Pregenerated sensors for SUMO3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020265Ensembl transcript IDs: ENSMUST00000020501.15, ENSMUST00000099538.6, ENSMUST00000124024.3, ENSMUST00000129492.8, ENSMUST00000137841.9, ENSMUST00000141228.9, ENSMUST00000173691.2
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTACCACCCTTACCCATGTACCCAGTACCAGTACCGAGCAGGAAGTaGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: VPPLPMYPVPVPSRK*ARAGAPGHRRKTPH Trigger: GTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGTACTGGGTACATGGGTAAGGGTGGTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| 3UTR GCA 90 bp | CCACCTTATCTTCACACACCTAGGGGAGGAGAGCCAAGTGGTATGTaGAAAGTCAGGACCAGCAGGCAGGCAGCTGGACCAGTGTGGGGC | + |
|
Preference number: 1 (lower is better) Translates to: PPYLHTPRGGEPSGM*KVRTSRQAAGPVWG Trigger: GCCCCACACTGGTCCAGCTGCCTGCCTGCTGGTCCTGACTTTGCACATACCACTTGGCTCTCCTCCCCTAGGTGTGTGAAGATAAGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR TCA 90 bp | GGACCCTCACAGAAGGATGGCAGGCAGGAACTATGGACATTGAACTaGCCCCACAATGCGGAACCCAAGCTACCCACTGATGCGTCACTT | + |
|
Preference number: 1 (lower is better) Translates to: GPSQKDGRQELWTLN*PHNAEPKLPTDASL Trigger: AAGTGACGCATCAGTGGGTAGCTTGGGTTCCGCATTGTGGGGTCAGTTCAATGTCCATAGTTCCTGCCTGCCATCCTTCTGTGAGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR GCA 90 bp | AGCTGGACCAGTGTGGGGCACATGGTACAGAGCAAGCTAAGCAACTaGCTTGTCTGTCCATCTAAGTGGCCTCACTGGACAGACTGTCAA | + |
|
Preference number: 1 (lower is better) Translates to: SWTSVGHMVQSKLSN*LVCPSKWPHWTDCQ Trigger: TTGACAGTCTGTCCAGTGAGGCCACTTAGATGGACAGACAAGGCAGTTGCTTAGCTTGCTCTGTACCATGTGCCCCACACTGGTCCAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR CCA 90 bp | AAGGCAGAGATGGCCATCAAGCAGCAATGGACCCTCACAGAAGGATaGCAGGCAGGAACTATGGACATTGAACTGACCCCACAATGCGGA | + |
|
Preference number: 1 (lower is better) Translates to: KAEMAIKQQWTLTEG*QAGTMDIELTPQCG Trigger: TCCGCATTGTGGGGTCAGTTCAATGTCCATAGTTCCTGCCTGCCATCCTTCTGTGAGGGTCCATTGCTGCTTGATGGCCATCTCTGCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR TCA 90 bp | AAGCGCGTCGGAAAAGGAGAATCCTTCGGTGACTCTGGCTTCTGCTaGCTCTTGTGTGATTGGGTGTGGCTGCATGGTCACTGCTCAATA | + |
|
Preference number: 1 (lower is better) Translates to: KRVGKGESFGDSGFC*LLCDWVWLHGHCSI Trigger: TATTGAGCAGTGACCATGCAGCCACACCCAATCACACAAGAGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCTTTTCCGACGCGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR CCA 90 bp | AGCGAGAGATGTAGGTCAGTGTCAGGTGACTATAAAAGGCAGAGATaGCCATCAAGCAGCAATGGACCCTCACAGAAGGATGGCAGGCAG | + |
|
Preference number: 1 (lower is better) Translates to: SERCRSVSGDYKRQR*PSSSNGPSQKDGRQ Trigger: CTGCCTGCCATCCTTCTGTGAGGGTCCATTGCTGCTTGATGGCCATCTCTGCCTTTTATAGTCACCTGACACTGACCTACATCTCTCGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR GCA 90 bp | CCAAGCTACCCACTGATGCGTCACTTTAATACACACTTGGAAAGCTaGACAGCACAGTCCGTGAGAATGAGGTCACCTTTCCTGGGCTTG | + |
|
Preference number: 1 (lower is better) Translates to: PSYPLMRHFNTHLES*TAQSVRMRSPFLGL Trigger: CAAGCCCAGGAAAGGTGACCTCATTCTCACGGACTGTGCTGTGCAGCTTTCCAAGTGTGTATTAAAGTGACGCATCAGTGGGTAGCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR GCA 90 bp | TTTAATATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTaGCCCTCCCCACATCCCACAGGCATGCCCATTGGGGAATATGAC | + |
|
Preference number: 1 (lower is better) Translates to: FNILCLQRTGGILPL*PSPHPTGMPIGEYD Trigger: GTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATATTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 |
||
| 3UTR TCA 90 bp | ATGGACATTGAACTGACCCCACAATGCGGAACCCAAGCTACCCACTaGTGCGTCACTTTAATACACACTTGGAAAGCTGCACAGCACAGT | + |
|
Preference number: 1 (lower is better) Translates to: MDIELTPQCGTQATH*CVTLIHTWKAAQHS Trigger: ACTGTGCTGTGCAGCTTTCCAAGTGTGTATTAAAGTGACGCATCAGTGGGTAGCTTGGGTTCCGCATTGTGGGGTCAGTTCAATGTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR TCA 90 bp | GCTTGGAGCTTGTGCTCGACTGATAGACTAACATGGCTCAGGCAATaGCAACCCTGGGTTTTATCTAACCTAAGTACTGAAACCCCTCAC | + |
|
Preference number: 1 (lower is better) Translates to: AWSLCSTDRLTWLRQ*QPWVLSNLSTETPH Trigger: GTGAGGGGTTTCAGTACTTAGGTTAGATAAAACCCAGGGTTGTCATTGCCTGAGCCATGTTAGTCTATCAGTCGAGCACAAGCTCCAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR GCA 90 bp | AATGGTGTCCTCATCCTCCATCTCCAGCTTGGCTGGAGTGCAGCATaGGAGAAAAAGGGTTACTGTAGAGTCACAGTAACTATTTATCCA | + |
|
Preference number: 1 (lower is better) Translates to: NGVLILHLQLGWSAA*EKKGYCRVTVTIYP Trigger: TGGATAAATAGTTACTGTGACTCTACAGTAACCCTTTTTCTCGCATGCTGCACTCCAGCCAAGCTGGAGATGGAGGATGAGGACACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR CCA 90 bp | CTTGTCTGTCCATCTAAGTGGCCTCACTGGACAGACTGTCAACAGTaGGCTGTGACATATGACCCGTCTCCAAATACAGTGTTTAACATA | + |
|
