Pregenerated sensors for SUPT16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035726Ensembl transcript IDs: ENSMUST00000046709.9
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCTTTCAGACACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATaGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTC | + |
|
Preference number: 1 (lower is better) Translates to: QLSDTKGKLSEEKRQ*DQQWEEPPALQHRL Trigger: GAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGTGTCTGAAAGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 90 bp | CCAGCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTaGAGAACTGCAGATCTGGAACTGATAAAGGGACGGACGGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PAQPSHSHQQSPRTF*RTADLELIKGRTED Trigger: GTCCTCCGTCCGTCCCTTTATCAGTTCCAGATCTGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTCCCTTGCCAGCCATCTaGTCGGGGCCACTGGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: WPSSRFSSCQDILGQDTTPLPAI*SGPLAH Trigger: ATGTGCCAGTGGCCCCGATCAGATGGCTGGCAAGGG...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTTGGCACATGTCCTGGTaGGCCTGGAATTCCCCGAGT | + |
|
Preference number: 2 (lower is better) Translates to: WPSSRFSSCQDILGQDTTWHMSW*AWNSPS Trigger: ACTCGGGGAATTCCAGGCCCACCAGGACATGTGCCA...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 90 bp | GCAGTGCCCAGCCTTGTGGGTGTGGCCTTCTTCCCGCTTCTCTTCTaGTCAAGATATTCTAGGCCAAGACACGACTTACTCTTTGAGATC | + |
|
Preference number: 2 (lower is better) Translates to: AVPSLVGVAFFPLLF*SRYSRPRHDLLFEI Trigger: GATCTCAAAGAGTAAGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCACACCCACAAGGCTGGGCACTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCAAGTCTCTCACTGTCTTaGGAATTCAGCTTTCAGACA | + |
|
Preference number: 2 (lower is better) Translates to: AQPSHSHQQSPRTFLRTASLSLS*EFSFQT Trigger: TGTCTGAAAGCTGAATTCCCAAGACAGTGAGAGACT...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTTGTAGCCTTAGCACTTaGGAGGCAGAGCGAGAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSCSLST*EAERED Trigger: ATCCTCTCGCTCTGCCTCCCAAGTGCTAAGGCTACA...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTGAAGAAAAGAGGCAATaGGATCAACAGTGGGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: WPSSRFSSCQDILGQDTTEEKRQ*DQQWEE Trigger: CTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTC...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTCATTTGAGGCTAGCCTaGCTTACAGTGACTTCAAGG | + |
|
Preference number: 2 (lower is better) Translates to: WPSSRFSSCQDILGQDTTHLRLA*LTVTSR Trigger: CCTTGAAGTCACTGTAAGCCAGGCTAGCCTCAAATG...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTGAGGCTAGCCTGGCTTACAGTGACTTCAAGGTAAGCCATGGCTGCATAGCATGTCTGCATAAAGAATaGAGCATAGGACCCAAGGTT | + |
|
Preference number: 2 (lower is better) Translates to: FEASLAYSDFKVSHGCIACLHKE*SIGPKV Trigger: AACCTTGGGTCCTATGCTCCATTCTTTATGCAGACA...TGCTATGCAGCCATGGCTTACCTTGAAGTCACTGTAAGCCAGGCTAGCCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTGTAGTATACGAAGCATaGCCATTCTTCCTTAGATGT | + |
|
Preference number: 2 (lower is better) Translates to: WPSSRFSSCQDILGQDTTVVYEA*PFFLRC Trigger: ACATCTAAGGAAGAATGGTCATGCTTCGTATACTAC...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 90 bp | CAAGATATTCTAGGCCAAGACACGACTTACTCTTTGAGATCCATGTaGACTCCTTTAAGCCTCCCTCTAGATTTCACCTGTAGTATACGA | + |
