Pregenerated sensors for SUOX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049858Ensembl transcript IDs: ENSMUST00000054764.9
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTaGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAAC | + |
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Preference number: 1 (lower is better) Translates to: ILEAEAGKPLSLRSA*YRVSSRTTRATQRN Trigger: GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR-3UTR TCA 90 bp | CGAGCTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGTTAAGGCTGGGTTGGTaGAGAGGTCTAGGTGGTTCT | + |
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Preference number: 2 (lower is better) Translates to: RAALSPEQPLSKHRVRGQLRLGW*RGLGGS Trigger: AGAACCACCTAGACCTCTTCACCAACCCAGCCTTAA...CTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR CAA 90 bp | TTTAGTCCCAGCATTCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTaGAGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: FSPSILEAEAGKPLS*RSAWYRVSSRTTRA Trigger: AGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGAATGCTGGGACTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR-3UTR TCA 90 bp | AGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTAGTTTATCTACAGCAATaGGGATTAAGGCTGGGTTGG | + |
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Preference number: 2 (lower is better) Translates to: SLSPSTGSGARRDVCAGVVYLQQ*GLRLGW Trigger: CCAACCCAGCCTTAATCCTCATTGCTGTAGATAAAC...TACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR-3UTR GCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTGAAGAATCTAAGCAATaGAAAATAAGGCCCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: SGGRGRQTSEFEISLVQSEESKQ*KIRPRW Trigger: CCATCTGGGCCTTATTTTGCATTGCTTAGATTCTTC...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR CAA 90 bp | AGAGGAAGGAAATGTTTATCTACAGCAATGAGGATTAAGGCTGGGTaGGTGAAGAGGTCTAGGTGGTTCTTTGGGTACAAATGGTGCCAT | + |
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Preference number: 2 (lower is better) Translates to: RGRKCLSTAMRIKAG*VKRSRWFFGYKWCH Trigger: ATGGCACCATTTGTACCCAAAGAACCACCTAGACCTCTTCACCAACCCAGCCTTAATCCTCATTGCTGTAGATAAACATTTCCTTCCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR-3UTR CAA 90 bp | CAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTACAGCTTAAGAGGTCTAGGTGGTTCTTaGGGTACAAATGGTGCCATT | + |
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Preference number: 3 (lower is better) Translates to: QAQGQGPEEMCVLGYSLRGLGGS*GTNGAI Trigger: AATGGCACCATTTGTACCCAAAGAACCACCTAGACC...TCTTAAGCTGTACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | CGAGCTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGGGCCCCAGCCCAGCGTaGTGTGCTGATGGCCCCTGT | + |
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Preference number: 4 (lower is better) Translates to: RAALSPEQPLSKHRVRGQGPSPA*CADGPC Trigger: ACAGGGGCCATCAGCACAGCACGCTGGGCTGGGGCC...CTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | CTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGAGATAGTCACCTCGCCTaGCTCTACAATGGCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: LLSHPSSLSPSTGSGARRDSHLA*LYNGPI Trigger: GATGGGGCCATTGTAGAGTCAGGCGAGGTGACTATC...TCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | CGAGCTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGGACCTTTCACTTCCTTaGCCTTACTCATTTCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: RAALSPEQPLSKHRVRGQDLSLP*PYSFRS Trigger: GCTCCGAAATGAGTAAGGTCAAGGAAGTGAAAGGTC...CTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAGCTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | AGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTAGAGTCACAGAGTCGGTaGCCAGCCTGGGCTAACACA | + |
