Pregenerated sensors for SUPT20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027751Ensembl transcript IDs: ENSMUST00000029315.13, ENSMUST00000170552.6, ENSMUST00000197502.5, ENSMUST00000199652.5, ENSMUST00000199655.5, ENSMUST00000199674.5, ENSMUST00000200439.2, ENSMUST00000200441.5
Found 289 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTaGTGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTAT | + |
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Preference number: 1 (lower is better) Translates to: SRLHGTGQCVCYETS*WQKAAAQAFSCRRY Trigger: ATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR GCA 90 bp | TGGGCAGTGTGTTTGCTACGAGACCTCCTGATGGCAGAAGGCCGCTaGACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGTGTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: WAVCLLRDLLMAEGR*TGFFLQEVWPQCHS Trigger: GCTGTGACACTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR CCA 90 bp | GTAAACCAAATGGGATACCTGCTTGAGGAGCCGCCTGCACGGCACTaGGCAGTGTGTTTGCTACGAGACCTCCTGATGGCAGAAGGCCGC | + |
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Preference number: 1 (lower is better) Translates to: VNQMGYLLEEPPARH*AVCLLRDLLMAEGR Trigger: GCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCCCATTTGGTTTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR GCA 90 bp | AGCTGGGCTGTTTGTGCGGCTGCTGCTGCCATAGCCATTTGGTGCTaGAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: SWAVCAAAAAIAIWC*KNRNCCSCCCCCCC Trigger: GCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAAACAGCCCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR TCA 90 bp | TGGGGAAAGCCTCCTACTCCAGTAAGGTTAATAACGGCAGCTTGCTaGGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: WGKPPTPVRLITAAC*AVKACSCAVNPCSE Trigger: TTCTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCGTTATTAACCTTACTGGAGTAGGAGGCTTTCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR GCA 90 bp | TGTAGCTGGGCTGTTTGTGCGGCTGCTGCTGCCATAGCCATTTGGTaGTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: CSWAVCAAAAAIAIW*CKNRNCCSCCCCCC Trigger: ACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAAACAGCCCAGCTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGACAGCAGAGTCTGCCATaGCCGGGGAGAGCGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GYLLEEPPARHWAVCLLRQQSLP*PGRASF Trigger: GAAGCTCGCTCTCCCCGGTCATGGCAGACTCTGCTG...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGCCACTCTTCAGAGCCTaGGCTCCACCAGCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LEEPPARHWAVCLLRDLLPLFRA*APPAEL Trigger: GAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGG...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR CAA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTaGCTACGAGACCTCCTGATGGCAGAAGGCCGCTGCACAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GYLLEEPPARHWAVC*LRDLLMAEGRCTGF Trigger: AAAGCCTGTGCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGGCCCAGCATGGAGTTTaGGCCACTCTTCAGAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQAQHGV*ATLQSL Trigger: CAGGCTCTGAAGAGTGGCTCAAACTCCATGCTGGGC...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR CAA 90 bp | CTCCTCTGGCTGTTGGGAACCGGAAGCTGCAGGCTGCTGAGGTTGTaGTATAAAGTGAGGGAGCTGCGTCTGCTGCTGTTGCTGCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LLWLLGTGSCRLLRL*YKVRELRLLLLLLG Trigger: ACCCAGCAGCAACAGCAGCAGACGCAGCTCCCTCACTTTATACAACAACCTCAGCAGCCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGGTTAACAAAGTGGGCTaGGGGGTGAAGCCTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQVNKVG*GVKPDS Trigger: AGAATCAGGCTTCACCCCTCAGCCCACTTTGTTAAC...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGGTTAACAAAGTGGGCTaGGGGGTGAAGCCTGATTCT | + |
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Preference number: 2 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLVNKVG*GVKPDS Trigger: AGAATCAGGCTTCACCCCTCAGCCCACTTTGTTAAC...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCAGGGTGTGGGACCGATaGAGGGGTTGGTGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VTMVERGMVVTGIAWLRARVWDR*RGWCRR Trigger: CCTCCTACACCAACCCCTTCATCGGTCCCACACCCT...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGTTAACCCTTGTTCAGAACCCTGCTCCTCTGGCTGTTGGGAACCGGAAGCTGGTTGTCACAGGCATTaGCTGGCTCAGAGCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: AVNPCSEPCSSGCWEPEAGCHRH*LAQSPL Trigger: CAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACC...AGCTTCCGGTTCCCAACAGCCAGAGGAGCAGGGTTCTGAACAAGGGTTAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGGTTAAGGCCTGTTCCTaGGCAGTTAACCCTTGTTCA | + |
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Preference number: 2 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLVKACS*AVNPCS Trigger: TGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAAC...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTAGGGTGTGGGACCGATaGAGGGGTTGGTGTAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: LSSFYSLTGCLCAGDDVARVWDR*RGWCRR Trigger: CCTCCTACACCAACCCCTTCATCGGTCCCACACCCT...AGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTTGCTCCTCTGGCTGTTaGGAACCGGAAGCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: LSSFYSLTGCLCAGDDVACSSGC*EPEAAG Trigger: GCCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCA...AGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTCAGAGCTCAGTACACTaGCGGAGGTTAGCCCAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSSFYSLTGCLCAGDDVAQSSVH*RRLAQQ Trigger: CTGCTGGGCTAACCTCCGTCAGTGTACTGAGCTCTG...AGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCCTAGGAGCTGAGTTCTaGGCGTCAGGAGGGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCLGAEF*ASGGCG Trigger: CCCACACCCTCCTGACGCTCAGAACTCAGCTCCTAG...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGTTAACCCTTGTTCAGAACCCTGCTCCTCTGGCTGTTGGGAACCGGAAGCTGGTGTTAAAAATGAGTaGACCACCAGGAAGCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: AVNPCSEPCSSGCWEPEAGVKNE*TTRKLE Trigger: CTCCAGCTTCCTGGTGGTTCACTCATTTTTAACACC...AGCTTCCGGTTCCCAACAGCCAGAGGAGCAGGGTTCTGAACAAGGGTTAACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAAGGAGTTCCAGATCCTaGTCGTTGAGAAAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: GYLLEEPPARHWAVCLLRRSSRS*SLRKIK Trigger: TTTTATTTTTCTCAACGAGCAGGATCTGGAACTCCT...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGACGTTGTTTCTGCGATTaGTATGTACAGGAAAACATT | + |
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Preference number: 2 (lower is better) Translates to: GYLLEEPPARHWAVCLLRRCFCD*YVQENI Trigger: AATGTTTTCCTGTACATACCAATCGCAGAAACAACG...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTATGGTGTAGGAGGAGATaGCTTAGGAGTTCCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: LSQALPGSEPFAAEQTELWCRRR*LRSSRS Trigger: GGATCTGGAACTCCTAAGCCATCTCCTCCTACACCA...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | GGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGTGGTGTAGGAGGAGATaGCTTAGGAGTTCCAGATCC | + |
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Preference number: 2 (lower is better) Translates to: GRYHGRKRNGCHRHCLAQWCRRR*LRSSRS Trigger: GGATCTGGAACTCCTAAGCCATCTCCTCCTACACCA...CTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTAGGGGTACTAGGAGCTaGGTTCTGAGCGTCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: PVVMDVTMVERGMVVTGIRGTRS*VLSVRR Trigger: CCTCCTGACGCTCAGAACTCAGCTCCTAGTACCCCT...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTAGTGCACACACAGCAATaGAAAATACTGACATCTCGG | + |
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Preference number: 2 (lower is better) Translates to: LSQALPGSEPFAAEQTELVHTQQ*KILTSR Trigger: CCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAATCCTTACGTTGTTTCTaGGATTGGTATGTACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: EEWLSQALPGSEPFAAEQSLRCF*DWYVQE Trigger: TTCCTGTACATACCAATCGCAGAAACAACGTAAGGA...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCGTGAAGCCTGATTCTTaGGGAGATGGGGTGGCTGAA | + |
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Preference number: 2 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCVKPDS*GDGVAE Trigger: TTCAGCCACCCCATCTCCCCAAGAATCAGGCTTCAC...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAGTTTGAGCCACTCTTCAGAGCCTGGGCTCCACCAGCAGAGCTCAGTACACACAAGCTATCAGTTATaGCACTCAGATATACATGTT | + |
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Preference number: 2 (lower is better) Translates to: WSLSHSSEPGLHQQSSVHTSYQL*HSDIHV Trigger: AACATGTATATCTGAGTGCCATAACTGATAGCTTGT...GTGTACTGAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGGCTCAAACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGACGATCCAAGAGTGTTaGTACACTCAATTACAATTA | + |
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Preference number: 2 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQTIQEC*YTQLQL Trigger: TAATTGTAATTGAGTGTAGCAACACTCTTGGATCGT...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTGCTGCGTCTGCTGCTGTTaGTGCTGGGTGTTAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: CCKNRNCCSCCCCCCCCCCVCCC*CWVLKM Trigger: CATTTTTAACACCCAGCAGCAACAGCAGCAGACGCA...GCAGCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | CTCTCTTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTAGCAATGCAAAATACTaGCATCTCGGGAAAACAGTA | + |