Preference number: 1 (lower is better) Translates to: LVCPSKWPHWTDCQQ*AVTYDPSPNTVFNI Trigger: TATGTTAAACACTGTATTTGGAGACGGGTCATATGTCACAGCCCACTGTTGACAGTCTGTCCAGTGAGGCCACTTAGATGGACAGACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGTACCGAGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGGAATTCTGCCTCTCTaGCCCTCCCCACATCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: TSTEQEVGTCRSAWPQEEGILPL*PSPHPT Trigger: TGTGGGATGTGGGGAGGGGCAGAGAGGCAGAATTCC...TTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACTGTCGACTCTGGCTTCTGCTaGCTCTTGTGTGATTGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: GSGHVQERLATGGRPLTVDSGFC*LLCDWV Trigger: CACCCAATCACACAAGAGTCAGCAGAAGCCAGAGTC...GACAGTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | TGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACTGTCTTAAGCTGCTGACTCTTGTGTaGTTGGGTGTGGCTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: WARAGAPGHRRKTPHCLKLLTLV*LGVAAW Trigger: CCATGCAGCCACACCCAATCACACAAGAGTCAGCAG...CTTAAGACAGTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACCAAGCTCTCTCTACCTaGTCAGGACAAGTCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: SRKWARAGAPGHRRKTPHQALST*SGQVTL Trigger: CAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTG...GTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAGCTCCCTCGGGAGGCTaGTCCTCCTGTCTGCTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: YSMPTTNRWNSASLPLPTAPSGG*SSCLLL Trigger: CAGCAGCAGACAGGAGGATCAGCCTCCCGAGGGAGC...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGGCAGCTGGACCAGTGTGGGGCACATGGTACAGAGCAAGCTAAGCAACACTCAGGCCATAGGGTaGGAATCTACATCCAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: QAGSWTSVGHMVQSKLSNTQAIG*ESTSRP Trigger: GGGTCTGGATGTAGATTCTCACCCTATGGCCTGAGT...GTTGCTTAGCTTGCTCTGTACCATGTGCCCCACACTGGTCCAGCTGCCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR GCA 90 bp | CAGGCAGGCAGCTGGACCAGTGTGGGGCACATGGTACAGAGCAAGCTAAGCAACCACATCCCACAGGCATaGCCATTGGGGAATATGACC | + |
|
Preference number: 2 (lower is better) Translates to: QAGSWTSVGHMVQSKLSNHIPQA*PLGNMT Trigger: GGTCATATTCCCCAATGGGCATGCCTGTGGGATGTG...GTTGCTTAGCTTGCTCTGTACCATGTGCCCCACACTGGTCCAGCTGCCTGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGGAATATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGACAACGGTTGGGTGTaGGGACGCTCCCTCGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LGNMTTSSLYLIRTSHTGDNGWV*GRSLGR Trigger: CCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGTC...TCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATATTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAGGAATTCTGCCTCTCTaGCCCTCCCCACATCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: YSMPTTNRWNSASLPLPTGILPL*PSPHPT Trigger: TGTGGGATGTGGGGAGGGGCAGAGAGGCAGAATTCC...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAGAACAGGTGGAATTCTaGCTCTCTGCCCCTCCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: YSMPTTNRWNSASLPLPTEQVEF*LSAPPH Trigger: GTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTC...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGTACCGAGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAATGTCTTAAGAAGCACTaGTCTTCCCCTTTAACTTAC | + |
|
Preference number: 2 (lower is better) Translates to: TSTEQEVGTCRSAWPQEECLKKH*SSPLTY Trigger: GTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACA...TTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| 3UTR-3UTR TCA 90 bp | GACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGCTGCTGACTCTTGTGTaGTTGGGTGTGGCTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: DHKLSLPDQDKSHWRKPQLLTLV*LGVAAW Trigger: CCATGCAGCCACACCCAATCACACAAGAGTCAGCAG...CTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTAACTCAGGCCATAGGGTaGGAATCTACATCCAGACCC | + |
|
Preference number: 2 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLTQAIG*ESTSRP Trigger: GGGTCTGGATGTAGATTCTCACCCTATGGCCTGAGT...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR GCA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTACACATCCCACAGGCATaGCCATTGGGGAATATGACC | + |
|
Preference number: 2 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLHIPQA*PLGNMT Trigger: GGTCATATTCCCCAATGGGCATGCCTGTGGGATGTG...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR GCA 90 bp | TCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCACCAGCTTGGCTGGAGTaGAGCATGCGAGAAAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SGQVTLEETTVLGIGLRPPAWLE*SMREKG Trigger: CCCTTTTTCTCGCATGCTGCACTCCAGCCAAGCTGG...TGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGAGGAAGACCCCTCACTGTCTTAAGAAGCACTGGTCTTCCCCTTTAACTCTGCTGACTCTTGTGTaGTTGGGTGTGGCTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: HRRKTPHCLKKHWSSPLTLLTLV*LGVAAW Trigger: CCATGCAGCCACACCCAATCACACAAGAGTCAGCAG...AGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTGAGGGGTCTTCCTCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | AGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCATACTGCTGACTCTTGTGTaGTTGGGTGTGGCTGCATGG | + |
|
