Pregenerated sensors for SUN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042524Ensembl transcript IDs: ENSMUST00000046259.14, ENSMUST00000089311.11, ENSMUST00000100439.10, ENSMUST00000159660.2, ENSMUST00000162499.2
Found 322 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTaGAAGTCAGCGCTAAGAAGCATGTGCAGGCAGCGGTGGGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: GLCREFYVLPLHSCS*KSALRSMCRQRWGA Trigger: AGCACCCCACCGCTGCCTGCACATGCTTCTTAGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 90 bp | CATGCTGGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTaGCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTGTCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HAGRAQQPRCPLPGT*QGQSQLHSAKHCPK Trigger: TTTAGGACAGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCCAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 90 bp | AGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATaGAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RGKTKRGIGAWWLGL*REFYVLPLHSCSWK Trigger: CTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCGGCATAGGAGCCTGGTaGCTTGGCTTATGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCGIGAW*LGLCRE Trigger: CTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCC...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGTGGTACCCTCCATGCTaGAAGAGCTCAGCAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: GTQELVSSRLLGTPGSYGWYPPC*KSSAAS Trigger: CGAGGCTGCTGAGCTCTTCCAGCATGGAGGGTACCA...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CAA 90 bp | TTGCCATTTCACCCGAACACTAACCGGGCTGCCTTGCAGCTCCTCTaGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LPFHPNTNRAALQLL*APSIEQAGPSPSRA Trigger: GGCTCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAAGGCAGCCCGGTTAGTGTTCGGGTGAAATGGCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTACCTTTACCAGGCACTTaGCAGGGACAGTCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: GAGFLPFARNPRLLRAMVPLPGT*QGQSQL Trigger: CAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGG...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTACCCCCAGCTTATCCCTaGGGCTCTGGCTTGGTATGC | + |
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Preference number: 2 (lower is better) Translates to: LGVLYQALARDSPSCTVLPPAYP*GSGLVC Trigger: GCATACCAAGCCAGAGCCCCAGGGATAAGCTGGGGG...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCAGATGCTGGGAAAGATaGGCTTCCCACGTGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSRCWER*ASHVAS Trigger: GCTAGCCACGTGGGAAGCTCATCTTTCCCAGCATCT...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR TCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCCTCCACCTCACTTCTaGTCGCAGTCCCCCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSPPPHF*SQSPKV Trigger: TACTTTGGGGGACTGCGATCAGAAGTGAGGTGGAGG...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCCCTTTACCAGGCACTTaGCAGGGACAGTCCCAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSPLPGT*QGQSQL Trigger: CAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGG...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCGGCATAGGAGCCTGGTaGCTTGGCTTATGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSGIGAW*LGLCRE Trigger: CTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCC...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCTGGTACCCTCCATGCTaGAAGAGCTCAGCAGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSWYPPC*KSSAAS Trigger: CGAGGCTGCTGAGCTCTTCCAGCATGGAGGGTACCA...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGAGGGAGTTCTACGTGCTaGCTCTTCACTCTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRGSSTC*LFTLAP Trigger: AGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCC...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGGGAGTTCTACGTGCTaGCTCTTCACTCTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHGSSTC*LFTLAP Trigger: AGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCCTGGGGCTCTGGCTTaGTATGCCCATGGCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: LWLLALNQENPQSHLPTPPGALA*YAHGFG Trigger: GCCAAAGCCATGGGCATACCAAGCCAGAGCCCCAGG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CAA 90 bp | TTTGTGACAGGAGAGCACAAAACAAGCCCGAGGGGGCTGTACAACTaGCCATTTCACCCGAACACTAACCGGGCTGCCTTGCAGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: FVTGEHKTSPRGLYN*PFHPNTNRAALQLL Trigger: GAGGAGCTGCAAGGCAGCCCGGTTAGTGTTCGGGTGAAATGGCAAGTTGTACAGCCCCCTCGGGCTTGTTTTGTGCTCTCCTGTCACAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTTGGTGGCTTGGCTTATaGAGGGAGTTCTACGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: VLYQALARDSPSCTVLSTWWLGL*REFYVL Trigger: CAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCA...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCAGAGCCCAAGAGAGTTaGTGTAGAGTAGACAGGACC | + |
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Preference number: 2 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSRAQES*CRVDRT Trigger: GGTCCTGTCTACTCTACAGCAACTCTCTTGGGCTCT...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGAGGCATAGGAGCCTGGTaGCTTGGCTTATGCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SPKVCYIYTPGRRLALGGGIGAW*LGLCRE Trigger: CTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCC...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACCTCCACCTCACTTCTaGTCGCAGTCCCCCAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIPPPHF*SQSPKV Trigger: TACTTTGGGGGACTGCGATCAGAAGTGAGGTGGAGG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGATGGTGGCTTGGCTTATaGAGGGAGTTCTACGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRWWLGL*REFYVL Trigger: CAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCA...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR TCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAAGATGCTGGGAAAGATaGGCTTCCCACGTGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: YNTAGPAVESKSLFLLSTRCWER*ASHVAS Trigger: GCTAGCCACGTGGGAAGCTCATCTTTCCCAGCATCT...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR TCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTAGATGCTGGGAAAGATaGGCTTCCCACGTGGCTAGC | + |
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Preference number: 2 (lower is better) Translates to: LSHTVAIGTESGEPPKSSRCWER*ASHVAS Trigger: GCTAGCCACGTGGGAAGCTCATCTTTCCCAGCATCT...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCAGTCCCCCAAAGTATaGTACATATATACACCTGGT | + |
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Preference number: 2 (lower is better) Translates to: LWLLALNQENPQSHLPTPQSPKV*YIYTPG Trigger: ACCAGGTGTATATATGTAGCATACTTTGGGGGACTG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | GGAACCCCAGGCTCCTACGGGCCATGGTACCCTCCATaGTGGAAGAGCTCAGCAGCCTCGGTGTCCTTTACC | + |
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Preference number: 3 (lower is better) Translates to: GTPGSYGPWYPP*WKSSAASVSFT Trigger: GGTAAAGGACACCGAGGCTGCTGAGCTCTTCCAGCATGGAGGGTACCATGGCCCGTAGGAGCCTGGGGTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | ACCCCAGGCTCCTACGGGCCATGGTACCCTCCATGCTaGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGG | + |
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Preference number: 3 (lower is better) Translates to: TPGSYGPWYPPC*KSSAASVSFTR Trigger: CCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCCAGCATGGAGGGTACCATGGCCCGTAGGAGCCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | TCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATaGTACCCTCCATGCTGGAAGAGCTCAGCAGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: SRLLGTPGSYGP*YPPCWKSSAAS Trigger: CGAGGCTGCTGAGCTCTTCCAGCATGGAGGGTACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGTCCTTTACCAGGCACTaGCCAGGGACAGTCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GTQELVSSRLLGTPGSYGSFTRH*PGTVPA Trigger: AGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGA...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTATCCTTTACCAGGCACTaGCCAGGGACAGTCCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: GAGFLPFARNPRLLRAMVSFTRH*PGTVPA Trigger: AGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGA...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | AGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTaGCAGGGACAGTCCCAGCTGCACAGTGCTAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: RAQQPRCPLPGT*QGQSQLHSAKH Trigger: GTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | CCAGCTTATCCCTGGGGCTCTGGCTTGGTATGCCCATaGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: PAYPWGSGLVCP*LWHLPGVNRCQ Trigger: CTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATACCAAGCCAGAGCCCCAGGGATAAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTGCTGCCTCTTCACTCTaGCTCCTGGAAGTCAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: VLYQALARDSPSCTVLSTAASSL*LLEVSA Trigger: AGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGC...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCCCTGGGGCTCTGGCTaGGTATGCCCATGGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LWLLALNQENPQSHLPTPPWGSG*VCPWLW Trigger: CCAAAGCCATGGGCATACCAAGCCAGAGCCCCAGGG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | GAGCCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTaGTGCCTCTTCACTCTTGCTCCTGGAAGTCAGCGC | + |
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Preference number: 3 (lower is better) Translates to: EPGGLAYAGSST*CLFTLAPGSQR Trigger: GCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | CACTCTTGCTCCTGGAAGTCAGCGCTAAGAAGCATGTaGAGGCAGCGGTGGGGTGCTGGGCACCTATTTTCA | + |
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Preference number: 3 (lower is better) Translates to: HSCSWKSALRSM*RQRWGAGHLFS Trigger: TGAAAATAGGTGCCCAGCACCCCACCGCTGCCTGCACATGCTTCTTAGCGCTGACTTCCAGGAGCAAGAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCTGGGGCTCTGGCTaGGTATGCCCATGGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: LSHTVAIGTESGEPPKSSPWGSG*VCPWLW Trigger: CCAAAGCCATGGGCATACCAAGCCAGAGCCCCAGGG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTaGACAGTGCTAAGCACTGTCCTAAAGGCCACAAGA | + |