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Preference number: 2 (lower is better) Translates to: LSSFYSLTGCLCAGDDVASNAKY*HLGKTV Trigger: TACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCT...AGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTGCACACACAGCAATaGAAAATACTGACATCTCGG | + |
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Preference number: 2 (lower is better) Translates to: QENISPCFHVRITGLCFCVHTQQ*KILTSR Trigger: CCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029315.13 ENSMUST00000199674.5 ENSMUST00000200439.2 ENSMUST00000200441.5 |
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| 3UTR-3UTR GCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTCCTTACGTTGTTTCTaGGATTGGTATGTACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCSLRCF*DWYVQE Trigger: TTCCTGTACATACCAATCGCAGAAACAACGTAAGGA...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTGCAGGAGTTCCAGATCCTaGTCGTTGAGAAAAATAAAA | + |
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Preference number: 2 (lower is better) Translates to: CCKNRNCCSCCCCCCCCCRSSRS*SLRKIK Trigger: TTTTATTTTTCTCAACGAGCAGGATCTGGAACTCCT...GCAGCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR TCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAAGCAATGCAAAATACTaGCATCTCGGGAAAACAGTA | + |
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Preference number: 2 (lower is better) Translates to: ENISPCFHVRITGLCFCVSNAKY*HLGKTV Trigger: TACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCT...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000029315.13 ENSMUST00000199674.5 ENSMUST00000200439.2 ENSMUST00000200441.5 |
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| 3UTR CAA 90 bp | AAGCAGTTAACTGCAAGTGTTAACTCTCTACACGATCCAAGAGTGTaGCTACACTCAATTACAATTAAGGATGCAGTATATCACCTAGAA | + |
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Preference number: 2 (lower is better) Translates to: KQLTASVNSLHDPRV*LHSITIKDAVYHLE Trigger: TTCTAGGTGATATACTGCATCCTTAATTGTAATTGAGTGTAGCAACACTCTTGGATCGTGTAGAGAGTTAACACTTGCAGTTAACTGCTT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR TCA 72 bp | CACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTaGTGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGC | + |
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Preference number: 3 (lower is better) Translates to: HGTGQCVCYETS*WQKAAAQAFSC Trigger: GCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR CCA 72 bp | ATGGGATACCTGCTTGAGGAGCCGCCTGCACGGCACTaGGCAGTGTGTTTGCTACGAGACCTCCTGATGGCA | + |
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Preference number: 3 (lower is better) Translates to: MGYLLEEPPARH*AVCLLRDLLMA Trigger: TGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR GCA 72 bp | TGTTTGCTACGAGACCTCCTGATGGCAGAAGGCCGCTaGACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: CLLRDLLMAEGR*TGFFLQEVWPQ Trigger: CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR TCA 72 bp | TTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTaGCGATGTAGCTGGGCTGTTTGTGCGGCTGCTGCT | + |
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Preference number: 3 (lower is better) Translates to: FILLFDWLPVCR*RCSWAVCAAAA Trigger: AGCAGCAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| 3UTR-3UTR CAA 90 bp | TGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTGCCTGCTCCTCTGGCTGTaGGGAACCGGAAGCTGCAGG | + |
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Preference number: 3 (lower is better) Translates to: CCKNRNCCSCCCCCCCCCLLLWL*GTGSCR Trigger: CCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCAG...GCAGCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
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| 3UTR-3UTR CAA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGTCCAGATCCTGCTCGTaGAGAAAAATAAAAATTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LEEPPARHWAVCLLRDLLSRSCS*RKIKIA Trigger: AGCAATTTTTATTTTTCTCAACGAGCAGGATCTGGA...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR TCA 72 bp | CCTCCTACTCCAGTAAGGTTAATAACGGCAGCTTGCTaGGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPTPVRLITAAC*AVKACSCAVNP Trigger: AGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCGTTATTAACCTTACTGGAGTAGGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR GCA 72 bp | TACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTaGCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTG | + |
|
Preference number: 3 (lower is better) Translates to: YHGRKRNGCHRH*LAQSPLLLSKL Trigger: CAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR GCA 72 bp | GCTGTTTGTGCGGCTGCTGCTGCCATAGCCATTTGGTaGTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: AVCAAAAAIAIW*CKNRNCCSCCC Trigger: ACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAAACAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGTTTGAGCCACTCTTCAGAGCCTGGGCTCCACCAGCAGAGCTCAGTACACCACGATCCAAGAGTGTaGCTACACTCAATTACAATT | + |
|
Preference number: 3 (lower is better) Translates to: WSLSHSSEPGLHQQSSVHHDPRV*LHSITI Trigger: AATTGTAATTGAGTGTAGCAACACTCTTGGATCGTG...GTGTACTGAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGGCTCAAACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR CCA 72 bp | GCCTGTTCCTGCGCAGTTAACCCTTGTTCAGAACCCTaGAGTAGATTTAAAGGTCTGAGACTTGAAGTATTT | + |
|
Preference number: 3 (lower is better) Translates to: ACSCAVNPCSEP*SRFKGLRLEVF Trigger: AAATACTTCAAGTCTCAGACCTTTAAATCTACTCCAGGGTTCTGAACAAGGGTTAACTGCGCAGGAACAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199674.5 |
||
| 3UTR GCA 72 bp | ATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTaGTTCTGTGTAAAGTGTGCACACACAGCAATGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ISPCFHVRITGL*FCVKCAHTAMQ Trigger: TTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 ENSMUST00000200441.5 |
||
| 3UTR GCA 72 bp | CTGCAAGTGTTAACTCTCTACACGATCCAAGAGTGTTaGTACACTCAATTACAATTAAGGATGCAGTATATC | + |
|
Preference number: 3 (lower is better) Translates to: LQVLTLYTIQEC*YTQLQLRMQYI Trigger: GATATACTGCATCCTTAATTGTAATTGAGTGTAGCAACACTCTTGGATCGTGTAGAGAGTTAACACTTGCAG 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| 3UTR TCA 72 bp | CTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTaGCATCTCGGGAAAACAGTAGAAATACAATTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LCKVCTHSNAKY*HLGKTVEIQFI Trigger: AATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCACACTTTACACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 ENSMUST00000200441.5 |
||
| 3UTR CAA 72 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTaGCTACGAGACCTCCTGATGGCAGAAGGCCGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LEEPPARHWAVC*LRDLLMAEGRC Trigger: GCAGCGGCCTTCTGCCATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGCCTCCTCCCCTGGACTaGGAGCGGCTGAACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLPPPLD*ERLNHY Trigger: GTAGTGGTTCAGCCGCTCTCAGTCCAGGGGAGGAGG...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGTTCATGTCTCTGGGATaGGCTGGCAGGGGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQFMSLG*AGRGQG Trigger: GCCCTGTCCCCTGCCAGCTCATCCCAGAGACATGAA...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGTTAGGAGGTCTCTGCTaGGCACTTTCCACGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LEEPPARHWAVCLLRDLLLGGLC*ALSTMY Trigger: GTACATCGTGGAAAGTGCTCAGCAGAGACCTCCTAA...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGTTCATGTCTCTGGGATaGGCTGGCAGGGGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQFMSLG*AGRGQG Trigger: GCCCTGTCCCCTGCCAGCTCATCCCAGAGACATGAA...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAAGCCTGAGGGAAGTTTaGTGGGTGGGGGTCGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQSLREV*WVGVGV Trigger: AACACCGACCCCCACCCATCAAACTTCCCTCAGGCT...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGTCATCAGCAGAGGAGTaGGATGGAGACATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLSSAEE*DGDIWL Trigger: CAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGA...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGTCGTCTTTTACATCATaGGCTGGCCACATTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQSSFTS*AGHIVG Trigger: GCCAACAATGTGGCCAGCTCATGATGTAAAAGACGA...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGTCCCTTTCCCAAAACTaGAGACTGAATGGACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLSLSQN*RLNGRG Trigger: ACCTCGTCCATTCAGTCTTCAGTTTTGGGAAAGGGA...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAGGTTCAGGGAGGACCTaGAGTACCTCTTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQGSGRT*STSSNT Trigger: GGTGTTGGAAGAGGTACTCCAGGTCCTCCCTGAACC...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAAGCAGAGGAGTGGGATaGAGACATTTGGCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEEPPARHWAVCLLRSRGVG*RHLAVI Trigger: AATGACAGCCAAATGTCTCCATCCCACTCCTCTGCT...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGACAAACCAGTTTGAATaGTCATCAGCAGAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEEPPARHWAVCLLRDLLTNQFE*SSAEEW Trigger: CCACTCCTCTGCTGATGACCATTCAAACTGGTTTGT...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAAAACTGAAGACTGAATaGACGAGGTCTCCGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEEPPARHWAVCLLRKLKTE*TRSPLL Trigger: CAGAAGCGGAGACCTCGTCCATTCAGTCTTCAGTTT...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199674.5 |
