Pregenerated sensors for SULT6B2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048473Ensembl transcript IDs: ENSMUST00000111768.3, ENSMUST00000156662.8
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACTCCTTCATGCATCTGCGATTGCGCGTACTCCATCACGCATTCTaGGAATGCGCATACTCCTTCAAGCATCTGCCCACGTCACTGTTT | + |
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Preference number: 1 (lower is better) Translates to: YSFMHLRLRVLHHAF*ECAYSFKHLPTSLF Trigger: AAACAGTGACGTGGGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGCGCAATCGCAGATGCATGAAGGAGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR TCA 90 bp | GGGATCACAATTTTCTTTGGCCGCATTACTTTTCATTTCACTGAATaGCGTACTCCGAGCGATCTTAGCCATCTCGCTGTCATTCACGTC | + |
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Preference number: 1 (lower is better) Translates to: GITIFFGRITFHFTE*RTPSDLSHLAVIHV Trigger: GACGTGAATGACAGCGAGATGGCTAAGATCGCTCGGAGTACGTCATTCAGTGAAATGAAAAGTAATGCGGCCAAAGAAAATTGTGATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR TCA 90 bp | TTTCTGAACACCAGGTTCCTGTCGGACGTGAGGGCACAGATGACGTaGTTGGGATCACAATTTTCTTTGGCCGCATTACTTTTCATTTCA | + |
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Preference number: 1 (lower is better) Translates to: FLNTRFLSDVRAQMT*LGSQFSLAALLFIS Trigger: TGAAATGAAAAGTAATGCGGCCAAAGAAAATTGTGATCCCAATCACGTCATCTGTGCCCTCACGTCCGACAGGAACCTGGTGTTCAGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCGTACTCCATCACGCATTCTGCGAATGCGCATACTCCTTCAAGCATCTGCCCCACCACTCCTTTTCTaGACACCAGGTTCCTGTCGG | + |
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Preference number: 2 (lower is better) Translates to: ARTPSRILRMRILLQASAPPLLF*TPGSCR Trigger: CCGACAGGAACCTGGTGTTCAGAAAAGGAGTGGTGG...GGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR TCA 90 bp | GCGCGTACTCCATCACGCATTCTGCGAATGCGCATACTCCTTCAAGCATCTGCCAGGGCACAGATGACGTaGTTGGGATCACAATTTTCT | + |
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Preference number: 2 (lower is better) Translates to: ARTPSRILRMRILLQASARAQMT*LGSQFS Trigger: AGAAAATTGTGATCCCAATCACGTCATCTGTGCCCT...GGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR TCA 90 bp | GGACCCAGTCTGCAGGAGAGCATGCCTACTCAAAACACTATAAAGAACCAGAAGCGTCCTTTCCACGTCTaGGCAGCTGATGGAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: GPSLQESMPTQNTIKNQKRPFHV*AADGGF Trigger: AAATCCTCCATCAGCTGCTCAGACGTGGAAAGGACG...CTTCTGGTTCTTTATAGTGTTTTGAGTAGGCATGCTCTCCTGCAGACTGGGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR TCA 90 bp | GCGTACTCCATCACGCATTCTGCGAATGCGCATACTCCTTCAAGCATCTGCCCATACTTTTCATTTCACTaGATGACGTACTCCGAGCGA | + |
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Preference number: 2 (lower is better) Translates to: AYSITHSANAHTPSSICPYFSFH*MTYSER Trigger: TCGCTCGGAGTACGTCATTCAGTGAAATGAAAAGTA...TGGGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR TCA 90 bp | ATAAAATTTTCTCAGGTATGTGACTTAATCCCTCTCGTCCTTTCCACGTCTGAGCGTCCTTTCCACGTCTaGGCAGCTGATGGAGGATTT | + |
