Pregenerated sensors for SUMF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030101Ensembl transcript IDs: ENSMUST00000032191.16, ENSMUST00000167338.8, ENSMUST00000169446.2, ENSMUST00000172188.2
Found 116 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGTCAAGGCAGACAAGGTGCTGGACTCCAGGGTCTGACCCTGTaGCAGAGTCTGGCCAGGACTTCCTGGTTCTCGGCTCTCTCCTCT | + |
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Preference number: 1 (lower is better) Translates to: RGQGRQGAGLQGLTL*QSLARTSWFSALSS Trigger: AGAGGAGAGAGCCGAGAACCAGGAAGTCCTGGCCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGACCTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 90 bp | ACACTCGCCAGCCATTTGGTCACGCGAGACAGTTCCTTTGGCCACTaGGTGGACATGGAATCCTCCGTAGATGGGAATACTTTACATGAG | + |
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Preference number: 1 (lower is better) Translates to: TLASHLVTRDSSFGH*VDMESSVDGNTLHE Trigger: CTCATGTAAAGTATTCCCATCTACGGAGGATTCCATGTCCACCCAGTGGCCAAAGGAACTGTCTCGCGTGACCAAATGGCTGGCGAGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 90 bp | GCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCTTATaGTCCATCTTCTTCATGGCAGCTCCTCCTATCCTCTTCTTCCTG | + |
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Preference number: 1 (lower is better) Translates to: AVFPDTWEFPLDKGL*SIFFMAAPPILFFL Trigger: CAGGAAGAAGAGGATAGGAGGAGCTGCCATGAAGAAGATGGACCATAAGCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR TCA 90 bp | TCTTCATGGCAGCTCCTCCTATCCTCTTCTTCCTGCTTCTCTCCTTaGTCTCTCCTCTCTCTCTCCATACCCAACCACACTCAAAACCCA | + |
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Preference number: 1 (lower is better) Translates to: SSWQLLLSSSSCFSP*SLLSLSIPNHTQNP Trigger: TGGGTTTTGAGTGTGGTTGGGTATGGAGAGAGAGAGGAGAGATCAAGGAGAGAAGCAGGAAGAAGAGGATAGGAGGAGCTGCCATGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 90 bp | AAAGCATCTGATATCGCAAAATCAACCAGATTTCTCGTATCTCTCTaGTGTAATATATCACACACCCTGAATGGAGTCTATTCAAGGTCC | + |
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Preference number: 1 (lower is better) Translates to: KASDIAKSTRFLVSL*CNISHTLNGVYSRS Trigger: GGACCTTGAATAGACTCCATTCAGGGTGTGTGATATATTACACCAGAGAGATACGAGAAATCTGGTTGATTTTGCGATATCAGATGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR GCA 90 bp | TGGCCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACTCAAGGCAGACAAGGTaGTGGACTCCAGGGTCTGAC | + |
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Preference number: 2 (lower is better) Translates to: WPGCLTAVFPDTWEFPLDSRQTR*WTPGSD Trigger: GTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGA...GTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CAA 90 bp | GATACACCACACAATAAAGCACACGTGCTGACACTCGCCAGCCATTaGGTCACGCGAGACAGTTCCTTTGGCCACTGGGTGGACATGGAA | + |
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Preference number: 2 (lower is better) Translates to: DTPHNKAHVLTLASH*VTRDSSFGHWVDME Trigger: TTCCATGTCCACCCAGTGGCCAAAGGAACTGTCTCGCGTGACCAAATGGCTGGCGAGTGTCAGCACGTGTGCTTTATTGTGTGGTGTATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR TCA 90 bp | GTAGAGTCACTCCACAGGCATTCCTGTGTGTTCAGAACTCCAAACTTAAGTGTCCTGGACTCCAGGGTCTaGCCCTGTGGCAGAGTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VESLHRHSCVFRTPNLSVLDSRV*PCGRVW Trigger: CCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAG...GACACTTAAGTTTGGAGTTCTGAACACACAGGAATGCCTGTGGAGTGACTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CCA 90 bp | GGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCGGTCCATCTTCTTCATaGCAGCTCCTCCTATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: GCLTAVFPDTWEFPLDKGGPSSS*QLLLSS Trigger: AGAGGATAGGAGGAGCTGCCATGAAGAAGATGGACC...GCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CAA 90 bp | TTCTTCATGGCAGCTCCTCCTATCCTCTTCTTCCTGCTTCTCTCCTaGATCTCTCCTCTCTCTCTCCATACCCAACCACACTCAAAACCC | + |
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Preference number: 2 (lower is better) Translates to: FFMAAPPILFFLLLS*ISPLSLHTQPHSKP Trigger: GGGTTTTGAGTGTGGTTGGGTATGGAGAGAGAGAGGAGAGATCAAGGAGAGAAGCAGGAAGAAGAGGATAGGAGGAGCTGCCATGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CCA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTACTGGCCAGGACTTCCTaGTTCTCGGCTCTCTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LVLFLPCGTNISLSPTGLLARTS*FSALSS Trigger: AGAGGAGAGAGCCGAGAACCAGGAAGTCCTGGCCAG...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CCA 90 bp | CACCCTGAATGGAGTCTATTCAAGGTCCTGGTTCTTTTTCTCCCATGTGGTACCCATTCTTTGAAGGCTTaGGGGCAAAGGGGAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: HPEWSLFKVLVLFLPCGTHSLKA*GQRGNK Trigger: CTTGTTTCCCCTTTGCCCCCAAGCCTTCAAAGAATG...GGTACCACATGGGAGAAAAAGAACCAGGACCTTGAATAGACTCCATTCAGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAATGGGAATACTTTACATaGGATCAGTTCAGATTTCCA | + |
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Preference number: 2 (lower is better) Translates to: PGCLTAVFPDTWEFPLDKWEYFT*DQFRFP Trigger: TGGAAATCTGAACTGATCTCATGTAAAGTATTCCCA...TTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR GCA 90 bp | CCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAACATAAATTCTCACTATaGAATCACAATACACTCTGC | + |