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Preference number: 3 (lower is better) Translates to: VLYQALARDSPS*TVLSTVLKATR Trigger: TCTTGTGGCCTTTAGGACAGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTaGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: SRGKTKRGIGAW*LGLCREFYVLP Trigger: AGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | AGCTCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTaGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTG | + |
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Preference number: 3 (lower is better) Translates to: SSRGKTKRGIGA*WLGLCREFYVL Trigger: CAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR-3UTR CAA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAGCTGCCTCTTCACTCTaGCTCCTGGAAGTCAGCGCT | + |
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Preference number: 3 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIAASSL*LLEVSA Trigger: AGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGC...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR GCA 72 bp | ACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATaGAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGC | + |
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Preference number: 3 (lower is better) Translates to: TKRGIGAWWLGL*REFYVLPLHSC Trigger: GCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CCA 72 bp | AAAAGCAGTGGTCCCAGCACTGGGAATCTCTTAGGTTaGCACAGACAACAGTCGTCAGAGGCACACAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KSSGPSTGNLLG*HRQQSSEAHRS Trigger: GCTCCTGTGTGCCTCTGACGACTGTTGTCTGTGCCAACCTAAGAGATTCCCAGTGCTGGGACCACTGCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR-3UTR CAA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGCTGCCTCTTCACTCTaGCTCCTGGAAGTCAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: YNTAGPAVESKSLFLLSTAASSL*LLEVSA Trigger: AGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR TCA 72 bp | CACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATaGGCTTCCCACGTGGCTAGCAACAGGCCCAAGATC | + |
|
Preference number: 3 (lower is better) Translates to: HLFSEQGRCWER*ASHVASNRPKI Trigger: GATCTTGGGCCTGTTGCTAGCCACGTGGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR GCA 72 bp | TTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTaGTCCTGGAAGTCAGCGCTAAGAAGCATGTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LCREFYVLPLHS*SWKSALRSMCR Trigger: CCTGCACATGCTTCTTAGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR TCA 72 bp | TACCTGTATCTTGAGCCACACTGTGGCTATTGGCACTaGATCAGGAGAACCCCCAAAGTCATCTCCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: YLYLEPHCGYWH*IRRTPKVISPL Trigger: GAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAAGATACAGGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCTGGCCAGCAGCCCCCTaGCGCAGCTCCAGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSWPAAP*RSSRRS Trigger: GGAACGCCTGGAGCTGCGGCAGGGGGCTGCTGGCCA...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCGCTGCAGGGCCTGCTTaGCGATCCGGTGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCAAGPA*RSGAPA Trigger: AGCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGC...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGATGGCCAGCAGCCCCCTaGCGCAGCTCCAGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRWPAAP*RSSRRS Trigger: GGAACGCCTGGAGCTGCGGCAGGGGGCTGCTGGCCA...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR CAA 72 bp | CACCCGAACACTAACCGGGCTGCCTTGCAGCTCCTCTaGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HPNTNRAALQLL*APSIEQAGPSP Trigger: GGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAAGGCAGCCCGGTTAGTGTTCGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCGCCGCTCCAGAGAGTaGACCCGGGAGAGAACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHRRSRE*TRERTR Trigger: GCGCGTTCTCTCCCGGGTTCACTCTCTGGAGCGGCG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCGCTGCAGGGCCTGCTTaGCGATCCGGTGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSAAGPA*RSGAPA Trigger: AGCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGC...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCACGCGCTGCTCAGCCTaGAAGTGCTGGGAGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCTRCSA*KCWEAS Trigger: AGACGCCTCCCAGCACTTCCAGGCTGAGCAGCGCGT...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCCTACTGCCTCCTCCATaGCCAGCAGCCCCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSLLPPP*PAAPCR Trigger: GCGGCAGGGGGCTGCTGGCCATGGAGGAGGCAGTAG...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTACTACTGCCTCCTCCATaGCCAGCAGCCCCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLLLPPP*PAAPCR Trigger: GCGGCAGGGGGCTGCTGGCCATGGAGGAGGCAGTAG...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAACCACTGCAAAGCCCTaGGGCCCCTGGAAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVTTAKP*GPWKAQ Trigger: CTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGT...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCGGGAGAGAACGCGCTaGTCAGCCTGGAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSRERTR*SAWKCW Trigger: CCAGCACTTCCAGGCTGAGCAGCGCGTTCTCTCCCG...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGATGGCCAGCAGCCCCCTaGCGCAGCTCCAGGCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGWPAAP*RSSRRS Trigger: GGAACGCCTGGAGCTGCGGCAGGGGGCTGCTGGCCA...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGGAGCCACTGTGTCCCTaGGCAAGTCCTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTQELVSSRLLGTPGSYGEPLCP*ASPPSG Trigger: CCCTGAAGGAGGACTTGCGCAGGGACACAGTGGCTC...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGAGGGCAGCCAGCTCCTaGCGCAGGCTGGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRRAASS*RRLASW Trigger: CCAGCTGGCCAGCCTGCGGCAGGAGCTGGCTGCCCT...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGTGCATCTCATCTCTCTaGAGGAGCCCGCTGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTQELVSSRLLGTPGSYGCISSL*RSPLRA Trigger: TGCGCGCAGCGGGCTCCTGCAGAGAGATGAGATGCA...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCATGACCCGAGGTGACTaGGAGTGGTACCACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCMTRGD*EWYHRG Trigger: CCCCCTGTGGTACCACTCCCAGTCACCTCGGGTCAT...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAGGCCCAGCAGTTGCCTaGGTGCACATCTGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVGPAVA*VHIWLQ Trigger: CTGCAGCCAGATGTGCACCCAGGCAACTGCTGGGCC...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCCTGAGAGTAGCGAGTaGGGCGCTGGCTTCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHPESSE*GAGFVS Trigger: CGAGACGAAGCCAGCGCCTCACTCGCTACTCTCAGG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACCTGAGAGTAGCGAGTaGGGCGCTGGCTTCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRPESSE*GAGFVS Trigger: CGAGACGAAGCCAGCGCCTCACTCGCTACTCTCAGG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTCCAGCTCCTGCAGCTaGGCGTGCATCTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCSSSCS*ACISSL Trigger: GAGAGATGAGATGCACGCTCAGCTGCAGGAGCTGGA...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCDSAVG*QGLGHV Trigger: CACGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCCCTCTGGCTGCTTCCTaGTCTCTTTTGCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCPLAAS*SLLLPT Trigger: GGTGGGCAGCAAAAGAGAGCAGGAAGCAGCCAGAGG...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCGAGCCACTGTGTCCCTaGGCAAGTCCTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSEPLCP*ASPPSG Trigger: CCCTGAAGGAGGACTTGCGCAGGGACACAGTGGCTC...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGTCTGCCACCGAGTTCTaGTTCAGAGTCAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTQELVSSRLLGTPGSYGSATEF*FRVRAA Trigger: GGCTGCCCTGACTCTGAAGCAGAACTCGGTGGCAGA...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGGGGTGCACATCTGGCTaGAGAATGACCCGAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTQELVSSRLLGTPGSYGGCTSG*RMTRGD Trigger: GTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCC...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAGCTGGGAGGCGTCTCTaGATTCCCACACCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVAGRRL*IPTPLA Trigger: AGCCAGAGGTGTGGGAATCCAGAGACGCCTCCCAGC...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGCTACTGCCTCCTCCATaGCCAGCAGCCCCCTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRLLPPP*PAAPCR Trigger: GCGGCAGGGGGCTGCTGGCCATGGAGGAGGCAGTAG...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAACGCTGCGGCCTCCCTaGCTGACTTGCCCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLTLRPP*LTCPAS Trigger: AGATGCAGGGCAAGTCAGCCAGGGAGGCCGCAGCGT...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTACCACTGCAAAGCCCTaGGGCCCCTGGAAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTTTAKP*GPWKAQ Trigger: CTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGT...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCGAGCTGTGCTGGTCTaGGTCCGTGTAGCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHRAVLV*VRVACK Trigger: CTTGCAGGCTACACGGACTCAGACCAGCACAGCTCG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCGCCGCTCCAGAGAGTaGACCCGGGAGAGAACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPRRSRE*TRERTR Trigger: GCGCGTTCTCTCCCGGGTTCACTCTCTGGAGCGGCG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAGGATGCCAAAGAGGCTaGGGAGTGCCGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVGCQRG*GVPSWS Trigger: AGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCC...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGACGGAGCTCGCACCACTaGTGCTGCTGCCGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGRSSHH*CCCRHR Trigger: ACGATGGCGGCAGCAGCAGCAGTGGTGCGAGCTCCG...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCCTTCCTGCTCTCTTTTaGTGCCCACCAGGAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCLPALF*CPPGDH Trigger: GTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGGAAG...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCCTCTGGCTGCTTCCTaGTCTCTTTTGCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSPLAAS*SLLLPT Trigger: GGTGGGCAGCAAAAGAGAGCAGGAAGCAGCCAGAGG...