|
Preference number: 2 (lower is better) Translates to: QDILGQDTTYSLRSM*TPLSLPLDFTCSIR Trigger: TCGTATACTACAGGTGAAATCTAGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGGCCTAGAATATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CCA 72 bp | AAGTTGTCAGAAGAAAAGAGGCAATGGGATCAACAGTaGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KLSEEKRQWDQQ*EEPPALQHRLP Trigger: AGGGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCAGAGAGGATCATACATTaGAGGCTAGCCTGGCTTACA | + |
|
Preference number: 3 (lower is better) Translates to: AQPSHSHQQSPRTFLRTAERIIH*RLAWLT Trigger: TGTAAGCCAGGCTAGCCTCAAATGTATGATCCTCTC...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CCA 72 bp | GACACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATaGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: DTKGKLSEEKRQ*DQQWEEPPALQ Trigger: TTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CCA 72 bp | CTAAGTACAGTGACTCAAGCCTGTAGCCTTAGCACTTaGGAGGCAGAGCGAGAGGATCATACATTTGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSTVTQACSLST*EAEREDHTFEA Trigger: AGCCTCAAATGTATGATCCTCTCGCTCTGCCTCCCAAGTGCTAAGGCTACAGGCTTGAGTCACTGTACTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR TCA 72 bp | TCTTCTGATGCAGCAAAAACAACCCCAGAATGTGCATaGGGCAAGAAACCAGAACCACTGAAGACCAGACAC | + |
|
Preference number: 3 (lower is better) Translates to: SSDAAKTTPECA*GKKPEPLKTRH Trigger: GTGTCTGGTCTTCAGTGGTTCTGGTTTCTTGCCTCATGCACATTCTGGGGTTGTTTTTGCTGCATCAGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR-3UTR CAA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTGACACCAAAGGTAAGTaGTCAGAAGAAAAGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSDTKGK*SEEKRQ Trigger: TTGCCTCTTTTCTTCTGACAACTTACCTTTGGTGTC...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR GCA 72 bp | AGCCTGGCTTACAGTGACTTCAAGGTAAGCCATGGCTaGATAGCAAGACTGTCTCAAAACAGGAAAAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLAYSDFKVSHG*IARLSQNRKNK Trigger: TTTATTTTTCCTGTTTTGAGACAGTCTTGCTATGCAGCCATGGCTTACCTTGAAGTCACTGTAAGCCAGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CCA 72 bp | CTAGAAATGGTTAGTGGTCAGAGTCTCTCACTGTCTTaGGAATTCAGCTTTCAGACACCAAAGGTAAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LEMVSGQSLSLS*EFSFQTPKVSC Trigger: ACAACTTACCTTTGGTGTCTGAAAGCTGAATTCCCAAGACAGTGAGAGACTCTGACCACTAACCATTTCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR TCA 72 bp | TTAGATGTATCAGAAGAGACAATGGTAATTTGTGTTTaGGCACTGCACCACATATGGACTTGTAAGGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LDVSEETMVICV*ALHHIWTCKEE Trigger: TTCCTCCTTACAAGTCCATATGTGGTGCAGTGCTCAAACACAAATTACCATTGTCTCTTCTGATACATCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCAAGGCGGGTACAGTCTaGTCTCCAGGTGCTTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: RGNGINSGRSLLPFNTASKAGTV*SPGAFI Trigger: TATGAAAGCACCTGGAGAGCAGACTGTACCCGCCTT...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCGGAAGGGTGTGGCAATaGCAAACACAGGCATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: RGNGINSGRSLLPFNTASGRVWQ*QTQALS Trigger: TGATAATGCCTGTGTTTGGCATTGCCACACCCTTCC...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCAGCTGCCAGTTCCTTCTaGTGTGCTCTTCGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EPLKTRHQPSSAKSQSSAAASSF*CALRFS Trigger: AGAGAAGCGAAGAGCACATCAGAAGGAACTGGCAGC...