Pregenerated sensors for SULT6B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038045Ensembl transcript IDs: ENSMUST00000042683.7, ENSMUST00000159710.2, ENSMUST00000169544.8
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCGGAAGAGGAAGGGCCCAATGGCACCATGTGTCTCTTGAGAATTTaGTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGATGGTTTCTAT | + |
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Preference number: 1 (lower is better) Translates to: AEEEGPNGTMCLLRI*SHGQEGALSGDGFY Trigger: ATAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 90 bp | GTTTCCAATCACCAACCTCACCTTTGCGGAAGAGGAAGGGCCCAATaGCACCATGTGTCTCTTGAGAATTTGCTCTCATGGCCAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: VSNHQPHLCGRGRAQ*HHVSLENLLSWPGR Trigger: CCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGCAAAGGTGAGGTTGGTGATTGGAAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR GCA 90 bp | CAGGCAATATGCTTCATACTTCAGCTTGTCTCCGAGGGACGTGCCTaGCAAACACTCTTTGAATCTCTCATCCATTTCCTGGTTCTGGGT | + |
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Preference number: 1 (lower is better) Translates to: QAICFILQLVSEGRA*QTLFESLIHFLVLG Trigger: ACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGAGACAAGCTGAAGTATGAAGCATATTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 90 bp | AATGTCATGTCTCTTGAGGGAAGCACCTCTAGAGGCCTGCATGCATaGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACT | + |
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Preference number: 1 (lower is better) Translates to: NVMSLEGSTSRGLHA*STQSRRRGIYPEAT Trigger: AGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGACATGACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR GCA 90 bp | AGAAGTATAATGTCATGTCTCTTGAGGGAAGCACCTCTAGAGGCCTaGATGCATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTG | + |
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Preference number: 1 (lower is better) Translates to: RSIMSCLLREAPLEA*MHGVPRVDEEGFIL Trigger: CAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGACATGACATTATACTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CCA 90 bp | GTGCCTGCCAAACACTCTTTGAATCTCTCATCCATTTCCTGGTTCTaGGTTTCGTTGAACAAACGTTTCCAATCACCAACCTCACCTTTG | + |
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Preference number: 1 (lower is better) Translates to: VPAKHSLNLSSISWF*VSLNKRFQSPTSPL Trigger: CAAAGGTGAGGTTGGTGATTGGAAACGTTTGTTCAACGAAACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 90 bp | GTGTCTCTTGAGAATTTGCTCTCATGGCCAGGAAGGTGCTCTGAGTaGAGATGGTTTCTATTTGTTCGTCAGTTAAAGAGAAACCAAGGA | + |
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Preference number: 1 (lower is better) Translates to: VSLENLLSWPGRCSE*RWFLFVRQLKRNQG Trigger: TCCTTGGTTTCTCTTTAACTGACGAACAAATAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 90 bp | CTTGAGAATTTGCTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGATaGTTTCTATTTGTTCGTCAGTTAAAGAGAAACCAAGGAATTCAG | + |
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Preference number: 1 (lower is better) Translates to: LENLLSWPGRCSEWR*FLFVRQLKRNQGIQ Trigger: CTGAATTCCTTGGTTTCTCTTTAACTGACGAACAAATAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR TCA 90 bp | CCAAGAAACTTGTCCCTTTATGAATTGCCTGAAGAATTCATCCCATaGGGCATAGCTGGGAATATCGGGGACATCATTATGAAAATGAAA | + |
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Preference number: 1 (lower is better) Translates to: PRNLSLYELPEEFIP*GIAGNIGDIIMKMK Trigger: TTTCATTTTCATAATGATGTCCCCGATATTCCCAGCTATGCCTCATGGGATGAATTCTTCAGGCAATTCATAAAGGGACAAGTTTCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR TCA 90 bp | TCAATCTTTCTAGAATGTTCTCTACATCCTCCTGTTAGTTTCACGTaGCTGCTTATGACCCTGCAACAGAAAAATCTGTATGGTACAAAA | + |