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Preference number: 2 (lower is better) Translates to: IKFSQVCDLIPLVLSTSERPFHV*AADGGF Trigger: AAATCCTCCATCAGCTGCTCAGACGTGGAAAGGACG...CTCAGACGTGGAAAGGACGAGAGGGATTAAGTCACATACCTGAGAAAATTTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| 3UTR CAA 90 bp | AACTCCCTCTTTGAGTTCAGCATTAGGAGCAATCATAGTACAATCTaGATTTCTCAGCAAGGCTTAGGAGATTCTACTACAGCGGCTGTC | + |
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Preference number: 2 (lower is better) Translates to: NSLFEFSIRSNHSTI*ISQQGLGDSTTAAV Trigger: GACAGCCGCTGTAGTAGAATCTCCTAAGCCTTGCTGAGAAATCAAGATTGTACTATGATTGCTCCTAATGCTGAACTCAAAGAGGGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR CAA 90 bp | AACTTCTTGCAGAATTATCAACTATATACAAAAGACCCCAACAGATaGGTCACTAAACATCCACCTAGGTTCATAATACACTTAGGGTAT | + |
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Preference number: 2 (lower is better) Translates to: NFLQNYQLYTKDPNR*VTKHPPRFIIHLGY Trigger: ATACCCTAAGTGTATTATGAACCTAGGTGGATGTTTAGTGACCAATCTGTTGGGGTCTTTTGTATATAGTTGATAATTCTGCAAGAAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR CAA 90 bp | TGTAACAAATGCATGTGCACAGAAGATTTGTACAAACTGAACTTCTaGCAGAATTATCAACTATATACAAAAGACCCCAACAGATTGGTC | + |
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Preference number: 2 (lower is better) Translates to: CNKCMCTEDLYKLNF*QNYQLYTKDPNRLV Trigger: GACCAATCTGTTGGGGTCTTTTGTATATAGTTGATAATTCTGCAAGAAGTTCAGTTTGTACAAATCTTCTGTGCACATGCATTTGTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR GCA 72 bp | CTGCGATTGCGCGTACTCCATCACGCATTCTGCGAATaGGCATACTCCTTCAAGCATCTGCCCACGTCACTG | + |
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Preference number: 3 (lower is better) Translates to: LRLRVLHHAFCE*AYSFKHLPTSL Trigger: CAGTGACGTGGGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGCGCAATCGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR GCA 72 bp | ATGCATCTGCGATTGCGCGTACTCCATCACGCATTCTaGGAATGCGCATACTCCTTCAAGCATCTGCCCACG | + |
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Preference number: 3 (lower is better) Translates to: MHLRLRVLHHAF*ECAYSFKHLPT Trigger: CGTGGGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGCGCAATCGCAGATGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR TCA 72 bp | ACCAGGTTCCTGTCGGACGTGAGGGCACAGATGACGTaGTTGGGATCACAATTTTCTTTGGCCGCATTACTT | + |
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Preference number: 3 (lower is better) Translates to: TRFLSDVRAQMT*LGSQFSLAALL Trigger: AAGTAATGCGGCCAAAGAAAATTGTGATCCCAATCACGTCATCTGTGCCCTCACGTCCGACAGGAACCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR CCA 72 bp | GCATCGGTAATACACCTTACAGAGAGCTGCAGCAACTaGATTAGTGTTAGGACCCAGTCTGCAGGAGAGCAT | + |
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Preference number: 3 (lower is better) Translates to: ASVIHLTESCSN*ISVRTQSAGEH Trigger: ATGCTCTCCTGCAGACTGGGTCCTAACACTAATCCAGTTGCTGCAGCTCTCTGTAAGGTGTATTACCGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR TCA 72 bp | CCAATGAATGAGACCAGGTATTGGGTTTCTCCCGCTTaGGAAGATAGTATCTGTTGTTATTGTGGTTTCGAA | + |
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Preference number: 3 (lower is better) Translates to: PMNETRYWVSPA*EDSICCYCGFE Trigger: TTCGAAACCACAATAACAACAGATACTATCTTCTCAAGCGGGAGAAACCCAATACCTGGTCTCATTCATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR-3UTR CAA 90 bp | CAGAATTATCAACTATATACAAAAGACCCCAACAGATTGGTCACTAAACATCCAGGATCACAATTTTCTTaGGCCGCATTACTTTTCATT | + |
