATGGCTGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: FKHEDPSAELWY*MKVAEMAWLKG Trigger: CCCCTTCAGCCATGCCATTTCTGCAACCTTCATTCAGTACCACAACTCTGCTGAGGGGTCCTCATGTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 72 bp | TGTGTTCTCAGGAGAGTCTGGGCTGGACTTCAAACATaGGGACCCCTCAGCAGAGTTGTGGTACTGAATGAA | + |
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Preference number: 6 (lower is better) Translates to: CVLRRVWAGLQT*GPLSRVVVLNE Trigger: TTCATTCAGTACCACAACTCTGCTGAGGGGTCCTCATGTTTGAAGTCCAGCCCAGACTCTCCTGAGAACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | GGCCTCCTAGCATCACCTAGAGAAAACATCATACTCTaGAACTCGGCCGCAAAGCTTATAGTCTTCCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLLASPRENIIL*NSAAKLIVFPA Trigger: TGCAGGGAAGACTATAAGCTTTGCGGCCGAGTTGCAGAGTATGATGTTTTCTCTAGGTGATGCTAGGAGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | AAGAGCCAGATCCACCAGCTGGGCCACGGTTTCGTATaGCAGATATGCCAGGATTTCCATAGCTATGACATT | + |
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Preference number: 6 (lower is better) Translates to: KSQIHQLGHGFV*QICQDFHSYDI Trigger: AATGTCATAGCTATGGAAATCCTGGCATATCTGGCATACGAAACCGTGGCCCAGCTGGTGGATCTGGCTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS CAA 72 bp | CTCTCCATTCTCTCCTGTTTGACATCATCAAGCTCGTaGTCTTCAAACATTGCCAGCAGCTCTCCTGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LSILSCLTSSSS*SSNIASSSPVW Trigger: CCAGACAGGAGAGCTGCTGGCAATGTTTGAAGACAACGAGCTTGATGATGTCAAACAGGAGAGAATGGAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS CAA 90 bp | CTTTCTGCTCTCTCCATTCTCTCCTGTTTGACATCATCAAGCTCGTaGTCTTCAAACATTGCCAGCAGCTCTCCTGTCTGGTCGATAGAG | + |
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Preference number: 6 (lower is better) Translates to: LSALSILSCLTSSSS*SSNIASSSPVWSIE Trigger: CTCTATCGACCAGACAGGAGAGCTGCTGGCAATGTTTGAAGACAACGAGCTTGATGATGTCAAACAGGAGAGAATGGAGAGAGCAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS CAA 90 bp | ACGGTTTCGTATGCCAGATATGCCAGGATTTCCATAGCTATGACATaGGGTTTTATCTCCATGCTGCTGCAGTCCAGCCAGTCTCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: TVSYARYARISIAMT*GFISMLLQSSQSRN Trigger: ATTCCGAGACTGGCTGGACTGCAGCAGCATGGAGATAAAACCCAATGTCATAGCTATGGAAATCCTGGCATATCTGGCATACGAAACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | ATCCACCAGCTGGGCCACGGTTTCGTATGCCAGATATaGCAGGATTTCCATAGCTATGACATTGGGTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: IHQLGHGFVCQI*QDFHSYDIGFY Trigger: ATAAAACCCAATGTCATAGCTATGGAAATCCTGGCATATCTGGCATACGAAACCGTGGCCCAGCTGGTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS CAA 72 bp | TATGCCAGATATGCCAGGATTTCCATAGCTATGACATaGGGTTTTATCTCCATGCTGCTGCAGTCCAGCCAG | + |
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Preference number: 6 (lower is better) Translates to: YARYARISIAMT*GFISMLLQSSQ Trigger: CTGGCTGGACTGCAGCAGCATGGAGATAAAACCCAATGTCATAGCTATGGAAATCCTGGCATATCTGGCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS GCA 72 bp | CTGTTTGACATCATCAAGCTCGTTGTCTTCAAACATTaGCAGCAGCTCTCCTGTCTGGTCGATAGAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LFDIIKLVVFKH*QQLSCLVDRVD Trigger: ATCAACTCTATCGACCAGACAGGAGAGCTGCTGGCAATGTTTGAAGACAACGAGCTTGATGATGTCAAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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| CDS TCA 72 bp | AAACTTAACTGTCGGCTTTCACAGAATTCTGCATATTaGGCTGAATCCATAGTACGAGTCTGTCTTTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: KLNCRLSQNSAY*AESIVRVCLSA Trigger: AGCAGAAAGACAGACTCGTACTATGGATTCAGCTCAATATGCAGAATTCTGTGAAAGCCGACAGTTAAGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050630.14 ENSMUST00000127798.8 ENSMUST00000129416.2 |
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