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Preference number: 2 (lower is better) Translates to: PGCLTAVFPDTWEFPLDKHKFSL*NHNTLC Trigger: GCAGAGTGTATTGTGATTGCATAGTGAGAATTTATG...TTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR TCA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTAATATTTCACATTCTTTaGAGGCTTGGGGGCAAAGGG | + |
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Preference number: 2 (lower is better) Translates to: LVLFLPCGTNISLSPTGLIFHIL*RLGGKG Trigger: CCCTTTGCCCCCAAGCCTTCAAAGAATGTGAAATAT...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR TCA 90 bp | TCTCCATACCCAACCACACTCAAAACCCACCTACCTCTAATCCCTCCAGTAATTACAATTCATACCATCTaGCAAAACCTCAACACCCAA | + |
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Preference number: 2 (lower is better) Translates to: SPYPTTLKTHLPLIPPVITIHTI*QNLNTQ Trigger: TTGGGTGTTGAGGTTTTGTCAGATGGTATGAATTGT...AATTACTGGAGGGATTAGAGGTAGGTGGGTTTTGAGTGTGGTTGGGTATGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR TCA 72 bp | GAGGTCAAGGCAGACAAGGTGCTGGACTCCAGGGTCTaGCCCTGTGGCAGAGTCTGGCCAGGACTTCCTGGT | + |
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Preference number: 3 (lower is better) Translates to: EVKADKVLDSRV*PCGRVWPGLPG Trigger: ACCAGGAAGTCCTGGCCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 72 bp | AGCCATTTGGTCACGCGAGACAGTTCCTTTGGCCACTaGGTGGACATGGAATCCTCCGTAGATGGGAATACT | + |
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Preference number: 3 (lower is better) Translates to: SHLVTRDSSFGH*VDMESSVDGNT Trigger: AGTATTCCCATCTACGGAGGATTCCATGTCCACCCAGTGGCCAAAGGAACTGTCTCGCGTGACCAAATGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CAA 90 bp | GGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCCATATTTCACATTCTTaGAAGGCTTGGGGGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: GCLTAVFPDTWEFPLDKGHISHS*KAWGQR Trigger: CCTTTGCCCCCAAGCCTTCAAAGAATGTGAAATATG...GCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR TCA 72 bp | GGACATGGAATCCTCCGTAGATGGGAATACTTTACATaGGATCAGTTCAGATTTCCAGGGGAGGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GHGILRRWEYFT*DQFRFPGEASC Trigger: GCAGCTGGCCTCCCCTGGAAATCTGAACTGATCTCATGTAAAGTATTCCCATCTACGGAGGATTCCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 72 bp | CCAGATACTTGGGAGTTTCCTCTGGACAAAGGCTTATaGTCCATCTTCTTCATGGCAGCTCCTCCTATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PDTWEFPLDKGL*SIFFMAAPPIL Trigger: GAGGATAGGAGGAGCTGCCATGAAGAAGATGGACCATAAGCCTTTGTCCAGAGGAAACTCCCAAGTATCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 72 bp | TCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTaGACAAAGGCTTATGGTCCATCTTCTTCATGGCAG | + |
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Preference number: 3 (lower is better) Translates to: SQRCSQILGSFL*TKAYGPSSSWQ Trigger: CTGCCATGAAGAAGATGGACCATAAGCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CAA 90 bp | TCTTGTAAATGTGAGAATTCACTCACAGGCCTAGACCTTCAGGTACCAGATTTACGCGAGACAGTTCCTTaGGCCACTGGGTGGACATGG | + |
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Preference number: 3 (lower is better) Translates to: SCKCENSLTGLDLQVPDLRETVP*ATGWTW Trigger: CCATGTCCACCCAGTGGCCAAAGGAACTGTCTCGCG...TAAATCTGGTACCTGAAGGTCTAGGCCTGTGAGTGAATTCTCACATTTACAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR GCA 72 bp | GGTTGGACTCTGAAATCACAGCTCACGGAGCAAAAATaGACGTTTACACCTGACACACTTGGGTGCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: GWTLKSQLTEQK*TFTPDTLGCFH Trigger: ATGGAAGCACCCAAGTGTGTCAGGTGTAAACGTGCATTTTTGCTCCGTGAGCTGTGATTTCAGAGTCCAACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| 3UTR CCA 72 bp | TTCCTCTGGACAAAGGCTTATGGTCCATCTTCTTCATaGCAGCTCCTCCTATCCTCTTCTTCCTGCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: FLWTKAYGPSSS*QLLLSSSSCFS Trigger: AGAGAAGCAGGAAGAAGAGGATAGGAGGAGCTGCCATGAAGAAGATGGACCATAAGCCTTTGTCCAGAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CAA 90 bp | CCAAGAATTGCCAGGTTGGACTCTGAAATCACAGCTCACGGAGCAAAAATGCACTTACACCTGACACACTaGGGTGCTTCCATTTTGGTA | + |
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Preference number: 3 (lower is better) Translates to: PRIARLDSEITAHGAKMHLHLTH*GASILV Trigger: TACCAAAATGGAAGCACCCAAGTGTGTCAGGTGTAA...GTGCATTTTTGCTCCGTGAGCTGTGATTTCAGAGTCCAACCTGGCAATTCTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| 3UTR CCA 72 bp | GAGTCTATTCAAGGTCCTGGTTCTTTTTCTCCCATGTaGTACCAATATAAGCTTATCCCCAACTGGCTTACA | + |
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Preference number: 3 (lower is better) Translates to: ESIQGPGSFSPM*YQYKLIPNWLT Trigger: TGTAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAGGACCTTGAATAGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR-3UTR CAA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTACTAGTTCAAATAGAGTaGGAGAGAGCCTCAAAGATC | + |