Preference number: 2 (lower is better) Translates to: RTSHTGGNHSSRDWTQAILLTLV*LGVAAW Trigger: CCATGCAGCCACACCCAATCACACAAGAGTCAGCAG...TATGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCAGGAGAATCCTTCGGTaGCTCTGGCTTCTGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: IRTSHTGGNHSSRDWTQARRILR*LWLLLT Trigger: AGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCT...GGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCATAGGGAGGAGAATCCTTCGGTaGCTCTGGCTTCTGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: TSHTGGNHSSRDWTQAIGRRILR*LWLLLT Trigger: AGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCT...CCCTATGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | GACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGAGGAGAATCCTTCGGTaGCTCTGGCTTCTGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: DHKLSLPDQDKSHWRKPQRRILR*LWLLLT Trigger: AGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCT...CTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAGGAGAATCCTTCGGTaGCTCTGGCTTCTGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: GNMTTSSLYLIRTSHTGGRRILR*LWLLLT Trigger: AGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCT...TCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR TCA 90 bp | CAGGCAGGCAGCTGGACCAGTGTGGGGCACATGGTACAGAGCAAGCTAAGCAACTTTTACAACCACACTTaGAAGCAGGTCTCTTACACA | + |
|
Preference number: 2 (lower is better) Translates to: QAGSWTSVGHMVQSKLSNFYNHT*KQVSYT Trigger: TGTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAA...GTTGCTTAGCTTGCTCTGTACCATGTGCCCCACACTGGTCCAGCTGCCTGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR GCA 90 bp | CTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGCACATCCCACAGGCATaGCCATTGGGGAATATGACC | + |
|
Preference number: 2 (lower is better) Translates to: LYLIRTSHTGGNHSSRDWHIPQA*PLGNMT Trigger: GGTCATATTCCCCAATGGGCATGCCTGTGGGATGTG...CCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR-3UTR GCA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAGCTGATCCTCCTGTCTaGTGCTGGAATACATCAATG | + |
|
Preference number: 2 (lower is better) Translates to: YSMPTTNRWNSASLPLPTADPPV*CWNTSM Trigger: CATTGATGTATTCCAGCAGCAGACAGGAGGATCAGC...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR CAA 90 bp | AGCTGCACAGCACAGTCCGTGAGAATGAGGTCACCTTTCCTGGGCTaGCTTTTACAACCACACTTGAAAGCAGGTCTCTTACACAACATG | + |
|
Preference number: 2 (lower is better) Translates to: SCTAQSVRMRSPFLG*LLQPHLKAGLLHNM Trigger: CATGTTGTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCTCACGGACTGTGCTGTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | CATTATAAAAAGGGGAGAGAGTGGGTTTCACTGTACCACCCTTACCCATGTACCAGGAGAATCCTTCGGTaGCTCTGGCTTCTGCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: HYKKGREWVSLYHPYPCTRRILR*LWLLLT Trigger: AGTCAGCAGAAGCCAGAGTCACCGAAGGATTCTCCT...GGTACATGGGTAAGGGTGGTACAGTGAAACCCACTCTCTCCCCTTTTTATAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR GCA 90 bp | TTAATATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCGGCTGGAGTGCAGCATaGGAGAAAAAGGGTTACTGT | + |
|
Preference number: 2 (lower is better) Translates to: LIFYAYNEQVEFCLSAPPGWSAA*EKKGYC Trigger: ACAGTAACCCTTTTTCTCGCATGCTGCACTCCAGCC...GGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATATTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGAATGAGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTTGAAAGCACCTACAACGAACAGGTaGAATTCTGCCTCTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VRMRSPFLGLLLQPHLKAPTTNR*NSASLP Trigger: GGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGG...TGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR TCA 90 bp | AGAATGAGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTTGAAAGCAGGTCAAGCTCTCTCTACCTaGTCAGGACAAGTCACACTG | + |
|
Preference number: 2 (lower is better) Translates to: RMRSPFLGLLLQPHLKAGQALST*SGQVTL Trigger: CAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTG...ACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR CCA 90 bp | ACAATGATGTACTTGGGTGTCAGGCCGATAAGAAACTTAAGTCAATTAAATGCCGCAGCTGGACCAGTGTaGGGCACATGGTACAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: TMMYLGVRPIRNLSQLNAAAGPV*GTWYRA Trigger: TGCTCTGTACCATGTGCCCCACACTGGTCCAGCTGC...GGCATTTAATTGACTTAAGTTTCTTATCGGCCTGACACCCAAGTACATCATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR TCA 90 bp | CAGACATCCCACCCAGGCCCACGCAGCAAACAGGAACATTTTCCTCAAGACTTTCATTCAATTCCCAAATaGGACAGGACAATTACTTTC | + |
|
Preference number: 2 (lower is better) Translates to: QTSHPGPRSKQEHFPQDFHSIPK*DRTITF Trigger: GAAAGTAATTGTCCTGTCTCATTTGGGAATTGAATG...AAAGTCTTGAGGAAAATGTTCCTGTTTGCTGCGTGGGCCTGGGTGGGATGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CAA 90 bp | GTGAGAATGAGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTaGAAAGCAGGTCTCTTACACAACATGGCTGAAAACGTGATACTT | + |
|
Preference number: 2 (lower is better) Translates to: VRMRSPFLGLLLQPH*KAGLLHNMAENVIL Trigger: AAGTATCACGTTTTCAGCCATGTTGTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR-3UTR CCA 90 bp | ATTACTTTCTTCTACATTATAAAAAGGGGAGAGAGTGGGTTTCACTGTACCACCCCTACAACGAACAGGTaGAATTCTGCCTCTCTGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ITFFYIIKRGESGFHCTTPTTNR*NSASLP Trigger: GGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGG...GGTGGTACAGTGAAACCCACTCTCTCCCCTTTTTATAATGTAGAAGAAAGTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CAA 90 bp | GCAACACACGATCTTAAAAGGCAAGTTGGTTCTACAATGATGTACTaGGGTGTCAGGCCGATAAGAAACTTAAGTCAATTAAATGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: ATHDLKRQVGSTMMY*GVRPIRNLSQLNAW Trigger: CCAGGCATTTAATTGACTTAAGTTTCTTATCGGCCTGACACCCAAGTACATCATTGTAGAACCAACTTGCCTTTTAAGATCGTGTGTTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR GCA 72 bp | GTACCCAGTACCAGTACCGAGCAGGAAGTGGGCACGTaGAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: VPSTSTEQEVGT*RSAWPQEEDPS Trigger: TGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGTACTGGGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| 3UTR GCA 72 bp | CTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTaGCCCTCCCCACATCCCACAGGCATGCCCATTGGG | + |