||
| 3UTR CAA 72 bp | CTGTTGGGAACCGGAAGCTGCAGGCTGCTGAGGTTGTaGTATAAAGTGAGGGAGCTGCGTCTGCTGCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLGTGSCRLLRL*YKVRELRLLLL Trigger: CAACAGCAGCAGACGCAGCTCCCTCACTTTATACAACAACCTCAGCAGCCTGCAGCTTCCGGTTCCCAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GGATACCTGCTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGATTCCACGATGTACTCTaGGCAATCCAAAGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GYLLEEPPARHWAVCLLRFHDVL*AIQSLF Trigger: GAACAAGCTTTGGATTGCGCAGAGTACATCGTGGAA...TCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAGCAGGTATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGGTAGCTAGAATCAGCTaGCTCTCAAGCAAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEEPPARHWAVCLLRDLLVARIS*LSSKSL Trigger: CAAACTTTTGCTTGAGAGCCAGCTGATTCTAGCTAC...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGTGGCCTGCTGTGCTGTaGAATAGTTACCTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQWPAVL*NSYLRN Trigger: GTTCCTCAGGTAACTATTTCACAGCACAGCAGGCCA...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGCATAAGGCAATCGGATaGTCTCAGAATCTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLHKAIG*SQNLIH Trigger: ATGGATCAGATTCTGAGACCATCCGATTGCCTTATG...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGGTAGCTAGAATCAGCTaGCTCTCAAGCAAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLVARIS*LSSKSL Trigger: CAAACTTTTGCTTGAGAGCCAGCTGATTCTAGCTAC...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTTGAGCCACTCTTCAGAGCCTGGGCTCCACCAGCAGAGCTCAGTACACCTGCTTTGGAAATTTTaGGGTCATAATGCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSLSHSSEPGLHQQSSVHLLWKF*GHNAGL Trigger: CAGGCCAGCATTATGACCTCAAAATTTCCAAAGCAG...GTGTACTGAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGGCTCAAACTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCCTCCTCCCCTGGACTaGGAGCGGCTGAACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTPPPLD*ERLNHY Trigger: GTAGTGGTTCAGCCGCTCTCAGTCCAGGGGAGGAGG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGGTCTACACAATTTCCTaGTTTGGAAATTTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEEPPARHWAVCLLRDLLVYTIS*FGNFEV Trigger: GACCTCAAAATTTCCAAAGCAGGAAATTGTGTAGAC...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAGGATCCCCAAGAGACTaGAAGATGGTCAGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQGSPRD*KMVSFV Trigger: AACAAAGCTGACCATCTTGCAGTCTCTTGGGGATCC...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTCGAGGTCTCCGCTTCTaGCTCCTCCCCTGGACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGIRGLRF*LLPWTE Trigger: CTCAGTCCAGGGGAGGAGGCAGAAGCGGAGACCTCG...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199674.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAACCAACACCGTTTCATTaGGCGAGTGTTCATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQPTPFH*ASVHLL Trigger: CAGAAGATGAACACTCGCCCAATGAAACGGTGTTGG...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAGCTTGGCTTACACGATaGAGGAGGAGTTGGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQAWLTR*RRSWRF Trigger: AAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGC...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TGGAGTTTGAGCCACTCTTCAGAGCCTGGGCTCCACCAGCAGAGCTCAGTACACTTCCTGGGTACAGATTaGCTACTAAACACGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLSHSSEPGLHQQSSVHFLGTD*LLNTTK Trigger: CTTTGTCGTGTTTAGTAGTCAATCTGTACCCAGGAA...GTGTACTGAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGGCTCAAACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCAGCCTGAGGGAAGTTTaGTGGGTGGGGGTCGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCSLREV*WVGVGV Trigger: AACACCGACCCCCACCCATCAAACTTCCCTCAGGCT...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAATTCCACGATGTACTCTaGGCAATCCAAAGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQFHDVL*AIQSLF Trigger: GAACAAGCTTTGGATTGCGCAGAGTACATCGTGGAA...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGGTCTACACAATTTCCTaGTTTGGAAATTTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLVYTIS*FGNFEV Trigger: GACCTCAAAATTTCCAAAGCAGGAAATTGTGTAGAC...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCGGCTGAACCACTACTaGTGTGTGACATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: VTMVERGMVVTGIAWLRARLNHY*CVTSSL Trigger: CAGTGAAGATGTCACACAGCAGTAGTGGTTCAGCCG...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCCACTCTTCAGAGCCTaGGCTCCACCAGCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTPLFRA*APPAEL Trigger: GAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTGCTCCTCTGGCTGTTaGGAACCGGAAGCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTCSSGC*EPEAAG Trigger: GCCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGACAAACCAGTTTGAATaGTCATCAGCAGAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQTNQFE*SSAEEW Trigger: CCACTCCTCTGCTGATGACCATTCAAACTGGTTTGT...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACACAGCAGAGTCTGCCATaGCCGGGGAGAGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTQQSLP*PGRASF Trigger: GAAGCTCGCTCTCCCCGGTCATGGCAGACTCTGCTG...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGCCACATTGTTGGCTGTaGGTCGTCAGATTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GRYHGRKRNGCHRHCLAQPHCWL*VVRFDG Trigger: TCCATCAAATCTGACGACTCACAGCCAACAATGTGG...CTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTACCTCCTCCCCTGGACTaGGAGCGGCTGAACCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVPPPLD*ERLNHY Trigger: GTAGTGGTTCAGCCGCTCTCAGTCCAGGGGAGGAGG...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTTCCTGCAGGAGGTATaGCCCCAGTGTCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTFLQEV*PQCHSP Trigger: TGGGCTGTGACACTGGGGCCATACCTCCTGCAGGAA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGCTCCTCTGGCTGTTaGGAACCGGAAGCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLCSSGC*EPEAAG Trigger: GCCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCA...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTACGGCTGCCTGTGACTaGGGAAAGCCTCCTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTTAACD*GKPPTP Trigger: TGGAGTAGGAGGCTTTCCCCAGTCACAGGCAGCCGT...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTAAGCAGAGGAGTGGGATaGAGACATTTGGCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: LSQALPGSEPFAAEQTELSRGVG*RHLAVI Trigger: AATGACAGCCAAATGTCTCCATCCCACTCCTCTGCT...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCAAACTGAAGACTGAATaGACGAGGTCTCCGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMVERGMVVTGIAWLRAKLKTE*TRSPPV Trigger: AACAGGCGGAGACCTCGTCCATTCAGTCTTCAGTTT...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTAGCTTGGCTTACACGATaGAGGAGGAGTTGGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQALPGSEPFAAEQTELAWLTR*RRSWRF Trigger: AAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGC...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATTCTCTGGGATGAGCTaGCAGGGGACAGGGCGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTFSGMS*QGTGRQ Trigger: CTGCCGCCCTGTCCCCTGCCAGCTCATCCCAGAGAA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000197502.5 |
||
| CDS-3UTR TCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTCAGAGCTCAGTACACTaGCGGAGGTTAGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QENISPCFHVRITGLCFCQSSVH*RRLAQQ Trigger: CTGCTGGGCTAACCTCCGTCAGTGTACTGAGCTCTG...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACACAACACGGCTGCCTGTaGCTGGGGAAAGCCTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTQHGCL*LGKASY Trigger: GTAGGAGGCTTTCCCCAGTCACAGGCAGCCGTGTTG...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCATCCATTTTTCCCCCTaGGCATCAGAGAATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTMVERGMVVTGIAWLRAIHFSP*ASENSL Trigger: AAGGCTATTCTCTGATGCTCAGGGGGAAAAATGGAT...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGCACAGGCTTTTTCCTaGAGGAGGTATGGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTAQAFS*RRYGPS Trigger: ACTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTTGGGAACCGGAAGCTaGAGGCTGCTGAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTLGTGS*RLLRLL Trigger: CAACAACCTCAGCAGCCTGCAGCTTCCGGTTCCCAA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTTGTGCGGCTGCTGCTaGCATAGCCATTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTLCGCC*HSHLVL Trigger: CAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACACCACTCTTCAGAGCCTaGGCTCCACCAGCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTPLFRA*APPAEL Trigger: GAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGG...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAATCCTGGGTCCACTTATaGTTGTCACTTGTTATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQSWVHL*LSLVIE Trigger: TTCTATAACAAGTGACAACCATAAGTGGACCCAGGA...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAAAAAGTTTGTCTTCCTaGGTCCACTTATGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQKSLSS*VHLWLS Trigger: TGACAACCATAAGTGGACCCAGGAAGACAAACTTTT...