Pregenerated sensors for SULT4A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018865Ensembl transcript IDs: ENSMUST00000082365.6, ENSMUST00000229826.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTATCTGCACGGAGGACGGTCAACCTGCAGACTGGGTCTCCTGGGTaGGAGCCTCGCTTGGCACAGGTGGAGCAGATGGGACAGCGACTA | + |
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Preference number: 1 (lower is better) Translates to: LSARRTVNLQTGSPG*EPRLAQVEQMGQRL Trigger: TAGTCGCTGTCCCATCTGCTCCACCTGTGCCAAGCGAGGCTCTCACCCAGGAGACCCAGTCTGCAGGTTGACCGTCCTCCGTGCAGATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 90 bp | GGGCAGACATTTGCACTGCCCGTGCGTGTGGTATTGGCCACCATGTaGAGACTCAAAACACTATGGGCCAGGCCAGGCGGCTGCTGTAGA | + |
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Preference number: 1 (lower is better) Translates to: GQTFALPVRVVLATM*RLKTLWARPGGCCR Trigger: TCTACAGCAGCCGCCTGGCCTGGCCCATAGTGTTTTGAGTCTCCACATGGTGGCCAATACCACACGCACGGGCAGTGCAAATGTCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| 3UTR TCA 90 bp | CTTCCACAGCCTCAGCCTCCCACTACCACGTTCTTCCCAGCCTGGTaGGTAACAGAACAAGTCGGTCCCCACAAGCAGCGATCTCCTGGT | + |
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Preference number: 1 (lower is better) Translates to: LPQPQPPTTTFFPAW*VTEQVGPHKQRSPG Trigger: ACCAGGAGATCGCTGCTTGTGGGGACCGACTTGTTCTGTTACTCACCAGGCTGGGAAGAACGTGGTAGTGGGAGGCTGAGGCTGTGGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 90 bp | GACACACAGGAAAGGCGCTGCCGCCATGCCCACCCCAGAGAACCATaGACCAGACCTACACAAGCTTCTCTCTGGACAGAGGTAATGCCA | + |
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Preference number: 1 (lower is better) Translates to: DTQERRCRHAHPREP*TRPTQASLWTEVMP Trigger: TGGCATTACCTCTGTCCAGAGAGAAGCTTGTGTAGGTCTGGTGCATGGTTCTCTGGGGTGGGCATGGCGGCAGCGCCTTTCCTGTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR TCA 90 bp | CAGCTTCCCTGCCGAAACATTCCTTGGGCTCTTCTGTGCTGGGGCTaGGAGAGATGCGCGCTTAGAGGTGTTTCTGAAAACGGCCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: QLPCRNIPWALLCWG*ERCALRGVSENGLG Trigger: TCCCAGGCCGTTTTCAGAAACACCTCTAAGCGCGCATCTCTCTCAGCCCCAGCACAGAAGAGCCCAAGGAATGTTTCGGCAGGGAAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 90 bp | CGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTaGTGCAGTCTGGCATCTGTGGGGCCTCTTCCACACCTACCAGTG | + |
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Preference number: 1 (lower is better) Translates to: RCLGEHVKAVKDTNS*CSLASVGPLPHLPV Trigger: CACTGGTAGGTGTGGAAGAGGCCCCACAGATGCCAGACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 90 bp | TGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTaGAGTCTGGCATCTGTGGGGCCTCTTCCACACCTACCAGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: CLGEHVKAVKDTNSW*SLASVGPLPHLPVP Trigger: AGGCACTGGTAGGTGTGGAAGAGGCCCCACAGATGCCAGACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 90 bp | GCACAGGTGGAGCAGATGGGACAGCGACTAGGGACTTTAGAACCATaGTATGTCCTGTATCTCTTGCCAGCAGGAGTGTGTCAGTCGCTG | + |
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Preference number: 1 (lower is better) Translates to: AQVEQMGQRLGTLEP*YVLYLLPAGVCQSL Trigger: CAGCGACTGACACACTCCTGCTGGCAAGAGATACAGGACATAGCATGGTTCTAAAGTCCCTAGTCGCTGTCCCATCTGCTCCACCTGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 90 bp | GCGCTTAGAGGTGTTTCTGAAAACGGCCTGGGACAGGTCCTGGCTTaGTATCAGGATGGTTCCAAAAGACTGAACTCCACAGGCGACACC | + |
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Preference number: 1 (lower is better) Translates to: ALRGVSENGLGQVLA*YQDGSKRLNSTGDT Trigger: GGTGTCGCCTGTGGAGTTCAGTCTTTTGGAACCATCCTGATACCAAGCCAGGACCTGTCCCAGGCCGTTTTCAGAAACACCTCTAAGCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 90 bp | CATGCTATGTCCTGTATCTCTTGCCAGCAGGAGTGTGTCAGTCGCTaGCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: HAMSCISCQQECVSR*LGEHVKAVKDTNSW Trigger: CCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCGACTGACACACTCCTGCTGGCAAGAGATACAGGACATAGCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR TCA 90 bp | GCATGCAAGTTCTCGGATTCTGGTATTATAGATAAAAGTCAAACGTaGGGTCACACTTCCCCATCTTCTGTTTGTACACTAGATCAAACT | + |