|
Preference number: 3 (lower is better) Translates to: LCLQRTGGILPL*PSPHPTGMPIG Trigger: CCCAATGGGCATGCCTGTGGGATGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 |
||
| 3UTR-3UTR CAA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAAGGTCAGGACAACGGTaGGGTGTGGGGACGCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YSMPTTNRWNSASLPLPTRSGQR*GVGTLP Trigger: AGGGAGCGTCCCCACACCCAACCGTTGTCCTGACCT...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR TCA 72 bp | CAGAAGGATGGCAGGCAGGAACTATGGACATTGAACTaGCCCCACAATGCGGAACCCAAGCTACCCACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: QKDGRQELWTLN*PHNAEPKLPTD Trigger: ATCAGTGGGTAGCTTGGGTTCCGCATTGTGGGGTCAGTTCAATGTCCATAGTTCCTGCCTGCCATCCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR GCA 72 bp | AGTGTGGGGCACATGGTACAGAGCAAGCTAAGCAACTaGCTTGTCTGTCCATCTAAGTGGCCTCACTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SVGHMVQSKLSN*LVCPSKWPHWT Trigger: TGTCCAGTGAGGCCACTTAGATGGACAGACAAGGCAGTTGCTTAGCTTGCTCTGTACCATGTGCCCCACACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR CCA 72 bp | ATGGCCATCAAGCAGCAATGGACCCTCACAGAAGGATaGCAGGCAGGAACTATGGACATTGAACTGACCCCA | + |
|
Preference number: 3 (lower is better) Translates to: MAIKQQWTLTEG*QAGTMDIELTP Trigger: TGGGGTCAGTTCAATGTCCATAGTTCCTGCCTGCCATCCTTCTGTGAGGGTCCATTGCTGCTTGATGGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CCA 72 bp | AGCAAGCTAAGCAACTGCCTTGTCTGTCCATCTAAGTaGCCTCACTGGACAGACTGTCAACAGTGGGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SKLSNCLVCPSK*PHWTDCQQWAV Trigger: CACAGCCCACTGTTGACAGTCTGTCCAGTGAGGCCACTTAGATGGACAGACAAGGCAGTTGCTTAGCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR GCA 72 bp | TTAATATTCTATGCCTACAACGAACAGGTGGAATTCTaGCTCTCTGCCCCTCCCCACATCCCACAGGCATGC | + |
|
Preference number: 3 (lower is better) Translates to: LIFYAYNEQVEF*LSAPPHIPQAC Trigger: GCATGCCTGTGGGATGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 |
||
| 3UTR CCA 72 bp | CCATCTAAGTGGCCTCACTGGACAGACTGTCAACAGTaGGCTGTGACATATGACCCGTCTCCAAATACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: PSKWPHWTDCQQ*AVTYDPSPNTV Trigger: CACTGTATTTGGAGACGGGTCATATGTCACAGCCCACTGTTGACAGTCTGTCCAGTGAGGCCACTTAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR CCA 72 bp | AGCAACTGCCTTGTCTGTCCATCTAAGTGGCCTCACTaGACAGACTGTCAACAGTGGGCTGTGACATATGAC | + |
|
Preference number: 3 (lower is better) Translates to: SNCLVCPSKWPH*TDCQQWAVTYD Trigger: GTCATATGTCACAGCCCACTGTTGACAGTCTGTCCAGTGAGGCCACTTAGATGGACAGACAAGGCAGTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR TCA 72 bp | GAACTGACCCCACAATGCGGAACCCAAGCTACCCACTaGTGCGTCACTTTAATACACACTTGGAAAGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: ELTPQCGTQATH*CVTLIHTWKAA Trigger: TGCAGCTTTCCAAGTGTGTATTAAAGTGACGCATCAGTGGGTAGCTTGGGTTCCGCATTGTGGGGTCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR TCA 72 bp | CCTAAGGGCCTTTTCCTGACAGGATTAACTGCTTCCTaGTTCCCAAACCCCTCAACAAGCAGCCTAATGCTC | + |
|
Preference number: 3 (lower is better) Translates to: PKGLFLTGLTAS*FPNPSTSSLML Trigger: GAGCATTAGGCTGCTTGTTGAGGGGTTTGGGAATCAGGAAGCAGTTAATCCTGTCAGGAAAAGGCCCTTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR GCA 72 bp | CTCATCCTCCATCTCCAGCTTGGCTGGAGTGCAGCATaGGAGAAAAAGGGTTACTGTAGAGTCACAGTAACT | + |
|
Preference number: 3 (lower is better) Translates to: LILHLQLGWSAA*EKKGYCRVTVT Trigger: AGTTACTGTGACTCTACAGTAACCCTTTTTCTCGCATGCTGCACTCCAGCCAAGCTGGAGATGGAGGATGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR CCA 72 bp | ATCAATGGTGTCCTCATCCTCCATCTCCAGCTTGGCTaGAGTGCAGCATGCGAGAAAAAGGGTTACTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: INGVLILHLQLG*SAACEKKGYCR Trigger: TCTACAGTAACCCTTTTTCTCGCATGCTGCACTCCAGCCAAGCTGGAGATGGAGGATGAGGACACCATTGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| 3UTR TCA 72 bp | AGTGGCCTCACTGGACAGACTGTCAACAGTGGGCTGTaGCATATGACCCGTCTCCAAATACAGTGTTTAACA | + |
|
Preference number: 3 (lower is better) Translates to: SGLTGQTVNSGL*HMTRLQIQCLT Trigger: TGTTAAACACTGTATTTGGAGACGGGTCATATGTCACAGCCCACTGTTGACAGTCTGTCCAGTGAGGCCACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR GCA 72 bp | CCACTGATGCGTCACTTTAATACACACTTGGAAAGCTaGACAGCACAGTCCGTGAGAATGAGGTCACCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLMRHFNTHLES*TAQSVRMRSPF Trigger: GAAAGGTGACCTCATTCTCACGGACTGTGCTGTGCAGCTTTCCAAGTGTGTATTAAAGTGACGCATCAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CCA 72 bp | TGTAGGTCAGTGTCAGGTGACTATAAAAGGCAGAGATaGCCATCAAGCAGCAATGGACCCTCACAGAAGGAT | + |
|