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Preference number: 1 (lower is better) Translates to: SIFLECSLHPPVSFT*LLMTLQQKNLYGTK Trigger: TTTTGTACCATACAGATTTTTCTGTTGCAGGGTCATAAGCAGTCACGTGAAACTAACAGGAGGATGTAGAGAACATTCTAGAAAGATTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CAA 90 bp | CTCACCTTTGCGGAAGAGGAAGGGCCCAATGGCACCATGTGTCTCTaGAGAATTTGCTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGAT | + |
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Preference number: 2 (lower is better) Translates to: LTFAEEEGPNGTMCL*RICSHGQEGALSGD Trigger: ATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGCAAAGGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CAA 90 bp | TGCGGAAGAGGAAGGGCCCAATGGCACCATGTGTCTCTTGAGAATTaGCTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGATGGTTTCTA | + |
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Preference number: 2 (lower is better) Translates to: CGRGRAQWHHVSLEN*LSWPGRCSEWRWFL Trigger: TAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCAGCTTGGCCAGAGTTAAGCCAGGCAATATGCTTCATACTTCAGCTTGTCGCCAGGAAGGTGCTCTaGGTGGAGATGGTTTCTATT | + |
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Preference number: 2 (lower is better) Translates to: QPAWPELSQAICFILQLVARKVL*VEMVSI Trigger: AATAGAAACCATCTCCACTCAGAGCACCTTCCTGGC...GACAAGCTGAAGTATGAAGCATATTGCCTGGCTTAACTCTGGCCAAGCTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR GCA 90 bp | CCAGCCAGCTTGGCCAGAGTTAAGCCAGGCAATATGCTTCATACTTCAGCTTGTTCCGAGGGACGTGCCTaGCAAACACTCTTTGAATCT | + |
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Preference number: 2 (lower is better) Translates to: PASLARVKPGNMLHTSACSEGRA*QTLFES Trigger: AGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGA...ACAAGCTGAAGTATGAAGCATATTGCCTGGCTTAACTCTGGCCAAGCTGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CAA 90 bp | TGGACTGAGGTAGCTTGTCATAGTGGAGGTGGGTTGTCAGGATCCTaGGTGATGGGAAGAGTTTCATTCTCTGATATTTCTCGGCGTCAC | + |
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Preference number: 2 (lower is better) Translates to: WTEVACHSGGGLSGS*VMGRVSFSDISRRH Trigger: GTGACGCCGAGAAATATCAGAGAATGAAACTCTTCCCATCACCAAGGATCCTGACAACCCACCTCCACTATGACAAGCTACCTCAGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCAGCTTGGCCAGAGTTAAGCCAGGCAATATGCTTCATACTTCAGCTTGTCCTCTCATCCATTTCCTaGTTCTGGGTTTCGTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: QPAWPELSQAICFILQLVLSSIS*FWVSLN Trigger: GTTCAACGAAACCCAGAACCAGGAAATGGATGAGAG...GACAAGCTGAAGTATGAAGCATATTGCCTGGCTTAACTCTGGCCAAGCTGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CAA 90 bp | TCATACTTCAGCTTGTCTCCGAGGGACGTGCCTGCCAAACACTCTTaGAATCTCTCATCCATTTCCTGGTTCTGGGTTTCGTTGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: SYFSLSPRDVPAKHS*NLSSISWFWVSLNK Trigger: TTTGTTCAACGAAACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGAGACAAGCTGAAGTATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CAA 90 bp | TTTGCCTCAACGATGGTGTTAAGTAGAAGTATAATGTCATGTCTCTaGAGGGAAGCACCTCTAGAGGCCTGCATGCATGGAGTACCCAGA | + |
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Preference number: 2 (lower is better) Translates to: FASTMVLSRSIMSCL*REAPLEACMHGVPR Trigger: TCTGGGTACTCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGACATGACATTATACTTCTACTTAACACCATCGTTGAGGCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CAA 90 bp | TTGGCATTTCCAAAGACCCATGATCACCATAATTTCTTCGGGGTCTaGGAACATCTAGCTGAAGTGTTAGCCACTGAAAGGGGTGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LAFPKTHDHHNFFGV*EHLAEVLATERGAS Trigger: AGAGGCACCCCTTTCAGTGGCTAACACTTCAGCTAGATGTTCCAAGACCCCGAAGAAATTATGGTGATCATGGGTCTTTGGAAATGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR TCA 90 bp | TCTCTTGAGAATTTGCTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGATGGTTTTGTCAGGATCCTTGGTaGTGGGAAGAGTTTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: SLENLLSWPGRCSEWRWFCQDPW*WEEFHS Trigger: AGAATGAAACTCTTCCCATCACCAAGGATCCTGACA...AAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCATGCATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCATTTGGAAGCCCATTTTaGTCTGTGTTTGACTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: GLHAWSTQSRRRGIYPEAFGSPF*SVFDSR Trigger: TCTAGAGTCAAACACAGACCAAAATGGGCTTCCAAA...TGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CAA 90 bp | AAACACTCTTTGAATCTCTCATCCATTTCCTGGTTCTGGGTTTCGTaGAACAAACGTTTCCAATCACCAACCTCACCTTTGCGGAAGAGG | + |
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Preference number: 2 (lower is better) Translates to: KHSLNLSSISWFWVS*NKRFQSPTSPLRKR Trigger: CCTCTTCCGCAAAGGTGAGGTTGGTGATTGGAAACGTTTGTTCAACGAAACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR TCA 90 bp | GTACACCCAATCTTATCAACTCCCAATATTCTCCACGAGTTGGTGAGTGTTTTGCTTTTAAAGCTCGGCTaGCTTCACACTTGTAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: VHPILSTPNILHELVSVLLLKLG*LHTCSK Trigger: CTTGCTACAAGTGTGAAGTCAGCCGAGCTTTAAAAG...CAAAACACTCACCAACTCGTGGAGAATATTGGGAGTTGATAAGATTGGGTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTGCTTTGCTTGATGGTTaGAGTCAAGGTCTGATTGAA | + |
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Preference number: 2 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSALLDG*SQGLIE Trigger: TTCAATCAGACCTTGACTCCAACCATCAAGCAAAGC...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR TCA 90 bp | ACCGCTGTATCCTTAGGGTTTCGAAATATCACCAATATCTTGGCTTTGTTCTTGAAGAGTTTCATTCTCTaGTATTTCTCGGCGTCACCA | + |
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Preference number: 2 (lower is better) Translates to: TAVSLGFRNITNILALFLKSFIL*YFSASP Trigger: TGGTGACGCCGAGAAATATCAGAGAATGAAACTCTT...CAAGAACAAAGCCAAGATATTGGTGATATTTCGAAACCCTAAGGATACAGCGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTCATAATCATGTTACATaGTTATTGTCACGCGACTGT | + |
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Preference number: 2 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSHNHVT*LLSRDC Trigger: ACAGTCGCGTGACAATAATCATGTAACATGATTATG...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR CCA 90 bp | CATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACTTGCAGTTACTACTACAAATACTTaGACCGATAGTGAGAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: HGVPRVDEEGFILKQLAVTTTNT*TDSEKF Trigger: AAACTTCTCACTATCGGTCCAAGTATTTGTAGTAGT...AACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CAA 90 bp | GAGAAAATGCAAATACAGCATTTGGAAGCCCATTTTGGTCTGTGTTaGACTCTAGAACAACACACTGACAGCAATGTTCCAATTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: EKMQIQHLEAHFGLC*TLEQHTDSNVPILQ Trigger: TTGAAGAATTGGAACATTGCTGTCAGTGTGTTGTTCTAGAGTCAAACACAGACCAAAATGGGCTTCCAAATGCTGTATTTGCATTTTCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR TCA 72 bp | TTGGGGAAGAGACCATGGGAAGCAGACACTACCAGCTaGGCAAGCCAGCAGGTGTGTTCCTGTTGCTTTGCT | + |
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Preference number: 3 (lower is better) Translates to: LGKRPWEADTTS*ASQQVCSCCFA Trigger: AGCAAAGCAACAGGAACACACCTGCTGGCTTGCTCAGCTGGTAGTGTCTGCTTCCCATGGTCTCTTCCCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR GCA 72 bp | GAAGGGCCCAATGGCACCATGTGTCTCTTGAGAATTTaGTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGAT | + |
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Preference number: 3 (lower is better) Translates to: EGPNGTMCLLRI*SHGQEGALSGD Trigger: ATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR GCA 72 bp | ATGTCATGTCTCTTGAGGGAAGCACCTCTAGAGGCCTaGATGCATGGAGTACCCAGAGTAGACGAAGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: MSCLLREAPLEA*MHGVPRVDEEG Trigger: TCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGACATGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CCA 72 bp | CACCAACCTCACCTTTGCGGAAGAGGAAGGGCCCAATaGCACCATGTGTCTCTTGAGAATTTGCTCTCATGG | + |
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Preference number: 3 (lower is better) Translates to: HQPHLCGRGRAQ*HHVSLENLLSW Trigger: CCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGCAAAGGTGAGGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 72 bp | CTGAAAGGGGTGCCTCTGGATCTTTCTGGAGGCGAATaGTTAGGGAGCAAGTGTGCAAGTGATGTACACCCA | + |
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Preference number: 3 (lower is better) Translates to: LKGVPLDLSGGE*LGSKCASDVHP Trigger: TGGGTGTACATCACTTGCACACTTGCTCCCTAACCATTCGCCTCCAGAAAGATCCAGAGGCACCCCTTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR TCA 72 bp | GCTTGTCTCCGAGGGACGTGCCTGCCAAACACTCTTTaGATCTCTCATCCATTTCCTGGTTCTGGGTTTCGT | + |
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Preference number: 3 (lower is better) Translates to: ACLRGTCLPNTL*ISHPFPGSGFR Trigger: ACGAAACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGAGACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR CCA 72 bp | TCTCTTGAGGGAAGCACCTCTAGAGGCCTGCATGCATaGAGTACCCAGAGTAGACGAAGAGGGATTTATCCT | + |
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Preference number: 3 (lower is better) Translates to: SLEGSTSRGLHA*STQSRRRGIYP Trigger: AGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR TCA 72 bp | GAAGCCCTAAGTGATCTAGAACTTTTAAAGCTCGGCTaGCTTCACACTTGTAGCAAGCCTCCTGCCTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: EALSDLELLKLG*LHTCSKPPASS Trigger: GGAAGAGGCAGGAGGCTTGCTACAAGTGTGAAGTCAGCCGAGCTTTAAAAGTTCTAGATCACTTAGGGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR GCA 72 bp | TGCTTCATACTTCAGCTTGTCTCCGAGGGACGTGCCTaGCAAACACTCTTTGAATCTCTCATCCATTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: CFILQLVSEGRA*QTLFESLIHFL Trigger: CAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGAGACAAGCTGAAGTATGAAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR GCA 72 bp | GTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATaGCTAGTCACTGTAGTGTTGGGGAAGAGACCATGG | + |
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Preference number: 3 (lower is better) Translates to: VFLCSPPRSIPQ*LVTVVLGKRPW Trigger: CCATGGTCTCTTCCCCAACACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CCA 72 bp | GCCAGCAGGTGTGTTCCTGTTGCTTTGCTTGATGGTTaGAGTCAAGGTCTGATTGAAGCCCTAAGTGATCTA | + |
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Preference number: 3 (lower is better) Translates to: ASRCVPVALLDG*SQGLIEALSDL Trigger: TAGATCACTTAGGGCTTCAATCAGACCTTGACTCCAACCATCAAGCAAAGCAACAGGAACACACCTGCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR GCA 72 bp | GTGTCTCTTGAGAATTTGCTCTCATGGCCAGGAAGGTaGTCTGAGTGGAGATGGTTTCTATTTGTTCGTCAG | + |
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Preference number: 3 (lower is better) Translates to: VSLENLLSWPGR*SEWRWFLFVRQ Trigger: CTGACGAACAAATAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR TCA 72 bp | TTCTGGAGGCGAATGGTTAGGGAGCAAGTGTGCAAGTaGTGTACACCCAATCTTATCAACTCCCAATATTCT | + |
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Preference number: 3 (lower is better) Translates to: FWRRMVREQVCK*CTPNLINSQYS Trigger: AGAATATTGGGAGTTGATAAGATTGGGTGTACATCACTTGCACACTTGCTCCCTAACCATTCGCCTCCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR GCA 72 bp | CAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACTTaGAGTTTGTCAACCTTAAATCAGTGCAGAGTCAGG | + |