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCATGCTGTTCCCCTTTCTaGTCTGTCAGCCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPLKTRHQPSSAKSQSSACCSPF*SVSLLF Trigger: GAAGAGGAGGCTGACAGAGCAGAAAGGGGAACAGCA...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCTCTTCGCTTCTCTTCTaGAGTCATCTCATTCCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGNGINSGRSLLPFNTASSSLLF*SHLIPC Trigger: ACAAGGAATGAGATGACTGCAGAAGAGAAGCGAAGA...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCACTCGTTGAGCTGTGCTaGCAGTTCCTTCTGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQPSHSHQQSPRTFLRTALVELC*QFLLMC Trigger: GCACATCAGAAGGAACTGGCAGCACAGCTCAACGAG...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | GTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAGGTCAACCATCAGAGTaGGAACAAGGTTGGAGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VRRKEAMGSTVGGASCPSGQPSE*EQGWSS Trigger: ACTGCTCCAACCTTGTTCGCACTCTGATGGTTGACC...TGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCAATGCCACAACAGCGCTaGTGTCTACTTTGTCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: AQPSHSHQQSPRTFLRTAMPQQR*CLLCQS Trigger: GCTTTGACAAAGTAGACATCAGCGCTGTTGTGGCAT...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | AGCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCAGAGGTGATGCTGGCTaGTTTCTTCATCAGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAKSQSSAEPKDVLENCRGDAG*FLHQVE Trigger: CTCAACCTGATGAAGAAAGCAGCCAGCATCACCTCT...GCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCACCCTGCATTCTCTTCTaGGCAATGTTTGGACGAATG | + |
|
Preference number: 4 (lower is better) Translates to: AQPSHSHQQSPRTFLRTAPCILF*AMFGRM Trigger: CATTCGTCCAAACATTGCCCAGAAGAGAATGCAGGG...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 72 bp | CCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTaGAGAACTGCAGATCTGGAACTGATAAAGGGACGG | + |
|
Preference number: 4 (lower is better) Translates to: PSHSHQQSPRTF*RTADLELIKGR Trigger: CCGTCCCTTTATCAGTTCCAGATCTGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTGACATGAGCCTCCAGTaGGCCCTGCATTCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSDMSLQ*ALHSLL Trigger: CAGAAGAGAATGCAGGGCTCACTGGAGGCTCATGTC...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGCTAGCCTGGCTTACAGTGACTTCAAGGTAAGCCATGGCTGCATAGCATTCCTCGTTGAGCTGTaGTGCCAGTTCCTTCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: FEASLAYSDFKVSHGCIAFLVEL*CQFLLM Trigger: CATCAGAAGGAACTGGCAGCACAGCTCAACGAGGAA...TGCTATGCAGCCATGGCTTACCTTGAAGTCACTGTAAGCCAGGCTAGCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCAATTTCTCGTTCCATCTaGTCAGCATACAGGTCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EPLKTRHQPSSAKSQSSAISRSI*SAYRSS Trigger: AGATGACCTGTATGCTGAGCAGATGGAACGAGAAAT...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTCTTTTTCTTCGGGGGTaGAGAGCTGTGTCTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: WPSSRFSSCQDILGQDTTLFLRG*RAVSGT Trigger: GGTTCCAGACACAGCTCTGCACCCCCGAAGAAAAAG...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | TTTGAGGCTAGCCTGGCTTACAGTGACTTCAAGGTAAGCCATGGCTGCATAGCACCTCTTTCACAGCAATaGTGTATGCCACAACAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: FEASLAYSDFKVSHGCIAPLSQQ*CMPQQR Trigger: GCGCTGTTGTGGCATACACCATTGCTGTGAAAGAGG...TGCTATGCAGCCATGGCTTACCTTGAAGTCACTGTAAGCCAGGCTAGCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTTCGCCATCACAGGGCTaGAACAGCGCATGCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WPSSRFSSCQDILGQDTTSPSQG*NSACLI Trigger: TATCAAGCATGCGCTGTTCCAGCCCTGTGATGGCGA...