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Preference number: 3 (lower is better) Translates to: LVLFLPCGTNISLSPTGLLVQIE*ERASKI Trigger: GATCTTTGAGGCTCTCTCCAACTCTATTTGAACTAG...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR TCA 72 bp | TTCTCGTATCTCTCTGGTGTAATATATCACACACCCTaGATGGAGTCTATTCAAGGTCCTGGTTCTTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: FSYLSGVIYHTP*MESIQGPGSFS Trigger: AGAAAAAGAACCAGGACCTTGAATAGACTCCATTCAGGGTGTGTGATATATTACACCAGAGAGATACGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CCA 72 bp | GATATCGCAAAATCAACCAGATTTCTCGTATCTCTCTaGTGTAATATATCACACACCCTGAATGGAGTCTAT | + |
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Preference number: 3 (lower is better) Translates to: DIAKSTRFLVSL*CNISHTLNGVY Trigger: ATAGACTCCATTCAGGGTGTGTGATATATTACACCAGAGAGATACGAGAAATCTGGTTGATTTTGCGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR CCA 90 bp | TCAAGGCAGACAAGGTGCTGGACTCCAGGGTCTGACCCTGTGGCAGAGTCTGGCTCTGCGGTGGGCAGGTaGTCGGCTGCACATCGGAAT | + |
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Preference number: 4 (lower is better) Translates to: SRQTRCWTPGSDPVAESGSAVGR*SAAHRN Trigger: ATTCCGATGTGCAGCCGACCACCTGCCCACCGCAGA...GCCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | TCAAGGCAGACAAGGTGCTGGACTCCAGGGTCTGACCCTGTGGCAGAGTCTGGCCATCCTCGCCAGTGTTaGTCACAGGAAACTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: SRQTRCWTPGSDPVAESGHPRQC*SQETCP Trigger: AGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATG...GCCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR TCA 90 bp | TCTCCATACCCAACCACACTCAAAACCCACCTACCTCTAATCCCTCCAGTAATTTGGGGACCATCTTGGTaGGCGCGAGCGGTCGCGGGC | + |
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Preference number: 4 (lower is better) Translates to: SPYPTTLKTHLPLIPPVIWGPSW*ARAVAG Trigger: GCCCGCGACCGCTCGCGCTCACCAAGATGGTCCCCA...AATTACTGGAGGGATTAGAGGTAGGTGGGTTTTGAGTGTGGTTGGGTATGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | CTGGCCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACCACCATGGAGCAGCTaGAACTGCCTGGTGGATATG | + |
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Preference number: 4 (lower is better) Translates to: LAWLPHSGVPRYLGVSSGPPWSS*NCLVDM Trigger: CATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGG...TCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGGCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CAA 72 bp | CACAATAAAGCACACGTGCTGACACTCGCCAGCCATTaGGTCACGCGAGACAGTTCCTTTGGCCACTGGGTG | + |
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Preference number: 4 (lower is better) Translates to: HNKAHVLTLASH*VTRDSSFGHWV Trigger: CACCCAGTGGCCAAAGGAACTGTCTCGCGTGACCAAATGGCTGGCGAGTGTCAGCACGTGTGCTTTATTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR TCA 90 bp | GGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCCTTCTCCATCCTGCCTaGTCTGAGGATCATCAGTGC | + |
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Preference number: 4 (lower is better) Translates to: GCLTAVFPDTWEFPLDKGLLHPA*SEDHQC Trigger: GCACTGATGATCCTCAGATCAGGCAGGATGGAGAAG...GCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGAGCTGCAACTGCCTGGTaGATATGCGTTTTCACTTGC | + |
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Preference number: 4 (lower is better) Translates to: LAWLPHSGVPRYLGVSSGAATAW*ICVFTC Trigger: GCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGC...TCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR CCA 90 bp | CTGGCCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGAATCGGAATCCCAGGTTaGATGCAGAGCTATCTGGTG | + |
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Preference number: 4 (lower is better) Translates to: LAWLPHSGVPRYLGVSSGIGIPG*MQSYLV Trigger: CACCAGATAGCTCTGCATCCAACCTGGGATTCCGAT...TCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| 3UTR CAA 72 bp | CTGGCCTGGTTGCCTCACAGCGGTGTTCCCAGATACTaGGGAGTTTCCTCTGGACAAAGGCTTATGGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LAWLPHSGVPRY*GVSSGQRLMVH Trigger: ATGGACCATAAGCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR TCA 90 bp | GGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCCATCAGTGCCCATTGTaGATACTCCAGCAGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: GCLTAVFPDTWEFPLDKGHQCPL*ILQQEW Trigger: CCATTCCTGCTGGAGTATTCACAATGGGCACTGATG...GCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | CCAGGACTTCCTGGTTCTCGGCTCTCTCCTCTTCAAAAGGCTTTCAAAGTAAAAGGGCAGGTGGTCGGCTaGACATCGGAATCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: PGLPGSRLSPLQKAFKVKGQVVG*TSESQV Trigger: AACCTGGGATTCCGATGTGCAGCCGACCACCTGCCC...TTTTACTTTGAAAGCCTTTTGAAGAGGAGAGAGCCGAGAACCAGGAAGTCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR CCA 90 bp | CTTTACATGAGATCAGTTCAGATTTCCAGGGGAGGCCAGCTGCGAGTAAGAAACGACAGGCAACCACCATaGAGCAGCTGCAACTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LYMRSVQISRGGQLRVRNDRQPP*SSCNCL Trigger: CAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTC...GTTTCTTACTCGCAGCTGGCCTCCCCTGGAAATCTGAACTGATCTCATGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR CCA 90 bp | CACAGCTCACGGAGCAAAAATGCACGTTTACACCTGACACACTTGGGTGCTTCCCCTCTTACGGTCCCCTaGGCCACTTTTCCTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: HSSRSKNARLHLTHLGASPLTVP*ATFPHL Trigger: CAAATGAGGAAAAGTGGCCCAGGGGACCGTAAGAGG...GGAAGCACCCAAGTGTGTCAGGTGTAAACGTGCATTTTTGCTCCGTGAGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| CDS-3UTR TCA 90 bp | AGTTCAGATTTCCAGGGGAGGCCAGCTGCGAGTAAGAAACGCCTTCTTGAATCTAACAGTCCACCAGTCTaGGGTCCACTCCCACACATT | + |