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Preference number: 4 (lower is better) Translates to: SLSPSTGSGARRDVCAGVESQSR*PAWANT Trigger: TGTGTTAGCCCAGGCTGGTCACCGACTCTGTGACTC...TACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | AGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAACGGTGCCAGGCATTGCTaGGTACGCCCCGAAGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: RSAWYRVSSRTTRATQRNGARHC*VRPEGS Trigger: GGAACCTTCGGGGCGTACTCAGCAATGCCTGGCACC...GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGACATAGGCAGTTCCAGTaGGGTCTGAATCCAGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLSHPSSLSPSTGSGARRHRQFQ*GLNPVL Trigger: AAGGACTGGATTCAGACCCCACTGGAACTGCCTATG...TCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGATGGGGCTACAGTGTCTaGCTGCACATTGTAACTGTC | + |
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Preference number: 4 (lower is better) Translates to: LLSHPSSLSPSTGSGARRWGYSV*LHIVTV Trigger: GACAGTTACAATGTGCAGCCAGACACTGTAGCCCCA...TCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | CCTCTGAGTTTGAGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTATCCGTGGTGACTCCTaGGAAGCCCTACACCGATGC | + |
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Preference number: 4 (lower is better) Translates to: PLSLRSAWYRVSSRTTRAIRGDS*EALHRC Trigger: GCATCGGTGTAGGGCTTCTCAGGAGTCACCACGGAT...AGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCTCAAACTCAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | AGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAACCCCAGCGTGCTGTGCTaGTGGCCCCTGTTCTCCATT | + |
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Preference number: 4 (lower is better) Translates to: RSAWYRVSSRTTRATQRNPSVLC*WPLFSI Trigger: AATGGAGAACAGGGGCCATCAGCACAGCACGCTGGG...GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | CAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTACAGCTTAAGACCGAGCCATTTGACATaGCGGGCACCTACTACACCA | + |
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Preference number: 4 (lower is better) Translates to: QAQGQGPEEMCVLGYSLRPSHLT*RAPTTP Trigger: TGGTGTAGTAGGTGCCCGTCATGTCAAATGGCTCGG...TCTTAAGCTGTACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | AGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTAAAGGTAAGGCTGGGATaGTGGGGCTCAAGTGAATCA | + |
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Preference number: 4 (lower is better) Translates to: SLSPSTGSGARRDVCAGVKVRLG*WGSSES Trigger: TGATTCACTTGAGCCCCAGCATCCCAGCCTTACCTT...TACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTACAGCTTAAGAGACTCTGATGGCCTGTaGAAGCCTCACAACCACGGA | + |
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Preference number: 4 (lower is better) Translates to: QAQGQGPEEMCVLGYSLRDSDGL*KPHNHG Trigger: TCCGTGGTTGTGAGGCTTCCACAGGCCATCAGAGTC...TCTTAAGCTGTACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CGAGCTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGCAAGTGAATCATTTGTaGAGCATGCTTGAATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: RAALSPEQPLSKHRVRGQQVNHL*SMLECR Trigger: TCTGCATTCAAGCATGCTCCACAAATGATTCACTTG...CTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAGCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | TGTAGCTGGGCAGAGGTGGTGCAAACCTTTAGTCCCAGCATTCTGGAGGCAGAGTGCTCAGCCGGCACCTaGGCTTTCAACTGCCATATT | + |