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTATAACGGCAGCTTGCTaGGCAGTTAAGGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTITAAC*AVKACS Trigger: GGAACAGGCCTTAACTGCTCAGCAAGCTGCCGTTAT...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGAGCTGGAGTCTCTGCTaGGGAAGGCTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLSWSLC*GRLCSG Trigger: ACCTGAGCAAAGCCTTCCTCAGCAGAGACTCCAGCT...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTTAGGAGGTCTCTGCTaGGCACTTTCCACGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCLGGLC*ALSTMY Trigger: GTACATCGTGGAAAGTGCTCAGCAGAGACCTCCTAA...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCTTCCTGGGTACAGATTaGCTACTAAACACGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTMVERGMVVTGIAWLRAFLGTD*LLNTTK Trigger: CTTTGTCGTGTTTAGTAGTCAATCTGTACCCAGGAA...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTACAGTCTTTGACCCAATaGCAAACCAGTTTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSQALPGSEPFAAEQTELQSLTQ*QTSLNG Trigger: ACCATTCAAACTGGTTTGTCATTGGGTCAAAGACTG...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAAGCCTGAGGGAAGTTTaGTGGGTGGGGGTCGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTSLREV*WVGVGV Trigger: AACACCGACCCCCACCCATCAAACTTCCCTCAGGCT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCGAGCTTCTCTGGGATaGGCTGGCAGGGGACAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFRASLG*AGRGQG Trigger: GCCCTGTCCCCTGCCAGCTCATCCCAGAGAAGCTCG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197502.5 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTTTGTGCGGCTGCTGCTaGCATAGCCATTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QENISPCFHVRITGLCFCLCGCC*HSHLVL Trigger: CAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAA...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAGTCATTTTCTTCATCTaGTTTCCACGGCTGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: EEWLSQALPGSEPFAAEQVIFFI*FPRLYF Trigger: AAAATACAGCCGTGGAAAGCAGATGAAGAAAATGAC...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAACGGCTGCCTGTGACTaGGGAAAGCCTCCTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVTAACD*GKPPTP Trigger: TGGAGTAGGAGGCTTTCCCCAGTCACAGGCAGCCGT...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAACGGCTGCCTGTGACTaGGGAAAGCCTCCTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTTAACD*GKPPTP Trigger: TGGAGTAGGAGGCTTTCCCCAGTCACAGGCAGCCGT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCAGCAGAGTCTGCCATaGCCGGGGAGAGCGAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMQQSLP*PGRASF Trigger: GAAGCTCGCTCTCCCCGGTCATGGCAGACTCTGCTG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCTTCATTTTACTCTTTaGCTGGCTGCCTGTGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTLHFTL*LAACVP Trigger: CGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAATGGCAGAAGGCCGCTaGACAGGCTTTTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTMAEGR*TGFFLQ Trigger: CTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCAT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTATTGTGCGGCTGCTGCTaGCATAGCCATTTGGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVLCGCC*HSHLVL Trigger: CAGCACCAAATGGCTATGGCAGCAGCAGCCGCACAA...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTCGGCTGAACCACTACTaGTGTGTGACATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGIRLNHY*CVTSSL Trigger: CAGTGAAGATGTCACACAGCAGTAGTGGTTCAGCCG...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATGCTCCTCTGGCTGTTaGGAACCGGAAGCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVCSSGC*EPEAAG Trigger: GCCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGCTGCCATAGCCATTTaGTGCTGCAAGAATCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTAAIAI*CCKNRN Trigger: GTTGCGATTCTTGCAGCACCAAATGGCTATGGCAGC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGTCACTTGTTATAGAATaGACATCACAGACTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQSLVIE*TSQTKV Trigger: GACTTTAGTCTGTGATGTCCATTCTATAACAAGTGA...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | TGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTGCCCAACACCGTTTCATTaGGCGAGTGTTCATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CCKNRNCCSCCCCCCCCCPTPFH*ASVHLL Trigger: CAGAAGATGAACACTCGCCCAATGAAACGGTGTTGG...GCAGCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGGTTCAGGGAGGACCTaGAGTACCTCTTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVGSGRT*STSSNT Trigger: GGTGTTGGAAGAGGTACTCCAGGTCCTCCCTGAACC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTTCATCAGCAGAGGAGTaGGATGGAGACATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGISSAEE*DGDIWL Trigger: CAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGA...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGGGGAAGTTTGATGGGTaGGGGTCGGTGTTTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLGKFDG*GSVFYS Trigger: GGAGTAAAACACCGACCCCCACCCATCAAACTTCCC...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGCCCAGCATGGAGTTTaGGCCACTCTTCAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVAQHGV*ATLQSL Trigger: CAGGCTCTGAAGAGTGGCTCAAACTCCATGCTGGGC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGGTTGTTGTATAAAGTaGGGGAGCTGCGTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVGCCIK*GSCVCC Trigger: GCAGCAGACGCAGCTCCCTCACTTTATACAACAACC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCAACACGGCTGCCTGTaGCTGGGGAAAGCCTCCTAC | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMQHGCL*LGKASY Trigger: GTAGGAGGCTTTCCCCAGTCACAGGCAGCCGTGTTG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGATGGTCTCAGAATCTaGTCCATTTTTCCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTDGLRI*SIFPPE Trigger: CTCAGGGGGAAAAATGGATCAGATTCTGAGACCATC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGATGGTCTCAGAATCTaGTCCATTTTTCCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGIDGLRI*SIFPPE Trigger: CTCAGGGGGAAAAATGGATCAGATTCTGAGACCATC...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCCTGCTTTGGAAATTTTaGGGTCATAATGCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCLLWKF*GHNAGL Trigger: CAGGCCAGCATTATGACCTCAAAATTTCCAAAGCAG...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTCGTCTTTTACATCATaGGCTGGCCACATTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTSSFTS*AGHIVG Trigger: GCCAACAATGTGGCCAGCTCATGATGTAAAAGACGA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTCCCTTTCCCAAAACTaGAGACTGAATGGACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTSLSQN*RLNGRG Trigger: ACCTCGTCCATTCAGTCTTCAGTTTTGGGAAAGGGA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGGTGTTAAAAATGAGTaGACCACCAGGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTGVKNE*TTRKLE Trigger: CTCCAGCTTCCTGGTGGTTCACTCATTTTTAACACC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTAATAGTCACGTATTTCTaGTATCACACATCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LSQALPGSEPFAAEQTELIVTYF*YHTSTM Trigger: CATTGTGGATGTGTGATAGCAGAAATACGTGACTAT...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGGGAGCTGCGTCTGCTaGTGTTGCTGCTGGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVGSCVC*CCCWVL Trigger: TAACACCCAGCAGCAACAGCAGCAGACGCAGCTCCC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCCACTCTTCAGAGCCTaGGCTCCACCAGCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMPLFRA*APPAEL Trigger: GAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATTCCTGCAGGAGGTATaGCCCCAGTGTCACAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVFLQEV*PQCHSP Trigger: TGGGCTGTGACACTGGGGCCATACCTCCTGCAGGAA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | TGGTGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTCTTCACTGGGCATTTaGCTTCATTCTGGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: WCCKNRNCCSCCCCCCCCSSLGI*LHSGPT Trigger: AGTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGA...GCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCAGAGCTCAGTACACTaGCGGAGGTTAGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFQSSVH*RRLAQQ Trigger: CTGCTGGGCTAACCTCCGTCAGTGTACTGAGCTCTG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCAGAGCTCAGTACACTaGCGGAGGTTAGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMQSSVH*RRLAQQ Trigger: CTGCTGGGCTAACCTCCGTCAGTGTACTGAGCTCTG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGCCCAGCATGGAGTTTaGGCCACTCTTCAGAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFAQHGV*ATLQSL Trigger: CAGGCTCTGAAGAGTGGCTCAAACTCCATGCTGGGC...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAAGCTGGAGTCTCTGCTaGGGAAGGCTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVSWSLC*GRLCSG Trigger: ACCTGAGCAAAGCCTTCCTCAGCAGAGACTCCAGCT...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTACTTCATTTTACTCTTTaGCTGGCTGCCTGTGTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVLHFTL*LAACVP Trigger: CGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAG...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTATCCATTTTTCCCCCTaGGCATCAGAGAATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTIHFSP*ASENSL Trigger: AAGGCTATTCTCTGATGCTCAGGGGGAAAAATGGAT...