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAGAGCCACTGTGTCCCTaGGCAAGTCCTCCTTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLEPLCP*ASPPSG Trigger: CCCTGAAGGAGGACTTGCGCAGGGACACAGTGGCTC...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTAGGGCAGCCAGCTCCTaGCGCAGGCTGGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSRAASS*RRLASW Trigger: CCAGCTGGCCAGCCTGCGGCAGGAGCTGGCTGCCCT...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHGRPSS*LGAHLA Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGTCAGGCGGTACCAGGTaGTGCCAATCCACCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTQELVSSRLLGTPGSYGSGGTR*CQSTSR Trigger: TCTACTGGTGGATTGGCACCACCTGGTACCGCCTGA...CCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGGCGTTCCAGCCGTATaGCCTCCTTCTGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHGVPAV*PPSASW Trigger: CCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCGAGGTGACTGGGAGTaGTACCACAGGGGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHRGDWE*YHRGMP Trigger: TGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCGGGCTTCGGACTCCTaGGAGGCCTGGACGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLARASDS*EAWTIF Trigger: GAAGATCGTCCAGGCCTCTCAGGAGTCCGAAGCCCG...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGCTGCAGGGCCTGCTTaGCGATCCGGTGCACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPAAGPA*RSGAPA Trigger: AGCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGAGGATGCCAAAGAGGCTaGGGAGTGCCGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRGCQRG*GVPSWS Trigger: AGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCC...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCCAGAATGACCCGAGGTaGCTGGGAGTGGTACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSQNDPR*LGVVPQ Trigger: CTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTG...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSDSAVG*QGLGHV Trigger: CACGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCGGAGCTGGGGACAGGTaGTTCATGTTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASVSFTRHLPGTVPAAQCGAGDR*FMLLDF Trigger: GAAATCCAGCAACATGAAGCACCTGTCCCCAGCTCC...GCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCCTGCTCTCTTTTGCTaGCCACCAGGAGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHPALFC*PPGDHS Trigger: GCTGTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACCTCTGGCTGCTTCCTaGTCTCTTTTGCTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRPLAAS*SLLLPT Trigger: GGTGGGCAGCAAAAGAGAGCAGGAAGCAGCCAGAGG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTATGCTCAGCCTGGAAGTaGTGGGAGGCGTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLCSAWK*WEASLD Trigger: ATCCAGAGACGCCTCCCAGCACTTCCAGGCTGAGCA...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACTGCTCAGCCTGGAAGTaGTGGGAGGCGTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHCSAWK*WEASLD Trigger: ATCCAGAGACGCCTCCCAGCACTTCCAGGCTGAGCA...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTCATGGCTCAGGCTACTaGCTCCTCCATGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTHGSGY*LLHGQQ Trigger: CTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATG...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAAGGGCAGCCAGCTCCTaGCGCAGGCTGGCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTRAASS*RRLASW Trigger: CCAGCTGGCCAGCCTGCGGCAGGAGCTGGCTGCCCT...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACTCTGCCACCGAGTTCTaGTTCAGAGTCAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHSATEF*FRVRAA Trigger: GGCTGCCCTGACTCTGAAGCAGAACTCGGTGGCAGA...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTACGCGCTGCTCAGCCTaGAAGTGCTGGGAGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLATRCSA*KCWEAS Trigger: AGACGCCTCCCAGCACTTCCAGGCTGAGCAGCGCGT...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAGACAGGGCATCTTCATaGCTCAGGCTACTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVDRASS*LRLLPP Trigger: AGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTC...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTACGCTGCGGCCTCCCTaGCTGACTTGCCCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLATLRPP*LTCPAS Trigger: AGATGCAGGGCAAGTCAGCCAGGGAGGCCGCAGCGT...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTCGAGGTGACTGGGAGTaGTACCACAGGGGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTRGDWE*YHRGMP Trigger: TGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCG...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACTCCGAAAAAGTCTTCTaGGGCCTTGCTCTCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHSEKVF*GLALRG Trigger: ACCGCGGAGAGCAAGGCCTCAGAAGACTTTTTCGGA...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACCGCCGCTCCAGAGAGTaGACCCGGGAGAGAACGCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDRRSRE*TRERTR Trigger: GCGCGTTCTCTCCCGGGTTCACTCTCTGGAGCGGCG...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCTCTTCCGAGTCTTGGTaGTGCTCTGCCCTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSSSESW*CSALRV Trigger: TACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGA...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCGGGCTTCGGACTCCTaGGAGGCCTGGACGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPRASDS*EAWTIF Trigger: GAAGATCGTCCAGGCCTCTCAGGAGTCCGAAGCCCG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTACAAGAAGGAACTGCCTaGTCCAGTCAGGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLQEGTA*SSQGTG Trigger: CCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTG...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTGATAGTGCTGTTGGGTaGCAAGGCCTTGGGCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTDSAVG*QGLGHV Trigger: CACGTGCCCAAGGCCTTGTCACCCAACAGCACTATC...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACAGGTTCAGCGAGAAGTaGCTGGACCTGGTTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHRFSEK*LDLVRT Trigger: CGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCT...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
||
| CDS-3UTR GCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGAGACCACAGCGGGTTaGAATGTCTGCAGCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHETTAG*NVCSPK Trigger: CTTAGGGCTGCAGACATTGCAACCCGCTGTGGTCTC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTCCTGCTCTCTTTTGCTaGCCACCAGGAGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTPALFC*PPGDHS Trigger: GCTGTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGG...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCCGGGAGAGAACGCGCTaGTCAGCCTGGAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPRERTR*SAWKCW Trigger: CCAGCACTTCCAGGCTGAGCAGCGCGTTCTCTCCCG...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTTGCATCTCATCTCTCTaGAGGAGCCCGCTGCGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLACISSL*RSPLRA Trigger: TGCGCGCAGCGGGCTCCTGCAGAGAGATGAGATGCA...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLAGRPSS*LGAHLA Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGACAGGGCATCTTCATaGCTCAGGCTACTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHDRASS*LRLLPP Trigger: AGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCATTCCACATCAGCCCTaGCAGCCTGGATCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSIPHQP*QPGSSV Trigger: CACAGAAGATCCAGGCTGCCAGGGCTGATGTGGAAT...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGGCCTGGGTGCACATCTaGCTGCAGAATGACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRAWVHI*LQNDPR Trigger: CCTCGGGTCATTCTGCAGCCAGATGTGCACCCAGGC...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGCTCAGCAGCCTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCATCGAAGCCAAAGATaGCGAAGTCCTTGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRAQQPRCPLPGTCQGQSHRSQR*RSPWEH Trigger: GTGCTCCCAAGGACTTCGCCATCTTTGGCTTCGATG...GGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAGGCTGCTGAGCTCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTCCTGAGAGTAGCGAGTaGGGCGCTGGCTTCGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSPESSE*GAGFVS Trigger: CGAGACGAAGCCAGCGCCTCACTCGCTACTCTCAGG...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTCAAGAAGGAACTGCCTaGTCCAGTCAGGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTQEGTA*SSQGTG Trigger: CCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTG...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGATCCAGCTCCTGCAGCTaGGCGTGCATCTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGSSSCS*ACISSL Trigger: GAGAGATGAGATGCACGCTCAGCTGCAGGAGCTGGA...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAGGATGCCAAAGAGGCTaGGGAGTGCCGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGGCQRG*GVPSWS Trigger: AGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCC...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCGGAGCTCGCACCACTaGTGCTGCTGCCGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSRSSHH*CCCRHR Trigger: ACGATGGCGGCAGCAGCAGCAGTGGTGCGAGCTCCG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACACGGAGCTCGCACCACTaGTGCTGCTGCCGCCATCGT | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTRSSHH*CCCRHR Trigger: ACGATGGCGGCAGCAGCAGCAGTGGTGCGAGCTCCG...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAGGAGCTGGGGACAGGTaGTTCATGTTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLGAGDR*FMLLDF Trigger: GAAATCCAGCAACATGAAGCACCTGTCCCCAGCTCC...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACGGGAGAGAACGCGCTaGTCAGCCTGGAAGTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIRERTR*SAWKCW Trigger: CCAGCACTTCCAGGCTGAGCAGCGCGTTCTCTCCCG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCATGGCTCAGGCTACTaGCTCCTCCATGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPHGSGY*LLHGQQ Trigger: CTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCCATGGCTCAGGCTACTaGCTCCTCCATGGCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPHGSGY*LLHGQQ Trigger: CTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATG...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTTCTGCCACCGAGTTCTaGTTCAGAGTCAGGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLASATEF*FRVRAA Trigger: GGCTGCCCTGACTCTGAAGCAGAACTCGGTGGCAGA...