Preference number: 3 (lower is better) Translates to: CRSVSGDYKRQR*PSSSNGPSQKD Trigger: ATCCTTCTGTGAGGGTCCATTGCTGCTTGATGGCCATCTCTGCCTTTTATAGTCACCTGACACTGACCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR TCA 72 bp | AACCACAGTTCTAGGGATTGGACTCAGGCCATAGGGTaGGAATCTACATCCAGACCCAAGTTTGGGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: NHSSRDWTQAIG*ESTSRPKFGEK Trigger: TTTTTCCCCAAACTTGGGTCTGGATGTAGATTCTCACCCTATGGCCTGAGTCCAATCCCTAGAACTGTGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR TCA 72 bp | GGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTTaGAAGCAGGTCTCTTACACAACATGGCTGAAAACG | + |
|
Preference number: 3 (lower is better) Translates to: GHLSWACFYNHT*KQVSYTTWLKT Trigger: CGTTTTCAGCCATGTTGTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CCA 72 bp | TTAATGCACACATTCCTGCTGGATGAATTAGGTGCTTaGAGCTTGTGCTCGACTGATAGACTAACATGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LMHTFLLDELGA*SLCSTDRLTWL Trigger: GAGCCATGTTAGTCTATCAGTCGAGCACAAGCTCCAAGCACCTAATTCATCCAGCAGGAATGTGTGCATTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGTCAGTGTCAGGTGACTATAAAAGGCAGAGATGGCCATCAAGCAGCAATCTTTTACAACCACACTaGAAAGCAGGTCTCTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: CRSVSGDYKRQRWPSSSNLLQPH*KAGLLH Trigger: GTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAG...ATTGCTGCTTGATGGCCATCTCTGCCTTTTATAGTCACCTGACACTGACCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CCA 72 bp | CACAGGAGGAAGACCCCTCACTGTCTTAAGAAGCACTaGTCTTCCCCTTTAACTTACCATATGTTTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: HRRKTPHCLKKH*SSPLTYHMFDK Trigger: TTTGTCAAACATATGGTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTGAGGGGTCTTCCTCCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| 3UTR TCA 72 bp | TTGTGCTCGACTGATAGACTAACATGGCTCAGGCAATaGCAACCCTGGGTTTTATCTAACCTAAGTACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: LCSTDRLTWLRQ*QPWVLSNLSTE Trigger: TTCAGTACTTAGGTTAGATAAAACCCAGGGTTGTCATTGCCTGAGCCATGTTAGTCTATCAGTCGAGCACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR TCA 72 bp | CAATTAAATGCCTGGAGTGTTAATAAAGTTCACCTTTaGGTATCCCCTAAGGGCCTTTTCCTGACAGGATTA | + |
|
Preference number: 3 (lower is better) Translates to: QLNAWSVNKVHL*VSPKGLFLTGL Trigger: TAATCCTGTCAGGAAAAGGCCCTTAGGGGATACTCAAAGGTGAACTTTATTAACACTCCAGGCATTTAATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR TCA 72 bp | ATAATTATGTATCGAAAACAAGTACTAGAAGAAATCTaGGGCCACATTCAATTCCCAAATGAGACAGGACAA | + |
|
Preference number: 3 (lower is better) Translates to: IIMYRKQVLEEI*GHIQFPNETGQ Trigger: TTGTCCTGTCTCATTTGGGAATTGAATGTGGCCTCAGATTTCTTCTAGTACTTGTTTTCGATACATAATTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR TCA 90 bp | GCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACTGCTCCCTCGGGAGGCTaGTCCTCCTGTCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGHVQERLATGGRPLTAPSGG*SSCLLL Trigger: CAGCAGCAGACAGGAGGATCAGCCTCCCGAGGGAGC...AGTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CCA 90 bp | GCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACTGACAACGGTTGGGTGTaGGGACGCTCCCTCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGHVQERLATGGRPLTDNGWV*GRSLGR Trigger: CCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGTC...AGTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGACCCCTCACAGGCCTTCATCAGCTTaGTCAGTGGGGTGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKWARAGAPGHRRKTPHRPSSA*SVGCAS Trigger: AGAGGCACACCCCACTGAGCAAGCTGATGAAGGCCT...GTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| CDS-3UTR TCA 90 bp | GACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGGCTCCCTCGGGAGGCTaGTCCTCCTGTCTGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHKLSLPDQDKSHWRKPQAPSGG*SSCLLG Trigger: GCCCAGCAGACAGGAGGATCAGCCTCCCGAGGGAGC...CTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141228.9 |
||
| CDS-3UTR CCA 90 bp | TATTCTATGCCTACAACGAACAGGTGGAATTCTGCCTCTCTGCCCCTCCCCACAGACAACGGTTGGGTGTaGGGACGCTCCCTCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YSMPTTNRWNSASLPLPTDNGWV*GRSLGR Trigger: CCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGTC...TGTGGGGAGGGGCAGAGAGGCAGAATTCCACCTGTTCGTTGTAGGCATAGAATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 |
||
| CDS-3UTR CCA 90 bp | ATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCGACAACGGTTGGGTGTaGGGACGCTCCCTCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRTSHTGGNHSSRDWTQADNGWV*GRSLGR Trigger: CCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGTC...GGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | GGCAGAGATGGCCATCAAGCAGCAATGGACCCTCACAGAAGGATGGCAGGCAGGTTGCTCAGTGGGGTGTaGCTCTTGATCTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GRDGHQAAMDPHRRMAGRLLSGV*LLILNC Trigger: ACAGTTCAAGATCAAGAGGCACACCCCACTGAGCAA...CCTGCCTGCCATCCTTCTGTGAGGGTCCATTGCTGCTTGATGGCCATCTCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR GCA 90 bp | GGAGCGCCTGGCCACAGGAGGAAGACCCCTCACTGTCTTAAGAAGCACTGGTCTGCTGATCCTCCTGTCTaGTGCTGGAATACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GAPGHRRKTPHCLKKHWSADPPV*CWNTSM Trigger: CATTGATGTATTCCAGCAGCAGACAGGAGGATCAGC...AGACCAGTGCTTCTTAAGACAGTGAGGGGTCTTCCTCCTGTGGCCAGGCGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CCA 90 bp | CCTCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCCATCAGCTTGCTCAGTaGGGTGTGCCTCTTGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPHIPQACPLGNMTTSSLHQLAQ*GVPLDL Trigger: AAGATCAAGAGGCACACCCCACTGAGCAAGCTGATG...GAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR TCA 90 bp | CCTTCGGTGACTCTGGCTTCTGCTGACTCTTGTGTGATTGGGTGTGGCTGCATGCCGCCACTTTCAGGTTaGTGTGGTCATTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSVTLASADSCVIGCGCMPPLSG*CGHSLS Trigger: AGACAGAGAATGACCACATCAACCTGAAAGTGGCGG...CATGCAGCCACACCCAATCACACAAGAGTCAGCAGAAGCCAGAGTCACCGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | ATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCAGGCCTTCATCAGCTTaGTCAGTGGGGTGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRTSHTGGNHSSRDWTQARPSSA*SVGCAS Trigger: AGAGGCACACCCCACTGAGCAAGCTGATGAAGGCCT...GGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CCA 90 bp | CTACATTATAAAAAGGGGAGAGAGTGGGTTTCACTGTACCACCCTTACCCATGTGACAACGGTTGGGTGTaGGGACGCTCCCTCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHYKKGREWVSLYHPYPCDNGWV*GRSLGR Trigger: CCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGTC...ACATGGGTAAGGGTGGTACAGTGAAACCCACTCTCTCCCCTTTTTATAATGTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR TCA 90 bp | CAACAGACATCCCACCCAGGCCCACGCAGCAAACAGGAACATTTTCCTCAAGACCCGCCACTTTCAGGTTaGTGTGGTCATTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QQTSHPGPRSKQEHFPQDPPLSG*CGHSLS Trigger: AGACAGAGAATGACCACATCAACCTGAAAGTGGCGG...GTCTTGAGGAAAATGTTCCTGTTTGCTGCGTGGGCCTGGGTGGGATGTCTGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CCA 90 bp | TCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCAGATCCTCCTGTCTGCTaGGCTGGAGTGTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGQVTLEETTVLGIGLRPDPPVC*AGVSVS Trigger: TGAAACAGACACTCCAGCCCAGCAGACAGGAGGATC...TGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141228.9 |
||
| CDS-3UTR TCA 90 bp | ACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCATAGGGCCGCCACTTTCAGGTTaGTGTGGTCATTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSHTGGNHSSRDWTQAIGPPLSG*CGHSLS Trigger: AGACAGAGAATGACCACATCAACCTGAAAGTGGCGG...CCCTATGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTAGCTGATCCTCCTGTCTaGTGCTGGAATACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLADPPV*CWNTSM Trigger: CATTGATGTATTCCAGCAGCAGACAGGAGGATCAGC...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 |
||
| CDS-3UTR CCA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTATCCTGTCTGCTGGGCTaGAGTGTCTGTTTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLSCLLG*SVCFID Trigger: ATCAATGAAACAGACACTCCAGCCCAGCAGACAGGA...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAGACCCCTCACTGTCTTAAGAAGCACTGGTCTTCCCCTTTAACTTACCATAGGCCTTCATCAGCTTaGTCAGTGGGGTGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTPHCLKKHWSSPLTYHRPSSA*SVGCAS Trigger: AGAGGCACACCCCACTGAGCAAGCTGATGAAGGCCT...ATGGTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTGAGGGGTCTTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| CDS-3UTR GCA 90 bp | AATATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACAGGCCTTCATCAGCTTaGTCAGTGGGGTGTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NMTTSSLYLIRTSHTGGNRPSSA*SVGCAS Trigger: AGAGGCACACCCCACTGAGCAAGCTGATGAAGGCCT...GTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR CAA 72 bp | CCAAGCTACCCACTGATGCGTCACTTTAATACACACTaGGAAAGCTGCACAGCACAGTCCGTGAGAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSYPLMRHFNTH*ESCTAQSVRMR Trigger: CCTCATTCTCACGGACTGTGCTGTGCAGCTTTCCAAGTGTGTATTAAAGTGACGCATCAGTGGGTAGCTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR GCA 90 bp | AGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCATATTGCTCAGTGGGGTGTaGCTCTTGATCTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTSHTGGNHSSRDWTQAILLSGV*LLILNC Trigger: ACAGTTCAAGATCAAGAGGCACACCCCACTGAGCAA...TATGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | CTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCTGATCCTCCTGTCTaGTGCTGGAATACATCAATG | + |
|
Preference number: 4 (lower is better) Translates to: LIRTSHTGGNHSSRDWTQADPPV*CWNTSM Trigger: CATTGATGTATTCCAGCAGCAGACAGGAGGATCAGC...CTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 |
||