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Preference number: 4 (lower is better) Translates to: SSDFQGRPAASKKRLLESNSPPV*GPLPHI Trigger: AATGTGTGGGAGTGGACCTCAGACTGGTGGACTGTT...AGATTCAAGAAGGCGTTTCTTACTCGCAGCTGGCCTCCCCTGGAAATCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | TCTCCATACCCAACCACACTCAAAACCCACCTACCTCTAATCCCTCCAGTAATTTGCTGTCCTTTGGGCTaGAGTTTGTTGCCCCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SPYPTTLKTHLPLIPPVICCPLG*SLLPQG Trigger: CCCCTGGGGCAACAAACTGCAGCCCAAAGGACAGCA...AATTACTGGAGGGATTAGAGGTAGGTGGGTTTTGAGTGTGGTTGGGTATGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | GGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAAGGCATATGCGTTTTCACTTaGTCGCTCAACATGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GCLTAVFPDTWEFPLDKGICVFT*SLNMPS Trigger: TGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATAT...GCCTTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | TCTCCATACCCAACCACACTCAAAACCCACCTACCTCTAATCCCTCCAGTAATTGGGAAAAGCCTGTTCTaGAGGCCTCCTCTACAGCTG | + |
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Preference number: 4 (lower is better) Translates to: SPYPTTLKTHLPLIPPVIGKSLF*RPPLQL Trigger: CAGCTGTAGAGGAGGCCTGCAGAACAGGCTTTTCCC...AATTACTGGAGGGATTAGAGGTAGGTGGGTTTTGAGTGTGGTTGGGTATGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS-3UTR GCA 90 bp | CCAGGACTTCCTGGTTCTCGGCTCTCTCCTCTTCAAAAGGCTTTCAAAGTAAAATGGGCTGCAGTTTGTTaGCCCAGGGGAAAAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLPGSRLSPLQKAFKVKWAAVC*PRGKAC Trigger: ACAGGCTTTTCCCCTGGGGCAACAAACTGCAGCCCA...TTTTACTTTGAAAGCCTTTTGAAGAGGAGAGAGCCGAGAACCAGGAAGTCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CCA 90 bp | CTTTACATGAGATCAGTTCAGATTTCCAGGGGAGGCCAGCTGCGAGTAAGAAACGGATGCAGAGCTATCTaGTGTGTTCTGGCTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LYMRSVQISRGGQLRVRNGCRAI*CVLASS Trigger: GCTCGAAGCCAGAACACACCAGATAGCTCTGCATCC...GTTTCTTACTCGCAGCTGGCCTCCCCTGGAAATCTGAACTGATCTCATGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR TCA 90 bp | GTAGAGTCACTCCACAGGCATTCCTGTGTGTTCAGAACTCCAAACTTAAGTGTCAAAAGCCATCAACAGTaGCTCTCCTGGCAGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VESLHRHSCVFRTPNLSVKSHQQ*LSWQGL Trigger: AAGCCCCTGCCAGGAGAGTCACTGTTGATGGCTTTT...GACACTTAAGTTTGGAGTTCTGAACACACAGGAATGCCTGTGGAGTGACTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR TCA 90 bp | TTGCCAGGTTGGACTCTGAAATCACAGCTCACGGAGCAAAAATGCACGTTTACAAACAGTCCACCAGTCTaGGGTCCACTCCCACACATT | + |
|
Preference number: 4 (lower is better) Translates to: LPGWTLKSQLTEQKCTFTNSPPV*GPLPHI Trigger: AATGTGTGGGAGTGGACCTCAGACTGGTGGACTGTT...TGTAAACGTGCATTTTTGCTCCGTGAGCTGTGATTTCAGAGTCCAACCTGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
||
| CDS-3UTR TCA 90 bp | CACCCTGAATGGAGTCTATTCAAGGTCCTGGTTCTTTTTCTCCCATGTGGTACCTCCTCAACAGAATGGTaGACAGTCCACCAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HPEWSLFKVLVLFLPCGTSSTEW*TVHQSE Trigger: CTCAGACTGGTGGACTGTTCACCATTCTGTTGAGGA...GGTACCACATGGGAGAAAAAGAACCAGGACCTTGAATAGACTCCATTCAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR GCA 90 bp | CACCCTGAATGGAGTCTATTCAAGGTCCTGGTTCTTTTTCTCCCATGTGGTACCGCTGTATTCCCACTCTaGCTCAGTAGGCAACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPEWSLFKVLVLFLPCGTAVFPL*LSRQPL Trigger: AAGAGGTTGCCTACTGAGGCAGAGTGGGAATACAGC...GGTACCACATGGGAGAAAAAGAACCAGGACCTTGAATAGACTCCATTCAGGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGGTTGGACTCTGAAATCACAGCTCACGGAGCAAAAATGCACGTTTACACATGGAAGAGGCAGATaGCCCAACCTGTTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LPGWTLKSQLTEQKCTFTHGRGR*PNLFHR Trigger: CCTGTGAAACAGGTTGGGCCATCTGCCTCTTCCATG...TGTAAACGTGCATTTTTGCTCCGTGAGCTGTGATTTCAGAGTCCAACCTGGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
||
| CDS-3UTR TCA 90 bp | TCACGGAGCAAAAATGCACGTTTACACCTGACACACTTGGGTGCTTCCATTTTGTCCTCAACAGAATGGTaGACAGTCCACCAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRSKNARLHLTHLGASILSSTEW*TVHQSE Trigger: CTCAGACTGGTGGACTGTTCACCATTCTGTTGAGGA...CAAAATGGAAGCACCCAAGTGTGTCAGGTGTAAACGTGCATTTTTGCTCCGTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGACTTCCTGGTTCTCGGCTCTCTCCTCTTCAAAAGGCTTTCAAAGTAAAAACTGCCTGGTGGATATaGGTTTTCACTTGCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLPGSRLSPLQKAFKVKTAWWI*VFTCSL Trigger: GAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGT...TTTTACTTTGAAAGCCTTTTGAAGAGGAGAGAGCCGAGAACCAGGAAGTCCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CCA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTAACCTGTGCAGAATACTaGAGTCCGGACCCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LVLFLPCGTNISLSPTGLTCAEY*SPDPLG Trigger: ACCCAGAGGGTCCGGACTCCAGTATTCTGCACAGGT...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CCA 90 bp | CCAGGACTTCCTGGTTCTCGGCTCTCTCCTCTTCAAAAGGCTTTCAAAGTAAAATGCCCTGCCAGATGTTaGCATAATGCTGTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLPGSRLSPLQKAFKVKCPARC*HNAVLW Trigger: CCAAAGGACAGCATTATGCCAACATCTGGCAGGGCA...TTTTACTTTGAAAGCCTTTTGAAGAGGAGAGAGCCGAGAACCAGGAAGTCCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR TCA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTACCATCCTGCCTGATCTaGGGATCATCAGTGCCCATT | + |