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGGATGGTCTCAGAATCTaGTCCATTTTTCCCCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLDGLRI*SIFPPE Trigger: CTCAGGGGGAAAAATGGATCAGATTCTGAGACCATC...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTCGTCTTTTACATCATaGGCTGGCCACATTGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLSSFTS*AGHIVG Trigger: GCCAACAATGTGGCCAGCTCATGATGTAAAAGACGA...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATGGCCTGCTGTGCTGTaGAATAGTTACCTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTWPAVL*NSYLRN Trigger: GTTCCTCAGGTAACTATTTCACAGCACAGCAGGCCA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGCACAGGCTTTTTCCTaGAGGAGGTATGGCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVAQAFS*RRYGPS Trigger: ACTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAATGGCAGAAGGCCGCTaGACAGGCTTTTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVMAEGR*TGFFLQ Trigger: CTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCAT...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATTGGGAACCGGAAGCTaGAGGCTGCTGAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVLGTGS*RLLRLL Trigger: CAACAACCTCAGCAGCCTGCAGCTTCCGGTTCCCAA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTTAAGGCCTGTTCCTaGGCAGTTAACCCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QENISPCFHVRITGLCFCVKACS*AVNPCS Trigger: TGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAAC...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGTCTGCTGCTGTTGCTaGTGGGTGTTAAAAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTVCCCC*WVLKMS Trigger: ACTCATTTTTAACACCCAGCAGCAACAGCAGCAGAC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGGGGAGCTGCGTCTGCTaGTGTTGCTGCTGGGTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMGSCVC*CCCWVL Trigger: TAACACCCAGCAGCAACAGCAGCAGACGCAGCTCCC...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGCTGCCATAGCCATTTaGTGCTGCAAGAATCGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTAAIAI*CCKNRN Trigger: GTTGCGATTCTTGCAGCACCAAATGGCTATGGCAGC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGGTTCAGGGAGGACCTaGAGTACCTCTTCCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVGSGRT*STSSNT Trigger: GGTGTTGGAAGAGGTACTCCAGGTCCTCCCTGAACC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATCATCAGCAGAGGAGTaGGATGGAGACATTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTSSAEE*DGDIWL Trigger: CAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTTCTTCACTGGGCATTTaGCTTCATTCTGGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGISSLGI*LHSGPT Trigger: AGTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGA...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTAGCTGGAGTCTCTGCTaGGGAAGGCTTTGCTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFSWSLC*GRLCSG Trigger: ACCTGAGCAAAGCCTTCCTCAGCAGAGACTCCAGCT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTCAGTCTTTGACCCAATaGCAAACCAGTTTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGIQSLTQ*QTSLNG Trigger: ACCATTCAAACTGGTTTGTCATTGGGTCAAAGACTG...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTATGGCAGAAGGCCGCTaGACAGGCTTTTTCCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFMAEGR*TGFFLQ Trigger: CTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCAT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGCCATAGCCATTTGGTaGTGCAAGAATCGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVAIAIW*CKNRNC Trigger: ACAGTTGCGATTCTTGCAGCACCAAATGGCTATGGC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGGATCCCCAAGAGACTaGAAGATGGTCAGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTGSPRD*KMVSFV Trigger: AACAAAGCTGACCATCTTGCAGTCTCTTGGGGATCC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTCTGCTGCTGTTGCTaGAGTAGATTTAAAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QENISPCFHVRITGLCFCVCCCC*SRFKGL Trigger: CAGACCTTTAAATCTACTCCAGCAACAGCAGCAGAC...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029315.13 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCATAAGGCAATCGGATaGTCTCAGAATCTGATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTHKAIG*SQNLIH Trigger: ATGGATCAGATTCTGAGACCATCCGATTGCCTTATG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGGGAAGTTTGATGGGTaGGGGTCGGTGTTTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVGKFDG*GSVFYS Trigger: GGAGTAAAACACCGACCCCCACCCATCAAACTTCCC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTGCTGCTGTTGCTGCTaGGTGTTAAAAATGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTCCCCC*VLKMSE Trigger: TTCACTCATTTTTAACACCCAGCAGCAACAGCAGCA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGGTTGTTGTATAAAGTaGGGGAGCTGCGTCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFGCCIK*GSCVCC Trigger: GCAGCAGACGCAGCTCCCTCACTTTATACAACAACC...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGATAACGGCAGCTTGCTaGGCAGTTAAGGCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMITAAC*AVKACS Trigger: GGAACAGGCCTTAACTGCTCAGCAAGCTGCCGTTAT...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAATCCATTTTTCCCCCTaGGCATCAGAGAATAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTIHFSP*ASENSL Trigger: AAGGCTATTCTCTGATGCTCAGGGGGAAAAATGGAT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGTCTGCTGCTGTTGCTaGTGGGTGTTAAAAATGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTVCCCC*WVLKMS Trigger: ACTCATTTTTAACACCCAGCAGCAACAGCAGCAGAC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | CCTGTTGTTATGGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTCAAGAGACTGCAAGATaGTCAGCTTTGTTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVVMDVTMVERGMVVTGIQETAR*SALFSD Trigger: ATCAGAAAACAAAGCTGACCATCTTGCAGTCTCTTG...AATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCCATAACAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAACAAACCAGTTTGAATaGTCATCAGCAGAGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTTNQFE*SSAEEW Trigger: CCACTCCTCTGCTGATGACCATTCAAACTGGTTTGT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATCTTCACTGGGCATTTaGCTTCATTCTGGACCAACT | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTSSLGI*LHSGPT Trigger: AGTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTTAGGAGGTCTCTGCTaGGCACTTTCCACGATGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFLGGLC*ALSTMY Trigger: GTACATCGTGGAAAGTGCTCAGCAGAGACCTCCTAA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATTCCTGGGTACAGATTaGCTACTAAACACGACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTFLGTD*LLNTTK Trigger: CTTTGTCGTGTTTAGTAGTCAATCTGTACCCAGGAA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTGTTAACTCTCTACACGATCCAAGAGTGTTGCTACACTCAATTACAATTACCACATTGTTGGCTGTaGGTCGTCAGATTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QVLTLYTIQECCYTQLQLPHCWL*VVRFDG Trigger: TCCATCAAATCTGACGACTCACAGCCAACAATGTGG...TAATTGTAATTGAGTGTAGCAACACTCTTGGATCGTGTAGAGAGTTAACACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTGGCCTGCTGTGCTGTaGAATAGTTACCTGAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFWPAVL*NSYLRN Trigger: GTTCCTCAGGTAACTATTTCACAGCACAGCAGGCCA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGGTGTTAAAAATGAGTaGACCACCAGGAAGCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVGVKNE*TTRKLE Trigger: CTCCAGCTTCCTGGTGGTTCACTCATTTTTAACACC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGTTAAGGCCTGTTCCTaGGCAGTTAACCCTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVVKACS*AVNPCS Trigger: TGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAAC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGTCTACACAATTTCCTaGTTTGGAAATTTTGAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTVYTIS*FGNFEV Trigger: GACCTCAAAATTTCCAAAGCAGGAAATTGTGTAGAC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGGATCCCCAAGAGACTaGAAGATGGTCAGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVGSPRD*KMVSFV Trigger: AACAAAGCTGACCATCTTGCAGTCTCTTGGGGATCC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCGGCTGAACCACTACTaGTGTGTGACATCTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFRLNHY*CVTSSL Trigger: CAGTGAAGATGTCACACAGCAGTAGTGGTTCAGCCG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATGCGTCTGCTGCTGTTaGTGCTGGGTGTTAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVCVCCC*CWVLKM Trigger: CATTTTTAACACCCAGCAGCAACAGCAGCAGACGCA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGAATTTTGGAGTAGTTaGCATGCCTCTCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTEFWSS*HASLHF Trigger: AAAATGAAGAGAGGCATGCCAACTACTCCAAAATTC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGTAGCTAGAATCAGCTaGCTCTCAAGCAAAAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTVARIS*LSSKSL Trigger: CAAACTTTTGCTTGAGAGCCAGCTGATTCTAGCTAC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTACCAACACCGTTTCATTaGGCGAGTGTTCATCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVPTPFH*ASVHLL Trigger: CAGAAGATGAACACTCGCCCAATGAAACGGTGTTGG...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGCAAGAGACTGCAAGATaGTCAGCTTTGTTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLQETAR*SALFSD Trigger: ATCAGAAAACAAAGCTGACCATCTTGCAGTCTCTTG...