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Preference number: 3 (lower is better) Translates to: QNYQLYTKDPNRLVTKHPGSQFS*AALLFI Trigger: AATGAAAAGTAATGCGGCCAAAGAAAATTGTGATCC...TGGATGTTTAGTGACCAATCTGTTGGGGTCTTTTGTATATAGTTGATAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | GCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGACGGGAATGCGCTCAATaGCTTCTGCCAGCCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: AFHINKAYLHVSQAPRGRRECAQ*LLPANG Trigger: CCCATTGGCTGGCAGAAGTCATTGAGCGCATTCCCG...TCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | CGGAGTGAAGTAGTTTATCCAATCACCCACCACTCCTTTTCTGAACACCAGGTTCGGGAATGCGCTCAATaGCTTCTGCCAGCCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: RSEVVYPITHHSFSEHQVRECAQ*LLPANG Trigger: CCCATTGGCTGGCAGAAGTCATTGAGCGCATTCCCG...AACCTGGTGTTCAGAAAAGGAGTGGTGGGTGATTGGATAAACTACTTCACTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR GCA 90 bp | GCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGAGCGCTCAATGACTTCTaGCAGCCAATGGGTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: AFHINKAYLHVSQAPRGRALNDF*QPMGAR Trigger: TCTGGCACCCATTGGCTGGCAGAAGTCATTGAGCGC...TCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR GCA 90 bp | ACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGAGAACGAACTGCCAGCCAATGGGTaGCAGATTTTGGGTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: TSIKHIYMFPRRHAAENELPANG*QILGRK Trigger: TTTCCTACCCAAAATCTGGCACCCATTGGCTGGCAG...TTCGTTCTCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR GCA 90 bp | CGGAGTGAAGTAGTTTATCCAATCACCCACCACTCCTTTTCTGAACACCAGGTTCTGCCAGCCAATGGGTaGCAGATTTTGGGTAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RSEVVYPITHHSFSEHQVLPANG*QILGRK Trigger: TTTCCTACCCAAAATCTGGCACCCATTGGCTGGCAG...AACCTGGTGTTCAGAAAAGGAGTGGTGGGTGATTGGATAAACTACTTCACTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR GCA 90 bp | GCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGAACTCCTTCAAGCATCTaGCCACGTCACTGTTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: AFHINKAYLHVSQAPRGRTPSSI*PRHCFS Trigger: TGAGAAACAGTGACGTGGGCAGATGCTTGAAGGAGT...TCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS-3UTR CCA 90 bp | AAATTTTCTCAGGTATGTGACTTAATCCCTCTCGTCCTTTCCACGTCTGAGCAGCCGTGGAAGGGAGATTaGGGTTGTCCCTGTAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: KFSQVCDLIPLVLSTSEQPWKGD*GCPCSS Trigger: ACTACTACAGGGACAACCCCAATCTCCCTTCCACGG...CTGCTCAGACGTGGAAAGGACGAGAGGGATTAAGTCACATACCTGAGAAAATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | GAACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACCACCACTCCTTTTCTaGACACCAGGTTCCTGTCGG | + |