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTGGGTGCACATCTGGCTaGAGAATGACCCGAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLAGCTSG*RMTRGD Trigger: GTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCC...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAAGAAGTGTCCCTTCCTaGTGCAGGTCTTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVRSVPS*CRSSSK Trigger: CTTCGATGAAGACCTGCAGCAGGAAGGGACACTTCT...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCGGATTCCCACACCTCTaGCTGCTTCCTGCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSGFPHL*LLPALF Trigger: AAAGAGAGCAGGAAGCAGCCAGAGGTGTGGGAATCC...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTGCTGGGAGGCGTCTCTaGATTCCCACACCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPAGRRL*IPTPLA Trigger: AGCCAGAGGTGTGGGAATCCAGAGACGCCTCCCAGC...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGGCGTTCCAGCCGTATaGCCTCCTTCTGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPGVPAV*PPSASW Trigger: CCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTTCTGTCTTCAGCTGCTaGACTCGGGCTTCGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLASVFSC*TRASDS Trigger: GGAGTCCGAAGCCCGAGTCCAGCAGCTGAAGACAGA...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGAACGCTGCGGCCTCCCTaGCTGACTTGCCCTGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKVCYIYTPGRRLALGGTLRPP*LTCPAS Trigger: AGATGCAGGGCAAGTCAGCCAGGGAGGCCGCAGCGT...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGCCTGGGTGCACATCTaGCTGCAGAATGACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPAWVHI*LQNDPR Trigger: CCTCGGGTCATTCTGCAGCCAGATGTGCACCCAGGC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTACCACTGCAAAGCCCTaGGGCCCCTGGAAGGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSTTAKP*GPWKAQ Trigger: CTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGT...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGATCCGAAAAAGTCTTCTaGGGCCTTGCTCTCCGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGSEKVF*GLALRG Trigger: ACCGCGGAGAGCAAGGCCTCAGAAGACTTTTTCGGA...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACGAGCTGTGCTGGTCTaGGTCCGTGTAGCCTGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIRAVLV*VRVACK Trigger: CTTGCAGGCTACACGGACTCAGACCAGCACAGCTCG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGATCTTCCGAGTCTTGGTaGTGCTCTGCCCTCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGSSESW*CSALRV Trigger: TACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGA...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCGGGCTTCGGACTCCTaGGAGGCCTGGACGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSRASDS*EAWTIF Trigger: GAAGATCGTCCAGGCCTCTCAGGAGTCCGAAGCCCG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGCAAGAAGGAACTGCCTaGTCCAGTCAGGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRQEGTA*SSQGTG Trigger: CCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTG...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGACAGAATGACCCGAGGTaGCTGGGAGTGGTACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRQNDPR*LGVVPQ Trigger: CTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTG...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTTGCTCAGCCTGGAAGTaGTGGGAGGCGTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPCSAWK*WEASLD Trigger: ATCCAGAGACGCCTCCCAGCACTTCCAGGCTGAGCA...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCCGTATGGCCTCCTTCTaGCAGTTGGAGGAAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSRMASF*QLEEKS Trigger: AGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACG...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCCCTCCCTGGCTGACTTaGCCTGCATCTCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPPPWLT*PASQPS Trigger: AGATGGCTGAGATGCAGGGCAAGTCAGCCAGGGAGG...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGACCTCCCTGGCTGACTTaGCCTGCATCTCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRPPWLT*PASQPS Trigger: AGATGGCTGAGATGCAGGGCAAGTCAGCCAGGGAGG...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTGGGTGCACATCTGGCTaGAGAATGACCCGAGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPGCTSG*RMTRGD Trigger: GTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCC...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGAAGAAGTGTCCCTTCCTaGTGCAGGTCTTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRRSVPS*CRSSSK Trigger: CTTCGATGAAGACCTGCAGCAGGAAGGGACACTTCT...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTTCAGGCGGTACCAGGTaGTGCCAATCCACCAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLASGGTR*CQSTSR Trigger: TCTACTGGTGGATTGGCACCACCTGGTACCGCCTGA...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAACGCGCTGCTCAGCCTaGAAGTGCTGGGAGGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTTRCSA*KCWEAS Trigger: AGACGCCTCCCAGCACTTCCAGGCTGAGCAGCGCGT...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTGGCGTTCCAGCCGTATaGCCTCCTTCTGCCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSGVPAV*PPSASW Trigger: CCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCC...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTCGAGGTGACTGGGAGTaGTACCACAGGGGGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSRGDWE*YHRGMP Trigger: TGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCG...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAATGACCCGAGGTGACTaGGAGTGGTACCACAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIMTRGD*EWYHRG Trigger: CCCCCTGTGGTACCACTCCCAGTCACCTCGGGTCAT...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAGCCTGGGTGCACATCTaGCTGCAGAATGACCCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIAWVHI*LQNDPR Trigger: CCTCGGGTCATTCTGCAGCCAGATGTGCACCCAGGC...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTGGCCCAGCAGTTGCCTaGGTGCACATCTGGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSGPAVA*VHIWLQ Trigger: CTGCAGCCAGATGTGCACCCAGGCAACTGCTGGGCC...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACCTGGACGATCTTCTTaGAGAGATCTTCCGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRPGRSS*RDLPSL Trigger: AAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGACAGAATGACCCGAGGTaGCTGGGAGTGGTACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SPKVCYIYTPGRRLALGGQNDPR*LGVVPQ Trigger: CTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTG...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTAGGTTCAGCGAGAAGTaGCTGGACCTGGTTAGGACG | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPRFSEK*LDLVRT Trigger: CGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCT...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
||
| CDS-3UTR GCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGACCTGCTCTCTTTTGCTaGCCACCAGGAGACCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPKVCYIYTPGRRLALGGPALFC*PPGDHS Trigger: GCTGTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGG...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTTCCTGCTCTCTTTTaGTGCCCACCAGGAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPLPALF*CPPGDH Trigger: GTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGGAAG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGACAGGCCCACTTCATCTaGCACCGAGTTCTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRQAHFI*HRVLLQ Trigger: CTGAAGCAGAACTCGGTGGCAGATGAAGTGGGCCTG...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCAGGCCCACTTCATCTaGCACCGAGTTCTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPQAHFI*HRVLLQ Trigger: CTGAAGCAGAACTCGGTGGCAGATGAAGTGGGCCTG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACGGAAGGCCCAGCAGTTaGCTGGGTGCACATCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDGRPSS*LGAHLA Trigger: AGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCC...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGAGTGTCCCTTCCTGCTaGAGGTCTTCATCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRSVPSC*RSSSKP Trigger: TGGCTTCGATGAAGACCTGCAGCAGGAAGGGACACT...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGCTGGGAGGCGTCTCTaGATTCCCACACCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTAGRRL*IPTPLA Trigger: AGCCAGAGGTGTGGGAATCCAGAGACGCCTCCCAGC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGATCTGTCTTCAGCTGCTaGACTCGGGCTTCGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPKVCYIYTPGRRLALGGSVFSC*TRASDS Trigger: GGAGTCCGAAGCCCGAGTCCAGCAGCTGAAGACAGA...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCATCGAAGCCAAAGATaGCGAAGTCCTTGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLAHRSQR*RSPWEH Trigger: GTGCTCCCAAGGACTTCGCCATCTTTGGCTTCGATG...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACCGAAGCTCCACAACTTaGTATGTGGCCATCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHRSSTT*YVAILE Trigger: CTCTAAGATGGCCACATACCAAGTTGTGGAGCTTCG...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACGAAGCTCCACAACTTaGTATGTGGCCATCTTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRRSSTT*YVAILE Trigger: CTCTAAGATGGCCACATACCAAGTTGTGGAGCTTCG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR TCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACATCCAGCTCCTGCAGCTaGGCGTGCATCTCATCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTSSSCS*ACISSL Trigger: GAGAGATGAGATGCACGCTCAGCTGCAGGAGCTGGA...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAACAGGTGCTTCATGTTaGTGGATTTCCTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGFLPFARNPRLLRAMVTGASC*WISSSK Trigger: CTTTGAAGAGGAAATCCAGCAACATGAAGCACCTGT...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGACTTCCTGCTCTCTTTTaGTGCCCACCAGGAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPKVCYIYTPGRRLALGGLPALF*CPPGDH Trigger: GTGGTCTCCTGGTGGGCAGCAAAAGAGAGCAGGAAG...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACAGGCCCACTTCATCTaGCACCGAGTTCTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIQAHFI*HRVLLQ Trigger: CTGAAGCAGAACTCGGTGGCAGATGAAGTGGGCCTG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTGGCTGACTTGCCCTaGATCTCAGCCATCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPLADLP*ISAILV Trigger: TACCAAGATGGCTGAGATGCAGGGCAAGTCAGCCAG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACCCTCCCTGGCTGACTTaGCCTGCATCTCAGCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDPPWLT*PASQPS Trigger: AGATGGCTGAGATGCAGGGCAAGTCAGCCAGGGAGG...