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 72 bp | AGCCTTGTGGGTGTGGCCTTCTTCCCGCTTCTCTTCTaGTCAAGATATTCTAGGCCAAGACACGACTTACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLVGVAFFPLLF*SRYSRPRHDLL Trigger: GAGTAAGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCACACCCACAAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAGCCCCAAAATGCATATaGTTCTTATCACTCACCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRRKEAMGSTVGGASCPSAPKCI*FLSLTT Trigger: TGTGGTGAGTGATAAGAATCATATGCATTTTGGGGC...TGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCAAGCAATTCTGGTTTCTaGTTCTTAACCACATCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EPLKTRHQPSSAKSQSSASNSGF*FLTTSM Trigger: CATGGATGTGGTTAAGAAGCAGAAACCAGAATTGCT...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCAAGGTGCTTTCATATTTaGAGCTCGGTATGTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: EPLKTRHQPSSAKSQSSARCFHI*SSVCNF Trigger: GAAATTACATACCGAGCTTCAAATATGAAAGCACCT...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | ACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCTTGAACTTCCTGAGTaGGGTCAACCATCAGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TKGKLSEEKRQWDQQWEELELPE*GQPSEC Trigger: GCACTCTGATGGTTGACCCCACTCAGGAAGTTCAAG...CTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTTGTCACCACAAAGGGTaGCCACTCTGTAGCATTTAC | + |
|
Preference number: 4 (lower is better) Translates to: WPSSRFSSCQDILGQDTTCHHKG*PLCSIY Trigger: GTAAATGCTACAGAGTGGCCACCCTTTGTGGTGACA...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | ACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGTACTCCGGTTTAGGTTaGTCACCAGCGAGTCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKGKLSEEKRQWDQQWEEYSGLG*SPASLV Trigger: AACAAGACTCGCTGGTGATCAACCTAAACCGGAGTA...CTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | TTTGAGGCTAGCCTGGCTTACAGTGACTTCAAGGTAAGCCATGGCTGCATAGCACCGAACTTTCTCATCTaGATCCACTATTTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: FEASLAYSDFKVSHGCIAPNFLI*IHYFHD Trigger: GTCATGGAAATAGTGGATGCAGATGAGAAAGTTCGG...TGCTATGCAGCCATGGCTTACCTTGAAGTCACTGTAAGCCAGGCTAGCCTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGTCCCAAAAGGTCCTCTaGCTCATCTTTCTCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKGKLSEEKRQWDQQWEESQKVL*LIFLFL Trigger: GAGGAAGAGAAAGATGAGGCAGAGGACCTTTTGGGA...CTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTGATTTTCGAGCTTTCTaGATCTGCTGTTCCCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSDFRAF*ICCSPF Trigger: GAAAGGGGAACAGCAGATTCAGAAAGCTCGAAAATC...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 72 bp | CTAGGCCAAGACACGACTTACTCTTTGAGATCCATGTaGACTCCTTTAAGCCTCCCTCTAGATTTCACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LGQDTTYSLRSM*TPLSLPLDFTC Trigger: ACAGGTGAAATCTAGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGGCCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTTCAGCCAATTTGCTATaGCGAACTTTCTCATCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSSANLL*RTFSSA Trigger: TGCAGATGAGAAAGTTCGGCATAGCAAATTGGCTGA...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR GCA 90 bp | ACCAAAGGTAAGTTGTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGGGCTGGAACAGCGCATaGTTGATATTATTGTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKGKLSEEKRQWDQQWEEGWNSA*LILLYR Trigger: TCTGTACAATAATATCAAGCATGCGCTGTTCCAGCC...CTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTCCACCGATACAACAATaGCATCAATACTGGCATACT | + |