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Preference number: 4 (lower is better) Translates to: ELSAFHINKAYLHVSQAPPPLLF*TPGSCR Trigger: CCGACAGGAACCTGGTGTTCAGAAAAGGAGTGGTGG...TGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS-3UTR TCA 90 bp | GCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGAACCAAGGAGTTCTTCTaGAGACATGGTAGAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: AFHINKAYLHVSQAPRGRTKEFF*RHGREE Trigger: TTCTTCTCTACCATGTCTTCAGAAGAACTCCTTGGT...TCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR GCA 90 bp | TATCAACTATATACAAAAGACCCCAACAGATTGGTCACTAAACATCCACCTAGGGCGCTCAATGACTTCTaGCAGCCAATGGGTGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: YQLYTKDPNRLVTKHPPRALNDF*QPMGAR Trigger: TCTGGCACCCATTGGCTGGCAGAAGTCATTGAGCGC...CCTAGGTGGATGTTTAGTGACCAATCTGTTGGGGTCTTTTGTATATAGTTGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR CCA 90 bp | AACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACCAGCCCATGTTTCCGTaGAAGGGAGATTGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: NYLLSTSIKHIYMFPRRHQPMFP*KGDWGC Trigger: ACAACCCCAATCTCCCTTCCACGGAAACATGGGCTG...GTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR CCA 90 bp | GAACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACAGCCCATGTTTCCGTaGAAGGGAGATTGGGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: ELSAFHINKAYLHVSQAPQPMFP*KGDWGC Trigger: ACAACCCCAATCTCCCTTCCACGGAAACATGGGCTG...TGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | AACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACCGCAGTCATCTCCTTTaGGGAACAGCTCTAAAAACG | + |
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Preference number: 4 (lower is better) Translates to: NYLLSTSIKHIYMFPRRHRSHLL*GTALKT Trigger: CGTTTTTAGAGCTGTTCCTCAAAGGAGATGACTGCG...GTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR CCA 90 bp | GAACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCATGTAGTAGTGGAACATaGAGACGGCTGTATCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: ELSAFHINKAYLHVSQAPCSSGT*RRLYPS Trigger: CGAAGGATACAGCCGTCTCCATGTTCCACTACTACA...TGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR CCA 90 bp | AACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACTGTAGTAGTGGAACATaGAGACGGCTGTATCCTTCG | + |
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Preference number: 4 (lower is better) Translates to: NYLLSTSIKHIYMFPRRHCSSGT*RRLYPS Trigger: CGAAGGATACAGCCGTCTCCATGTTCCACTACTACA...GTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR CCA 90 bp | CAGAATTATCAACTATATACAAAAGACCCCAACAGATTGGTCACTAAACATCCAAGAACATGGCCAGGTTaGGACACAGGCAAGGAGACG | + |
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Preference number: 4 (lower is better) Translates to: QNYQLYTKDPNRLVTKHPRTWPG*DTGKET Trigger: CGTCTCCTTGCCTGTGTCCCAACCTGGCCATGTTCT...TGGATGTTTAGTGACCAATCTGTTGGGGTCTTTTGTATATAGTTGATAATTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | AACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCACAGGGCACAGATGACGTaGTTGGGATCACAATTTTCT | + |
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Preference number: 4 (lower is better) Translates to: NYLLSTSIKHIYMFPRRHRAQMT*LGSQFS Trigger: AGAAAATTGTGATCCCAATCACGTCATCTGTGCCCT...GTGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS-3UTR CCA 90 bp | AAATTTTCTCAGGTATGTGACTTAATCCCTCTCGTCCTTTCCACGTCTGAGCAGATGGGTGCCAGATTTTaGGTAGGAAACCAGAAATAT | + |