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTAAGGCCTTGGGCACGTaGTCTAAGGTAACGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPKALGT*SKVTAV Trigger: TACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTT...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAAGAAGTGTCCCTTCCTaGTGCAGGTCTTCATCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTTVVRGTQELVSSRLLGRSVPS*CRSSSK Trigger: CTTCGATGAAGACCTGCAGCAGGAAGGGACACTTCT...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAGGTGCTTCATGTTGCTaGATTTCCTCTTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGVLYQALARDSPSCTVLGASCC*ISSSKS Trigger: GGACTTTGAAGAGGAAATCCAGCAACATGAAGCACC...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTATGCCCATGGCTTTGGCACCTACCAGGAGTTAACCGGTGCCAGTCCCTCCACGGTGCTTCATGTTGCTaGATTTCCTCTTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCPWLWHLPGVNRCQSLHGASCC*ISSSKS Trigger: GGACTTTGAAGAGGAAATCCAGCAACATGAAGCACC...GTGGAGGGACTGGCACCGGTTAACTCCTGGTAGGTGCCAAAGCCATGGGCATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGGATTCCCACACCTCTaGCTGCTTCCTGCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPGFPHL*LLPALF Trigger: AAAGAGAGCAGGAAGCAGCCAGAGGTGTGGGAATCC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CCTGGTGGCTTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTCCTTCTGCCAGTTaGAGGAAAAGTCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PGGLAYAGSSTCCLFTLAPPSAS*RKSLQQ Trigger: TTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGG...AGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAAGCCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCATTCCACATCAGCCCTaGCAGCCTGGATCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPIPHQP*QPGSSV Trigger: CACAGAAGATCCAGGCTGCCAGGGCTGATGTGGAAT...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGACATCGAAGCCAAAGATaGCGAAGTCCTTGGGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRHRSQR*RSPWEH Trigger: GTGCTCCCAAGGACTTCGCCATCTTTGGCTTCGATG...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR CAA 72 bp | CTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTaGCTCCTGGAAGTCAGCGCTAAGAAGCATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMQGVLRAASSL*LLEVSAKKHVQ Trigger: CTGCACATGCTTCTTAGCGCTGACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| 3UTR CAA 72 bp | AAAAAGCAGTGGTCCCAGCACTGGGAATCTCTTAGGTaGGCACAGACAACAGTCGTCAGAGGCACACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKQWSQHWESLR*AQTTVVRGTQE Trigger: CTCCTGTGTGCCTCTGACGACTGTTGTCTGTGCCAACCTAAGAGATTCCCAGTGCTGGGACCACTGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGGCGGTACCAGGTGGTaGCAATCCACCAGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTGGTRW*QSTSRE Trigger: TTCTCTACTGGTGGATTGGCACCACCTGGTACCGCC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACGGCGGTACCAGGTGGTaGCAATCCACCAGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDGGTRW*QSTSRE Trigger: TTCTCTACTGGTGGATTGGCACCACCTGGTACCGCC...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACGAGACCACAGCGGGTTaGAATGTCTGCAGCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDETTAG*NVCSPK Trigger: CTTAGGGCTGCAGACATTGCAACCCGCTGTGGTCTC...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTGAGACCACAGCGGGTTaGAATGTCTGCAGCCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSETTAG*NVCSPK Trigger: CTTAGGGCTGCAGACATTGCAACCCGCTGTGGTCTC...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCGTATGGCCTCCTTCTaGCAGTTGGAGGAAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPRMASF*QLEEKS Trigger: AGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAAAGGCCTTGGGCACGTaGTCTAAGGTAACGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIKALGT*SKVTAV Trigger: TACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTT...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCAGGTTCAGCGAGAAGTaGCTGGTTAGGACGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPRFSEK*LVRTKT Trigger: TGTCTTCGTCCTAACCAGGCACTTCTCGCTGAACCT...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTGGTGCTTCATGTTGCTaGATTTCCTCTTCAAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VLYQALARDSPSCTVLSTGASCC*ISSSKS Trigger: GGACTTTGAAGAGGAAATCCAGCAACATGAAGCACC...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCCTCCTTCTGCCAGTTaGAGGAAAAGTCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPPPSAS*RKSLQQ Trigger: TTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGG...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACGACAGGGCATCTTCATaGCTCAGGCTACTGCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDDRASS*LRLLPP Trigger: AGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTC...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGGAGCTGGGGACAGGTaGTTCATGTTGCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTGAGDR*FMLLDF Trigger: GAAATCCAGCAACATGAAGCACCTGTCCCCAGCTCC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACGTATGGCCTCCTTCTaGCAGTTGGAGGAAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIRMASF*QLEEKS Trigger: AGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTAGGCCTCCTGGGTCATaGTTTTCCATTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWLLALNQENPQSHLPTPRPPGS*FSILSS Trigger: TGAAGACAGAATGGAAAAGCATGACCCAGGAGGCCT...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCAGGCCTCCTGGGTCATaGTTTTCCATTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPRPPGS*FSILSS Trigger: TGAAGACAGAATGGAAAAGCATGACCCAGGAGGCCT...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCTGGCTGACTTGCCCTaGATCTCAGCCATCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSLADLP*ISAILV Trigger: TACCAAGATGGCTGAGATGCAGGGCAAGTCAGCCAG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCAAAGAGGCTGAGGAGTaGCGTCTTGGTCTCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VLGTYFQSRVDAGKDELPKEAEE*RLGLIS Trigger: ACTTATGAGACCAAGACGGCACTCCTCAGCCTCTTT...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACAAGGCCTTGGGCACGTaGTCTAAGGTAACGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDKALGT*SKVTAV Trigger: TACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTT...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR GCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTAGTGTCCCTTCCTGCTaGAGGTCTTCATCGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSSVPSC*RSSSKP Trigger: TGGCTTCGATGAAGACCTGCAGCAGGAAGGGACACT...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGGATTCCCACACCTCTaGCTGCTTCCTGCTCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTGFPHL*LLPALF Trigger: AAAGAGAGCAGGAAGCAGCCAGAGGTGTGGGAATCC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTCCTCCTTCTGCCAGTTaGAGGAAAAGTCTGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSPPSAS*RKSLQQ Trigger: TTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGG...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACATTCCACATCAGCCCTaGCAGCCTGGATCTTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKQCKQELRAQESCCRVDIPHQP*QPGSSV Trigger: CACAGAAGATCCAGGCTGCCAGGGCTGATGTGGAAT...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTAAAGAGGCTGAGGAGTaGCGTCTTGGTCTCATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSKEAEE*RLGLIS Trigger: ACTTATGAGACCAAGACGGCACTCCTCAGCCTCTTT...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACATCAGCGAGAAGTGCCTaGTTAGGACGAAGACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTSARSA*LGRRHP Trigger: TGGATGTCTTCGTCCTAACCAGGCACTTCTCGCTGA...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACACCTGGACGATCTTCTTaGAGAGATCTTCCGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YNTAGPAVESKSLFLLSTPGRSS*RDLPSL Trigger: AAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGG...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR TCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCTGGACGATCTTCTTaGAGAGATCTTCCGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSPGRSS*RDLPSL Trigger: AAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTAGGCCTCCTGGGTCATaGTTTTCCATTCTGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHTVAIGTESGEPPKSSRPPGS*FSILSS Trigger: TGAAGACAGAATGGAAAAGCATGACCCAGGAGGCCT...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR GCA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAACAGGTGCTTCATGTTaGTGGATTTCCTCTTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SGEPPKSSPHSSRQPCRITGASC*WISSSK Trigger: CTTTGAAGAGGAAATCCAGCAACATGAAGCACCTGT...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| 3UTR CAA 72 bp | TTGAGAATTCTATATATAATACAGCAGGGCCAGCCGTaGAGTCTAAAAGCCTCTTCCTCCTCTCCACACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LRILYIIQQGQP*SLKASSSSPHK Trigger: CTTGTGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATATATAGAATTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | GCCCCCTGCCGCAGCTCCAGGCGTTCCAGCCGTATGGCCTCCTTCTaGCAGTTGGAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: APCRSSRRSSRMASF*QLEEKSAARASRRR Trigger: GCGGCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCCTGGAGCTGCGGCAGGGGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | CGGATTCGAGCAGAGAGGCGGACCACTGCAAAGCCCTGGGGCCCCTaGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGGCTGCAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: RIRAERRTTAKPWGP*KAQQLPGCTSGCRM Trigger: CATTCTGCAGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGTCCGCCTCTCTGCTCGAATCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 90 bp | GCAGGAGCCCGCTGCGCGCACCCCTGTCTCCAAGAAGGAACTGCCTaGTCCAGTCAGGGAACTGGGATTCCACATCAGCCCTGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AGARCAHPCLQEGTA*SSQGTGIPHQPWQP Trigger: AGGCTGCCAGGGCTGATGTGGAATCCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTGGAGACAGGGGTGCGCGCAGCGGGCTCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | CCAACCCTTCTAGGAGAGACAGGGCATCTTCATGGCTCAGGCTACTaGCTCCTCCATGGCCAGCAGCCCCCTGCCGCAGCTCCAGGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTLLGETGHLHGSGY*LLHGQQPPAAAPGV Trigger: AACGCCTGGAGCTGCGGCAGGGGGCTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTCTCTCCTAGAAGGGTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | TGGATCTTCTGTGGCAGCAGGCCCACTTCATCTGCCACCGAGTTCTaGTTCAGAGTCAGGGCAGCCAGCTCCTGCCGCAGGCTGGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WIFCGSRPTSSATEF*FRVRAASSCRRLAS Trigger: GCTGGCCAGCCTGCGGCAGGAGCTGGCTGCCCTGACTCTGAAGCAGAACTCGGTGGCAGATGAAGTGGGCCTGCTGCCACAGAAGATCCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | GCCGCAGCTCCAGGCGTTCCAGCCGTATGGCCTCCTTCTGCCAGTTaGAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGCCGCTCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPGVPAVWPPSAS*RKSLQQGLPDAAPE Trigger: CTCTGGAGCGGCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCCTGGAGCTGCGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAGGAGGGAGGCAGCAGTaGTCAGGCGGTACCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAGFLPFARNPRLLRAMVGGRQQ*SGGTRW Trigger: CCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCC...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACGCTGCAGGGCCTGCTaGACGATCCGGTGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRRCRAC*TIRCTC Trigger: GCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGCG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 90 bp | GAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGCCGCTCCAGAGAGTaGACCCGGGAGAGAACGCGCTGCTCAGCCTGGAAGTGCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: EEKSAARASRRRSRE*TRERTRCSAWKCWE Trigger: CTCCCAGCACTTCCAGGCTGAGCAGCGCGTTCTCTCCCGGGTTCACTCTCTGGAGCGGCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 90 bp | CCCGAGGTGACTGGGAGTGGTACCACAGGGGGATGCCAAAGAGGCTaGGGAGTGCCGTCTTGGTCTCATAAGTCTCAGAGCAGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: PEVTGSGTTGGCQRG*GVPSWSHKSQSSGC Trigger: GCACCCGCTGCTCTGAGACTTATGAGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | CCTGGGTGCACATCTGGCTGCAGAATGACCCGAGGTGACTGGGAGTaGTACCACAGGGGGATGCCAAAGAGGCTGAGGAGTGCCGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGCTSGCRMTRGDWE*YHRGMPKRLRSAVL Trigger: CAAGACGGCACTCCTCAGCCTCTTTGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGATCAGGGTGGCCCCAGTaGGTCAGGATCCGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRSGWPQ*VRIRSS Trigger: GGAGCTTCGGATCCTGACCAACTGGGGCCACCCTGA...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | ATCCGGTGCACCTGCTCCTCTGTCACCCCAACTATGCCTTCTTTCTaGAGTATCTGTCCCAGGGACGCTGCGGCCTCCCTGGCTGACTTG | + |
|
Preference number: 5 (lower is better) Translates to: IRCTCSSVTPTMPSF*SICPRDAAASLADL Trigger: CAAGTCAGCCAGGGAGGCCGCAGCGTCCCTGGGACAGATACTGCAGAAAGAAGGCATAGTTGGGGTGACAGAGGAGCAGGTGCACCGGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGACGCTGCAGGGCCTGCTaGACGATCCGGTGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRRCRAC*TIRCTC Trigger: GCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGCG...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 90 bp | CCACCATTCCAATCCTGTCCTCACTGTAGCGCTGCAGGGCCTGCTTaGCGATCCGGTGCACCTGCTCCTCTGTCACCCCAACTATGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PPFQSCPHCSAAGPA*RSGAPAPLSPQLCL Trigger: AAGGCATAGTTGGGGTGACAGAGGAGCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGCGCTACAGTGAGGACAGGATTGGAATGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AGTATCTGTCCCAGGGACGCTGCGGCCTCCCTGGCTGACTTGCCCTaGATCTCAGCCATCTTGGTAAGGATCTTGTTCTCCAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SICPRDAAASLADLP*ISAILVRILFSSSC Trigger: GCAGGAGCTGGAGAACAAGATCCTTACCAAGATGGCTGAGATGCAGGGCAAGTCAGCCAGGGAGGCCGCAGCGTCCCTGGGACAGATACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | GGAGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTTGGGCACGTaGTCTAAGGTAACGGCTGTAGGTCGGATTCGAGCAGAGAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GALEIVLLGDKALGT*SKVTAVGRIRAERR Trigger: CCGCCTCTCTGCTCGAATCCGACCTACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AGACATCCAGGAGGGAGGCAGCAGTTGTCAGGCGGTACCAGGTGGTaGCAATCCACCAGTAGAGAAGACCAAAGAGGCGGCCTGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHPGGRQQLSGGTRW*QSTSREDQRGGLQG Trigger: ACCTTGCAGGCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089311.11 |
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| CDS CCA 90 bp | CCAGGTGGTGCCAATCCACCAGTAGAGAAGACCAAAGAGGCGGCCTaGAAAAGTGACCAGAGTCCAGACAAAGGAGCCGGCCCGAGATGC | + |
|
Preference number: 5 (lower is better) Translates to: PGGANPPVEKTKEAA*KSDQSPDKGAGPRC Trigger: GCATCTCGGGCCGGCTCCTTTGTCTGGACTCTGGTCACTTTTCCAGGCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | CGAAGACATCCAGGAGGGAGGCAGCAGTTGTCAGGCGGTACCAGGTaGTGCCAATCCACCAGTAGAGAAGACCAAAGAGGCGGCCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: RRHPGGRQQLSGGTR*CQSTSREDQRGGLE Trigger: TTCCAGGCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | CGAAGACATCCAGGAGGGAGGCAGCAGTTGTCAGGCGGTACCAGGTaGTGCCAATCCACCAGTAGAGAAGACCAAAGAGGCGGCCTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RRHPGGRQQLSGGTR*CQSTSREDQRGGLQ Trigger: TTGCAGGCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089311.11 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGAGTGAGCCCATTGGCCTaGCTGCTCTCAGAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRVSPLA*LLSEPP Trigger: AGGTGGTTCTGAGAGCAGCAAGGCCAATGGGCTCAC...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTATTGGGTGACAAGGCCTaGGGCACGTGCTCTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GAGFLPFARNPRLLRAMVLGDKA*GTCSKV Trigger: TACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAA...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AGACATCCAGGAGGGAGGCAGCAGTTGTCAGGCGGTACCAGGTGGTaGCAATCCACCAGTAGAGAAGACCAAAGAGGCGGCCTGGAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RHPGGRQQLSGGTRW*QSTSREDQRGGLEK Trigger: CTTTTCCAGGCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATAGGAGGGAGGCAGCAGTaGTCAGGCGGTACCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGEPPKSSPHSSRQPCRIGGRQQ*SGGTRW Trigger: CCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCC...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TTGAGCCACACTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCGCTGCAGGGCCTGCTaGACGATCCGGTGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSHTVAIGTESGEPPKSSRCRAC*TIRCTC Trigger: GCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGCG...AGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAGTGTGGCTCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGATGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESGEPPKSSPHSSRQPCRWKAQQ*PGCTSG Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...TCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | CTCCCTCTCTCCCAGCCCCCATCTAACTGCCACCATAGAGGCCAGAAAGGAAGCTTGGGTGACAAGGCCTaGGGCACGTGCTCTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LPLSQPPSNCHHRGQKGSLGDKA*GTCSKV Trigger: TACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAA...GCTTCCTTTCTGGCCTCTATGGTGGCAGTTAGATGGGGGCTGGGAGAGAGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | CTCGGTGTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTATTGGGTGACAAGGCCTaGGGCACGTGCTCTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: LGVLYQALARDSPSCTVLLGDKA*GTCSKV Trigger: TACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAA...TAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGACACCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTCTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VLYQALARDSPSCTVLSTLEIVL*GDKALG Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTTCAGGGTGGCCCCAGTaGGTCAGGATCCGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWLLALNQENPQSHLPTPSGWPQ*VRIRSS Trigger: GGAGCTTCGGATCCTGACCAACTGGGGCCACCCTGA...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 90 bp | CTGAGGAAGATCCGAAAAAGTCTTCTGAGGCCTTGCTCTCCGCGGTaGGCCCATTGGCCTTGCTGCTCTCAGAACCACCTGTTCCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRKIRKSLLRPCSPR*AHWPCCSQNHLFLS Trigger: GGAGAGGAACAGGTGGTTCTGAGAGCAGCAAGGCCAATGGGCTCACCGCGGAGAGCAAGGCCTCAGAAGACTTTTTCGGATCTTCCTCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAGTGAGCCCATTGGCCTaGCTGCTCTCAGAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: QTTVVRGTQELVSSRLLGVSPLA*LLSEPP Trigger: AGGTGGTTCTGAGAGCAGCAAGGCCAATGGGCTCAC...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCTGGTTTCCTCCCGTTTGCTAGGAACCCCAGGCTCCTACGGGCCATGGTAATCTTGGTAAGGATCTaGTTCTCCAGCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GAGFLPFARNPRLLRAMVILVRI*FSSSCS Trigger: GCTGCAGGAGCTGGAGAACAAGATCCTTACCAAGAT...TACCATGGCCCGTAGGAGCCTGGGGTTCCTAGCAAACGGGAGGAAACCAGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGATGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPKVCYIYTPGRRLALGGWKAQQ*PGCTSG Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGACTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QTTVVRGTQELVSSRLLGLEIVL*GDKALG Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS CCA 90 bp | GGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTGCCTGGACCTaGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GTTENSSGSARSAWT*LGRRHPGGRQQLSG Trigger: GCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
||
| CDS-3UTR CAA 90 bp | TCTAGGGGGAAGACTAAGAGAGGCATAGGAGCCTGGTGGCTTGGCTTATGCAGGGCCTCCTTCTGCCAGTaGGAGGAAAAGTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SRGKTKRGIGAWWLGLCRASFCQ*EEKSAA Trigger: TGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGC...CCTGCATAAGCCAAGCCACCAGGCTCCTATGCCTCTCTTAGTCTTCCCCCTAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACTGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKQCKQELRAQESCCRVDWKAQQ*PGCTSG Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCA...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | TTGCAGCTCCTCTTGGCCCCTTCCATAGAGCAGGCAGGACCAAGCCCCTCAAGACCGAAGCTCCACAACTaGGTATGTGGCCATCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: LQLLLAPSIEQAGPSPSRPKLHN*VCGHLR Trigger: TCTAAGATGGCCACATACCAAGTTGTGGAGCTTCGG...TCTTGAGGGGCTTGGTCCTGCCTGCTCTATGGAAGGGGCCAAGAGGAGCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACATCAGGGTGGCCCCAGTaGGTCAGGATCCGAAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YNTAGPAVESKSLFLLSTSGWPQ*VRIRSS Trigger: GGAGCTTCGGATCCTGACCAACTGGGGCCACCCTGA...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AATAGAAGGTCTGGATGGGCTCCCCATCCTGGTCGTAGGCAAACGTaGCAAGAAGTGTCCCTTCCTGCTGCAGGTCTTCATCGAAGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: NRRSGWAPHPGRRQT*QEVSLPAAGLHRSQ Trigger: TTGGCTTCGATGAAGACCTGCAGCAGGAAGGGACACTTCTTGGCACGTTTGCCTACGACCAGGATGGGGAGCCCATCCAGACCTTCTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 90 bp | GCAGAAGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTGCCTaGACCTGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: AEGTTENSSGSARSA*TWLGRRHPGGRQQL Trigger: CAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