|
Preference number: 4 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSPPIQQ*HQYWHT Trigger: AGTATGCCAGTATTGATGCCATTGTTGTATCGGTGG...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CCA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTAGTAAGAATAGTGGCTaGACCATCCTCATCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSSKNSG*TILIYK Trigger: CTTGTAGATGAGGATGGTCCAGCCACTATTCTTACT...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| 3UTR CAA 72 bp | GTCTTGGGAATTCAGCTTTCAGACACCAAAGGTAAGTaGTCAGAAGAAAAGAGGCAATGGGATCAACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGIQLSDTKGK*SEEKRQWDQQW Trigger: CCACTGTTGATCCCATTGCCTCTTTTCTTCTGACAACTTACCTTTGGTGTCTGAAAGCTGAATTCCCAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR TCA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTACATACTTATGTTCTTaGTTGTGGCAATATGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: WPSSRFSSCQDILGQDTTTYLCS*LWQYGR Trigger: CCTTCCATATTGCCACAATCAAGAACATAAGTATGT...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCGAAGGACCAGCCACCTaGTTCAAAGAAGCCCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: RGNGINSGRSLLPFNTASEGPAT*FKEALG Trigger: CCCGAGGGCTTCTTTGAACAAGGTGGCTGGTCCTTC...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCGCTTTCTTCATCAGGTaGAGCTCACCGTCCTCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGNGINSGRSLLPFNTASAFFIR*SSPSSF Trigger: GAAAGAGGACGGTGAGCTCAACCTGATGAAGAAAGC...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCTTACTCCGGTTTAGGTaGATCACCAGCGAGTCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGNGINSGRSLLPFNTASLLRFR*ITSESC Trigger: ACAAGACTCGCTGGTGATCAACCTAAACCGGAGTAA...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCGCCATGAAGATGATTTaGTCATCACAGAAGACCATG | + |
|
Preference number: 5 (lower is better) Translates to: RGNGINSGRSLLPFNTASAMKMI*SSQKTM Trigger: CATGGTCTTCTGTGATGACAAAATCATCTTCATGGC...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAACACCGCCTCCGCAACAGGAATAGCATaGATCATCGTGACTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGNGINSGRSLLPFNTASATGIA*IIVTFL Trigger: CAAGAAAGTCACGATGATCAATGCTATTCCTGTTGC...GGAGGCGGTGTTGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCCGGTATGTAATTTCCTaGACAAAAGTGGCTTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSAKSQSSAEPKDVLENCRYVIS*TKVASG Trigger: CCCTGAAGCCACTTTTGTCAAGGAAATTACATACCG...GCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAGATCACCAGCGAGTCTaGTTTTACAATGCCCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VRRKEAMGSTVGGASCPSDHQRV*FYNALF Trigger: AAAGAGGGCATTGTAAAACAAGACTCGCTGGTGATC...TGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCAAACTCCACCTTCTTTTaGCTGGCCATGAAGATGATT | + |
|