|
Preference number: 4 (lower is better) Translates to: LVLFLPCGTNISLSPTGLPSCLI*GSSVPI Trigger: AATGGGCACTGATGATCCTCAGATCAGGCAGGATGG...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CCA 90 bp | CCAGGACTTCCTGGTTCTCGGCTCTCTCCTCTTCAAAAGGCTTTCAAAGTAAAAATAAGCCATAGCCATTaGGAGGAAAGGCATCAACGG | + |
|
Preference number: 4 (lower is better) Translates to: PGLPGSRLSPLQKAFKVKISHSH*EERHQR Trigger: CCGTTGATGCCTTTCCTCCCAATGGCTATGGCTTAT...TTTTACTTTGAAAGCCTTTTGAAGAGGAGAGAGCCGAGAACCAGGAAGTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR GCA 90 bp | CTGGTTCTTTTTCTCCCATGTGGTACCAATATAAGCTTATCCCCAACTGGCTTATGGAGCAGCTGCAACTaGCTGGTGGATATGCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLFLPCGTNISLSPTGLWSSCN*LVDMRF Trigger: AAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCA...TAAGCCAGTTGGGGATAAGCTTATATTGGTACCACATGGGAGAAAAAGAACCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| 3UTR CAA 72 bp | TCCCTAATTAGTACATATTTCACATTCTTTGAAGGCTaGGGGGCAAAGGGGAAACAAGGCTTCAAACTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLISTYFTFFEG*GAKGKQGFKLS Trigger: GGACAGTTTGAAGCCTTGTTTCCCCTTTGCCCCCAAGCCTTCAAAGAATGTGAAATATGTACTAATTAGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS CCA 90 bp | GCGTTCCGCAGCCGCACGAGCCCGCAAGGGACGCCGCACCTTCCCTaGCCTCGGCCTCATCGCTTCCCGCCACCTCGCACGCCAACACCA | + |
|
Preference number: 5 (lower is better) Translates to: AFRSRTSPQGTPHLP*PRPHRFPPPRTPTP Trigger: TGGTGTTGGCGTGCGAGGTGGCGGGAAGCGATGAGGCCGAGGCCAGGGAAGGTGCGGCGTCCCTTGCGGGCTCGTGCGGCTGCGGAACGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS GCA 90 bp | TGCGGTGGGCAGGTGGTCGGCTGCACATCGGAATCCCAGGTTGGATaGAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTGCACAGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: CGGQVVGCTSESQVG*RAIWCVLASSCTAV Trigger: TACCGCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCACCTGCCCACCGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CCA 90 bp | AGTCTGCGGTGGGCAGGTGGTCGGCTGCACATCGGAATCCCAGGTTaGATGCAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRWAGGRLHIGIPG*MQSYLVCSGFELHS Trigger: GCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCACCTGCCCACCGCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS GCA 90 bp | AGGCATCAACGGGGGCAGTTCCTTGGAAGCCATCCTCGCCAGTGTTaGTCACAGGAAACTTGCCCTGCCAGATGTTGGCATAATGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RHQRGQFLGSHPRQC*SQETCPARCWHNAV Trigger: GACAGCATTATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATGGCTTCCAAGGAACTGCCCCCGTTGATGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
||
| CDS CCA 90 bp | CATCCTCGCCAGTGTTGCTCACAGGAAACTTGCCCTGCCAGATGTTaGCATAATGCTGTCCTTTGGGCTGCAGTTTGTTGCCCCAGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: HPRQCCSQETCPARC*HNAVLWAAVCCPRG Trigger: TCCCCTGGGGCAACAAACTGCAGCCCAAAGGACAGCATTATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
||
| CDS-3UTR CAA 90 bp | TCAAGGCAGACAAGGTGCTGGACTCCAGGGTCTGACCCTGTGGCAGAGTCTGGCGATATGCGTTTTCACTaGCTCGCTCAACATGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRQTRCWTPGSDPVAESGDMRFH*LAQHAF Trigger: GAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATC...GCCAGACTCTGCCACAGGGTCAGACCCTGGAGTCCAGCACCTTGTCTGCCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS TCA 90 bp | TCAACAGTGACTCTCCTGGCAGGGGCTTCTCCATCCTGCCTGATCTaGGGATCATCAGTGCCCATTGTGAATACTCCAGCAGGAATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: STVTLLAGASPSCLI*GSSVPIVNTPAGMG Trigger: CCCCATTCCTGCTGGAGTATTCACAATGGGCACTGATGATCCTCAGATCAGGCAGGATGGAGAAGCCCCTGCCAGGAGAGTCACTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CCA 90 bp | ACCCTCTGGGTGTCTCCAATTAGCTCCCTTGACAGGCAACCACCATaGAGCAGCTGCAACTGCCTGGTGGATATGCGTTTTCACTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLWVSPISSLDRQPP*SSCNCLVDMRFHLL Trigger: GAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACACCCAGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS CCA 90 bp | GTGGTCGGCTGCACATCGGAATCCCAGGTTGGATGCAGAGCTATCTaGTGTGTTCTGGCTTCGAGCTGCACAGCGGTACCTATAGCAATA | + |
|
Preference number: 5 (lower is better) Translates to: VVGCTSESQVGCRAI*CVLASSCTAVPIAI Trigger: TATTGCTATAGGTACCGCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS TCA 90 bp | CCAGAAGTGGGACCCTTTGGGTTGAACGTTTCCTCAACAGAATGGTaGACAGTCCACCAGTCTGAGGTCCACTCCCACACATTCCCCACT | + |
|
Preference number: 5 (lower is better) Translates to: PEVGPFGLNVSSTEW*TVHQSEVHSHTFPT Trigger: AGTGGGGAATGTGTGGGAGTGGACCTCAGACTGGTGGACTGTTCACCATTCTGTTGAGGAAACGTTCAACCCAAAGGGTCCCACTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000169446.2 ENSMUST00000172188.2 |