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Preference number: 4 (lower is better) Translates to: KFSQVCDLIPLVLSTSEQMGARF*VGNQKY Trigger: ATATTTCTGGTTTCCTACCCAAAATCTGGCACCCAT...CTGCTCAGACGTGGAAAGGACGAGAGGGATTAAGTCACATACCTGAGAAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | ACATTTGTAATTTGTGGTAACATTAAGAAAATGCAGGCGTGCGCAACCACGTTCACCAAGGAGTTCTTCTaGAGACATGGTAGAGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: TFVICGNIKKMQACATTFTKEFF*RHGREE Trigger: TTCTTCTCTACCATGTCTTCAGAAGAACTCCTTGGT...GAACGTGGTTGCGCACGCCTGCATTTTCTTAATGTTACCACAAATTACAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR TCA 90 bp | ATAAAATTTTCTCAGGTATGTGACTTAATCCCTCTCGTCCTTTCCACGTCTGAGTACTTTTCATTTCACTaGATGACGTACTCCGAGCGA | + |
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Preference number: 4 (lower is better) Translates to: IKFSQVCDLIPLVLSTSEYFSFH*MTYSER Trigger: TCGCTCGGAGTACGTCATTCAGTGAAATGAAAAGTA...CTCAGACGTGGAAAGGACGAGAGGGATTAAGTCACATACCTGAGAAAATTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS-3UTR CCA 90 bp | ATAAAATTTTCTCAGGTATGTGACTTAATCCCTCTCGTCCTTTCCACGTCTGAGATGGGTGCCAGATTTTaGGTAGGAAACCAGAAATAT | + |
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Preference number: 4 (lower is better) Translates to: IKFSQVCDLIPLVLSTSEMGARF*VGNQKY Trigger: ATATTTCTGGTTTCCTACCCAAAATCTGGCACCCAT...CTCAGACGTGGAAAGGACGAGAGGGATTAAGTCACATACCTGAGAAAATTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| 3UTR CAA 72 bp | TTTGAGTTCAGCATTAGGAGCAATCATAGTACAATCTaGATTTCTCAGCAAGGCTTAGGAGATTCTACTACA | + |
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Preference number: 4 (lower is better) Translates to: FEFSIRSNHSTI*ISQQGLGDSTT Trigger: TGTAGTAGAATCTCCTAAGCCTTGCTGAGAAATCAAGATTGTACTATGATTGCTCCTAATGCTGAACTCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| 3UTR CAA 72 bp | CAGAATTATCAACTATATACAAAAGACCCCAACAGATaGGTCACTAAACATCCACCTAGGTTCATAATACAC | + |
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Preference number: 4 (lower is better) Translates to: QNYQLYTKDPNR*VTKHPPRFIIH Trigger: GTGTATTATGAACCTAGGTGGATGTTTAGTGACCAATCTGTTGGGGTCTTTTGTATATAGTTGATAATTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS-3UTR CAA 90 bp | GCGTACTCCATCACGCATTCTGCGAATGCGCATACTCCTTCAAGCATCTGCCCAAAGAACATGGCCAGGTaGGGACACAGGCAAGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: AYSITHSANAHTPSSICPKNMAR*GHRQGD Trigger: GTCTCCTTGCCTGTGTCCCAACCTGGCCATGTTCTT...TGGGCAGATGCTTGAAGGAGTATGCGCATTCGCAGAATGCGTGATGGAGTACGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS CCA 90 bp | GGAACAGCTCTAAAAACGCAGCCCATGTTTCCGTGGAAGGGAGATTaGGGTTGTCCCTGTAGTAGTGGAACATGGAGACGGCTGTATCCT | + |
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Preference number: 5 (lower is better) Translates to: GTALKTQPMFPWKGD*GCPCSSGTWRRLYP Trigger: AGGATACAGCCGTCTCCATGTTCCACTACTACAGGGACAACCCCAATCTCCCTTCCACGGAAACATGGGCTGCGTTTTTAGAGCTGTTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS GCA 90 bp | AGAAGTGAGTGTGATGCCAGCGTCGGGAATGCGCTCAATGACTTCTaGCAGCCAATGGGTGCCAGATTTTGGGTAGGAAACCAGAAATAT | + |
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Preference number: 5 (lower is better) Translates to: RSECDASVGNALNDF*QPMGARFWVGNQKY Trigger: ATATTTCTGGTTTCCTACCCAAAATCTGGCACCCATTGGCTGGCAGAAGTCATTGAGCGCATTCCCGACGCTGGCATCACACTCACTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS TCA 90 bp | AACTCAAAACGTGATCAAACCAGGAACCATACACAACATCTCCTTTaGGGAACAGCTCTAAAAACGCAGCCCATGTTTCCGTGGAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: NSKRDQTRNHTQHLL*GTALKTQPMFPWKG Trigger: TCCCTTCCACGGAAACATGGGCTGCGTTTTTAGAGCTGTTCCTCAAAGGAGATGTTGTGTATGGTTCCTGGTTTGATCACGTTTTGAGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS CCA 90 bp | GGGAATGCGCTCAATGACTTCTGCCAGCCAATGGGTGCCAGATTTTaGGTAGGAAACCAGAAATATGTCATCTTCTCTAGCATCAAAAGA | + |
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Preference number: 5 (lower is better) Translates to: GNALNDFCQPMGARF*VGNQKYVIFSSIKR Trigger: TCTTTTGATGCTAGAGAAGATGACATATTTCTGGTTTCCTACCCAAAATCTGGCACCCATTGGCTGGCAGAAGTCATTGAGCGCATTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR CAA 90 bp | ATAAAGCATATTTACATGTTTCCCAGGCGCCACGCGGCAGAGAACGAAATCCACGGATCACAATTTTCTTaGGCCGCATTACTTTTCATT | + |
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Preference number: 5 (lower is better) Translates to: IKHIYMFPRRHAAENEIHGSQFS*AALLFI Trigger: AATGAAAAGTAATGCGGCCAAAGAAAATTGTGATCC...GTGGATTTCGTTCTCTGCCGCGTGGCGCCTGGGAAACATGTAAATATGCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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| CDS-3UTR CAA 90 bp | GAACTATCTGCTTTCCACATCAATAAAGCATATTTACATGTTTCCCAGGCGCCAAATGGGTGCCAGATTTaGGGTAGGAAACCAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: ELSAFHINKAYLHVSQAPNGCQI*GRKPEI Trigger: TATTTCTGGTTTCCTACCCAAAATCTGGCACCCATT...TGGCGCCTGGGAAACATGTAAATATGCTTTATTGATGTGGAAAGCAGATAGTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS-3UTR CAA 90 bp | ACATTTGTAATTTGTGGTAACATTAAGAAAATGCAGGCGTGCGCAACCACGTTCAATGGGTGCCAGATTTaGGGTAGGAAACCAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: TFVICGNIKKMQACATTFNGCQI*GRKPEI Trigger: TATTTCTGGTTTCCTACCCAAAATCTGGCACCCATT...GAACGTGGTTGCGCACGCCTGCATTTTCTTAATGTTACCACAAATTACAAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS TCA 72 bp | GGCAAGGAGACGGGAGGCAGCCGCAGTCATCTCCTTTaGGGAACAGCTCTAAAAACGCAGCCCATGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: GKETGGSRSHLL*GTALKTQPMFP Trigger: CGGAAACATGGGCTGCGTTTTTAGAGCTGTTCCTCAAAGGAGATGACTGCGGCTGCCTCCCGTCTCCTTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156662.8 |
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| CDS CCA 72 bp | CTAAAAACGCAGCCCATGTTTCCGTGGAAGGGAGATTaGGGTTGTCCCTGTAGTAGTGGAACATGGAGACGG | + |
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Preference number: 6 (lower is better) Translates to: LKTQPMFPWKGD*GCPCSSGTWRR Trigger: CCGTCTCCATGTTCCACTACTACAGGGACAACCCCAATCTCCCTTCCACGGAAACATGGGCTGCGTTTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111768.3 ENSMUST00000156662.8 |
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| CDS TCA 72 bp | CGTGATCAAACCAGGAACCATACACAACATCTCCTTTaGGGAACAGCTCTAAAAACGCAGCCCATGTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: RDQTRNHTQHLL*GTALKTQPMFP Trigger: CGGAAACATGGGCTGCGTTTTTAGAGCTGTTCCTCAAAGGAGATGTTGTGTATGGTTCCTGGTTTGATCACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111768.3 |
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