Preference number: 5 (lower is better) Translates to: VRRKEAMGSTVGGASCPSNSTFF*LAMKMI Trigger: AATCATCTTCATGGCCAGCAAAAAGAAGGTGGAGTT...TGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAAGAAAAGAGGCAATGGGATCAACAGTGGGAGGAGCCTCCTGCCCTTCATCCTTAAAGAACTTGTaGAAGACCTCAGAGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VRRKEAMGSTVGGASCPSSLKNL*KTSEVM Trigger: CATCACCTCTGAGGTCTTCAACAAGTTCTTTAAGGA...TGAAGGGCAGGAGGCTCCTCCCACTGTTGATCCCATTGCCTCTTTTCTTCTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GAACCACTGAAGACCAGACACCAGCCCAGCTCAGCCAAGTCACAGTCATCAGCAGCATGCTTGATATTATaGTACAGAATATCCACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EPLKTRHQPSSAKSQSSAACLIL*YRISTL Trigger: CAAGGTGGATATTCTGTACAATAATATCAAGCATGC...TGCTGATGACTGTGACTTGGCTGAGCTGGGCTGGTGTCTGGTCTTCAGTGGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCCAAGTCACAGTCATCAGCAGAGCCCAAGGACGTTCTTGAGAACTGCAGACATACTTATGTTCTaGATTGTGGCAATATGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AQPSHSHQQSPRTFLRTADILMF*IVAIWK Trigger: CTTCCATATTGCCACAATCAAGAACATAAGTATGTC...TGCAGTTCTCAAGAACGTCCTTGGGCTCTGCTGATGACTGTGACTTGGCTGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | TGGCCTTCTTCCCGCTTCTCTTCTTGTCAAGATATTCTAGGCCAAGACACGACTCTTTCCTTAAAGAACTaGTTGAAGACCTCAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WPSSRFSSCQDILGQDTTLSLKN*LKTSEV Trigger: CACCTCTGAGGTCTTCAACAAGTTCTTTAAGGAAAG...AGTCGTGTCTTGGCCTAGAATATCTTGACAAGAAGAGAAGCGGGAAGAAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTATGTCATGTCATTTTAGGAGTTGTCTGCATAAAGAATGGAGCATAGGACTCTTCGCTTCCTCGTaGAGCTGTGCTGCCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSMSCHFRSCLHKEWSIGLFASS*SCAASS Trigger: GGAACTGGCAGCACAGCTCAACGAGGAAGCGAAGAG...TCCTATGCTCCATTCTTTATGCAGACAACTCCTAAAATGACATGACATAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | CCAAGACACGACTTACTCTTTGAGATCCATGTTGACTCCTTTAAGCCTCCCTCTTGGAACAGCGCATGCTaGATATTATTGTACAGAATA | + |
|
Preference number: 5 (lower is better) Translates to: PRHDLLFEIHVDSFKPPSWNSAC*ILLYRI Trigger: TATTCTGTACAATAATATCAAGCATGCGCTGTTCCA...AGAGGGAGGCTTAAAGGAGTCAACATGGATCTCAAAGAGTAAGTCGTGTCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTATGTCATGTCATTTTAGGAGTTGTCTGCATAAAGAATGGAGCATAGGATCATTGCCTTTAGTATaGGCAATCTGTTTCAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSMSCHFRSCLHKEWSIGSLPLV*AICFRN Trigger: GTTTCTGAAACAGATTGCCAATACTAAAGGCAATGA...TCCTATGCTCCATTCTTTATGCAGACAACTCCTAAAATGACATGACATAGAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTATGTCATGTCATTTTAGGAGTTGTCTGCATAAAGAATGGAGCATAGGAATAGCGTCAATCATTTaGTCAAAGCTGCTCTTGTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSMSCHFRSCLHKEWSIGIASII*SKLLLL Trigger: TAACAAGAGCAGCTTTGACAAAATGATTGACGCTAT...TCCTATGCTCCATTCTTTATGCAGACAACTCCTAAAATGACATGACATAGAAAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS GCA 72 bp | GTTGAGCTCACCGTCCTCTTTCACAGCAATGGTGTATaGCACAACAGCGCTGATGTCTACTTTGTCAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VELTVLFHSNGV*HNSADVYFVKA Trigger: GGCTTTGACAAAGTAGACATCAGCGCTGTTGTGGCATACACCATTGCTGTGAAAGAGGACGGTGAGCTCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||
| CDS CAA 72 bp | TCTGTGTACTTTAGGTCACAGGAATTCAGCCACTCCTaGATGGGGTCTAGAGAGGCAACAGGAATAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: SVYFRSQEFSHS*MGSREATGIAL Trigger: CAATGCTATTCCTGTTGCCTCTCTAGACCCCATCAAGGAGTGGCTGAATTCCTGTGACCTAAAGTACACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046709.9 |
||