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Preference number: 3 (lower is better) Translates to: QSRRRGIYPEAT*SLSTLNQCRVR Trigger: CCTGACTCTGCACTGATTTAAGGTTGACAAACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR CCA 72 bp | TTGCTCTCATGGCCAGGAAGGTGCTCTGAGTGGAGATaGTTTCTATTTGTTCGTCAGTTAAAGAGAAACCAA | + |
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Preference number: 3 (lower is better) Translates to: LLSWPGRCSEWR*FLFVRQLKRNQ Trigger: TTGGTTTCTCTTTAACTGACGAACAAATAGAAACCATCTCCACTCAGAGCACCTTCCTGGCCATGAGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR TCA 72 bp | TTGTCCCTTTATGAATTGCCTGAAGAATTCATCCCATaGGGCATAGCTGGGAATATCGGGGACATCATTATG | + |
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Preference number: 3 (lower is better) Translates to: LSLYELPEEFIP*GIAGNIGDIIM Trigger: CATAATGATGTCCCCGATATTCCCAGCTATGCCTCATGGGATGAATTCTTCAGGCAATTCATAAAGGGACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
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| 3UTR-3UTR CAA 90 bp | GTACACCCAATCTTATCAACTCCCAATATTCTCCACGAGTTGGTGAGTGTTTTGATGCAAATACAGCATTaGGAAGCCCATTTTGGTCTG | + |
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Preference number: 3 (lower is better) Translates to: VHPILSTPNILHELVSVLMQIQH*EAHFGL Trigger: CAGACCAAAATGGGCTTCCAAATGCTGTATTTGCAT...CAAAACACTCACCAACTCGTGGAGAATATTGGGAGTTGATAAGATTGGGTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTATGACCCTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCATAATGTCATGTCTCTaGAGGGAAGCACCTCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: AYDPATEKSVWYKNRQLSIMSCL*REAPLE Trigger: CTCTAGAGGTGCTTCCCTCAAGAGACATGACATTAT...GCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAGGGTCATAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR-3UTR CAA 90 bp | GGAGCAAGTGTGCAAGTGATGTACACCCAATCTTATCAACTCCCAATATTCTCCTGTTTTGTTTTGAGATaGGCATGTAGTATAGACTGG | + |
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Preference number: 3 (lower is better) Translates to: GASVQVMYTQSYQLPIFSCFVLR*ACSIDW Trigger: CCAGTCTATACTACATGCCAATCTCAAAACAAAACA...GGAGAATATTGGGAGTTGATAAGATTGGGTGTACATCACTTGCACACTTGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
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| 3UTR TCA 72 bp | CTAGAATGTTCTCTACATCCTCCTGTTAGTTTCACGTaGCTGCTTATGACCCTGCAACAGAAAAATCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LECSLHPPVSFT*LLMTLQQKNLY Trigger: ATACAGATTTTTCTGTTGCAGGGTCATAAGCAGTCACGTGAAACTAACAGGAGGATGTAGAGAACATTCTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAACCTACTGAGAAAAGCTaGAGAAAATGCAAATACAGC | + |
|
Preference number: 3 (lower is better) Translates to: LQQKNLYGTKTDSLALPQPTEKS*RKCKYS Trigger: GCTGTATTTGCATTTTCTCAAGCTTTTCTCAGTAGG...TTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | GCGGAAGAGGAAGGGCCCAATGGCACCATGTGTCTCTaGAGAATTTGCTCTCATGGCCAGGAAGGTGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AEEEGPNGTMCL*RICSHGQEGAL Trigger: CAGAGCACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTCCTCTTCCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
||
| CDS-3UTR CCA 90 bp | TGGGGAAGAGACCATGGGAAGCAGACACTACCAGCTGAGCAAGCCAGCAGGTGTAGTGCACATGGTGACTaGGTAAGGAATCCCCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: WGRDHGKQTLPAEQASRCSAHGD*VRNPLV Trigger: TACCAGGGGATTCCTTACCCAGTCACCATGTGCACT...ACACCTGCTGGCTTGCTCAGCTGGTAGTGTCTGCTTCCCATGGTCTCTTCCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | AGCTTGTCTCCGAGGGACGTGCCTGCCAAACACTCTTaGAATCTCTCATCCATTTCCTGGTTCTGGGTTTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPRDVPAKHS*NLSSISWFWVS Trigger: CGAAACCCAGAACCAGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGAGACAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
||
| CDS-3UTR TCA 90 bp | GAAGGGCCCAATGGCACCATGTGTCTCTTGAGAATTTGCTCTCATGGCCAGGAAATGGAGAATCCAGTTTaGACTTCGGGTAGGATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: EGPNGTMCLLRICSHGQEMENPV*TSGRML Trigger: TAGCATCCTACCCGAAGTTCAAACTGGATTCTCCAT...TTCCTGGCCATGAGAGCAAATTCTCAAGAGACACATGGTGCCATTGGGCCCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
||
| CDS-3UTR TCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTGCTCGGAAAGTTTCCTaGGTGCACATGGTGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSARKVS*VHMVTG Trigger: CCCAGTCACCATGTGCACTCAGGAAACTTTCCGAGC...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGCATGCATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCATGTCTCTTGAGAATTTaGTCTCATGGCCAGGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GLHAWSTQSRRRGIYPEACLLRI*SHGQEG Trigger: ACCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACA...TGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACTTGCAGTTTCTTGGCTTTGTTCTTaGAGATGGACTGAGGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HGVPRVDEEGFILKQLAVSWLCS*RWTEVA Trigger: AGCTACCTCAGTCCATCTTCAAGAACAAAGCCAAGA...AACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAACACCAACCTCACCTTTaGGGAAGAGGAAGGGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LQQKNLYGTKTDSLALPQHQPHL*GRGRAQ Trigger: TTGGGCCCTTCCTCTTCCGCAAAGGTGAGGTTGGTG...TTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTGGACGTCATCACTTCTaGCTTCAAAGGCATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSGRHHF*LQRHPK Trigger: CTTTGGATGCCTTTGAAGCCAGAAGTGATGACGTCC...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | ACGATGGTGTTAAGTAGAAGTATAATGTCATGTCTCTaGAGGGAAGCACCTCTAGAGGCCTGCATGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: TMVLSRSIMSCL*REAPLEACMHG Trigger: TCCATGCATGCAGGCCTCTAGAGGTGCTTCCCTCAAGAGACATGACATTATACTTCTACTTAACACCATCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | CATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACTTGCAGTTAAGAGTTTCATTCTCTaGTATTTCTCGGCGTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HGVPRVDEEGFILKQLAVKSFIL*YFSASP Trigger: TGGTGACGCCGAGAAATATCAGAGAATGAAACTCTT...AACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATGACCCTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCGCACCATGTGTCTCTTaGGAATTTGCTCTCATGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AYDPATEKSVWYKNRQLSAPCVS*EFALMA Trigger: GGCCATGAGAGCAAATTCTCAAGAGACACATGGTGC...GCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAGGGTCATAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | GGACACCGCTGTATCCTTAGGGTTTCGAAATATCACCAATATCTTGGCTTTGTTGGACGTCATCACTTCTaGCTTCAAAGGCATCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GHRCILRVSKYHQYLGFVGRHHF*LQRHPK Trigger: CTTTGGATGCCTTTGAAGCCAGAAGTGATGACGTCC...AACAAAGCCAAGATATTGGTGATATTTCGAAACCCTAAGGATACAGCGGTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATGACCCTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCCCCATGAGGCATAGCTaGGAATATCGGGGACATCAT | + |
|
Preference number: 4 (lower is better) Translates to: AYDPATEKSVWYKNRQLSPMRHS*EYRGHH Trigger: ATGATGTCCCCGATATTCCCAGCTATGCCTCATGGG...GCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAGGGTCATAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTCTCTCATCCATTTCCTaGTTCTGGGTTTCGTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSLSSIS*FWVSLN Trigger: GTTCAACGAAACCCAGAACCAGGAAATGGATGAGAG...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | CTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAATCCGAGGGACGTGCCTaGCAAACACTCTTTGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LQQKNLYGTKTDSLALPQSEGRA*QTLFES Trigger: AGATTCAAAGAGTGTTTGGCAGGCACGTCCCTCGGA...TTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | CCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTGTTGGGGAAGAGACCAAATTCACTGACAATATaGAGAATCCAGTTTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PPRSIPQCLVTVVLGKRPNSLTI*RIQFEP Trigger: TGGTTCAAACTGGATTCTCCATATTGTCAGTGAATT...TGGTCTCTTCCCCAACACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | TTGAATCTCTCATCCATTTCCTGGTTCTGGGTTTCGTaGAACAAACGTTTCCAATCACCAACCTCACCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNLSSISWFWVS*NKRFQSPTSPL Trigger: CAAAGGTGAGGTTGGTGATTGGAAACGTTTGTTCAACGAAACCCAGAACCAGGAAATGGATGAGAGATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159710.2 |
||
| 3UTR CAA 72 bp | AGACGAAGAGGGATTTATCCTGAAGCAACTTGCAGTTaGTCAACCTTAAATCAGTGCAGAGTCAGGCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRGIYPEATCS*STLNQCRVRLE Trigger: TTCAAGCCTGACTCTGCACTGATTTAAGGTTGACAAACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | GGTCTGTGTTTGACTCTAGAACAACACACTGACAGCAATGTTCCAATTCTTCAATGTCAGGATCCTTGGTaGTGGGAAGAGTTTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLCLTLEQHTDSNVPILQCQDPW*WEEFHS Trigger: AGAATGAAACTCTTCCCATCACCAAGGATCCTGACA...TTGAAGAATTGGAACATTGCTGTCAGTGTGTTGTTCTAGAGTCAAACACAGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | ACCATTCCTAGATCCACACTATTCATAATCATGTTACATGATTATTGTCACGCGGCCAGGAAGGTGCTCTaGGTGGAGATGGTTTCTATT | + |
|
Preference number: 4 (lower is better) Translates to: TIPRSTLFIIMLHDYCHAARKVL*VEMVSI Trigger: AATAGAAACCATCTCCACTCAGAGCACCTTCCTGGC...CGCGTGACAATAATCATGTAACATGATTATGAATAGTGTGGATCTAGGAATGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | TTTGCCTCAACGATGGTGTTAAGTAGAAGTATAATGTCATGTCTCTTGAGGGAAGAATCCCCTGGTAGGTaGGAAATAACTGGGAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FASTMVLSRSIMSCLLREESPGR*EITGKV Trigger: CACTTTCCCAGTTATTTCTCACCTACCAGGGGATTC...TTCCCTCAAGAGACATGACATTATACTTCTACTTAACACCATCGTTGAGGCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | CAAATACAGCATTTGGAAGCCCATTTTGGTCTGTGTTaGACTCTAGAACAACACACTGACAGCAATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QIQHLEAHFGLC*TLEQHTDSNVP Trigger: TGGAACATTGCTGTCAGTGTGTTGTTCTAGAGTCAAACACAGACCAAAATGGGCTTCCAAATGCTGTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR TCA 90 bp | GCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAACGCTGCCAAACACTCTTTaGATCTCTCATCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ATEKSVWYKNRQLSFASTLPNTL*ISHPFP Trigger: AGGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAG...CGTTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTTGTCCCTTTATGAATTaGCTGAAGAATTCATCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSCPFMN*LKNSSH Trigger: ATGGGATGAATTCTTCAGGCAATTCATAAAGGGACA...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | TCACGCGACTGTTTGACTGCACTACTATCTAATTTTATAAATCCAGTTATTCTGTCATGGCCAGGAAGGTaGTCTGAGTGGAGATGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SRDCLTALLSNFINPVILSWPGR*SEWRWF Trigger: AAACCATCTCCACTCAGAGCACCTTCCTGGCCATGA...CAGAATAACTGGATTTATAAAATTAGATAGTAGTGCAGTCAAACAGTCGCGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | GAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAACGATGGTGGGAAGGTGCTCTGAGTaGAGATGGTTTCTATTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKSVWYKNRQLSFASTMVGRCSE*RWFLFV Trigger: AACAAATAGAAACCATCTCCACTCAGAGCACCTTCC...CACCATCGTTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CCA 90 bp | TCTAATTTTATAAATCCAGTTATTCTGAGGGAACAGAAGCTCTGTAAGCCAGCCTCCATTTCCTGGTTCTaGGTTTCGTTGAACAAACGT | + |
|