||
| CDS GCA 90 bp | CAGTTCCTTGGAAGCCATCCTCGCCAGTGTTGCTCACAGGAAACTTaGCCTGCCAGATGTTGGCATAATGCTGTCCTTTGGGCTGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: QFLGSHPRQCCSQET*PARCWHNAVLWAAV Trigger: AACTGCAGCCCAAAGGACAGCATTATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATGGCTTCCAAGGAACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
||
| CDS-3UTR CAA 90 bp | CCTGGTTGCCTCACAGCGGTGTTCCCAGATACTTGGGAGTTTCCTCTGGACAAATTGCTCACAGGAAACTaGCCCTGCCAGATGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PGCLTAVFPDTWEFPLDKLLTGN*PCQMLA Trigger: TGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAA...TTTGTCCAGAGGAAACTCCCAAGTATCTGGGAACACCGCTGTGAGGCAACCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS GCA 90 bp | GTGTCTCCAATTAGCTCCCTTGACAGGCAACCACCATGGAGCAGCTaGAACTGCCTGGTGGATATGCGTTTTCACTTGCTCGCTCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: VSPISSLDRQPPWSS*NCLVDMRFHLLAQH Trigger: ATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS GCA 90 bp | TCCCAGGTTGGATGCAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTaGACAGCGGTACCTATAGCAATAGGACTTATGGCACATGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQVGCRAIWCVLASS*TAVPIAIGLMAHVG Trigger: TCCTACATGTGCCATAAGTCCTATTGCTATAGGTACCGCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS GCA 90 bp | CACCATGGAGCAGCTGCAACTGCCTGGTGGATATGCGTTTTCACTTaGTCGCTCAACATGCCTTCAAAGACGAAAGAGTCTCCAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: HHGAAATAWWICVFT*SLNMPSKTKESPNF Trigger: GAAGTTTGGAGACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS GCA 90 bp | CTGCAACTGCCTGGTGGATATGCGTTTTCACTTGCTCGCTCAACATaGCTTCAAAGACGAAAGAGTCTCCAAACTTCTCAGCCTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQLPGGYAFSLARST*LQRRKSLQTSQPLS Trigger: TGACAGAGGCTGAGAAGTTTGGAGACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS GCA 90 bp | GTGTCTCCAATTAGCTCCCTTGACAGGCAACCACCATGGAGCAGCTaGAACCTCTGTCAAATAGCCAGTCGAGTTCACAAACTTCTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VSPISSLDRQPPWSS*NLCQIASRVHKLLK Trigger: TTTGAGAAGTTTGTGAACTCGACTGGCTATTTGACAGAGGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167338.8 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAATGTGAGAATTCACTCACAGGCCTAGACCTTCAGGTACCAGATTTAAACGGGGGCAGTTCCTaGGAAGCCATCCTCGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SCKCENSLTGLDLQVPDLNGGSS*EAILAS Trigger: ACTGGCGAGGATGGCTTCCAAGGAACTGCCCCCGTT...TAAATCTGGTACCTGAAGGTCTAGGCCTGTGAGTGAATTCTCACATTTACAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS TCA 90 bp | TACAATGAGTTTGTGACCCACAAGAACAGCTCGACAGAGTTGGACTaGCCTTATGGCACATGTAGGATCCACCCTTCTTCACTCGGTCTT | + |
|
Preference number: 5 (lower is better) Translates to: YNEFVTHKNSSTELD*PYGTCRIHPSSLGL Trigger: AAGACCGAGTGAAGAAGGGTGGATCCTACATGTGCCATAAGGTCAGTCCAACTCTGTCGAGCTGTTCTTGTGGGTCACAAACTCATTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
||
| CDS-3UTR CAA 90 bp | GTAGAGTCACTCCACAGGCATTCCTGTGTGTTCAGAACTCCAAACTTAAGTGTCGGAGAACCGGATGATTaGACCTGTGCAGAATACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VESLHRHSCVFRTPNLSVGEPDD*TCAEYW Trigger: CCAGTATTCTGCACAGGTCAAATCATCCGGTTCTCC...GACACTTAAGTTTGGAGTTCTGAACACACAGGAATGCCTGTGGAGTGACTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CAA 90 bp | TCTTGTAAATGTGAGAATTCACTCACAGGCCTAGACCTTCAGGTACCAGATTTACATCGGAATCCCAGGTaGGATGCAGAGCTATCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SCKCENSLTGLDLQVPDLHRNPR*DAELSG Trigger: ACCAGATAGCTCTGCATCCAACCTGGGATTCCGATG...TAAATCTGGTACCTGAAGGTCTAGGCCTGTGAGTGAATTCTCACATTTACAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
||
| CDS-3UTR CAA 90 bp | CCAAGAATTGCCAGGTTGGACTCTGAAATCACAGCTCACGGAGCAAAAATGCACGAAATAGACAGACATTaGAAATTAAGGGTGTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PRIARLDSEITAHGAKMHEIDRH*KLRVWS Trigger: GGACCACACCCTTAATTTCAAATGTCTGTCTATTTC...GTGCATTTTTGCTCCGTGAGCTGTGATTTCAGAGTCCAACCTGGCAATTCTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
||
| CDS GCA 72 bp | TCGCCTCCCGGGAGTAGCGCTGCGCCGCCGCCGAGCTaGCATGGGCCCCGGCCCTCTGGGGCGTTCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPPGSSAAPPPS*HGPRPSGAFRS Trigger: GCTGCGGAACGCCCCAGAGGGCCGGGGCCCATGGCAGCTCGGCGGCGGCGCAGCGCTACTCCCGGGAGGCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CCA 72 bp | AGCCGCACGAGCCCGCAAGGGACGCCGCACCTTCCCTaGCCTCGGCCTCATCGCTTCCCGCCACCTCGCACG | + |
|