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Preference number: 4 (lower is better) Translates to: CSWAEVVQTFSPSILEAECSAGT*AFNCHI Trigger: AATATGGCAGTTGAAAGCTCAGGTGCCGGCTGAGCA...CTCTGCCTCCAGAATGCTGGGACTAAAGGTTTGCACCACCTCTGCCCAGCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTCTCGAATCACAGCCCTaGCACCACCACTCCATGCAT | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQTSEFEISLVQSLESQP*HHHSMH Trigger: ATGCATGGAGTGGTGGTGGCAGGGCTGTGATTCGAG...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCTGGGCAGAGGTGGTGCAAACCTTTAGTCCCAGCATTCTGGAGGCAGAGCGCCTGACTCTACAATaGCCCCATCTTGAGGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: CSWAEVVQTFSPSILEAERLTLQ*PHLEVV Trigger: CACAACCTCAAGATGGGGCCATTGTAGAGTCAGGCG...CTCTGCCTCCAGAATGCTGGGACTAAAGGTTTGCACCACCTCTGCCCAGCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTCCGAAGGTTCCAGATTaGGGCTACAGTGTCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQTSEFEISLVQSPKVPD*GYSVWL Trigger: CAGCCAGACACTGTAGCCCCAATCTGGAACCTTCGG...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | AGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAACAGCCAGAGGGATCGATaGTCCATAGGCAGTTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: RSAWYRVSSRTTRATQRNSQRDR*SIGSSS Trigger: ACTGGAACTGCCTATGGAGCATCGATCCCTCTGGCT...GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | TGTAGCTGGGCAGAGGTGGTGCAAACCTTTAGTCCCAGCATTCTGGAGGCAGAGAGTAACTCACGTACATaGGGCTGGTTGTGCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: CSWAEVVQTFSPSILEAESNSRT*GWLCTA Trigger: TGCTGTGCACAACCAGCCCCATGTACGTGAGTTACT...CTCTGCCTCCAGAATGCTGGGACTAAAGGTTTGCACCACCTCTGCCCAGCTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTACAGCTTAAGAGCATTAAAGGGGCGCTaGCTATTAATCCTCAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QAQGQGPEEMCVLGYSLRALKGR*LLILRA Trigger: AGCCCTGAGGATTAATAGCCAGCGCCCCTTTAATGC...TCTTAAGCTGTACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTGGTCCACAAATTTTGTaGCATCGAAGACCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQTSEFEISLVQSGPQIL*HRRPQS Trigger: GCTCTGAGGTCTTCGATGTCACAAAATTTGTGGACC...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | AGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAACGATGGTCCTCCTGGATaGAGGTCCACAAATTTTGTG | + |
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Preference number: 4 (lower is better) Translates to: RSAWYRVSSRTTRATQRNDGPPG*RSTNFV Trigger: CACAAAATTTGTGGACCTGCATCCAGGAGGACCATC...GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | ATTCCACACACCACACACACATCTGAAGAATCTAAGCAATGCAAAATAAGGCCCCGGCTTCAGGATCCATaGCCCGAGCCAGAGGGATCG | + |
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Preference number: 4 (lower is better) Translates to: IPHTTHTSEESKQCKIRPRLQDP*PEPEGS Trigger: CGATCCCTCTGGCTCGGGCCATGGATCCTGAAGCCG...GGGCCTTATTTTGCATTGCTTAGATTCTTCAGATGTGTGTGTGGTGTGTGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | CAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTACAGCTTAAGAGTCCCAGTCCACAGATaGAGAAAAGCCTTTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: QAQGQGPEEMCVLGYSLRVPVHR*RKAFVI Trigger: GATTACAAAGGCTTTTCTCCATCTGTGGACTGGGAC...TCTTAAGCTGTACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTTGGATAGGTAGTTCCTaGATTGATGGAGCTAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQTSEFEISLVQSWIGSS*IDGARS Trigger: TGACCTAGCTCCATCAATTCAGGAACTACCTATCCA...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | AGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGAGATGTGTGTGCTGGGGTAGAAGAAAATAGGATTTaGTGTGATGTAGCCTTCAGT | + |
