Pregenerated sensors for SUMO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000026021

Ensembl transcript IDs: ENSMUST00000091374.9, ENSMUST00000185265.2

Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 72 bp	AGTGAAGCAACCACATGCTGGAACTTCAGAGCCAATTaGAAGGTCATAGGAAAGCTCCCATTGGTCGATCTT	+
Preference number: 3 (lower is better) Translates to: SEATTCWNFRAN*KVIGKLPLVDL Trigger: AAGATCGACCAATGGGAGCTTTCCTATGACCTTTCAATTGGCTCTGAAGTTCCAGCATGTGGTTGCTTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091374.9
CDS-3UTR CAA 90 bp	AAATCTCTTAAAGGAAAAAGGGCAGTATTAAGGGAGCTGAGGTCTGATCACCAACCCTGTCCAATAACTTaGAGTTTAATGTATTCTCCT	+
Preference number: 5 (lower is better) Translates to: KSLKGKRAVLRELRSDHQPCPIT*SLMYSP Trigger: AGGAGAATACATTAAACTCAAAGTTATTGGACAGGG...TTGGTGATCAGACCTCAGCTCCCTTAATACTGCCCTTTTTCCTTTAAGAGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185265.2

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu