Pregenerated sensors for SUMF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025538Ensembl transcript IDs: ENSMUST00000137357.5, ENSMUST00000171300.8, ENSMUST00000201874.4
Found 113 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GACCCTTCAAGCCCCCTCGGGCTGCAAACTCCCACTCCTCTTCTGTaGGCAAGCGTCTCCCCCGCCATGCGCAGTAAGCACCAGCGTCGT | + |
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Preference number: 1 (lower is better) Translates to: DPSSPLGLQTPTPLL*ASVSPAMRSKHQRR Trigger: ACGACGCTGGTGCTTACTGCGCATGGCGGGGGAGACGCTTGCCCACAGAAGAGGAGTGGGAGTTTGCAGCCCGAGGGGGCTTGAAGGGTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR CCA 90 bp | ATCTCGGTCTGGCTGCTCACAGGTCCTCCTTCGGTCGGCCTGCACTaGAGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTGAGTCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: ISVWLLTGPPSVGLH*RRSGSPGCLRLSLE Trigger: CTCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCTCCAGTGCAGGCCGACCGAAGGAGGACCTGTGAGCAGCCAGACCGAGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR TCA 90 bp | TTGGTAGCCAGCTGCCTCTGGAACATGGTCACGGAGGTACAGTGCTaGGAGGGTGCTTCGGAGATCTCGGTCTGGCTGCTCACAGGTCCT | + |
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Preference number: 1 (lower is better) Translates to: LVASCLWNMVTEVQC*EGASEISVWLLTGP Trigger: AGGACCTGTGAGCAGCCAGACCGAGATCTCCGAAGCACCCTCTCAGCACTGTACCTCCGTGACCATGTTCCAGAGGCAGCTGGCTACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR GCA 90 bp | TTGGTCATCCAGGTCCTCATCTTCCAGGCTACTGCAGTCCCTTCTTaGAGTCCGAGTGTTCTTTGTGTCTGTCAGAGGGGAGGGGCTCAA | + |
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Preference number: 1 (lower is better) Translates to: LVIQVLIFQATAVPS*SPSVLCVCQRGGAQ Trigger: TTGAGCCCCTCCCCTCTGACAGACACAAAGAACACTCGGACTGCAAGAAGGGACTGCAGTAGCCTGGAAGATGAGGACCTGGATGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR TCA 90 bp | GTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTTA | + |
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Preference number: 1 (lower is better) Translates to: VPATTWWLTTIRNEI*CPLLVCLKTATVYL Trigger: TAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR CCA 90 bp | CCACATATTGAGTATCTCGTTTCAGAGGCCAGCGAGGCTAGGTTCTaGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: PHIEYLVSEASEARF*QQGFGTPHKGSIFL Trigger: AAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTCGCTGGCCTCTGAAACGAGATACTCAATATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR TCA 90 bp | CAAACAACAATTATATTGTGCTTCCTGATATACATAAGAATTTATTaGCCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGAC | + |
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Preference number: 1 (lower is better) Translates to: QTTIILCFLIYIRIY*PRAGVMAQWVRVPD Trigger: GTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATTCTTATGTATATCAGGAAGCACAATATAATTGTTGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR TCA 90 bp | GTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGCTACATaGAACCCTATCTCAAACAACAATTATATTGTGCTTCCTGATATA | + |
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Preference number: 1 (lower is better) Translates to: VICGYTRSLRLAWAT*NPISNNNYIVLPDI Trigger: TATATCAGGAAGCACAATATAATTGTTGTTTGAGATAGGGTTTCATGTAGCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR TCA 90 bp | GCAAGAACAGGCGCTCATAACTGTCTAGCTAAAGTTATGGATATTTaGGGAAGTGAAAGCAGGAGTTCAAGGTCATTTGTGGCTACACAA | + |
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Preference number: 1 (lower is better) Translates to: ARTGAHNCLAKVMDI*GSESRSSRSFVATQ Trigger: TTGTGTAGCCACAAATGACCTTGAACTCCTGCTTTCACTTCCTCAAATATCCATAACTTTAGCTAGACAGTTATGAGCGCCTGTTCTTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR CAA 90 bp | TCCTCCTTCGGTCGGCCTGCACTGGAGGCGCAGCGGAAGCCCAGGTaGTCTGAGGCTGAGTCTGGAGTGTTTCCCATCCTGGTGGTGACC | + |
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Preference number: 2 (lower is better) Translates to: SSFGRPALEAQRKPR*SEAESGVFPILVVT Trigger: GGTCACCACCAGGATGGGAAACACTCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCTCCAGTGCAGGCCGACCGAAGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTGAGTCTGGAGTGTTTCCCATCCCCCACTCCTCTTCTGTaGGCAAGCGTCTCCCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: RRSGSPGCLRLSLECFPSPTPLL*ASVSPA Trigger: GGCGGGGGAGACGCTTGCCCACAGAAGAGGAGTGGG...GGATGGGAAACACTCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTGAGTCTGGAGTGTTTCCCATCCCCTGCCATAAGTTGGTaGGGTTTGGCTGGAACCGGT | + |
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Preference number: 2 (lower is better) Translates to: RRSGSPGCLRLSLECFPSPAISW*GLAGTG Trigger: ACCGGTTCCAGCCAAACCGCACCAACTTATGGCAGG...GGATGGGAAACACTCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR CCA 90 bp | TTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCATCGGTCGGCCTGCACTaGAGGCGCAGCGGAAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LSLILHLRDSPAPSLGHPSVGLH*RRSGSP Trigger: TGGGCTTCCGCTGCGCCTCCAGTGCAGGCCGACCGA...TGGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR TCA 90 bp | TTGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCCCCAGAAGTGAAAGCTaGACCAGCCAGGGAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSGWCDGSVGKSTRLLFPRSES*TSQGES Trigger: GCTTTCTCCCTGGCTGGTTCAGCTTTCACTTCTGGG...GAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR CAA 90 bp | CTTGGTCATCCAGGTCCTCATCTTCCAGGCTACTGCAGTCCCTTCTaGCAGTCCGAGTGTTCTTTGTGTCTGTCAGAGGGGAGGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: LGHPGPHLPGYCSPF*QSECSLCLSEGRGS Trigger: TGAGCCCCTCCCCTCTGACAGACACAAAGAACACTCGGACTGCAAGAAGGGACTGCAGTAGCCTGGAAGATGAGGACCTGGATGACCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGAGTTCAAGGTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGCTTATTGACCTCGGGCTaGTGTGATGGCTCAGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: AGVQGHLWLHKELEASLGLLTSG*CDGSVG Trigger: ACCCACTGAGCCATCACACCAGCCCGAGGTCAATAA...GCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCAAGTCCCAGCAACCACATGGTGGCTCACAACCATCCGTAACGAGATCTAGCTTGGTAGCCAGCTaGCTCTGGAACATGGTCACG | + |
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Preference number: 2 (lower is better) Translates to: VFKSQQPHGGSQPSVTRSSLVAS*LWNMVT Trigger: CGTGACCATGTTCCAGAGGCAGCTGGCTACCAAGCT...AGATCTCGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGACTTGAACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTTCGAGACCAGCCTTGCCACATATTGAGTATCTCGTTTCAGAGGCCAGCGGTAGCCAGCTGCCTCTaGAACATGGTCACGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: RVRDQPCHILSISFQRPAVASCL*NMVTEV Trigger: TACCTCCGTGACCATGTTCCAGAGGCAGCTGGCTAC...CGCTGGCCTCTGAAACGAGATACTCAATATGTGGCAAGGCTGGTCTCGAACTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGGAGTTCAAGGTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGTAGCCAGCTGCCTCTaGAACATGGTCACGGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: KQEFKVICGYTRSLRLAWVASCL*NMVTEV Trigger: TACCTCCGTGACCATGTTCCAGAGGCAGCTGGCTAC...CCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGGTTCTGGCATTTGTCTTCCTAGAGGGGCACTGACTTTGGTTCTCCCACAACCCAGAAGTGAAAGCTaGACCAGCCAGGGAGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: EGSGICLPRGALTLVLPQPRSES*TSQGES Trigger: GCTTTCTCCCTGGCTGGTTCAGCTTTCACTTCTGGG...TTGTGGGAGAACCAAAGTCAGTGCCCCTCTAGGAAGACAAATGCCAGAACCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR GCA 90 bp | TTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCAAGCTTGGTAGCCAGCTaGCTCTGGAACATGGTCACG | + |
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Preference number: 2 (lower is better) Translates to: LSLILHLRDSPAPSLGHPSLVAS*LWNMVT Trigger: CGTGACCATGTTCCAGAGGCAGCTGGCTACCAAGCT...TGGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTCTGGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCCTTCTGCAGCAGGTTGGTATGTaGACGCTGTCCACTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: RFWQQGFGTPHKGSIFLLQQVGM*TLSTPT Trigger: TGTGGGAGTGGACAGCGTCCACATACCAACCTGCTG...CAGAAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR CAA 90 bp | ATCTCGTTTCAGAGGCCAGCGAGGCTAGGTTCTGGCAGCAAGGCTTaGGCACACCTCACAAAGGAAGCATTTTCCTTCTGCAGAATTTCC | + |
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Preference number: 2 (lower is better) Translates to: ISFQRPARLGSGSKA*AHLTKEAFSFCRIS Trigger: GGAAATTCTGCAGAAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTCGCTGGCCTCTGAAACGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCCTTCTGCAGAATTTCCCAGAAGTGAAAGCTGAACCAGCCAGGGAGAAACAAGCCCCCTCGGGCTaGAAACTCCCACTCCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: IFLLQNFPEVKAEPAREKQAPSG*KLPLLF Trigger: GAAGAGGAGTGGGAGTTTGCAGCCCGAGGGGGCTTG...TTTCTCCCTGGCTGGTTCAGCTTTCACTTCTGGGAAATTCTGCAGAAGGAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATAGCCTTGCCACATATTaGGTATCTCGTTTCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSSSSGTCLQDTQKALHDSLATY*VSRFRG Trigger: GCCTCTGAAACGAGATACTCAATATGTGGCAAGGCT...ATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | TTTATTGACCTCATAAGATCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACCCAGCTCCCAGCCTTaGTCATCCAGGTCCTCATCT | + |
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Preference number: 2 (lower is better) Translates to: FIDLIRSSSSSGTCLQDTPSSQP*SSRSSS Trigger: AGATGAGGACCTGGATGACCAAGGCTGGGAGCTGGG...TGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGATCTTATGAGGTCAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR TCA 90 bp | TCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTAAATAGTGGGCGTGGTACGGAGGTACAGTGCTaGGAGGGTGCTTCGGAGATC | + |
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Preference number: 2 (lower is better) Translates to: SSLHKSFALLGLLNSGRGTEVQC*EGASEI Trigger: GATCTCCGAAGCACCCTCTCAGCACTGTACCTCCGT...ACCACGCCCACTATTTAAAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATGGATATTTGAGGAAGTaGAAGCAGGAGTTCAAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SSSSSGTCLQDTQKALHDGYLRK*KQEFKV Trigger: GACCTTGAACTCCTGCTTTCACTTCCTCAAATATCC...ATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | ATTTTCCTTCTGCAGAATTTCCCAGAAGTGAAAGCTGAACCAGCCAGGGAGAAACAGCTTTGTCACCTTTaGGGAACTTTCCCTGCCATA | + |
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Preference number: 2 (lower is better) Translates to: IFLLQNFPEVKAEPAREKQLCHL*GTFPAI Trigger: TATGGCAGGGAAAGTTCCCCAAAGGTGACAAAGCTG...TTTCTCCCTGGCTGGTTCAGCTTTCACTTCTGGGAAATTCTGCAGAAGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR CCA 90 bp | CTCATAAGATCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCTCATCTTTTGGACACTaGAGGGTTTGGTTCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: LIRSSSSSGTCLQDTQKASSFGH*RVWFLC Trigger: ACAAAGGAACCAAACCCTCCAGTGTCCAAAAGATGA...GGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGATCTTATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR CAA 90 bp | CTCAGAGAAGGTTCTGGCATTTGTCTTCCTAGAGGGGCACTGACTTaGGTTCTCCCACAATGCACATCTTCACTTCATAAATCATTTGCT | + |
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Preference number: 2 (lower is better) Translates to: LREGSGICLPRGALT*VLPQCTSSLHKSFA Trigger: AGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAGAACCAAAGTCAGTGCCCCTCTAGGAAGACAAATGCCAGAACCTTCTCTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCCACAATGCACATCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTCCGTAGTTGTTCTGTaGGGGGAAAGCGTTCACTGG | + |
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Preference number: 2 (lower is better) Translates to: FSHNAHLHFINHLLYWGFSVVVL*GESVHW Trigger: CCAGTGAACGCTTTCCCCCCACAGAACAACTACGGA...AAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCCCACAATGCACATCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTACTGGTGACAGTCCATaGAAACCATCTTCAGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VLPQCTSSLHKSFALLGLTGDSP*KPSSAL Trigger: CAAAGCTGAAGATGGTTTTCATGGACTGTCACCAGT...AAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR CAA 90 bp | TCAAACAACAATTATATTGTGCTTCCTGATATACATAAGAATTTATaGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGA | + |
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Preference number: 2 (lower is better) Translates to: SNNNYIVLPDIHKNL*TSGWCDGSVGKSTR Trigger: TCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATTCTTATGTATATCAGGAAGCACAATATAATTGTTGTTTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCCCACAATGCACATCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTCATCTTTTGGACACTaGAGGGTTTGGTTCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: VLPQCTSSLHKSFALLGLSSFGH*RVWFLC Trigger: ACAAAGGAACCAAACCCTCCAGTGTCCAAAAGATGA...AAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR CCA 72 bp | TGGCTGCTCACAGGTCCTCCTTCGGTCGGCCTGCACTaGAGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: WLLTGPPSVGLH*RRSGSPGCLRL Trigger: CAGCCTCAGACAACCTGGGCTTCCGCTGCGCCTCCAGTGCAGGCCGACCGAAGGAGGACCTGTGAGCAGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR TCA 72 bp | AGCTGCCTCTGGAACATGGTCACGGAGGTACAGTGCTaGGAGGGTGCTTCGGAGATCTCGGTCTGGCTGCTC | + |
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Preference number: 3 (lower is better) Translates to: SCLWNMVTEVQC*EGASEISVWLL Trigger: GAGCAGCCAGACCGAGATCTCCGAAGCACCCTCTCAGCACTGTACCTCCGTGACCATGTTCCAGAGGCAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR GCA 72 bp | CTGGAACATGGTCACGGAGGTACAGTGCTGAGAGGGTaGTTCGGAGATCTCGGTCTGGCTGCTCACAGGTCC | + |
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Preference number: 3 (lower is better) Translates to: LEHGHGGTVLRG*FGDLGLAAHRS Trigger: GGACCTGTGAGCAGCCAGACCGAGATCTCCGAAGCACCCTCTCAGCACTGTACCTCCGTGACCATGTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR CAA 90 bp | AGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTGAGTCTGGAGTGTTTCCCATCCTTTCCCTGCCATAAGTaGGTGCGGTTTGGCTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RRSGSPGCLRLSLECFPSFPCHK*VRFGWN Trigger: GTTCCAGCCAAACCGCACCAACTTATGGCAGGGAAA...GGATGGGAAACACTCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR GCA 72 bp | CCATGGATAAACCTGACCCTTCAAGCCCCCTCGGGCTaGAAACTCCCACTCCTCTTCTGTGGGCAAGCGTCT | + |
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Preference number: 3 (lower is better) Translates to: PWINLTLQAPSG*KLPLLFCGQAS Trigger: AGACGCTTGCCCACAGAAGAGGAGTGGGAGTTTGCAGCCCGAGGGGGCTTGAAGGGTCAGGTTTATCCATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR-3UTR CAA 90 bp | GCATGTCCTGGCCAGCAGGTTGGTATGTGGACGCTGTCCACTCCCACACATTGCTCAGCTTTGTCACCTTaGGGGAACTTTCCCTGCCAT | + |
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Preference number: 3 (lower is better) Translates to: ACPGQQVGMWTLSTPTHCSALSP*GNFPCH Trigger: ATGGCAGGGAAAGTTCCCCAAAGGTGACAAAGCTGA...GCAATGTGTGGGAGTGGACAGCGTCCACATACCAACCTGCTGGCCAGGACATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR CCA 72 bp | GAGTATCTCGTTTCAGAGGCCAGCGAGGCTAGGTTCTaGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGC | + |
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Preference number: 3 (lower is better) Translates to: EYLVSEASEARF*QQGFGTPHKGS Trigger: GCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTCGCTGGCCTCTGAAACGAGATACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCCAGCGGAAGCCCAGGTaGTCTGAGGCTGAGTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: FVLNTALKRQPSSQPWSSQRKPR*SEAESG Trigger: TCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTG...GGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR GCA 72 bp | CAGGTCCTCATCTTCCAGGCTACTGCAGTCCCTTCTTaGAGTCCGAGTGTTCTTTGTGTCTGTCAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: QVLIFQATAVPS*SPSVLCVCQRG Trigger: TCCCCTCTGACAGACACAAAGAACACTCGGACTGCAAGAAGGGACTGCAGTAGCCTGGAAGATGAGGACCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| 3UTR GCA 72 bp | GCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTaGTCTTCCAAAGGTCCAGTGTTCAAGTCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: AGVMAQWVRVPD*SSKGPVFKSQQ Trigger: TTGCTGGGACTTGAACACTGGACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| 3UTR-3UTR CAA 90 bp | TTTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCATAAGTTGGTGCGGTTaGGCTGGAACCGGTTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: FVLNTALKRQPSSQPWSSISWCG*AGTGSP Trigger: GGGGGAACCGGTTCCAGCCAAACCGCACCAACTTAT...GGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATTAGCCTCAGACGCATGAGCTaGGTAGCCAGCTGCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLQGHVCRIHRRPYMISLRRMS*VASCLW Trigger: CCAGAGGCAGCTGGCTACCAAGCTCATGCGTCTGAG...GCTAATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| 3UTR GCA 72 bp | TGTCACCTTTGGGGAACTTTCCCTGCCATAAGTTGGTaGGGTTTGGCTGGAACCGGTTCCCCCATGGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CHLWGTFPAISW*GLAGTGSPMDK Trigger: TTTATCCATGGGGGAACCGGTTCCAGCCAAACCGCACCAACTTATGGCAGGGAAAGTTCCCCAAAGGTGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATTAGCCAGTCCGAGTGTTCTTaGTGTCTGTCAGAGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VLLQGHVCRIHRRPYMISQSECS*CLSEGR Trigger: CCTCCCCTCTGACAGACACAAAGAACACTCGGACTG...GCTAATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| 3UTR CCA 72 bp | TTTGAGGAAGTGAAAGCAGGAGTTCAAGGTCATTTGTaGCTACACAAGGAGCTTGAGGCTAGCCTGGGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: FEEVKAGVQGHL*LHKELEASLGY Trigger: GTAGCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGCTTTCACTTCCTCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCTAGGTTCTGGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCAAACCATCTTCAGCTTaGTCACCTTTGGGGAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: EARFWQQGFGTPHKGSIFKPSSA*SPLGNF Trigger: AAAGTTCCCCAAAGGTGACAAAGCTGAAGATGGTTT...GAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| 3UTR-3UTR CAA 90 bp | TTTATTGACCTCATAAGATCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACAGGCTACACAAGGAGCTaGAGGCTAGCCTGGGCTACA | + |
|
Preference number: 3 (lower is better) Translates to: FIDLIRSSSSSGTCLQDTGYTRS*RLAWAT Trigger: TGTAGCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCC...TGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGATCTTATGAGGTCAATAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR TCA 72 bp | AGGGACATGTCTGCAGGATACACAGAAGGCCCTACATaGTTAGCTAACTCTCAGAGAAGGTTCTGGCATTTG | + |
|
Preference number: 3 (lower is better) Translates to: RDMSAGYTEGPT*LANSQRRFWHL Trigger: CAAATGCCAGAACCTTCTCTGAGAGTTAGCTAATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| 3UTR CCA 72 bp | CTTCCTGATATACATAAGAATTTATTGACCTCGGGCTaGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTG | + |
|
Preference number: 3 (lower is better) Translates to: LPDIHKNLLTSG*CDGSVGKSTRL Trigger: CAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATTCTTATGTATATCAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR TCA 72 bp | GGCTACACAAGGAGCTTGAGGCTAGCCTGGGCTACATaGAACCCTATCTCAAACAACAATTATATTGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: GYTRSLRLAWAT*NPISNNNYIVL Trigger: AAGCACAATATAATTGTTGTTTGAGATAGGGTTTCATGTAGCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR GCA 72 bp | GTTTTAGCTGCATGCATTTTATGTAACCCACATGCATaGAGTACCTGTAGAGGTCACAAGAAGGCATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLAACILCNPHA*STCRGHKKASE Trigger: TTCTGATGCCTTCTTGTGACCTCTACAGGTACTGCATGCATGTGGGTTACATAAAATGCATGCAGCTAAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR TCA 72 bp | GGCGCTCATAACTGTCTAGCTAAAGTTATGGATATTTaGGGAAGTGAAAGCAGGAGTTCAAGGTCATTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: GAHNCLAKVMDI*GSESRSSRSFV Trigger: CACAAATGACCTTGAACTCCTGCTTTCACTTCCTCAAATATCCATAACTTTAGCTAGACAGTTATGAGCGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCAAGCCCCCTCGGGCTGCAAACTCCCACTCCTCTTCTGTGGGCAAGCGTTGGGCATGTCCTAGCTaGAGCCTGGGGCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFKPPRAANSHSSSVGKRWACPS*SLGQDR Trigger: CCTGTCCTGCCCCAGGCTTCAGCTAGGACATGCCCA...ACGCTTGCCCACAGAAGAGGAGTGGGAGTTTGCAGCCCGAGGGGGCTTGAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR GCA 90 bp | CTCCCACTCCTCTTCTGTGGGCAAGCGTCTCCCCCGCCATGCGCAGTAAGCACCGCCCTTCACCGTCTCTaGCATCTGGAGCGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLLFCGQASPPPCAVSTALHRL*HLERLS Trigger: GGACAGACGCTCCAGATGGCAGAGACGGTGAAGGGC...GGTGCTTACTGCGCATGGCGGGGGAGACGCTTGCCCACAGAAGAGGAGTGGGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR GCA 90 bp | CGGCCTGCACTGGAGGCGCAGCGGAAGCCCAGGTTGTCTGAGGCTGAGTCTGGAGGGCTGCCTCCAAAATaGCTTTGGCACTGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RPALEAQRKPRLSEAESGGLPPK*LWHWLP Trigger: TGGCAGCCAGTGCCAAAGGCATTTTGGAGGCAGCCC...TCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTGCGCCTCCAGTGCAGGCCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR CCA 90 bp | CTCCCACTCCTCTTCTGTGGGCAAGCGTCTCCCCCGCCATGCGCAGTAAGCACCGAGGAAGGAGGAACCTaGGCTGCCTCCAAAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLLFCGQASPPPCAVSTEEGGT*AASKMP Trigger: AGGCATTTTGGAGGCAGCCCAGGTTCCTCCTTCCTC...GGTGCTTACTGCGCATGGCGGGGGAGACGCTTGCCCACAGAAGAGGAGTGGGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR GCA 90 bp | AGCCAGCTGCCTCTGGAACATGGTCACGGAGGTACAGTGCTGAGAGGGTGCTTCGCCCTTCACCGTCTCTaGCATCTGGAGCGTCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQLPLEHGHGGTVLRGCFALHRL*HLERLS Trigger: GGACAGACGCTCCAGATGGCAGAGACGGTGAAGGGC...GAAGCACCCTCTCAGCACTGTACCTCCGTGACCATGTTCCAGAGGCAGCTGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCTGGAACATGGTCACGGAGGTACAGTGCTGAGAGGGTGCTTCGGAGATGCCAGAGCCGGGACCTaGAGGCTGCCTCCAAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLEHGHGGTVLRGCFGDARAGT*RLPPKC Trigger: GCATTTTGGAGGCAGCCTGCAGGTCCCGGCTCTGGC...ATCTCCGAAGCACCCTCTCAGCACTGTACCTCCGTGACCATGTTCCAGAGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTTGCAGTCCGAGTGTTCTTTGTGTCTGTCAGAGGGGAGGGGCTCAAAAGCCAGAGCCGGGACCTaGAGGCTGGATTTCCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFLQSECSLCLSEGRGSKARAGT*RLDFQH Trigger: GTGCTGGAAATCCAGCCTGCAGGTCCCGGCTCTGGC...TTTTGAGCCCCTCCCCTCTGACAGACACAAAGAACACTCGGACTGCAAGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGTAGGAGGATCGAGAGTTCGAGACCAGCCTTGCCACATATTGAGTATCCCCACTCCTCTTCTGTaGGCAAGCGTCTCCCCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEVGGSRVRDQPCHILSIPTPLL*ASVSPA Trigger: GGCGGGGGAGACGCTTGCCCACAGAAGAGGAGTGGG...GATACTCAATATGTGGCAAGGCTGGTCTCGAACTCTCGATCCTCCTACCTCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTTGCAGTCCGAGTGTTCTTTGTGTCTGTCAGAGGGGAGGGGCTCAAAACAGCACTCGGAAGGTTaGGGAAGGAGGAACCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PFLQSECSLCLSEGRGSKQHSEG*GRRNLG Trigger: GCCCAGGTTCCTCCTTCCTCAACCTTCCGAGTGCTG...TTTTGAGCCCCTCCCCTCTGACAGACACAAAGAACACTCGGACTGCAAGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR CCA 90 bp | GTATGTGGACGCTGTCCACTCCCACACATTGCCCATGAGGTCATACAGTCCGTACCGGGACCTGCAGGCTaGATTTCCAGCACTCGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VCGRCPLPHIAHEVIQSVPGPAG*ISSTRK Trigger: CTTCCGAGTGCTGGAAATCCAGCCTGCAGGTCCCGG...TACGGACTGTATGACCTCATGGGCAATGTGTGGGAGTGGACAGCGTCCACATAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
||
| CDS-3UTR TCA 90 bp | AGGTTCTGGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCCTTCTGGTGACCCGAGCCCTGTaGTTAGCAGAGCCGTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: RFWQQGFGTPHKGSIFLLVTRAL*LAEPSA Trigger: CGCAGACGGCTCTGCTAATCACAGGGCTCGGGTCAC...CAGAAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS-3UTR CCA 90 bp | TTGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCTCCGTAGTTGTTCTGTaGGGGGAAAGCGTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSGWCDGSVGKSTRLLFSVVVL*GESVHW Trigger: CCAGTGAACGCTTTCCCCCCACAGAACAACTACGGA...GAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCCCGAGGTCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR CAA 72 bp | CAGAGGCCAGCGAGGCTAGGTTCTGGCAGCAAGGCTTaGGCACACCTCACAAAGGAAGCATTTTCCTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRPARLGSGSKA*AHLTKEAFSFC Trigger: GCAGAAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTCGCTGGCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| 3UTR CAA 72 bp | CTTTGGGGAACTTTCCCTGCCATAAGTTGGTGCGGTTaGGCTGGAACCGGTTCCCCCATGGATAAACCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LWGTFPAISWCG*AGTGSPMDKPD Trigger: GTCAGGTTTATCCATGGGGGAACCGGTTCCAGCCAAACCGCACCAACTTATGGCAGGGAAAGTTCCCCAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| 3UTR CAA 72 bp | GGAGGATCGAGAGTTCGAGACCAGCCTTGCCACATATaGAGTATCTCGTTTCAGAGGCCAGCGAGGCTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GGSRVRDQPCHI*SISFQRPARLG Trigger: ACCTAGCCTCGCTGGCCTCTGAAACGAGATACTCAATATGTGGCAAGGCTGGTCTCGAACTCTCGATCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGGAGTTCAAGGTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGGAGCAAGGAACCCATaGTGGGGAACCAGAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KQEFKVICGYTRSLRLAWGARNP*WGTRTQ Trigger: CTGAGTTCTGGTTCCCCAGCATGGGTTCCTTGCTCC...CCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | TCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATCAAGCCCCCTCGGGCTaGAAACTCCCACTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSSGTCLQDTQKALHDQAPSG*KLPLLF Trigger: GAAGAGGAGTGGGAGTTTGCAGCCCGAGGGGGCTTG...ATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS-3UTR CCA 90 bp | TTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCATTGGTGCGGTTTGGCTaGAACCGGTTCCCCCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLILHLRDSPAPSLGHPLVRFG*NRFPHG Trigger: TCCATGGGGGAACCGGTTCCAGCCAAACCGCACCAA...TGGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTCTGGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCCTTCTGGCAAGGAACCCATGCTaGGGAACCAGAACTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RFWQQGFGTPHKGSIFLLARNPC*GTRTQS Trigger: GCTCTGAGTTCTGGTTCCCCAGCATGGGTTCCTTGC...CAGAAGGAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS-3UTR CCA 90 bp | TTGTCCTTAATACTGCACTTAAGAGACAGCCCAGCTCCCAGCCTTGGTCATCCACAGCAGGTTGGTATGTaGACGCTGTCCACTCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLILHLRDSPAPSLGHPQQVGM*TLSTPT Trigger: TGTGGGAGTGGACAGCGTCCACATACCAACCTGCTG...TGGATGACCAAGGCTGGGAGCTGGGCTGTCTCTTAAGTGCAGTATTAAGGACAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR CCA 90 bp | GCCTTCTGGCTTCTCTACTGTGCACCTTTGTTGATGTCTATAGTTTTCTTGTTTTCGGTCGGCCTGCACTaGAGGCGCAGCGGAAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AFWLLYCAPLLMSIVFLFSVGLH*RRSGSP Trigger: TGGGCTTCCGCTGCGCCTCCAGTGCAGGCCGACCGA...AAACAAGAAAACTATAGACATCAACAAAGGTGCACAGTAGAGAAGCCAGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGAGTTCAAGGTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGCACTGGTGACAGTCCATaGAAACCATCTTCAGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AGVQGHLWLHKELEASLGTGDSP*KPSSAL Trigger: CAAAGCTGAAGATGGTTTTCATGGACTGTCACCAGT...GCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR CCA 90 bp | CTCATAAGATCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCCTCCAAAATGCCTTTaGCACTGGCTGCCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LIRSSSSSGTCLQDTQKAPPKCL*HWLPPV Trigger: CACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGG...GGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGATCTTATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| CDS-3UTR CCA 90 bp | GTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATTAGCCCTCCAAAATGCCTTTaGCACTGGCTGCCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLLQGHVCRIHRRPYMISPPKCL*HWLPPV Trigger: CACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGG...GCTAATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | GAGGCTAGGTTCTGGCAGCAAGGCTTTGGCACACCTCACAAAGGAAGCATTTTCGGCATCAGATTTTCTTaGTTTCTGAGCTCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EARFWQQGFGTPHKGSIFGIRFS*FLSSGE Trigger: CTCCCCTGAGCTCAGAAAGCAAGAAAATCTGATGCC...GAAAATGCTTCCTTTGTGAGGTGTGCCAAAGCCTTGCTGCCAGAACCTAGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCACAATGCACATCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTATGGGCATGTCCTAGCTaGAGCCTGGGGCAGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPQCTSSLHKSFALLGLLWACPS*SLGQDR Trigger: CCTGTCCTGCCCCAGGCTTCAGCTAGGACATGCCCA...TAAAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCTTCTGCAGAATTTCCCAGAAGTGAAAGCTGAACCAGCCAGGGAGAAACCTGCCATAAGTTGGTaGGGTTTGGCTGGAACCGGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLLQNFPEVKAEPAREKPAISW*GLAGTG Trigger: ACCGGTTCCAGCCAAACCGCACCAACTTATGGCAGG...TTTCTCCCTGGCTGGTTCAGCTTTCACTTCTGGGAAATTCTGCAGAAGGAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| 3UTR CAA 72 bp | GGTTCTGGCATTTGTCTTCCTAGAGGGGCACTGACTTaGGTTCTCCCACAATGCACATCTTCACTTCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSGICLPRGALT*VLPQCTSSLHK Trigger: TTTATGAAGTGAAGATGTGCATTGTGGGAGAACCAAAGTCAGTGCCCCTCTAGGAAGACAAATGCCAGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| CDS-3UTR CCA 90 bp | TCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTAAATAGTGGGCGTGGTTTCCCTGCCATAAGTTaGTGCGGTTTGGCTGGAACC | + |
|
Preference number: 4 (lower is better) Translates to: SSLHKSFALLGLLNSGRGFPAIS*CGLAGT Trigger: GGTTCCAGCCAAACCGCACCAACTTATGGCAGGGAA...ACCACGCCCACTATTTAAAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCACAATGCACATCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTAGGCATCAGATTTTCTTaGTTTCTGAGCTCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPQCTSSLHKSFALLGLLGIRFS*FLSSGE Trigger: CTCCCCTGAGCTCAGAAAGCAAGAAAATCTGATGCC...TAAAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGATGTGCATTGTGGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
||