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Preference number: 4 (lower is better) Translates to: SLSPSTGSGARRDVCAGVEENRI*CDVAFS Trigger: ACTGAAGGCTACATCACACCAAATCCTATTTTCTTC...TACCCCAGCACACACATCTCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | ATTCCACACACCACACACACATCTGAAGAATCTAAGCAATGCAAAATAAGGCCCAAGCCCAGGCCTTCCTaGGACACTGTTCCTCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IPHTTHTSEESKQCKIRPKPRPS*DTVPLP Trigger: AGGGAGAGGAACAGTGTCCCAGGAAGGCCTGGGCTT...GGGCCTTATTTTGCATTGCTTAGATTCTTCAGATGTGTGTGTGGTGTGTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTTGTTTGGGAAACTTATaGAAATCATCCAAGGACAGA | + |
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Preference number: 4 (lower is better) Translates to: SGGRGRQTSEFEISLVQSCLGNL*KSSKDR Trigger: TCTGTCCTTGGATGATTTGCATAAGTTTCCCAAACA...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | ATTCCACACACCACACACACATCTGAAGAATCTAAGCAATGCAAAATAAGGCCCATGCTGGGGCTCAAGTaGATCATTTGTGGAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: IPHTTHTSEESKQCKIRPMLGLK*IICGAC Trigger: GCATGCTCCACAAATGATTCACTTGAGCCCCAGCAT...GGGCCTTATTTTGCATTGCTTAGATTCTTCAGATGTGTGTGTGGTGTGTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | ATTCCACACACCACACACACATCTGAAGAATCTAAGCAATGCAAAATAAGGCCCCCATCTCCGAGTCCTTaGGTTATCATCAGAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: IPHTTHTSEESKQCKIRPPSPSP*VIIRKG Trigger: ACCTTTTCTGATGATAACTCAAGGACTCGGAGATGG...GGGCCTTATTTTGCATTGCTTAGATTCTTCAGATGTGTGTGTGGTGTGTGGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR TCA 90 bp | AGTACGTACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAAATCCTCAGGGCTGGATaGCGAATAGGATCATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: STYKVTNQGEEGNVYLQQILRAG*RIGSSA Trigger: TGCTGATGATCCTATTCGTCATCCAGCCCTGAGGAT...TTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGTACGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CCA 90 bp | AGTACGTACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAAGTAAGGCTGGGATGCTaGGGCTCAAGTGAATCATTT | + |
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Preference number: 4 (lower is better) Translates to: STYKVTNQGEEGNVYLQQVRLGC*GSSESF Trigger: AAATGATTCACTTGAGCCCCAGCATCCCAGCCTTAC...TTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGTACGTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| 3UTR CAA 72 bp | AAATGTTTATCTACAGCAATGAGGATTAAGGCTGGGTaGGTGAAGAGGTCTAGGTGGTTCTTTGGGTACAAA | + |
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Preference number: 4 (lower is better) Translates to: KCLSTAMRIKAG*VKRSRWFFGYK Trigger: TTTGTACCCAAAGAACCACCTAGACCTCTTCACCAACCCAGCCTTAATCCTCATTGCTGTAGATAAACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR GCA 90 bp | AGTACGTACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAAATCATTTGTGGAGCATaGTTGAATGCAGAGCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: STYKVTNQGEEGNVYLQQIICGA*LNAEPQ Trigger: TTGAGGCTCTGCATTCAAGCATGCTCCACAAATGAT...TTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGTACGTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | CTGCTCTCTCACCCGAGCAGCCTCTCTCCAAGCACAGGGTCAGGGGCCAGAAGACCCGAAGGTTCCAGATaGGGGCTACAGTGTCTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLSHPSSLSPSTGSGARRPEGSR*GLQCLA Trigger: AGCCAGACACTGTAGCCCCAATCTGGAACCTTCGGG...TCTTCTGGCCCCTGACCCTGTGCTTGGAGAGAGGCTGCTCGGGTGAGAGAGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CCA 90 bp | GACACGGTGCCAGGCATTGCTGAGTACGCCCCGAAGGTTCCAGATTaGGGCTACAGTGTCTGGCTGCACATTGTAACTGTCATCTACAGC | + |