| 3UTR CAA 72 bp | GCACAGTCCGTGAGAATGAGGTCACCTTTCCTGGGCTaGCTTTTACAACCACACTTGAAAGCAGGTCTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AQSVRMRSPFLG*LLQPHLKAGLL Trigger: TAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCTCACGGACTGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| 3UTR CAA 72 bp | CACACATTCCTGCTGGATGAATTAGGTGCTTGGAGCTaGTGCTCGACTGATAGACTAACATGGCTCAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HTFLLDELGAWS*CSTDRLTWLRQ Trigger: TTGCCTGAGCCATGTTAGTCTATCAGTCGAGCACAAGCTCCAAGCACCTAATTCATCCAGCAGGAATGTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| CDS-3UTR TCA 90 bp | GTGAGAATGAGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTTGAAAGCACCGCCACTTTCAGGTTaGTGTGGTCATTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRMRSPFLGLLLQPHLKAPPLSG*CGHSLS Trigger: AGACAGAGAATGACCACATCAACCTGAAAGTGGCGG...TGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR GCA 90 bp | ACTGATACTTCACACTACACCCTGCCTCTAAAGCCCACCTTATCTTCACACACCTTGCTCAGTGGGGTGTaGCTCTTGATCTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDTSHYTLPLKPTLSSHTLLSGV*LLILNC Trigger: ACAGTTCAAGATCAAGAGGCACACCCCACTGAGCAA...GGTGTGTGAAGATAAGGTGGGCTTTAGAGGCAGGGTGTAGTGTGAAGTATCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| CDS-3UTR GCA 90 bp | TATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCATTGCTCAGTGGGGTGTaGCTCTTGATCTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: YDHKLSLPDQDKSHWRKPLLSGV*LLILNC Trigger: ACAGTTCAAGATCAAGAGGCACACCCCACTGAGCAA...TGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGGAAGACCCCTCACTGTCTTAAGAAGCACTGGTCTTCCCCTTTAACTTACTTGCTCAGTGGGGTGTaGCTCTTGATCTTGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RRKTPHCLKKHWSSPLTYLLSGV*LLILNC Trigger: ACAGTTCAAGATCAAGAGGCACACCCCACTGAGCAA...GTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTGAGGGGTCTTCCTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| CDS-3UTR CCA 90 bp | CTTGGAAAGCTGCACAGCACAGTCCGTGAGAATGAGGTCACCTTTCCTGGGCTTACTTTCAGGTTGATGTaGTCATTCTCTGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGKLHSTVRENEVTFPGLTFRLM*SFSVFT Trigger: TGTGAAGACAGAGAATGACCACATCAACCTGAAAGT...AAGCCCAGGAAAGGTGACCTCATTCTCACGGACTGTGCTGTGCAGCTTTCCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CCA 90 bp | TACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTGTCAGAGCTAAGAACTaGGCTGGAGTGTCTGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLIRTSHTGGNHSSRDWTVRAKN*AGVSVS Trigger: TGAAACAGACACTCCAGCCCAGTTCTTAGCTCTGAC...AGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137841.9 |
||
| CDS-3UTR CCA 90 bp | ACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCATAGGGACTTTCAGGTTGATGTaGTCATTCTCTGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSHTGGNHSSRDWTQAIGTFRLM*SFSVFT Trigger: TGTGAAGACAGAGAATGACCACATCAACCTGAAAGT...CCCTATGGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CCA 90 bp | CTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGACTTTCAGGTTGATGTaGTCATTCTCTGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: LIRTSHTGGNHSSRDWTQTFRLM*SFSVFT Trigger: TGTGAAGACAGAGAATGACCACATCAACCTGAAAGT...CTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR CAA 72 bp | AGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTaGAAAGCAGGTCTCTTACACAACATGGCTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPFLGLLLQPH*KAGLLHNMAEN Trigger: GTTTTCAGCCATGTTGTGTAAGAGACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CCA 90 bp | TACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTACTTTCAGGTTGATGTaGTCATTCTCTGTCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLIRTSHTGGNHSSRDWTTFRLM*SFSVFT Trigger: TGTGAAGACAGAGAATGACCACATCAACCTGAAAGT...AGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| 3UTR CAA 72 bp | GATCTTAAAAGGCAAGTTGGTTCTACAATGATGTACTaGGGTGTCAGGCCGATAAGAAACTTAAGTCAATTA | + |
|
Preference number: 4 (lower is better) Translates to: DLKRQVGSTMMY*GVRPIRNLSQL Trigger: TAATTGACTTAAGTTTCTTATCGGCCTGACACCCAAGTACATCATTGTAGAACCAACTTGCCTTTTAAGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| 3UTR CAA 72 bp | TTTAGAGTGAGCTCTCAGAGACAGACTAAATGTGTTTaGTACTATGCAACACACGATCTTAAAAGGCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRVSSQRQTKCV*YYATHDLKRQV Trigger: AACTTGCCTTTTAAGATCGTGTGTTGCATAGTACAAAACACATTTAGTCTGTCTCTGAGAGCTCACTCTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020501.15 |
||
| CDS-3UTR CAA 90 bp | TACCAGTACCGAGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAGTGTGCCTCTTGATCTaGAACTGTACCACCGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YQYRAGSGHVQERLATGGVCLLI*NCTTEP Trigger: TGGCTCGGTGGTACAGTTCAAGATCAAGAGGCACAC...TCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| CDS-3UTR CAA 90 bp | TACCAGTACCGAGCAGGAAGTGGGCACGTGCAGGAGCGCCTGGCCACAGGAGGAAGTGGGGTGTGCCTCTaGATCTTGAACTGTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: YQYRAGSGHVQERLATGGSGVCL*ILNCTT Trigger: GGTGGTACAGTTCAAGATCAAGAGGCACACCCCACT...TCCTCCTGTGGCCAGGCGCTCCTGCACGTGCCCACTTCCTGCTCGGTACTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000173691.2 |
||