| 3UTR CAA 72 bp | AATTATATTGTGCTTCCTGATATACATAAGAATTTATaGACCTCGGGCTGGTGTGATGGCTCAGTGGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: NYIVLPDIHKNL*TSGWCDGSVGK Trigger: CTTACCCACTGAGCCATCACACCAGCCCGAGGTCAATAAATTCTTATGTATATCAGGAAGCACAATATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS TCA 90 bp | CCACCTGGCAGATGCACCATGGCAGGATCCTGGGCATGTCCTAGCTaGAGCCTGGGGCAGGACAGGAGCCACAGCAGCAACACCGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPGRCTMAGSWACPS*SLGQDRSHSSNTGG Trigger: CCCTCCGGTGTTGCTGCTGTGGCTCCTGTCCTGCCCCAGGCTTCAGCTAGGACATGCCCAGGATCCTGCCATGGTGCATCTGCCAGGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
||
| CDS CCA 90 bp | GCAGATGCACCATGGCAGGATCCTGGGCATGTCCTAGCTGAAGCCTaGGGCAGGACAGGAGCCACAGCAGCAACACCGGAGGGAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ADAPWQDPGHVLAEA*GRTGATAATPEGAR Trigger: CCTTGCTCCCTCCGGTGTTGCTGCTGTGGCTCCTGTCCTGCCCCAGGCTTCAGCTAGGACATGCCCAGGATCCTGCCATGGTGCATCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
||
| CDS GCA 90 bp | CGTTCCAGCTCACGTGTACCACGGGAAGCTCCAGTTTCTCTCGGATaGCAGAGCCGGGACCTGCAGGCTGCCTCCAAAATGCCTTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSSSRVPREAPVSLG*QSRDLQAASKMPLA Trigger: TGCCAAAGGCATTTTGGAGGCAGCCTGCAGGTCCCGGCTCTGGCATCCGAGAGAAACTGGAGCTTCCCGTGGTACACGTGAGCTGGAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
||
| CDS GCA 90 bp | TACCACGGGAAGCTCCAGTTTCTCTCGGATGCCAGAGCCGGGACCTaGAGGCGGCATCAGATTTTCTTGCTTTCTGAGCTCAGGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: YHGKLQFLSDARAGT*RRHQIFLLSELRGD Trigger: GTCTCCCCTGAGCTCAGAAAGCAAGAAAATCTGATGCCGCCTGCAGGTCCCGGCTCTGGCATCCGAGAGAAACTGGAGCTTCCCGTGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000201874.4 |
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| CDS CCA 90 bp | GCCAGAGCCGGGACCTGCAGGCTGCCTCCAAAATGCCTTTGGCACTaGCTGCCACCAGTGAACAGCCGGCATCAGATTTTCTTGCTTTCT | + |
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Preference number: 5 (lower is better) Translates to: ARAGTCRLPPKCLWH*LPPVNSRHQIFLLS Trigger: AGAAAGCAAGAAAATCTGATGCCGGCTGTTCACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGCAGCCTGCAGGTCCCGGCTCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS-3UTR CAA 90 bp | GGCTGGTGTGATGGCTCAGTGGGTAAGAGTACCCGACTGCTCTTCCAAAGGTCCATAAGTTGGTGCGGTTaGGCTGGAACCGGTTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: GWCDGSVGKSTRLLFQRSISWCG*AGTGSP Trigger: GGGGGAACCGGTTCCAGCCAAACCGCACCAACTTAT...GGACCTTTGGAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCACACCAGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS-3UTR CAA 90 bp | GCAGGAGTTCAAGGTCATTTGTGGCTACACAAGGAGCTTGAGGCTAGCCTGGGCCAGCGGAAGCCCAGGTaGTCTGAGGCTGAGTCTGGA | + |
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Preference number: 5 (lower is better) Translates to: AGVQGHLWLHKELEASLGQRKPR*SEAESG Trigger: TCCAGACTCAGCCTCAGACAACCTGGGCTTCCGCTG...GCCCAGGCTAGCCTCAAGCTCCTTGTGTAGCCACAAATGACCTTGAACTCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS GCA 90 bp | GAGCTCAGGGGAGACAAAATCCTCAAAGACGAAGCTCCACCCGAATaGCTCGGCTTCAGTCTGGTACTTCTTCTCCCTGACAAACTCCCT | + |
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Preference number: 5 (lower is better) Translates to: ELRGDKILKDEAPPE*LGFSLVLLLPDKLP Trigger: AGGGAGTTTGTCAGGGAGAAGAAGTACCAGACTGAAGCCGAGGCATTCGGGTGGAGCTTCGTCTTTGAGGATTTTGTCTCCCCTGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS-3UTR CAA 90 bp | CTCATAAGATCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCGCCTCCAAAATGCCTTaGGCACTGGCTGCCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: LIRSSSSSGTCLQDTQKAASKMP*ALAATS Trigger: ACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGC...GGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGATCTTATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| CDS-3UTR CAA 90 bp | TCCAGTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATGCCTCCAAAATGCCTTaGGCACTGGCTGCCACCAGT | + |
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Preference number: 5 (lower is better) Translates to: SSSSSGTCLQDTQKALHDASKMP*ALAATS Trigger: ACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGC...ATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAACTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 |
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| CDS-3UTR CAA 90 bp | GTTCTTCTTCAGGGACATGTCTGCAGGATACACAGAAGGCCCTACATGATTAGCTTTCCCTGCCATAAGTaGGTGCGGTTTGGCTGGAAC | + |
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Preference number: 5 (lower is better) Translates to: VLLQGHVCRIHRRPYMISFPCHK*VRFGWN Trigger: GTTCCAGCCAAACCGCACCAACTTATGGCAGGGAAA...GCTAATCATGTAGGGCCTTCTGTGTATCCTGCAGACATGTCCCTGAAGAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS CCA 90 bp | AAATCCTCAAAGACGAAGCTCCACCCGAATGCCTCGGCTTCAGTCTaGTACTTCTTCTCCCTGACAAACTCCCTGAAGTCTTTATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KSSKTKLHPNASASV*YFFSLTNSLKSLLV Trigger: CACCAATAAAGACTTCAGGGAGTTTGTCAGGGAGAAGAAGTACCAGACTGAAGCCGAGGCATTCGGGTGGAGCTTCGTCTTTGAGGATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS-3UTR CAA 90 bp | TCTTCACTTCATAAATCATTTGCTTTACTGGGGCTTTTAAATAGTGGGCGTGGTTCAGCTTTGTCACCTTaGGGGAACTTTCCCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: SSLHKSFALLGLLNSGRGSALSP*GNFPCH Trigger: ATGGCAGGGAAAGTTCCCCAAAGGTGACAAAGCTGA...ACCACGCCCACTATTTAAAAGCCCCAGTAAAGCAAATGATTTATGAAGTGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS CCA 72 bp | CCATGGCAGGATCCTGGGCATGTCCTAGCTGAAGCCTaGGGCAGGACAGGAGCCACAGCAGCAACACCGGAG | + |
