Pregenerated sensors for SUN5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027480Ensembl transcript IDs: ENSMUST00000028982.5
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GGTAGACTTTCTGGGCCAAACGGATGGTCACCTGGCCGCGGTCACTaGCAAAGGCCCAGCAGTTCCCAGGTGTCACGTTTGGCTCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GRLSGPNGWSPGRGH*QRPSSSQVSRLAQG Trigger: TCCTTGAGCCAAACGTGACACCTGGGAACTGCTGGGCCTTTGCCAGTGACCGCGGCCAGGTGACCATCCGTTTGGCCCAGAAAGTCTACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 90 bp | GATCCAGTTCCAGTAGGAGCGAGCCTTGTCGTGGTTATACGTGGCTaGCGTGTGCTCGAAGTCGATGCTGGCCCCTATGGACTTCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DPVPVGASLVVVIRG*RVLEVDAGPYGLQG Trigger: GCCCTGAAGTCCATAGGGGCCAGCATCGACTTCGAGCACACGTCAGCCACGTATAACCACGACAAGGCTCGCTCCTACTGGAACTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 90 bp | CCCCTAGGAACACTTCCTCCCTGGGTAGGCTCTCCAAGCCATAGATaGCAAAGTCCTTTGGTGCGGTGTCCAGGCTTCCCGACAACGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLGTLPPWVGSPSHR*QSPLVRCPGFPTTR Trigger: TCTCGTTGTCGGGAAGCCTGGACACCGCACCAAAGGACTTTGTCATCTATGGCTTGGAGAGCCTACCCAGGGAGGAAGTGTTCCTAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS GCA 90 bp | GGTGAAGCGAGGGTTCCCCCAGTTGCTGGAGATCTTCACCTTGACTaGAGCAAAGCTCCTGGGTGGCAGGTTCTGGAGCTGAAACGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GEARVPPVAGDLHLD*SKAPGWQVLELKRL Trigger: CAAACGTTTCAGCTCCAGAACCTGCCACCCAGGAGCTTTGCTGCAGTCAAGGTGAAGATCTCCAGCAACTGGGGGAACCCTCGCTTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 90 bp | GTCGGATCCAGTTCCAGTAGGAGCGAGCCTTGTCGTGGTTATACGTaGCTGACGTGTGCTCGAAGTCGATGCTGGCCCCTATGGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VGSSSSRSEPCRGYT*LTCARSRCWPLWTS Trigger: TGAAGTCCATAGGGGCCAGCATCGACTTCGAGCACACGTCAGCCACGTATAACCACGACAAGGCTCGCTCCTACTGGAACTGGATCCGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 90 bp | ATGAGCTGGTTCATGCTACCTCGTAGGTCCTGGATTTCCCCAGTGTaGTGTCGTACCTTCTCCTGGTACATCCTCAGGCTCTGCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: MSWFMLPRRSWISPV*CRTFSWYILRLCNG Trigger: TCCATTGCAGAGCCTGAGGATGTACCAGGAGAAGGTACGACATCACACTGGGGAAATCCAGGACCTACGAGGTAGCATGAACCAGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 90 bp | CAGCAAAGCTCCTGGGTGGCAGGTTCTGGAGCTGAAACGTTTGGATaGTGTTTTCTGGCTGAAACTGGAATGCCCCTAGGAACACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QQSSWVAGSGAETFG*CFLAETGMPLGTLP Trigger: AGGAAGTGTTCCTAGGGGCATTCCAGTTTCAGCCAGAAAACATCATCCAAACGTTTCAGCTCCAGAACCTGCCACCCAGGAGCTTTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 72 bp | GCTGGGTCTGAGTCCTCAGGAAGCAGGCTAGGTAGGTaGGCCAGGTCATGTTTGCCGGGGCTGGCTCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AGSESSGSRLGR*ARSCLPGLALP Trigger: TGGCAGAGCCAGCCCCGGCAAACATGACCTGGCTCACCTACCTAGCCTGCTTCCTGAGGACTCAGACCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 72 bp | TCTGGGCCAAACGGATGGTCACCTGGCCGCGGTCACTaGCAAAGGCCCAGCAGTTCCCAGGTGTCACGTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SGPNGWSPGRGH*QRPSSSQVSRL Trigger: CAAACGTGACACCTGGGAACTGCTGGGCCTTTGCCAGTGACCGCGGCCAGGTGACCATCCGTTTGGCCCAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 90 bp | TGCACACGCACACGGTACATGCAGGTGAAGCGAGGGTTCCCCCAGTaGCTGGAGATCTTCACCTTGACTGCAGCAAAGCTCCTGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: CTRTRYMQVKRGFPQ*LEIFTLTAAKLLGG Trigger: GCCACCCAGGAGCTTTGCTGCAGTCAAGGTGAAGATCTCCAGCAACTGGGGGAACCCTCGCTTCACCTGCATGTACCGTGTGCGTGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 72 bp | CCAGTAGGAGCGAGCCTTGTCGTGGTTATACGTGGCTaGCGTGTGCTCGAAGTCGATGCTGGCCCCTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVGASLVVVIRG*RVLEVDAGPYG Trigger: TCCATAGGGGCCAGCATCGACTTCGAGCACACGTCAGCCACGTATAACCACGACAAGGCTCGCTCCTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS GCA 72 bp | GAGCGAGCCTTGTCGTGGTTATACGTGGCTGACGTGTaGTCGAAGTCGATGCTGGCCCCTATGGACTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: ERALSWLYVADV*SKSMLAPMDFR Trigger: CCTGAAGTCCATAGGGGCCAGCATCGACTTCGAGCACACGTCAGCCACGTATAACCACGACAAGGCTCGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS GCA 72 bp | AGGGTTCCCCCAGTTGCTGGAGATCTTCACCTTGACTaGAGCAAAGCTCCTGGGTGGCAGGTTCTGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RVPPVAGDLHLD*SKAPGWQVLEL Trigger: CAGCTCCAGAACCTGCCACCCAGGAGCTTTGCTGCAGTCAAGGTGAAGATCTCCAGCAACTGGGGGAACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS GCA 72 bp | TCTAGGTGTGAGTCTTTGGGAGGGGTTACAGAGCCGTaGACACGCACACGGTACATGCAGGTGAAGCGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SRCESLGGVTEP*TRTRYMQVKRG Trigger: CCCTCGCTTCACCTGCATGTACCGTGTGCGTGTGCACGGCTCTGTAACCCCTCCCAAAGACTCACACCTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 72 bp | CGGGGCTGGCTCTGCCATTCTGCTGATATAGCTTCTTaGGACGCCCCTCCTAGGCCTGCCACTGTGAGTTGT | + |
|
Preference number: 6 (lower is better) Translates to: RGWLCHSADIAS*DAPPRPATVSC Trigger: ACAACTCACAGTGGCAGGCCTAGGAGGGGCGTCCAAAGAAGCTATATCAGCAGAATGGCAGAGCCAGCCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 90 bp | CATGTTTGCCGGGGCTGGCTCTGCCATTCTGCTGATATAGCTTCTTaGGACGCCCCTCCTAGGCCTGCCACTGTGAGTTGTGTCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: HVCRGWLCHSADIAS*DAPPRPATVSCVFR Trigger: CCTGAAGACACAACTCACAGTGGCAGGCCTAGGAGGGGCGTCCAAAGAAGCTATATCAGCAGAATGGCAGAGCCAGCCCCGGCAAACATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 72 bp | ACACTTCCTCCCTGGGTAGGCTCTCCAAGCCATAGATaGCAAAGTCCTTTGGTGCGGTGTCCAGGCTTCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TLPPWVGSPSHR*QSPLVRCPGFP Trigger: CGGGAAGCCTGGACACCGCACCAAAGGACTTTGTCATCTATGGCTTGGAGAGCCTACCCAGGGAGGAAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 72 bp | AGTTCCAGTAGGAGCGAGCCTTGTCGTGGTTATACGTaGCTGACGTGTGCTCGAAGTCGATGCTGGCCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSEPCRGYT*LTCARSRCWPL Trigger: TAGGGGCCAGCATCGACTTCGAGCACACGTCAGCCACGTATAACCACGACAAGGCTCGCTCCTACTGGAACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 72 bp | ACACGGTACATGCAGGTGAAGCGAGGGTTCCCCCAGTaGCTGGAGATCTTCACCTTGACTGCAGCAAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TRYMQVKRGFPQ*LEIFTLTAAKL Trigger: GAGCTTTGCTGCAGTCAAGGTGAAGATCTCCAGCAACTGGGGGAACCCTCGCTTCACCTGCATGTACCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 72 bp | TCCTGGGTGGCAGGTTCTGGAGCTGAAACGTTTGGATaGTGTTTTCTGGCTGAAACTGGAATGCCCCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SWVAGSGAETFG*CFLAETGMPLG Trigger: TCCTAGGGGCATTCCAGTTTCAGCCAGAAAACATCATCCAAACGTTTCAGCTCCAGAACCTGCCACCCAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 72 bp | TCGTACCTTCTCCTGGTACATCCTCAGGCTCTGCAATaGACCATTTATGCTGTCATCCTGCCAGACTTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SYLLLVHPQALQ*TIYAVILPDFH Trigger: GTGGAAGTCTGGCAGGATGACAGCATAAATGGTCCATTGCAGAGCCTGAGGATGTACCAGGAGAAGGTACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 72 bp | AAAGCTCCTGGGTGGCAGGTTCTGGAGCTGAAACGTTaGGATGATGTTTTCTGGCTGAAACTGGAATGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KAPGWQVLELKR*DDVFWLKLECP Trigger: GGGGCATTCCAGTTTCAGCCAGAAAACATCATCCAAACGTTTCAGCTCCAGAACCTGCCACCCAGGAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS TCA 72 bp | CAAAAACACAGAGGACCAGAAGGCCCATCTTTTCCATaGCTTTCTGGCAGAACAACTTGCATCTGCAGGTGT | + |
|
Preference number: 6 (lower is better) Translates to: QKHRGPEGPSFP*LSGRTTCICRC Trigger: ACACCTGCAGATGCAAGTTGTTCTGCCAGAAAGTCATGGAAAAGATGGGCCTTCTGGTCCTCTGTGTTTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 72 bp | CAGAGGACCAGAAGGCCCATCTTTTCCATGACTTTCTaGCAGAACAACTTGCATCTGCAGGTGTTAAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: QRTRRPIFSMTF*QNNLHLQVLRK Trigger: TTTCCTTAACACCTGCAGATGCAAGTTGTTCTGCCAGAAAGTCATGGAAAAGATGGGCCTTCTGGTCCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 72 bp | TTTTGCTCATCAGATATGGCTTCCATCTTCTGGAGTTaGGCAATGAGCTGGTTCATGCTACCTCGTAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FCSSDMASIFWS*AMSWFMLPRRS Trigger: GGACCTACGAGGTAGCATGAACCAGCTCATTGCCAAACTCCAGAAGATGGAAGCCATATCTGATGAGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CCA 72 bp | GTCGATGCTGGCCCCTATGGACTTCAGGGCAAAGTCTaGCTTTTCAATGTAATCACCTTGAATCATCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: VDAGPYGLQGKV*LFNVITLNHLH Trigger: ATGAAGATGATTCAAGGTGATTACATTGAAAAGCCAGACTTTGCCCTGAAGTCCATAGGGGCCAGCATCGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||
| CDS CAA 72 bp | GACCATTTATGCTGTCATCCTGCCAGACTTCCACTTTaGATGGTAAGTGCATGGAAAACATCCAGAAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: DHLCCHPARLPL*MVSAWKTSRSQ Trigger: TTGGCTTCTGGATGTTTTCCATGCACTTACCATCAAAAGTGGAAGTCTGGCAGGATGACAGCATAAATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028982.5 |
||