Preference number: 4 (lower is better) Translates to: SNFINPVILREQKLCKPASISWF*VSLNKR Trigger: ACGTTTGTTCAACGAAACCCAGAACCAGGAAATGGA...GGCTGGCTTACAGAGCTTCTGTTCCCTCAGAATAACTGGATTTATAAAATTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| 3UTR CAA 72 bp | TCCCAATATTCTCCACGAGTTGGTGAGTGTTTTGTTTaGAGATTGGCATGTAGTATAGACTGGCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: SQYSPRVGECFV*RLACSIDWLQI Trigger: AATTTGAAGCCAGTCTATACTACATGCCAATCTCAAAACAAAACACTCACCAACTCGTGGAGAATATTGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR GCA 90 bp | TCACGCGACTGTTTGACTGCACTACTATCTAATTTTATAAATCCAGTTATTCTGTTAAGCCAGGCAATATaGTTCATACTTCAGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SRDCLTALLSNFINPVILLSQAI*FILQLV Trigger: GACAAGCTGAAGTATGAAGCATATTGCCTGGCTTAA...CAGAATAACTGGATTTATAAAATTAGATAGTAGTGCAGTCAAACAGTCGCGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGAAGAGACCATGGGAAGCAGACACTACCAGCTGAGCAAGCCAGCAGGTGTTATGGAGAATCCAGTTaGAACCACACTTCGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WGRDHGKQTLPAEQASRCYGESS*NHTSGR Trigger: CCTACCCGAAGTGTGGTTCAAACTGGATTCTCCATA...ACACCTGCTGGCTTGCTCAGCTGGTAGTGTCTGCTTCCCATGGTCTCTTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCATGCATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAGGGTTGTCAGGATCCTaGGTGATGGGAAGAGTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GLHAWSTQSRRRGIYPEAGLSGS*VMGRVS Trigger: TGAAACTCTTCCCATCACCAAGGATCCTGACAACCC...TGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | GGCCTGCATGCATGGAGTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAGTGTCTCTTGAGAATTaGCTCTCATGGCCAGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLHAWSTQSRRRGIYPEAVSLEN*LSWPGR Trigger: CCTTCCTGGCCATGAGAGCAAATTCTCAAGAGACAC...TGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTACTCCATGCATGCAGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | CCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTGTTGGGGAAGAGACCAGGCACCATGTGTCTCTaGAGAATTTGCTCTCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRSIPQCLVTVVLGKRPGTMCL*RICSHG Trigger: GCCATGAGAGCAAATTCTCAAGAGACACATGGTGCC...TGGTCTCTTCCCCAACACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | CTGCAACAGAAAAATCTGTATGGTACAAAAACAGACAGCTTAGCTTTGCCTCAAGCTTCATACTTCAGCTaGTCTCCGAGGGACGTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: LQQKNLYGTKTDSLALPQASYFS*SPRDVP Trigger: AGGCACGTCCCTCGGAGACAAGCTGAAGTATGAAGC...TTGAGGCAAAGCTAAGCTGTCTGTTTTTGTACCATACAGATTTTTCTGTTGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | GTACCCAGAGTAGACGAAGAGGGATTTATCCTGAAGCAACTTGCAGTTTGTCAACCTGCCAAACACTCTTaGAATCTCTCATCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPRVDEEGFILKQLAVCQPAKHS*NLSSIS Trigger: GGAAATGGATGAGAGATTCAAAGAGTGTTTGGCAGG...TTGACAAACTGCAAGTTGCTTCAGGATAAATCCCTCTTCGTCTACTCTGGGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTTCCTGTGTTCACCTCCAAGATCCATACCACAATGCCTAGTCACTGTAGTACTTCCCCAAGAAACTaGTCCCTTTATGAATTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPVFTSKIHTTMPSHCSTSPRN*SLYELP Trigger: AGGCAATTCATAAAGGGACAAGTTTCTTGGGGAAGT...ACTACAGTGACTAGGCATTGTGGTATGGATCTTGGAGGTGAACACAGGAAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCCTCAACGATGGTGTTAAGTAGAAGTATAATGTCATGTCTCTTGAGGGAATTGTCCCTTTATGAATaGCCTGAAGAATTCATCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FASTMVLSRSIMSCLLRELSLYE*PEEFIP Trigger: TGGGATGAATTCTTCAGGCAATTCATAAAGGGACAA...TTCCCTCAAGAGACATGACATTATACTTCTACTTAACACCATCGTTGAGGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169544.8 |
||
| CDS CCA 72 bp | ACTTCGGGTAGGATGCTAGCAGGACGTCATCACTTCTaGCTTCAAAGGCATCCAAAGCTCGGAAAGTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: TSGRMLAGRHHF*LQRHPKLGKFP Trigger: AGGAAACTTTCCGAGCTTTGGATGCCTTTGAAGCCAGAAGTGATGACGTCCTGCTAGCATCCTACCCGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000042683.7 ENSMUST00000159710.2 ENSMUST00000169544.8 |
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