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Preference number: 5 (lower is better) Translates to: DTVPGIAEYAPKVPD*GYSVWLHIVTVIYS Trigger: GCTGTAGATGACAGTTACAATGTGCAGCCAGACACTGTAGCCCCAATCTGGAACCTTCGGGGCGTACTCAGCAATGCCTGGCACCGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 90 bp | AGGGTTGTTGTGAGAACGCACATCCTCTTTAGAGTACATCCGTGGTaGCTCCTGAGAAGCCCTACACCGATGCTCATGGTAGACCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: RVVVRTHILFRVHPW*LLRSPTPMLMVDQH Trigger: GTGCTGGTCTACCATGAGCATCGGTGTAGGGCTTCTCAGGAGTCACCACGGATGTACTCTAAAGAGGATGTGCGTTCTCACAACAACCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | TCTGGAGGCAGAGGCAGGCAAACCTCTGAGTTTGAGATCAGCCTGGTACAGAGTCTGCTAGCATCAGTTTaGATGGTCCTCCTGGATGCA | + |
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Preference number: 5 (lower is better) Translates to: SGGRGRQTSEFEISLVQSLLASV*MVLLDA Trigger: TGCATCCAGGAGGACCATCAAAACTGATGCTAGCAG...ACTCTGTACCAGGCTGATCTCAAACTCAGAGGTTTGCCTGCCTCTGCCTCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | TGTAGCTGGGCAGAGGTGGTGCAAACCTTTAGTCCCAGCATTCTGGAGGCAGAGAGACCTTTCACTTCCTaGACCTTACTCATTTCGGAG | + |
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Preference number: 5 (lower is better) Translates to: CSWAEVVQTFSPSILEAERPFTS*TLLISE Trigger: CTCCGAAATGAGTAAGGTCAAGGAAGTGAAAGGTCT...CTCTGCCTCCAGAATGCTGGGACTAAAGGTTTGCACCACCTCTGCCCAGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 90 bp | GCATCAGTTTTGATGGTCCTCCTGGATGCAGGTCCACAAATTTTGTaGCATCGAAGACCTCAGAGCCTAGAGTTACCCAGACTCCAGTTT | + |
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Preference number: 5 (lower is better) Translates to: ASVLMVLLDAGPQIL*HRRPQSLELPRLQF Trigger: AAACTGGAGTCTGGGTAACTCTAGGCTCTGAGGTCTTCGATGTCACAAAATTTGTGGACCTGCATCCAGGAGGACCATCAAAACTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | AGATCAGCCTGGTACAGAGTGAGTTCCCGGACAACCAGGGCTACACAGAGAAACCTGTCATCTACAGCTTaGCAAATGATGTTCAATTCC | + |
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Preference number: 5 (lower is better) Translates to: RSAWYRVSSRTTRATQRNLSSTA*QMMFNS Trigger: GGAATTGAACATCATTTGCAAAGCTGTAGATGACAG...GTTTCTCTGTGTAGCCCTGGTTGTCCGGGAACTCACTCTGTACCAGGCTGATCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | AGTACGTACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAACTCAAGGGGGTTGACTaGACTCTGATGGCCTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: STYKVTNQGEEGNVYLQQLKGVD*TLMACG Trigger: TCCACAGGCCATCAGAGTCAAGTCAACCCCCTTGAG...TTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGTACGTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | ACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAATGAGGATGATGTTCAATTCCTTTaGCTCAGCCGGCACCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: TRLRIKERKEMFIYSNEDDVQFL*LSRHLS Trigger: GCTCAGGTGCCGGCTGAGCAAAAGGAATTGAACATC...ATCCTCATTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS-3UTR CAA 90 bp | AGTACGTACAAGGTTACGAATCAAGGAGAGGAAGGAAATGTTTATCTACAGCAAATTTGTGGAGCATGCTaGAATGCAGAGCCTCAAGGG | + |