Preference number: 6 (lower is better) Translates to: SRTSPQGTPHLP*PRPHRFPPPRT Trigger: CGTGCGAGGTGGCGGGAAGCGATGAGGCCGAGGCCAGGGAAGGTGCGGCGTCCCTTGCGGGCTCGTGCGGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CAA 90 bp | TCATCAGTGCCCATTGTGAATACTCCAGCAGGAATGGGGACCATCTaGGTGAGCGCGAGCGGTCGCGGGCCTGAGGTCAGGCCCGGGGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSVPIVNTPAGMGTI*VSASGRGPEVRPGA Trigger: CGCCCCGGGCCTGACCTCAGGCCCGCGACCGCTCGCGCTCACCAAGATGGTCCCCATTCCTGCTGGAGTATTCACAATGGGCACTGATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CAA 72 bp | CCCATTGTGAATACTCCAGCAGGAATGGGGACCATCTaGGTGAGCGCGAGCGGTCGCGGGCCTGAGGTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PIVNTPAGMGTI*VSASGRGPEVR Trigger: CCTGACCTCAGGCCCGCGACCGCTCGCGCTCACCAAGATGGTCCCCATTCCTGCTGGAGTATTCACAATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CAA 90 bp | CAGTCTGCGGTGGGCAGGTGGTCGGCTGCACATCGGAATCCCAGGTaGGATGCAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: QSAVGRWSAAHRNPR*DAELSGVFWLRAAQ Trigger: CTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCACCTGCCCACCGCAGACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS GCA 72 bp | CGGGGGCAGTTCCTTGGAAGCCATCCTCGCCAGTGTTaGTCACAGGAAACTTGCCCTGCCAGATGTTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: RGQFLGSHPRQC*SQETCPARCWH Trigger: ATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATGGCTTCCAAGGAACTGCCCCCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
||
| CDS GCA 72 bp | CAGGTGGTCGGCTGCACATCGGAATCCCAGGTTGGATaGAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QVVGCTSESQVG*RAIWCVLASSC Trigger: GCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
||
| CDS CCA 72 bp | TGGGCAGGTGGTCGGCTGCACATCGGAATCCCAGGTTaGATGCAGAGCTATCTGGTGTGTTCTGGCTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: WAGGRLHIGIPG*MQSYLVCSGFE Trigger: CTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCAGCCGACCACCTGCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
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| CDS CAA 72 bp | ACGGGGGCAGTTCCTTGGAAGCCATCCTCGCCAGTGTaGCTCACAGGAAACTTGCCCTGCCAGATGTTGGCA | + |
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Preference number: 6 (lower is better) Translates to: TGAVPWKPSSPV*LTGNLPCQMLA Trigger: TGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATGGCTTCCAAGGAACTGCCCCCGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS CAA 72 bp | GCCATTGGGAGGAAAGGCATCAACGGGGGCAGTTCCTaGGAAGCCATCCTCGCCAGTGTTGCTCACAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AIGRKGINGGSS*EAILASVAHRK Trigger: TTTCCTGTGAGCAACACTGGCGAGGATGGCTTCCAAGGAACTGCCCCCGTTGATGCCTTTCCTCCCAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS CAA 90 bp | AGAATACTGGAGTCCGGACCCTCTGGGTGTCTCCAATTAGCTCCCTaGACAGGCAACCACCATGGAGCAGCTGCAACTGCCTGGTGGATA | + |
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Preference number: 6 (lower is better) Translates to: RILESGPSGCLQLAP*TGNHHGAAATAWWI Trigger: TATCCACCAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACACCCAGAGGGTCCGGACTCCAGTATTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS CCA 72 bp | TGCACATCGGAATCCCAGGTTGGATGCAGAGCTATCTaGTGTGTTCTGGCTTCGAGCTGCACAGCGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: CTSESQVGCRAI*CVLASSCTAVP Trigger: AGGTACCGCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCCAACCTGGGATTCCGATGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
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| CDS TCA 72 bp | ACTCTCCTGGCAGGGGCTTCTCCATCCTGCCTGATCTaGGGATCATCAGTGCCCATTGTGAATACTCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TLLAGASPSCLI*GSSVPIVNTPA Trigger: TGCTGGAGTATTCACAATGGGCACTGATGATCCTCAGATCAGGCAGGATGGAGAAGCCCCTGCCAGGAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
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| CDS GCA 72 bp | TCCCTTGACAGGCAACCACCATGGAGCAGCTGCAACTaGCTGGTGGATATGCGTTTTCACTTGCTCGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: SLDRQPPWSSCN*LVDMRFHLLAQ Trigger: TTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS GCA 72 bp | GGAAGCCATCCTCGCCAGTGTTGCTCACAGGAAACTTaGCCTGCCAGATGTTGGCATAATGCTGTCCTTTGG | + |
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Preference number: 6 (lower is better) Translates to: GSHPRQCCSQET*PARCWHNAVLW Trigger: CCAAAGGACAGCATTATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTGGCGAGGATGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS TCA 72 bp | GCAACAGCATCGTTCCAGGAAACATGGAGAACCGGATaGTTTGACCTGTGCAGAATACTGGAGTCCGGACCC | + |
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Preference number: 6 (lower is better) Translates to: ATASFQETWRTG*FDLCRILESGP Trigger: GGGTCCGGACTCCAGTATTCTGCACAGGTCAAATCATCCGGTTCTCCATGTTTCCTGGAACGATGCTGTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS TCA 72 bp | GGACCCTTTGGGTTGAACGTTTCCTCAACAGAATGGTaGACAGTCCACCAGTCTGAGGTCCACTCCCACACA | + |
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Preference number: 6 (lower is better) Translates to: GPFGLNVSSTEW*TVHQSEVHSHT Trigger: TGTGTGGGAGTGGACCTCAGACTGGTGGACTGTTCACCATTCTGTTGAGGAAACGTTCAACCCAAAGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000169446.2 ENSMUST00000172188.2 |
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| CDS CCA 72 bp | GTGTCTCCAATTAGCTCCCTTGACAGGCAACCACCATaGAGCAGCTGCAACTGCCTGGTGGATATGCGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VSPISSLDRQPP*SSCNCLVDMRF Trigger: AAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS CCA 72 bp | GTGTCTCCAATTAGCTCCCTTGACAGGCAACCACCATaGAGCAGCTGCAACCTCTGTCAAATAGCCAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: VSPISSLDRQPP*SSCNLCQIASR Trigger: TCGACTGGCTATTTGACAGAGGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAATTGGAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167338.8 |