| CDS-3UTR CAA 90 bp | GACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGAGGTCAGGACAACGGTaGGGTGTGGGGACGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DHKLSLPDQDKSHWRKPQRSGQR*GVGTLP Trigger: AGGGAGCGTCCCCACACCCAACCGTTGTCCTGACCT...CTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCGGTGACTCTGGCTTCTGCTGACTCTTGTGTGATTGGGTGTGGCTGCATGATCGAATCTGCCTCATaGACAAGCCCTGCCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSVTLASADSCVIGCGCMIESAS*TSPASH Trigger: GTGAGAGGCAGGGCTTGTCAATGAGGCAGATTCGAT...CATGCAGCCACACCCAATCACACAAGAGTCAGCAGAAGCCAGAGTCACCGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | TACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTAGGTCAGGACAACGGTaGGGTGTGGGGACGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: YLIRTSHTGGNHSSRDWTRSGQR*GVGTLP Trigger: AGGGAGCGTCCCCACACCCAACCGTTGTCCTGACCT...AGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000124024.3 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTACCCGCCACTTTCAGGTaGATGTGGTCATTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLPATFR*MWSFSV Trigger: GACAGAGAATGACCACATCAACCTGAAAGTGGCGGG...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | TCCCCACATCCCACAGGCATGCCCATTGGGGAATATGACCACAAGCTCTCTCTAAGTGGGGTGTGCCTCTaGATCTTGAACTGTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: SPHPTGMPIGEYDHKLSLSGVCL*ILNCTT Trigger: GGTGGTACAGTTCAAGATCAAGAGGCACACCCCACT...TAGAGAGAGCTTGTGGTCATATTCCCCAATGGGCATGCCTGTGGGATGTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | TGTAGGTCAGTGTCAGGTGACTATAAAAGGCAGAGATGGCCATCAAGCAGCAATAGGTCAGGACAACGGTaGGGTGTGGGGACGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: CRSVSGDYKRQRWPSSSNRSGQR*GVGTLP Trigger: AGGGAGCGTCCCCACACCCAACCGTTGTCCTGACCT...ATTGCTGCTTGATGGCCATCTCTGCCTTTTATAGTCACCTGACACTGACCTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CAA 90 bp | CAGACATCCCACCCAGGCCCACGCAGCAAACAGGAACATTTTCCTCAAGACTTTCCCGCCACTTTCAGGTaGATGTGGTCATTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: QTSHPGPRSKQEHFPQDFPATFR*MWSFSV Trigger: GACAGAGAATGACCACATCAACCTGAAAGTGGCGGG...AAAGTCTTGAGGAAAATGTTCCTGTTTGCTGCGTGGGCCTGGGTGGGATGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CAA 90 bp | ATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCCCCGCCACTTTCAGGTaGATGTGGTCATTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IRTSHTGGNHSSRDWTQAPATFR*MWSFSV Trigger: GACAGAGAATGACCACATCAACCTGAAAGTGGCGGG...GGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | ATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGACTCAGGCCAGTGGGGTGTGCCTCTaGATCTTGAACTGTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: IRTSHTGGNHSSRDWTQASGVCL*ILNCTT Trigger: GGTGGTACAGTTCAAGATCAAGAGGCACACCCCACT...GGCCTGAGTCCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | GACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGATCGAATCTGCCTCATaGACAAGCCCTGCCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: DHKLSLPDQDKSHWRKPQIESAS*TSPASH Trigger: GTGAGAGGCAGGGCTTGTCAATGAGGCAGATTCGAT...CTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | AAGACCCCTCACTGTCTTAAGAAGCACTGGTCTTCCCCTTTAACTTACCATATGAGGTCAGGACAACGGTaGGGTGTGGGGACGCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: KTPHCLKKHWSSPLTYHMRSGQR*GVGTLP Trigger: AGGGAGCGTCCCCACACCCAACCGTTGTCCTGACCT...CATATGGTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTGAGGGGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CAA 90 bp | CTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCACAGTTCTAGGGATTGGAGTGGGGTGTGCCTCTaGATCTTGAACTGTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: LYLIRTSHTGGNHSSRDWSGVCL*ILNCTT Trigger: GGTGGTACAGTTCAAGATCAAGAGGCACACCCCACT...CCAATCCCTAGAACTGTGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | TATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCAAGTGGGGTGTGCCTCTaGATCTTGAACTGTACCACC | + |
|
Preference number: 5 (lower is better) Translates to: YDHKLSLPDQDKSHWRKPSGVCL*ILNCTT Trigger: GGTGGTACAGTTCAAGATCAAGAGGCACACCCCACT...TGGTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | AATATGACCACAAGCTCTCTCTACCTGATCAGGACAAGTCACACTGGAGGAAACCCCGCCACTTTCAGGTaGATGTGGTCATTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: NMTTSSLYLIRTSHTGGNPATFR*MWSFSV Trigger: GACAGAGAATGACCACATCAACCTGAAAGTGGCGGG...GTTTCCTCCAGTGTGACTTGTCCTGATCAGGTAGAGAGAGCTTGTGGTCATATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||
| CDS-3UTR CAA 90 bp | AGAATGAGGTCACCTTTCCTGGGCTTGCTTTTACAACCACACTTGAAAGCAGGTATCGAATCTGCCTCATaGACAAGCCCTGCCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: RMRSPFLGLLLQPHLKAGIESAS*TSPASH Trigger: GTGAGAGGCAGGGCTTGTCAATGAGGCAGATTCGAT...ACCTGCTTTCAAGTGTGGTTGTAAAAGCAAGCCCAGGAAAGGTGACCTCATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS-3UTR CAA 90 bp | CACTGTCTTAAGAAGCACTGGTCTTCCCCTTTAACTTACCATATGTTTGACAAAATCGAATCTGCCTCATaGACAAGCCCTGCCTCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HCLKKHWSSPLTYHMFDKIESAS*TSPASH Trigger: GTGAGAGGCAGGGCTTGTCAATGAGGCAGATTCGAT...TTTGTCAAACATATGGTAAGTTAAAGGGGAAGACCAGTGCTTCTTAAGACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 |
||
| CDS TCA 72 bp | ACAACGGTTGGGTGTGGGGACGCTCCCTCGGGAGGCTaGTCCTCCTGTCTGCTGGGCTGGAGTGTCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TTVGCGDAPSGG*SSCLLGWSVCF Trigger: GAAACAGACACTCCAGCCCAGCAGACAGGAGGATCAGCCTCCCGAGGGAGCGTCCCCACACCCAACCGTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141228.9 |
||
| CDS GCA 72 bp | TGCCTCTTGATCTTGAACTGTACCACCGAGCCATCCTaGCCCGCCACTTTCAGGTTGATGTGGTCATTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CLLILNCTTEPS*PATFRLMWSFS Trigger: AGAGAATGACCACATCAACCTGAAAGTGGCGGGGCAGGATGGCTCGGTGGTACAGTTCAAGATCAAGAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000020501.15 ENSMUST00000099538.6 ENSMUST00000129492.8 ENSMUST00000137841.9 ENSMUST00000141228.9 |
||