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Preference number: 5 (lower is better) Translates to: STYKVTNQGEEGNVYLQQICGAC*NAEPQG Trigger: CCCTTGAGGCTCTGCATTCAAGCATGCTCCACAAAT...TTGCTGTAGATAAACATTTCCTTCCTCTCCTTGATTCGTAACCTTGTACGTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CCA 72 bp | TTTCATAAGCCAGGAGGACCTCGGCTTCAGGATCCATaGCCCGAGCCAGAGGGATCGATGCTCCATAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: FHKPGGPRLQDP*PEPEGSMLHRQ Trigger: CTGCCTATGGAGCATCGATCCCTCTGGCTCGGGCCATGGATCCTGAAGCCGAGGTCCTCCTGGCTTATGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CCA 72 bp | CCAGGCATTGCTGAGTACGCCCCGAAGGTTCCAGATTaGGGCTACAGTGTCTGGCTGCACATTGTAACTGTC | + |
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Preference number: 6 (lower is better) Translates to: PGIAEYAPKVPD*GYSVWLHIVTV Trigger: GACAGTTACAATGTGCAGCCAGACACTGTAGCCCCAATCTGGAACCTTCGGGGCGTACTCAGCAATGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 72 bp | AGACCAGCACCACACCCAGGCCTAACAGGGTCCCCATaGCTTTCCATCTCCGAGTCCTTGAGTTATCATCAG | + |
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Preference number: 6 (lower is better) Translates to: RPAPHPGLTGSP*LSISESLSYHQ Trigger: CTGATGATAACTCAAGGACTCGGAGATGGAAAGTCATGGGGACCCTGTTAGGCCTGGGTGTGGTGCTGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CCA 72 bp | GAGCCAGAGGGATCGATGCTCCATAGGCAGTTCCAGTaGGGTCTGAATCCAGTCCTTCAAAACAGACATGGG | + |
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Preference number: 6 (lower is better) Translates to: EPEGSMLHRQFQ*GLNPVLQNRHG Trigger: CCCATGTCTGTTTTGAAGGACTGGATTCAGACCCCACTGGAACTGCCTATGGAGCATCGATCCCTCTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 72 bp | GTGAGAACGCACATCCTCTTTAGAGTACATCCGTGGTaGCTCCTGAGAAGCCCTACACCGATGCTCATGGTA | + |
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Preference number: 6 (lower is better) Translates to: VRTHILFRVHPW*LLRSPTPMLMV Trigger: TACCATGAGCATCGGTGTAGGGCTTCTCAGGAGTCACCACGGATGTACTCTAAAGAGGATGTGCGTTCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 72 bp | ACCACTCCATGCATAGCCCTTGATAGTCACCTCGCCTaGCTCTACAATGGCCCCATCTTGAGGTTGTGTGAT | + |
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Preference number: 6 (lower is better) Translates to: TTPCIALDSHLA*LYNGPILRLCD Trigger: ATCACACAACCTCAAGATGGGGCCATTGTAGAGTCAGGCGAGGTGACTATCAAGGGCTATGCATGGAGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS TCA 72 bp | TTGATGGTCCTCCTGGATGCAGGTCCACAAATTTTGTaGCATCGAAGACCTCAGAGCCTAGAGTTACCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LMVLLDAGPQIL*HRRPQSLELPR Trigger: TCTGGGTAACTCTAGGCTCTGAGGTCTTCGATGTCACAAAATTTGTGGACCTGCATCCAGGAGGACCATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CCA 72 bp | TGCATTAAAGGGGCGCTGGCTATTAATCCTCAGGGCTaGATGACGAATAGGATCATCAGCATAAGGGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: CIKGALAINPQG*MTNRIISIRVR Trigger: TCTGACCCTTATGCTGATGATCCTATTCGTCATCCAGCCCTGAGGATTAATAGCCAGCGCCCCTTTAATGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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| CDS CAA 72 bp | TTACCAGCACACTGCAGAGTGACAGTGACCTCATGTTaGGGAAACTTATGCAAATCATCCAAGGACAGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LPAHCRVTVTSC*GNLCKSSKDRD Trigger: GTCTCTGTCCTTGGATGATTTGCATAAGTTTCCCAAACATGAGGTCACTGTCACTCTGCAGTGTGCTGGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054764.9 |
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