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| CDS GCA 72 bp | GGATGCAGAGCTATCTGGTGTGTTCTGGCTTCGAGCTaGACAGCGGTACCTATAGCAATAGGACTTATGGCA | + |
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Preference number: 6 (lower is better) Translates to: GCRAIWCVLASS*TAVPIAIGLMA Trigger: TGCCATAAGTCCTATTGCTATAGGTACCGCTGTGCAGCTCGAAGCCAGAACACACCAGATAGCTCTGCATCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
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| CDS CCA 72 bp | CAGTGTTGCTCACAGGAAACTTGCCCTGCCAGATGTTaGCATAATGCTGTCCTTTGGGCTGCAGTTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QCCSQETCPARC*HNAVLWAAVCC Trigger: GCAACAAACTGCAGCCCAAAGGACAGCATTATGCCAACATCTGGCAGGGCAAGTTTCCTGTGAGCAACACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS CAA 90 bp | CCACCATGGAGCAGCTGCAACTGCCTGGTGGATATGCGTTTTCACTaGCTCGCTCAACATGCCTTCAAAGACGAAAGAGTCTCCAAACTT | + |
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Preference number: 6 (lower is better) Translates to: PPWSSCNCLVDMRFH*LAQHAFKDERVSKL Trigger: AAGTTTGGAGACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCTCCATGGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS TCA 72 bp | CGTTTCCTCAACAGAATGGTGAACAGTCCACCAGTCTaGGGTCCACTCCCACACATTCCCCACTATGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: RFLNRMVNSPPV*GPLPHIPHYVV Trigger: TACAACATAGTGGGGAATGTGTGGGAGTGGACCTCAGACTGGTGGACTGTTCACCATTCTGTTGAGGAAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000169446.2 ENSMUST00000172188.2 |
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| CDS GCA 72 bp | GCAGCTGCAACTGCCTGGTGGATATGCGTTTTCACTTaGTCGCTCAACATGCCTTCAAAGACGAAAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: AAATAWWICVFT*SLNMPSKTKES Trigger: AGACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS GCA 72 bp | ATTAGCTCCCTTGACAGGCAACCACCATGGAGCAGCTaGAACCTCTGTCAAATAGCCAGTCGAGTTCACAAA | + |
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Preference number: 6 (lower is better) Translates to: ISSLDRQPPWSS*NLCQIASRVHK Trigger: TTTGTGAACTCGACTGGCTATTTGACAGAGGTTGCAGCTGCTCCATGGTGGTTGCCTGTCAAGGGAGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167338.8 |
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| CDS CCA 72 bp | ACACATTCCCCACTATGTTGTATAAGCCATAGCCATTaGGAGGAAAGGCATCAACGGGGGCAGTTCCTTGGA | + |
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Preference number: 6 (lower is better) Translates to: THSPLCCISHSH*EERHQRGQFLG Trigger: TCCAAGGAACTGCCCCCGTTGATGCCTTTCCTCCCAATGGCTATGGCTTATACAACATAGTGGGGAATGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 |
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| CDS CAA 72 bp | AGCAGCTGCAACTGCCTGGTGGATATGCGTTTTCACTaGCTCGCTCAACATGCCTTCAAAGACGAAAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SSCNCLVDMRFH*LAQHAFKDERV Trigger: GACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGGCAGTTGCAGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS TCA 72 bp | TTTGTGACCCACAAGAACAGCTCGACAGAGTTGGACTaGCCTTATGGCACATGTAGGATCCACCCTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: FVTHKNSSTELD*PYGTCRIHPSS Trigger: TGAAGAAGGGTGGATCCTACATGTGCCATAAGGTCAGTCCAACTCTGTCGAGCTGTTCTTGTGGGTCACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| CDS CAA 90 bp | CTCAGAAATAGACAGACATTTGAAATTAAGGGTGTGGTCCTAGACTaGAGCATGGAAGAGGCAGATGGCCCAACCTGTTTCACAGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: LRNRQTFEIKGVVLD*SMEEADGPTCFTGQ Trigger: TTGGCCTGTGAAACAGGTTGGGCCATCTGCCTCTTCCATGCTCAAGTCTAGGACCACACCCTTAATTTCAAATGTCTGTCTATTTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| CDS GCA 72 bp | CCTGGTGGATATGCGTTTTCACTTGCTCGCTCAACATaGCTTCAAAGACGAAAGAGTCTCCAAACTTCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PGGYAFSLARST*LQRRKSLQTSQ Trigger: CTGAGAAGTTTGGAGACTCTTTCGTCTTTGAAGGCATGTTGAGCGAGCAAGTGAAAACGCATATCCACCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032191.16 |
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| CDS CAA 72 bp | AGACAGACATTTGAAATTAAGGGTGTGGTCCTAGACTaGAGCATGGAAGAGGCAGATGGCCCAACCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: RQTFEIKGVVLD*SMEEADGPTCF Trigger: GAAACAGGTTGGGCCATCTGCCTCTTCCATGCTCAAGTCTAGGACCACACCCTTAATTTCAAATGTCTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169446.2 |
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| CDS TCA 72 bp | CAGTCGAGTTCACAAACTTCTCAAAATCCGCATTGCTaGCTTCATAGGCGTCCATGTAAAAGCCATCAACAG | + |
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Preference number: 6 (lower is better) Translates to: QSSSQTSQNPHC*LHRRPCKSHQQ Trigger: CTGTTGATGGCTTTTACATGGACGCCTATGAAGTCAGCAATGCGGATTTTGAGAAGTTTGTGAACTCGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032191.16 ENSMUST00000167338.8 ENSMUST00000172188.2 |
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