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGCTTGGCTTACACGATaGAGGAGGAGTTGGAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVAWLTR*RRSWRF Trigger: AAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTACTGCTTTGGAAATTTTaGGGTCATAATGCTGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVLLWKF*GHNAGL Trigger: CAGGCCAGCATTATGACCTCAAAATTTCCAAAGCAG...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCCACATTGTTGGCTGTaGGTCGTCAGATTTGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFPHCWL*VVRFDG Trigger: TCCATCAAATCTGACGACTCACAGCCAACAATGTGG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGTCCCTTTCCCAAAACTaGAGACTGAATGGACGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMSLSQN*RLNGRG Trigger: ACCTCGTCCATTCAGTCTTCAGTTTTGGGAAAGGGA...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGCCATAGCCATTTGGTaGTGCAAGAATCGCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFAIAIW*CKNRNC Trigger: ACAGTTGCGATTCTTGCAGCACCAAATGGCTATGGC...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR GCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATTCCACGATGTACTCTaGGCAATCCAAAGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVFHDVL*AIQSLF Trigger: GAACAAGCTTTGGATTGCGCAGAGTACATCGTGGAA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGAATTTTGGAGTAGTTaGCATGCCTCTCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QENISPCFHVRITGLCFCEFWSS*HASLHF Trigger: AAAATGAAGAGAGGCATGCCAACTACTCCAAAATTC...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAAAAAGTTTGTCTTCCTaGGTCCACTTATGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTKSLSS*VHLWLS Trigger: TGACAACCATAAGTGGACCCAGGAAGACAAACTTTT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAAAAAGTTTGTCTTCCTaGGTCCACTTATGGTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVKSLSS*VHLWLS Trigger: TGACAACCATAAGTGGACCCAGGAAGACAAACTTTT...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTAGCAGAGGAGTGGGATaGAGACATTTGGCTGTCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFSRGVG*RHLAVI Trigger: AATGACAGCCAAATGTCTCCATCCCACTCCTCTGCT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTAAACTGAAGACTGAATaGACGAGGTCTCCGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFKLKTE*TRSPPV Trigger: AACAGGCGGAGACCTCGTCCATTCAGTCTTCAGTTT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200439.2 |
||
| CDS-3UTR TCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTACAGTCTTTGACCCAATaGCAAACCAGTTTGAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVQSLTQ*QTSLNG Trigger: ACCATTCAAACTGGTTTGTCATTGGGTCAAAGACTG...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGTGCGTCTGCTGCTGTTaGTGGAGTAGATTTAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHSLKDISSPYVVSAIGMCVCCC*WSRFKG Trigger: ACCTTTAAATCTACTCCAGCAACAGCAGCAGACGCA...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029315.13 |
||
| CDS-3UTR GCA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAATAGTCACGTATTTCTaGTATCACACATCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: VHTQQCKILTSRENSRNTIVTYF*YHTSTM Trigger: CATTGTGGATGTGTGATAGCAGAAATACGTGACTAT...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGTCATTTTCTTCATCTaGTTTCCACGGCTGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ENISPCFHVRITGLCFCVVIFFI*FPRLYF Trigger: AAAATACAGCCGTGGAAAGCAGATGAAGAAAATGAC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTGTTAACTCTCTACACGATCCAAGAGTGTTGCTACACTCAATTACAATTATCCTGGGTCCACTTATaGTTGTCACTTGTTATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QVLTLYTIQECCYTQLQLSWVHL*LSLVIE Trigger: TTCTATAACAAGTGACAACCATAAGTGGACCCAGGA...TAATTGTAATTGAGTGTAGCAACACTCTTGGATCGTGTAGAGAGTTAACACTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTGCTGCTGTTGCTGCTaGGTGTTAAAAATGAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFCCCCC*VLKMSE Trigger: TTCACTCATTTTTAACACCCAGCAGCAACAGCAGCA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| 3UTR CAA 72 bp | ACTGCAAGTGTTAACTCTCTACACGATCCAAGAGTGTaGCTACACTCAATTACAATTAAGGATGCAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: TASVNSLHDPRV*LHSITIKDAVY Trigger: ATATACTGCATCCTTAATTGTAATTGAGTGTAGCAACACTCTTGGATCGTGTAGAGAGTTAACACTTGCAGT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGAATTTTGGAGTAGTTaGCATGCCTCTCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRENSRNTIHSMVVFVEFWSS*HASLHF Trigger: AAAATGAAGAGAGGCATGCCAACTACTCCAAAATTC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTCCTGGGTCCACTTATaGTTGTCACTTGTTATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFSWVHL*LSLVIE Trigger: TTCTATAACAAGTGACAACCATAAGTGGACCCAGGA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCAAGAGACTGCAAGATaGTCAGCTTTGTTTTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFQETAR*SALFSD Trigger: ATCAGAAAACAAAGCTGACCATCTTGCAGTCTCTTG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTATAGTCACGTATTTCTaGTATCACACATCCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFIVTYF*YHTSTM Trigger: CATTGTGGATGTGTGATAGCAGAAATACGTGACTAT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR GCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTCATTTTCTTCATCTaGTTTCCACGGCTGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFVIFFI*FPRLYF Trigger: AAAATACAGCCGTGGAAAGCAGATGAAGAAAATGAC...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CCA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTCACTTGTTATAGAATaGACATCACAGACTAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ILTSRENSRNTIHSMVVFSLVIE*TSQTKV Trigger: GACTTTAGTCTGTGATGTCCATTCTATAACAAGTGA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS CCA 90 bp | GTTAGCCCAGCAGAGTCTGCCATGACCGGGGAGAGCGAGCTTCTCTaGGATGAGCTGGCAGGGGACAGGGCGGCAGGAGAAAGCATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VSPAESAMTGESELL*DELAGDRAAGESML Trigger: TAGCATGCTTTCTCCTGCCGCCCTGTCCCCTGCCAGCTCATCCCAGAGAAGCTCGCTCTCCCCGGTCATGGCAGACTCTGCTGGGCTAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197502.5 |
||
| CDS-3UTR CAA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGGAGCCTGAGGGAAGTTaGATGGGTGGGGGTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQEPEGS*MGGGRC Trigger: ACACCGACCCCCACCCATCAAACTTCCCTCAGGCTC...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | CTTGAGGAGCCGCCTGCACGGCACTGGGCAGTGTGTTTGCTACGAGACCTCCTGATCTTCACTGGGCATTaGGCTTCATTCTGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEEPPARHWAVCLLRDLLIFTGH*ASFWTN Trigger: GTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGAT...CAGGAGGTCTCGTAGCAAACACACTGCCCAGTGCCGTGCAGGCGGCTCCTCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS TCA 90 bp | GATGAGCTGGCAGGGGACAGGGCGGCAGGAGAAAGCATGCTAACTTaGCTGAGGTCCACAGAAGACTTCCGAGAAAGGCTTGGCTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: DELAGDRAAGESMLT*LRSTEDFRERLGLH Trigger: GTGTAAGCCAAGCCTTTCTCGGAAGTCTTCTGTGGACCTCAGTCAAGTTAGCATGCTTTCTCCTGCCGCCCTGTCCCCTGCCAGCTCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | CTGATGGCAGAAGGCCGCTGCACAGGCTTTTTCCTGCAGGAGGTATGGCCCCAGTCCAACACCGTTTCATaGGGCGAGTGTTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LMAEGRCTGFFLQEVWPQSNTVS*GECSSS Trigger: AGAAGATGAACACTCGCCCAATGAAACGGTGTTGGA...CTGGGGCCATACCTCCTGCAGGAAAAAGCCTGTGCAGCGGCCTTCTGCCATCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAACATGAGCTGGCCACATaGTTGGCTGTGAGTCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: EEWLSQALPGSEPFAAEQHELAT*LAVSRQ Trigger: CTGACGACTCACAGCCAACAATGTGGCCAGCTCATG...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGGACCAACTCCTGGTATaGATTAACTACCCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLDQLLV*INYPLC Trigger: GCAGAGAGGGTAGTTAATCAATACCAGGAGTTGGTC...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTGGGCTGTTTGTGCGGCTGATCTTCACTGGGCATTaGGCTTCATTCTGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LTGCLCAGDDVAGLFVRLIFTGH*ASFWTN Trigger: GTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGAT...CAGCCGCACAAACAGCCCAGCTACATCGTCACCGGCACACAGGCAGCCAGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS CCA 90 bp | ACTGAGGTCCACAGAAGACTTCCGAGAAAGGCTTGGCTTACACGATaGAGGAGGAGTTGGAGATTTAAGGAAGCTGCTGGCCTGCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEVHRRLPRKAWLTR*RRSWRFKEAAGLLC Trigger: GCACAGCAGGCCAGCAGCTTCCTTAAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGTCTTCTGTGGACCTCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | GGACGTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGACTTCCGAGAAAGGCTaGGCTTACACGATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GRYHGRKRNGCHRHCLAQTSEKG*AYTMEE Trigger: CTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGT...CTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAACGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTCTGCTCCTCTGGCTGTaGGGAACCGGAAGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QENISPCFHVRITGLCFCLLLWL*GTGSCR Trigger: CCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCAG...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | GAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAATGCGCAATCCAAAGCTaGTTCTACAGCTTGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EEWLSQALPGSEPFAAEQCAIQS*FYSLLH Trigger: ATGCAACAAGCTGTAGAACAAGCTTTGGATTGCGCA...TTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | CGGCAGCTTGCTGAGCAGTTAAGGCCTGTTCCTGCGCAGTTAACCCTTGTTCAGTGGGTCCACTTATGGTaGTCACTTGTTATAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: RQLAEQLRPVPAQLTLVQWVHLW*SLVIEW Trigger: CCATTCTATAACAAGTGACAACCATAAGTGGACCCA...CTGAACAAGGGTTAACTGCGCAGGAACAGGCCTTAACTGCTCAGCAAGCTGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTATCCAACACCGTTTCATaGGGCGAGTGTTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSQALPGSEPFAAEQTELSNTVS*GECSSS Trigger: AGAAGATGAACACTCGCCCAATGAAACGGTGTTGGA...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TGGAGTTTGAGCCACTCTTCAGAGCCTGGGCTCCACCAGCAGAGCTCAGTACACGCAAGATGGTCAGCTTaGTTTTCTGATACTGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: WSLSHSSEPGLHQQSSVHARWSA*FSDTDY Trigger: GTAATCAGTATCAGAAAACAAAGCTGACCATCTTGC...GTGTACTGAGCTCTGCTGGTGGAGCCCAGGCTCTGAAGAGTGGCTCAAACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTAGACCAACTCCTGGTATaGATTAACTACCCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSQALPGSEPFAAEQTELDQLLV*INYPLC Trigger: GCAGAGAGGGTAGTTAATCAATACCAGGAGTTGGTC...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS CCA 90 bp | AGAAGACTTCCGAGAAAGGCTTGGCTTACACGATGGAGGAGGAGTTaGAGATTTAAGGAAGCTGCTGGCCTGCTGTGCTGTGAAATAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRLPRKAWLTRWRRS*RFKEAAGLLCCEIV Trigger: AACTATTTCACAGCACAGCAGGCCAGCAGCTTCCTTAAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGTCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TTGTCACAGGCATTGCCTGGCTCAGAGCCCTTTGCTGCTGAGCAAACTGAGTTACTCTCAAGCAAAAGTTaGTCTTCCTGGGTCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSQALPGSEPFAAEQTELLSSKS*SSWVHL Trigger: TAAGTGGACCCAGGAAGACAAACTTTTGCTTGAGAG...TAACTCAGTTTGCTCAGCAGCAAAGGGCTCTGAGCCAGGCAATGCCTGTGACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCATGAGCTGGCCACATaGTTGGCTGTGAGTCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTHELAT*LAVSRQ Trigger: CTGACGACTCACAGCCAACAATGTGGCCAGCTCATG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGAGCCTGAGGGAAGTTaGATGGGTGGGGGTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: ENISPCFHVRITGLCFCVEPEGS*MGGGRC Trigger: ACACCGACCCCCACCCATCAAACTTCCCTCAGGCTC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS CCA 90 bp | ACCCTCTCTGCGTCAGTCTTTGACCCAATGACAAACCAGTTTGAATaGTCATCAGCAGAGGAGTGGGATGGAGACATTTGGCTGTCATTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSASVFDPMTNQFE*SSAEEWDGDIWLSF Trigger: AAATGACAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGACCATTCAAACTGGTTTGTCATTGGGTCAAAGACTGACGCAGAGAGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGCACTGGGCAGTGTGTTaGCTACGAGACCTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLHWAVC*LRDLLM Trigger: CATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTG...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTACTGCTCCTCTGGCTGTaGGGAACCGGAAGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVLLLWL*GTGSCR Trigger: CCTGCAGCTTCCGGTTCCCAACAGCCAGAGGAGCAG...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGCTGCTGAGGAAGGCTTaGCTCAGGTCTGTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLLLRKA*LRSVLS Trigger: GCTGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAG...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | GTTACCATGGTAGAAAGAGGAATGGTTGTCACAGGCATTGCCTGGCTCAGAGCCTGGGTCCACTTATGGTaGTCACTTGTTATAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VTMVERGMVVTGIAWLRAWVHLW*SLVIEW Trigger: CCATTCTATAACAAGTGACAACCATAAGTGGACCCA...GGCTCTGAGCCAGGCAATGCCTGTGACAACCATTCCTCTTTCTACCATGGTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | CTCTCTTCATTTTACTCTTTGACTGGCTGCCTGTGTGCCGGTGACGATGTAGCTCTCTCAAGCAAAAGTTaGTCTTCCTGGGTCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: LSSFYSLTGCLCAGDDVALSSKS*SSWVHL Trigger: TAAGTGGACCCAGGAAGACAAACTTTTGCTTGAGAG...AGCTACATCGTCACCGGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTACTTCCGAGAAAGGCTaGGCTTACACGATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTTSEKG*AYTMEE Trigger: CTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGT...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACACACTGGGCAGTGTGTTaGCTACGAGACCTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTHWAVC*LRDLLM Trigger: CATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTG...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACACTGCTGAGGAAGGCTTaGCTCAGGTCTGTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTLLRKA*LRSVLS Trigger: GCTGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAG...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTTGCTGCCATAGCCATTaGGTGCTGCAAGAATCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTCCHSH*VLQESQ Trigger: TTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCA...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGAGCCTGAGGGAAGTTaGATGGGTGGGGGTCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVEPEGS*MGGGRC Trigger: ACACCGACCCCCACCCATCAAACTTCCCTCAGGCTC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS TCA 90 bp | ATCTTCACTGGGCATTTGGCTTCATTCTGGACCAACTCCTGGTATTaGTTAACTACCCTCTCTGCGTCAGTCTTTGACCCAATGACAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFTGHLASFWTNSWY*LTTLSASVFDPMTN Trigger: GTTTGTCATTGGGTCAAAGACTGACGCAGAGAGGGTAGTTAATCAATACCAGGAGTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGCTGCCATAGCCATTaGGTGCTGCAAGAATCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLCCHSH*VLQESQ Trigger: TTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCA...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | GAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTAGAGCTGGCCACATTGTaGGCTGTGAGTCGTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ENISPCFHVRITGLCFCVELATL*AVSRQI Trigger: AATCTGACGACTCACAGCCAACAATGTGGCCAGCTC...TACACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGAGCTGGCCACATTGTaGGCTGTGAGTCGTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTELATL*AVSRQI Trigger: AATCTGACGACTCACAGCCAACAATGTGGCCAGCTC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | TGCTGCAAGAATCGCAACTGTTGTAGTTGCTGTTGTTGTTGTTGTTGCTGCTGCGTGGGATGGAGACATTaGGCTGTCATTTTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CCKNRNCCSCCCCCCCCCVGWRH*AVIFFI Trigger: GATGAAGAAAATGACAGCCAAATGTCTCCATCCCAC...GCAGCAGCAACAACAACAACAACAGCAACTACAACAGTTGCGATTCTTGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTATCTTCACTGGGCATTaGGCTTCATTCTGGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTIFTGH*ASFWTN Trigger: GTTGGTCCAGAATGAAGCCAAATGCCCAGTGAAGAT...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGCTGCGTCTGCTGCTGTaGCTGCTGGGTGTTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLLRLLL*LLGVKN Trigger: ATTTTTAACACCCAGCAGCAACAGCAGCAGACGCAG...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200441.5 |
||
| CDS CCA 90 bp | AACCAGTTTGAATGGTCATCAGCAGAGGAGTGGGATGGAGACATTTaGCTGTCATTTTCTTCATCTGCTTTCCACGGCTGTATTTTACCA | + |
|
Preference number: 5 (lower is better) Translates to: NQFEWSSAEEWDGDI*LSFSSSAFHGCILP Trigger: TGGTAAAATACAGCCGTGGAAAGCAGATGAAGAAAATGACAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGACCATTCAAACTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS CCA 90 bp | TTTGACCCAATGACAAACCAGTTTGAATGGTCATCAGCAGAGGAGTaGGATGGAGACATTTGGCTGTCATTTTCTTCATCTGCTTTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FDPMTNQFEWSSAEE*DGDIWLSFSSSAFH Trigger: GTGGAAAGCAGATGAAGAAAATGACAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGACCATTCAAACTGGTTTGTCATTGGGTCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
||
| CDS-3UTR CAA 90 bp | ACAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTCTTCATTTTACTCTTaGACTGGCTGCCTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGKHFTMFPCKNHRAVLLSSFYS*TGCLCA Trigger: GGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGA...CAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
||
| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTCTCTCAAGCAAAAGTTaGTCTTCCTGGGTCCACTTA | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTLSSKS*SSWVHL Trigger: TAAGTGGACCCAGGAAGACAAACTTTTGCTTGAGAG...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | ATCACAGGGCTGTGCTTCTGTGTAAAGTGTGCACACACAGCAATGCAAAATACTGTGGGATGGAGACATTaGGCTGTCATTTTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: ITGLCFCVKCAHTAMQNTVGWRH*AVIFFI Trigger: GATGAAGAAAATGACAGCCAAATGTCTCCATCCCAC...AGTATTTTGCATTGCTGTGTGTGCACACTTTACACAGAAGCACAGCCCTGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCACTGGGCAGTGTGTTaGCTACGAGACCTCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: FHSLKDISSPYVVSAIGMHWAVC*LRDLLM Trigger: CATCAGGAGGTCTCGTAGCAAACACACTGCCCAGTG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
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| CDS-3UTR CAA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGCTGCTGAGGAAGGCTTaGCTCAGGTCTGTTCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FHSLKDISSPYVVSAIGMLLRKA*LRSVLS Trigger: GCTGAGAACAGACCTGAGCAAAGCCTTCCTCAGCAG...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