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Preference number: 6 (lower is better) Translates to: PWQDPGHVLAEA*GRTGATAATPE Trigger: CTCCGGTGTTGCTGCTGTGGCTCCTGTCCTGCCCCAGGCTTCAGCTAGGACATGCCCAGGATCCTGCCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS CCA 72 bp | AGAGCCGGGACCTGCAGGCTGCCTCCAAAATGCCTTTaGCACTGGCTGCCACCAGTGAACAGCCGGCATCAG | + |
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Preference number: 6 (lower is better) Translates to: RAGTCRLPPKCL*HWLPPVNSRHQ Trigger: CTGATGCCGGCTGTTCACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGCAGCCTGCAGGTCCCGGCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS CAA 72 bp | CAGAGCCGGGACCTGCAGGCTGCCTCCAAAATGCCTTaGGCACTGGCTGCCACCAGTGAACAGCCGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: QSRDLQAASKMP*ALAATSEQPAS Trigger: TGATGCCGGCTGTTCACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGCAGCCTGCAGGTCCCGGCTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171300.8 |
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| CDS GCA 72 bp | TTACTGTCACTTCCCGGGCAGGCCCTTCACCGTCTCTaGCATCTGGAGCGTCTGTCCCCATCAGAAACCGGC | + |
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Preference number: 6 (lower is better) Translates to: LLSLPGQALHRL*HLERLSPSETG Trigger: GCCGGTTTCTGATGGGGACAGACGCTCCAGATGGCAGAGACGGTGAAGGGCCTGCCCGGGAAGTGACAGTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS CCA 72 bp | TCCCCATCAGAAACCGGCCACCTGGCAGATGCACCATaGCAGGATCCTGGGCATGTCCTAGCTGAAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPSETGHLADAP*QDPGHVLAEAW Trigger: CCAGGCTTCAGCTAGGACATGCCCAGGATCCTGCCATGGTGCATCTGCCAGGTGGCCGGTTTCTGATGGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS CCA 72 bp | ATCTGGAGCGTCTGTCCCCATCAGAAACCGGCCACCTaGCAGATGCACCATGGCAGGATCCTGGGCATGTCC | + |
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Preference number: 6 (lower is better) Translates to: IWSVCPHQKPAT*QMHHGRILGMS Trigger: GGACATGCCCAGGATCCTGCCATGGTGCATCTGCCAGGTGGCCGGTTTCTGATGGGGACAGACGCTCCAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS GCA 72 bp | TCACGTGTACCACGGGAAGCTCCAGTTTCTCTCGGATaGCAGAGCCGGGACCTGCAGGCTGGATTTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SRVPREAPVSLG*QSRDLQAGFPA Trigger: TGCTGGAAATCCAGCCTGCAGGTCCCGGCTCTGGCATCCGAGAGAAACTGGAGCTTCCCGTGGTACACGTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| CDS GCA 72 bp | TCACGTGTACCACGGGAAGCTCCAGTTTCTCTCGGATaGCAGAGCCGGGACCTGCAGGCGGCATCAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: SRVPREAPVSLG*QSRDLQAASDF Trigger: AAAATCTGATGCCGCCTGCAGGTCCCGGCTCTGGCATCCGAGAGAAACTGGAGCTTCCCGTGGTACACGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000201874.4 |
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| CDS CCA 72 bp | AGTTTCTCTCGGATGCCAGAGCCGGGACCTGCAGGCTaGATTTCCAGCACTCGGAAGGTTGAGGAAGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: SFSRMPEPGPAG*ISSTRKVEEGG Trigger: TCCTCCTTCCTCAACCTTCCGAGTGCTGGAAATCCAGCCTGCAGGTCCCGGCTCTGGCATCCGAGAGAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| CDS CCA 72 bp | GAGGAACCTGGGCTGCCTCCAAAATGCCTTTGGCACTaGCTGCCACCAGTGAACAGCCGGCATCAGATTTTC | + |
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Preference number: 6 (lower is better) Translates to: EEPGLPPKCLWH*LPPVNSRHQIF Trigger: GAAAATCTGATGCCGGCTGTTCACTGGTGGCAGCCAGTGCCAAAGGCATTTTGGAGGCAGCCCAGGTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000137357.5 |
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| CDS GCA 72 bp | GGAGACAAAATCCTCAAAGACGAAGCTCCACCCGAATaGCTCGGCTTCAGTCTGGTACTTCTTCTCCCTGAC | + |
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Preference number: 6 (lower is better) Translates to: GDKILKDEAPPE*LGFSLVLLLPD Trigger: GTCAGGGAGAAGAAGTACCAGACTGAAGCCGAGGCATTCGGGTGGAGCTTCGTCTTTGAGGATTTTGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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| CDS CCA 72 bp | AAGACGAAGCTCCACCCGAATGCCTCGGCTTCAGTCTaGTACTTCTTCTCCCTGACAAACTCCCTGAAGTCT | + |
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Preference number: 6 (lower is better) Translates to: KTKLHPNASASV*YFFSLTNSLKS Trigger: AGACTTCAGGGAGTTTGTCAGGGAGAAGAAGTACCAGACTGAAGCCGAGGCATTCGGGTGGAGCTTCGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000137357.5 ENSMUST00000171300.8 ENSMUST00000201874.4 |
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