||
| CDS CCA 90 bp | GCAGAAGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTGCCTaGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTTGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: AEGTTENSSGSARSA*LGRRHPGGRQQLSG Trigger: GCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTGCCTCCTTCTGCCAGTaGGAGGAAAAGTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LWLLALNQENPQSHLPTPASFCQ*EEKSAA Trigger: TGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGC...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS-3UTR CAA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGAGATCTTCCGAGTCTaGGTGATGCTCTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: VLGTYFQSRVDAGKDELPEIFRV*VMLCPQ Trigger: CTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GTCCTTTACCAGGCACTTGCCAGGGACAGTCCCAGCTGCACAGTGCTAAGCACTATCTTGGTAAGGATCTaGTTCTCCAGCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VLYQALARDSPSCTVLSTILVRI*FSSSCS Trigger: GCTGCAGGAGCTGGAGAACAAGATCCTTACCAAGAT...AGTGCTTAGCACTGTGCAGCTGGGACTGTCCCTGGCAAGTGCCTGGTAAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTCTAGACAACCCTGCAGAATACTGGAGATAGTGCTGTaGGGTGACAAGGCCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SGEPPKSSPHSSRQPCRILEIVL*GDKALG Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAG...TATTCTGCAGGGTTGTCTAGAGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | CAGACAACAGTCGTCAGAGGCACACAGGAGCTGGTTTCCTCCCGTTTGCTAGGAAAGATGGCGAAGTCCTaGGGAGCACTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTTVVRGTQELVSSRLLGKMAKS*GALEIV Trigger: CACTATCTCCAGTGCTCCCAAGGACTTCGCCATCTT...TCCTAGCAAACGGGAGGAAACCAGCTCCTGTGTGCCTCTGACGACTGTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AAGAGCAGAAGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTaGCTGGACCTGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSRRNHRKLFRFSEK*LDLVRTKTSRREAA Trigger: TGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCTTCTGCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
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| CDS-3UTR CAA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGTGAGCCCATTGGCCTaGCTGCTCTCAGAACCACCT | + |
|
Preference number: 5 (lower is better) Translates to: YNTAGPAVESKSLFLLSTVSPLA*LLSEPP Trigger: AGGTGGTTCTGAGAGCAGCAAGGCCAATGGGCTCAC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGAGAGATCTTCCGAGTCTaGGTGATGCTCTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPKVCYIYTPGRRLALGGEIFRV*VMLCPQ Trigger: CTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTC...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCAAGATGGCGAAGTCCTaGGGAGCACTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: VLGTYFQSRVDAGKDELPKMAKS*GALEIV Trigger: CACTATCTCCAGTGCTCCCAAGGACTTCGCCATCTT...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | CTGTGGCTATTGGCACTGAATCAGGAGAACCCCCAAAGTCATCTCCCCACTCCTAAGATGGCGAAGTCCTaGGGAGCACTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LWLLALNQENPQSHLPTPKMAKS*GALEIV Trigger: CACTATCTCCAGTGCTCCCAAGGACTTCGCCATCTT...AGGAGTGGGGAGATGACTTTGGGGGTTCTCCTGATTCAGTGCCAATAGCCACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | AAGAGCAGAAGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTaGCTGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSRRNHRKLFRFSEK*LVRTKTSRREAAVV Trigger: GACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCTTCTGCTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACGCCTCCTTCTGCCAGTaGGAGGAAAAGTCTGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RKQCKQELRAQESCCRVDASFCQ*EEKSAA Trigger: TGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGC...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGAGATCTTCCGAGTCTaGGTGATGCTCTGCCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: YNTAGPAVESKSLFLLSTEIFRV*VMLCPQ Trigger: CTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | GTGCTGGGCACCTATTTTCAGAGCAGGGTAGATGCTGGGAAAGATGAGCTTCCCGCCTGGACGATCTTCTaGAAGAGATCTTCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VLGTYFQSRVDAGKDELPAWTIF*KRSSES Trigger: AGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGC...GGGAAGCTCATCTTTCCCAGCATCTACCCTGCTCTGAAAATAGGTGCCCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 90 bp | CTGGACGATCTTCTTGAAGAGATCTTCCGAGTCTTGGTGATGCTCTaGCCTCAGGGTAGCCAATTCTTCCTGGATATGAGCCACTGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LDDLLEEIFRVLVML*PQGSQFFLDMSHCV Trigger: GACACAGTGGCTCATATCCAGGAAGAATTGGCTACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TTGGCTTATGCAGGGAGTTCTACGTGCTGCCTCTTCACTCTTGCTCCTGGAAGTGCCTGGACGATCTTCTaGAAGAGATCTTCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LAYAGSSTCCLFTLAPGSAWTIF*KRSSES Trigger: AGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGC...ACTTCCAGGAGCAAGAGTGAAGAGGCAGCACGTAGAACTCCCTGCATAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGAATCTTGGTAAGGATCTaGTTCTCCAGCTCCTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SPKVCYIYTPGRRLALGGILVRI*FSSSCS Trigger: GCTGCAGGAGCTGGAGAACAAGATCCTTACCAAGAT...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TCCCCCAAAGTATGCTACATATATACACCTGGTAGGCGCCTAGCTCTAGGGGGACCGAAGCTCCACAACTaGGTATGTGGCCATCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPKVCYIYTPGRRLALGGPKLHN*VCGHLR Trigger: TCTAAGATGGCCACATACCAAGTTGTGGAGCTTCGG...TCCCCCTAGAGCTAGGCGCCTACCAGGTGTATATATGTAGCATACTTTGGGGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | TATAATACAGCAGGGCCAGCCGTTGAGTCTAAAAGCCTCTTCCTCCTCTCCACAGCCTGGACGATCTTCTaGAAGAGATCTTCCGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: YNTAGPAVESKSLFLLSTAWTIF*KRSSES Trigger: AGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGC...TGTGGAGAGGAGGAAGAGGCTTTTAGACTCAACGGCTGGCCCTGCTGTATTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS-3UTR CAA 90 bp | AGGAAGCAGTGTAAGCAAGAGCTGAGAGCCCAAGAGAGTTGCTGTAGAGTAGACCCGAAGCTCCACAACTaGGTATGTGGCCATCTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKQCKQELRAQESCCRVDPKLHN*VCGHLR Trigger: TCTAAGATGGCCACATACCAAGTTGTGGAGCTTCGG...GTCTACTCTACAGCAACTCTCTTGGGCTCTCAGCTCTTGCTTACACTGCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | GCAGAGAGGCGGACCACTGCAAAGCCCTGGGGCCCCTaGAAGGCCCAGCAGTTGCCTGGGTGCACATCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: AERRTTAKPWGP*KAQQLPGCTSG Trigger: GCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGTCCGCCTCTCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | AGGCGGACCACTGCAAAGCCCTGGGGCCCCTGGAAGGCCCAGCAGTaGCCTGGGTGCACATCTGGCTGCAGAATGACCCGAGGTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRTTAKPWGPWKAQQ*PGCTSGCRMTRGDW Trigger: CCAGTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCCAGGCAACTGCTGGGCCTTCCAGGGGCCCCAGGGCTTTGCAGTGGTCCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | ACCCGGGAGAGAACGCGCTGCTCAGCCTGGAAGTGCTaGGAGGCGTCTCTGGATTCCCACACCTCTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRERTRCSAWKC*EASLDSHTSGC Trigger: GCAGCCAGAGGTGTGGGAATCCAGAGACGCCTCCCAGCACTTCCAGGCTGAGCAGCGCGTTCTCTCCCGGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS GCA 72 bp | CTAGGAGAGACAGGGCATCTTCATGGCTCAGGCTACTaGCTCCTCCATGGCCAGCAGCCCCCTGCCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LGETGHLHGSGY*LLHGQQPPAAA Trigger: AGCTGCGGCAGGGGGCTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTCTCTCCTAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS GCA 72 bp | TGTGGCAGCAGGCCCACTTCATCTGCCACCGAGTTCTaGTTCAGAGTCAGGGCAGCCAGCTCCTGCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: CGSRPTSSATEF*FRVRAASSCRR Trigger: CCTGCGGCAGGAGCTGGCTGCCCTGACTCTGAAGCAGAACTCGGTGGCAGATGAAGTGGGCCTGCTGCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS CAA 90 bp | TGCCGCAGCTCCAGGCGTTCCAGCCGTATGGCCTCCTTCTGCCAGTaGGAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGCCGCTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CRSSRRSSRMASFCQ*EEKSAARASRRRSR Trigger: TCTGGAGCGGCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCCTGGAGCTGCGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS GCA 72 bp | CCTGGCTTCCTGCCACGGAGCTCGCACCACTGCTGCTaGTGCCGCCATCGTTATCATCCTGAGAGTAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGFLPRSSHHCC*CRHRYHPESSE Trigger: CTCGCTACTCTCAGGATGATAACGATGGCGGCAGCAGCAGCAGTGGTGCGAGCTCCGTGGCAGGAAGCCAGG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 ENSMUST00000159660.2 ENSMUST00000162499.2 |
||
| CDS CCA 72 bp | CGCGCTGCTCAGCCTGGAAGTGCTGGGAGGCGTCTCTaGATTCCCACACCTCTGGCTGCTTCCTGCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RAAQPGSAGRRL*IPTPLAASCSL Trigger: AAGAGAGCAGGAAGCAGCCAGAGGTGTGGGAATCCAGAGACGCCTCCCAGCACTTCCAGGCTGAGCAGCGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS TCA 72 bp | CGCTGCGCGCACCCCTGTCTCCAAGAAGGAACTGCCTaGTCCAGTCAGGGAACTGGGATTCCACATCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: RCAHPCLQEGTA*SSQGTGIPHQP Trigger: GGGCTGATGTGGAATCCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTGGAGACAGGGGTGCGCGCAGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS TCA 72 bp | CAATCCTGTCCTCACTGTAGCGCTGCAGGGCCTGCTTaGCGATCCGGTGCACCTGCTCCTCTGTCACCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: QSCPHCSAAGPA*RSGAPAPLSPQ Trigger: TTGGGGTGACAGAGGAGCAGGTGCACCGGATCGTCAAGCAGGCCCTGCAGCGCTACAGTGAGGACAGGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS GCA 72 bp | GGAGGGAGGCAGCAGTTGTCAGGCGGTACCAGGTGGTaGCAATCCACCAGTAGAGAAGACCAAAGAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GGRQQLSGGTRW*QSTSREDQRGG Trigger: GCCGCCTCTTTGGTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
||
| CDS CCA 72 bp | CCAGGCGTTCCAGCCGTATGGCCTCCTTCTGCCAGTTaGAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGVPAVWPPSAS*RKSLQQGLPDA Trigger: GGCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | GGGTGCACATCTGGCTGCAGAATGACCCGAGGTGACTaGGAGTGGTACCACAGGGGGATGCCAAAGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GCTSGCRMTRGD*EWYHRGMPKRL Trigger: CAGCCTCTTTGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTGCAGCCAGATGTGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 72 bp | AGCCCGCTGCGCGCACCCCTGTCTCCAAGAAGGAACTaGCTGATCCAGTCAGGGAACTGGGATTCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: SPLRAPLSPRRN*LIQSGNWDSTS Trigger: TGATGTGGAATCCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTGGAGACAGGGGTGCGCGCAGCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | CTCACCAACCCTTCTAGGAGAGACAGGGCATCTTCATaGCTCAGGCTACTGCCTCCTCCATGGCCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: LTNPSRRDRASS*LRLLPPPWPAA Trigger: GGCTGCTGGCCATGGAGGAGGCAGTAGCCTGAGCCATGAAGATGCCCTGTCTCTCCTAGAAGGGTTGGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 72 bp | TCCAGGCGTTCCAGCCGTATGGCCTCCTTCTGCCAGTaGGAGGAAAAGTCTGCAGCAAGGGCTTCCAGACGC | + |
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Preference number: 6 (lower is better) Translates to: SRRSSRMASFCQ*EEKSAARASRR Trigger: GCGTCTGGAAGCCCTTGCTGCAGACTTTTCCTCCAACTGGCAGAAGGAGGCCATACGGCTGGAACGCCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | GCCTGGACCTGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTaGTCAGGCGGTACCAGGTGGTGCCAATCCACCAGTAGAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: AWTWLGRRHPGGRQQ*SGGTRWCQSTSRED Trigger: GTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
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| CDS GCA 72 bp | GTGGTACCACAGGGGGATGCCAAAGAGGCTGAGGAGTaGCGTCTTGGTCTCATAAGTCTCAGAGCAGCGGGT | + |
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Preference number: 6 (lower is better) Translates to: VVPQGDAKEAEE*RLGLISLRAAG Trigger: ACCCGCTGCTCTGAGACTTATGAGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCCCCCTGTGGTACCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | ACATCTGGCTGCAGAATGACCCGAGGTGACTGGGAGTaGTACCACAGGGGGATGCCAAAGAGGCTGAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: TSGCRMTRGDWE*YHRGMPKRLRS Trigger: ACTCCTCAGCCTCTTTGGCATCCCCCTGTGGTACCACTCCCAGTCACCTCGGGTCATTCTGCAGCCAGATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 72 bp | TGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTaGTCAGGCGGTACCAGGTGGTGCCAATCCACCAGT | + |
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Preference number: 6 (lower is better) Translates to: WLGRRHPGGRQQ*SGGTRWCQSTS Trigger: ACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 72 bp | GGAGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTaGGGCACGTGCTCTAAGGTAACGGCTGTAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: GALEIVLLGDKA*GTCSKVTAVGR Trigger: CCGACCTACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | CCTTCCTGCTGCAGGTCTTCATCGAAGCCAAAGATGGCGAAGTCCTaGGGAGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTTGGGC | + |
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Preference number: 6 (lower is better) Translates to: PSCCRSSSKPKMAKS*GALEIVLLGDKALG Trigger: GCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCTCCCAAGGACTTCGCCATCTTTGGCTTCGATGAAGACCTGCAGCAGGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | AGAAGTGCCTGGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAGTaGTCAGGCGGTACCAGGTGGTGCCAATCCACCAGTAGAGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: RSAWLGRRHPGGRQQ*SGGTRWCQSTSRED Trigger: GTCTTCTCTACTGGTGGATTGGCACCACCTGGTACCGCCTGACAACTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGCACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
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| CDS TCA 72 bp | ACCAGTAGAGAAGACCAAAGAGGCGGCCTGGAAAAGTaGCCAGAGTCCAGACAAAGGAGCCGGCCCGAGATG | + |
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Preference number: 6 (lower is better) Translates to: TSREDQRGGLEK*PESRQRSRPEM Trigger: CATCTCGGGCCGGCTCCTTTGTCTGGACTCTGGTCACTTTTCCAGGCCGCCTCTTTGGTCTTCTCTACTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000100439.10 |
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| CDS TCA 72 bp | TGCTCTGCCCTCAGGGTAGCCAATTCTTCCTGGATATaGGCCACTGTGTCCCTGCGCAAGTCCTCCTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: CSALRVANSSWI*ATVSLRKSSFR Trigger: CCTGAAGGAGGACTTGCGCAGGGACACAGTGGCTCATATCCAGGAAGAATTGGCTACCCTGAGGGCAGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 72 bp | GGGCTTCGGACTCCTGAGAGGCCTGGACGATCTTCTTaGAGAGATCTTCCGAGTCTTGGTGATGCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: GLRTPERPGRSS*RDLPSLGDALP Trigger: GGGCAGAGCATCACCAAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGCCTCTCAGGAGTCCGAAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 72 bp | ACTGGGAGTGGTACCACAGGGGGATGCCAAAGAGGCTaGGGAGTGCCGTCTTGGTCTCATAAGTCTCAGAGC | + |
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Preference number: 6 (lower is better) Translates to: TGSGTTGGCQRG*GVPSWSHKSQS Trigger: GCTCTGAGACTTATGAGACCAAGACGGCACTCCTCAGCCTCTTTGGCATCCCCCTGTGGTACCACTCCCAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 72 bp | TCTGGATGGGCTCCCCATCCTGGTCGTAGGCAAACGTaGCAAGAAGTGTCCCTTCCTGCTGCAGGTCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SGWAPHPGRRQT*QEVSLPAAGLH Trigger: ATGAAGACCTGCAGCAGGAAGGGACACTTCTTGGCACGTTTGCCTACGACCAGGATGGGGAGCCCATCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | AAGTCCTTGGGAGCACTGGAGATAGTGCTGTTGGGTGACAAGGCCTaGGGCACGTGCTCTAAGGTAACGGCTGTAGGTCGGATTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: KSLGALEIVLLGDKA*GTCSKVTAVGRIRA Trigger: TGCTCGAATCCGACCTACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTCCAGTGCTCCCAAGGACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS TCA 72 bp | CTCAGAGCAGCGGGTGCTGATAACACTGGCTCCTCCTaGTTCCAGGGCGTAATCCACCATTCCAATCCTGTC | + |
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Preference number: 6 (lower is better) Translates to: LRAAGADNTGSS*FQGVIHHSNPV Trigger: GACAGGATTGGAATGGTGGATTACGCCCTGGAATCAGGAGGAGCCAGTGTTATCAGCACCCGCTGCTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 72 bp | GAGATAGTGCTGTTGGGTGACAAGGCCTTGGGCACGTaGTCTAAGGTAACGGCTGTAGGTCGGATTCGAGCA | + |
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Preference number: 6 (lower is better) Translates to: EIVLLGDKALGT*SKVTAVGRIRA Trigger: TGCTCGAATCCGACCTACAGCCGTTACCTTAGAGCACGTGCCCAAGGCCTTGTCACCCAACAGCACTATCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | GAAAACTCTTCAGGTTCAGCGAGAAGTGCCTGGACCTaGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ENSSGSARSAWT*LGRRHPGGRQQ Trigger: CTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCTGAAGAGTTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
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| CDS CCA 72 bp | TCTCCAAGAAGGAACTGCCTGATCCAGTCAGGGAACTaGGATTCCACATCAGCCCTGGCAGCCTGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: SPRRNCLIQSGN*DSTSALAAWIF Trigger: GAAGATCCAGGCTGCCAGGGCTGATGTGGAATCCCAGTTCCCTGACTGGATCAGGCAGTTCCTTCTTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CCA 72 bp | ACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTGCCTaGTTAGGACGAAGACATCCAGGAGGGAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TTENSSGSARSA*LGRRHPGGRQQ Trigger: CTGCTGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
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| CDS GCA 72 bp | AGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTaGCTGGACCTGGTTAGGACGAAGACATCCAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: RNHRKLFRFSEK*LDLVRTKTSRR Trigger: CCTCCTGGATGTCTTCGTCCTAACCAGGTCCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 |
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| CDS GCA 72 bp | AGGAACCACAGAAAACTCTTCAGGTTCAGCGAGAAGTaGCTGGTTAGGACGAAGACATCCAGGAGGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RNHRKLFRFSEK*LVRTKTSRREA Trigger: TGCCTCCCTCCTGGATGTCTTCGTCCTAACCAGGCACTTCTCGCTGAACCTGAAGAGTTTTCTGTGGTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100439.10 |
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| CDS CAA 72 bp | GGCCTGGACGATCTTCTTGAAGAGATCTTCCGAGTCTaGGTGATGCTCTGCCCTCAGGGTAGCCAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: GLDDLLEEIFRV*VMLCPQGSQFF Trigger: GAAGAATTGGCTACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 72 bp | TGCAGGTCTTCATCGAAGCCAAAGATGGCGAAGTCCTaGGGAGCACTGGAGATAGTGCTGTTGGGTGACAAG | + |
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Preference number: 6 (lower is better) Translates to: CRSSSKPKMAKS*GALEIVLLGDK Trigger: CTTGTCACCCAACAGCACTATCTCCAGTGCTCCCAAGGACTTCGCCATCTTTGGCTTCGATGAAGACCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS CAA 90 bp | CTCCTGAGAGGCCTGGACGATCTTCTTGAAGAGATCTTCCGAGTCTaGGTGATGCTCTGCCCTCAGGGTAGCCAATTCTTCCTGGATATG | + |
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Preference number: 6 (lower is better) Translates to: LLRGLDDLLEEIFRV*VMLCPQGSQFFLDM Trigger: CATATCCAGGAAGAATTGGCTACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTCTTCAAGAAGATCGTCCAGGCCTCTCAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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| CDS GCA 72 bp | CTTCTTGAAGAGATCTTCCGAGTCTTGGTGATGCTCTaGCCTCAGGGTAGCCAATTCTTCCTGGATATGAGC | + |
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Preference number: 6 (lower is better) Translates to: LLEEIFRVLVML*PQGSQFFLDMS Trigger: GCTCATATCCAGGAAGAATTGGCTACCCTGAGGGCAGAGCATCACCAAGACTCGGAAGATCTCTTCAAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000046259.14 ENSMUST00000089311.11 ENSMUST00000100439.10 |
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