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| CDS-3UTR CAA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCATGAGCTGGCCACATaGTTGGCTGTGAGTCGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ILTSRENSRNTIHSMVVFHELAT*LAVSRQ Trigger: CTGACGACTCACAGCCAACAATGTGGCCAGCTCATG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | CAGGAAAACATTTCACCATGTTTCCATGTAAGAATCACAGGGCTGTGCTTCTGTGTGGGATGGAGACATTaGGCTGTCATTTTCTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QENISPCFHVRITGLCFCVGWRH*AVIFFI Trigger: GATGAAGAAAATGACAGCCAAATGTCTCCATCCCAC...ACAGAAGCACAGCCCTGTGATTCTTACATGGAAACATGGTGAAATGTTTTCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGACCAACTCCTGGTATaGATTAACTACCCTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTDQLLV*INYPLC Trigger: GCAGAGAGGGTAGTTAATCAATACCAGGAGTTGGTC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATGCTGCCATAGCCATTaGGTGCTGCAAGAATCGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVCCHSH*VLQESQ Trigger: TTGCGATTCTTGCAGCACCAAATGGCTATGGCAGCA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
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| CDS-3UTR CAA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGAGCTGGCCACATTGTaGGCTGTGAGTCGTCAGATT | + |
|
Preference number: 5 (lower is better) Translates to: ILTSRENSRNTIHSMVVFELATL*AVSRQI Trigger: AATCTGACGACTCACAGCCAACAATGTGGCCAGCTC...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTACTTCCGAGAAAGGCTaGGCTTACACGATGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ILTSRENSRNTIHSMVVFTSEKG*AYTMEE Trigger: CTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGT...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATCTTCATTTTACTCTTaGACTGGCTGCCTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVSSFYS*TGCLCA Trigger: GGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029315.13 ENSMUST00000197502.5 ENSMUST00000200441.5 |
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| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACATGGGTCCACTTATGGTaGTCACTTGTTATAGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTWVHLW*SLVIEW Trigger: CCATTCTATAACAAGTGACAACCATAAGTGGACCCA...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATCCAACACCGTTTCATaGGGCGAGTGTTCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVSNTVS*GECSSS Trigger: AGAAGATGAACACTCGCCCAATGAAACGGTGTTGGA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTCTGCGTCTGCTGCTGTaGCTGCTGGGTGTTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: ILTSRENSRNTIHSMVVFLRLLL*LLGVKN Trigger: ATTTTTAACACCCAGCAGCAACAGCAGCAGACGCAG...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197502.5 ENSMUST00000200441.5 |
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| CDS TCA 90 bp | TACATAATCGTCTTTTACATCATGAGCTGGCCACATTGTTGGCTGTaGGTCGTCAGATTTGATGGATTCCTCCACTTTAGCATATTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: YIIVFYIMSWPHCWL*VVRFDGFLHFSIFF Trigger: GAAAAATATGCTAAAGTGGAGGAATCCATCAAATCTGACGACTCACAGCCAACAATGTGGCCAGCTCATGATGTAAAAGACGATTATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | TTCCATTCTTTGAAAGATATTTCTAGTCCTTACGTTGTTTCTGCGATTGGTATGTCTTCATTTTACTCTTaGACTGGCTGCCTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FHSLKDISSPYVVSAIGMSSFYS*TGCLCA Trigger: GGCACACAGGCAGCCAGTCAAAGAGTAAAATGAAGA...CATACCAATCGCAGAAACAACGTAAGGACTAGAAATATCTTTCAAAGAATGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029315.13 ENSMUST00000200441.5 |
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| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTATGCGCAATCCAAAGCTaGTTCTACAGCTTGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVCAIQS*FYSLLH Trigger: ATGCAACAAGCTGTAGAACAAGCTTTGGATTGCGCA...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | GTGCACACACAGCAATGCAAAATACTGACATCTCGGGAAAACAGTAGAAATACAGCAAGATGGTCAGCTTaGTTTTCTGATACTGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: VHTQQCKILTSRENSRNTARWSA*FSDTDY Trigger: GTAATCAGTATCAGAAAACAAAGCTGACCATCTTGC...TGTATTTCTACTGTTTTCCCGAGATGTCAGTATTTTGCATTGCTGTGTGTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | ATACTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTTGCGCAATCCAAAGCTaGTTCTACAGCTTGTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ILTSRENSRNTIHSMVVFCAIQS*FYSLLH Trigger: ATGCAACAAGCTGTAGAACAAGCTTTGGATTGCGCA...AAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS-3UTR CAA 90 bp | CTGACATCTCGGGAAAACAGTAGAAATACAATTCATTCAATGGTCGTGTTTGTAGCAAGATGGTCAGCTTaGTTTTCTGATACTGATTAC | + |
|
Preference number: 5 (lower is better) Translates to: LTSRENSRNTIHSMVVFVARWSA*FSDTDY Trigger: GTAATCAGTATCAGAAAACAAAGCTGACCATCTTGC...TACAAACACGACCATTGAATGAATTGTATTTCTACTGTTTTCCCGAGATGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS TCA 72 bp | ACGAGGTCTCCGCCTGTTCTGCCTCCTCCCCTGGACTaGGAGCGGCTGAACCACTACTGCTGTGTGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: TRSPPVLPPPLD*ERLNHYCCVTS Trigger: AGATGTCACACAGCAGTAGTGGTTCAGCCGCTCTCAGTCCAGGGGAGGAGGCAGAACAGGCGGAGACCTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000200439.2 |
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| CDS TCA 72 bp | TGGACGAGGTCTCCGCTTCTGCCTCCTCCCCTGGACTaGGAGCGGCTGAACCACTACTGCTGTGTGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: WTRSPLLPPPLD*ERLNHYCCVTS Trigger: AGATGTCACACAGCAGTAGTGGTTCAGCCGCTCTCAGTCCAGGGGAGGAGGCAGAAGCGGAGACCTCGTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199674.5 |
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| CDS CCA 72 bp | CGTGAGAGAGGTCCTGCTGGCGGTTCAGGGAGGACCTaGAGTACCTCTTCCAACACCGTTTCATTGGGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RERGPAGGSGRT*STSSNTVSLGE Trigger: CTCGCCCAATGAAACGGTGTTGGAAGAGGTACTCCAGGTCCTCCCTGAACCGCCAGCAGGACCTCTCTCACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS TCA 72 bp | GGTCGGTGTTTTACTCCCTTTCCCAAAACTGAAGACTaGATGGACGAGGTCTCCGCCTGTTCTGCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GRCFTPFPKTED*MDEVSACSASS Trigger: GGAGGAGGCAGAACAGGCGGAGACCTCGTCCATTCAGTCTTCAGTTTTGGGAAAGGGAGTAAAACACCGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000200439.2 |
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| CDS CCA 72 bp | GAGTGTTCATCTTCTGCCGGTTATAGAGCAGCCTATTaGCAGTGCACGCTACTGCCACCGATGGGTCAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: ECSSSAGYRAAY*QCTLLPPMGQD Trigger: GTCTTGACCCATCGGTGGCAGTAGCGTGCACTGCCAATAGGCTGCTCTATAACCGGCAGAAGATGAACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS CCA 72 bp | CCGAGAAAGGCTTGGCTTACACGATGGAGGAGGAGTTaGAGATTTAAGGAAGCTGCTGGCCTGCTGTGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PRKAWLTRWRRS*RFKEAAGLLCC Trigger: ACAGCACAGCAGGCCAGCAGCTTCCTTAAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGCCTTTCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS CCA 72 bp | CACAGAAGACTTCCGAGAAAGGCTTGGCTTACACGATaGAGGAGGAGTTGGAGATTTAAGGAAGCTGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: HRRLPRKAWLTR*RRSWRFKEAAG Trigger: GCCAGCAGCTTCCTTAAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGTCTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS TCA 72 bp | GGGCATTTGGCTTCATTCTGGACCAACTCCTGGTATTaGTTAACTACCCTCTCTGCGTCAGTCTTTGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GHLASFWTNSWY*LTTLSASVFDP Trigger: TGGGTCAAAGACTGACGCAGAGAGGGTAGTTAATCAATACCAGGAGTTGGTCCAGAATGAAGCCAAATGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS GCA 72 bp | AGGAGGTCTCTGCTGAGCACTTTCCACGATGTACTCTaGGCAATCCAAAGCTTGTTCTACAGCTTGTTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RRSLLSTFHDVL*AIQSLFYSLLH Trigger: ATGCAACAAGCTGTAGAACAAGCTTTGGATTGCGCAGAGTACATCGTGGAAAGTGCTCAGCAGAGACCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199652.5 ENSMUST00000199655.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS CCA 72 bp | TTGACTGAGGTCCACAGAAGACTTCCGAGAAAGGCTTaGCTTACACGATGGAGGAGGAGTTGGAGATTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: LTEVHRRLPRKA*LTRWRRSWRFK Trigger: CTTAAATCTCCAACTCCTCCTCCATCGTGTAAGCCAAGCCTTTCTCGGAAGTCTTCTGTGGACCTCAGTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS TCA 72 bp | GTCTTTTACATCATGAGCTGGCCACATTGTTGGCTGTaGGTCGTCAGATTTGATGGATTCCTCCACTTTAGC | + |
|
Preference number: 6 (lower is better) Translates to: VFYIMSWPHCWL*VVRFDGFLHFS Trigger: GCTAAAGTGGAGGAATCCATCAAATCTGACGACTCACAGCCAACAATGTGGCCAGCTCATGATGTAAAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS CCA 72 bp | ATGACAAACCAGTTTGAATGGTCATCAGCAGAGGAGTaGGATGGAGACATTTGGCTGTCATTTTCTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: MTNQFEWSSAEE*DGDIWLSFSSS Trigger: AGATGAAGAAAATGACAGCCAAATGTCTCCATCCCACTCCTCTGCTGATGACCATTCAAACTGGTTTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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| CDS CAA 72 bp | AAAGTGGATCCCCAAGAGACTGCAAGATGGTCAGCTTaGTTTTCTGATACTGATTACCACCTTCACATTCAA | + |
|
Preference number: 6 (lower is better) Translates to: KVDPQETARWSA*FSDTDYHLHIQ Trigger: TTGAATGTGAAGGTGGTAATCAGTATCAGAAAACAAAGCTGACCATCTTGCAGTCTCTTGGGGATCCACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170552.6 ENSMUST00000197502.5 ENSMUST00000199674.5 ENSMUST00000200439.2 |
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