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Preference number: 1 (lower is better) Translates to: ACKFSDSGIIDKSQT*GHTSPSSVCTLDQT Trigger: AGTTTGATCTAGTGTACAAACAGAAGATGGGGAAGTGTGACCTCACGTTTGACTTTTATCTATAATACCAGAATCCGAGAACTTGCATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCCAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCAGCCAGGCCAGGCGGCTaGTGTAGACAGCATCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: RPGGCCRQHPLTPPRLSPARPGG*CRQHPL Trigger: GAGAGGATGCTGTCTACAGCAGCCGCCTGGCCTGGC...TGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGGCCT 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGCGTTCATGGAGACGGTaGAGATGTCCTTCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: QAAAVDSILSLLLGSLHQRSWRR*RCPSTA Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAACG...CTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCAAATTCAAGCCCATAGGTGTGGGGGTGGGCAGCACACAGGATCATGGCGCCAGGCCAGGCGGCTaGTGTAGACAGCATCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LVKFKPIGVGVGSTQDHGARPGG*CRQHPL Trigger: GAGAGGATGCTGTCTACAGCAGCCGCCTGGCCTGGC...GCCATGATCCTGTGTGCTGCCCACCCCCACACCTATGGGCTTGAATTTGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTGATAAAAGTCAAACGTaGGGTCACACTTCCCCATCT | + |
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Preference number: 2 (lower is better) Translates to: QHPLTPPRLSPPGSPPAVDKSQT*GHTSPS Trigger: AGATGGGGAAGTGTGACCTCACGTTTGACTTTTATC...AACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| 3UTR-3UTR CCA 90 bp | GCCACCCGCAGCCTCGGGCCAGCTTCCCTGCCGAAACATTCCTTGGGCTCTTCTGTATTGGCCACCATGTaGAGACTCAAAACACTATGG | + |
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Preference number: 2 (lower is better) Translates to: ATRSLGPASLPKHSLGSSVLATM*RLKTLW Trigger: CCATAGTGTTTTGAGTCTCCACATGGTGGCCAATAC...AGAAGAGCCCAAGGAATGTTTCGGCAGGGAAGCTGGCCCGAGGCTGCGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR CCA 90 bp | GCCTCCCACTACCACGTTCTTCCCAGCCTGGTGAGTAACAGAACAAGTCGGTCCTGCCGAAACATTCCTTaGGCTCTTCTGTGCTGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ASHYHVLPSLVSNRTSRSCRNIP*ALLCWG Trigger: GCCCCAGCACAGAAGAGCCCAAGGAATGTTTCGGCA...GGACCGACTTGTTCTGTTACTCACCAGGCTGGGAAGAACGTGGTAGTGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCACAGCCCAACTCTTCCTaGTGCAGGATTTGGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: PGGCCRQHPLTPPRLSPPQPNSS*CRIWNQ Trigger: TTGATTCCAAATCCTGCACCAGGAAGAGTTGGGCTG...TGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| 3UTR-3UTR TCA 90 bp | GCCACCCGCAGCCTCGGGCCAGCTTCCCTGCCGAAACATTCCTTGGGCTCTTCTGCACTTGTATTTGGCTaGCAGATATTTATTTCCGCT | + |
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Preference number: 2 (lower is better) Translates to: ATRSLGPASLPKHSLGSSALVFG*QIFISA Trigger: AGCGGAAATAAATATCTGTCAGCCAAATACAAGTGC...AGAAGAGCCCAAGGAATGTTTCGGCAGGGAAGCTGGCCCGAGGCTGCGGGTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR GCA 90 bp | AGTCGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTGCTGTGGGGCAGACATTTaGACTGCCCGTGCGTGTGGT | + |
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Preference number: 2 (lower is better) Translates to: SRCLGEHVKAVKDTNSWCCGADI*TARACG Trigger: ACCACACGCACGGGCAGTGCAAATGTCTGCCCCACA...GCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR CCA 90 bp | CGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTGCAGTAGACTCAAAACACTATaGGCCAGGCCAGGCGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: RCLGEHVKAVKDTNSWCSRLKTL*ARPGGC Trigger: GCAGCCGCCTGGCCTGGCCCATAGTGTTTTGAGTCT...ACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR TCA 90 bp | CAGCGACTAGGGACTTTAGAACCATGCTATGTCCTGTATCTCTTGCCAGCAGGACTTCTGTGCTGGGGCTaGGAGAGATGCGCGCTTAGA | + |
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Preference number: 2 (lower is better) Translates to: QRLGTLEPCYVLYLLPAGLLCWG*ERCALR Trigger: TCTAAGCGCGCATCTCTCTCAGCCCCAGCACAGAAG...TCCTGCTGGCAAGAGATACAGGACATAGCATGGTTCTAAAGTCCCTAGTCGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGTCAAATTCAAGCCCATAGGTGTGGGGGTGGGCAGCACACAGGATCATGGCATGTCCTGTATCTCTTaGCAGCAGGAGTGTGTCAGT | + |
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Preference number: 2 (lower is better) Translates to: LVKFKPIGVGVGSTQDHGMSCIS*QQECVS Trigger: ACTGACACACTCCTGCTGGCAAGAGATACAGGACAT...GCCATGATCCTGTGTGCTGCCCACCCCCACACCTATGGGCTTGAATTTGACCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR GCA 90 bp | GCCTCCCACTACCACGTTCTTCCCAGCCTGGTGAGTAACAGAACAAGTCGGTCCGGGACTTTAGAACCATaGTATGTCCTGTATCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: ASHYHVLPSLVSNRTSRSGTLEP*YVLYLL Trigger: CAAGAGATACAGGACATAGCATGGTTCTAAAGTCCC...GGACCGACTTGTTCTGTTACTCACCAGGCTGGGAAGAACGTGGTAGTGGGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR GCA 90 bp | CCCATCTTCTGTTTGTACACTAGATCAAACTTCTCGTTCATGGAGACGGTGAAGCCCAACTCTTCCTGGTaGAGGATTTGGAATCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: PIFCLYTRSNFSFMETVKPNSSW*RIWNQD Trigger: GTCTTGATTCCAAATCCTGCACCAGGAAGAGTTGGG...CTTCACCGTCTCCATGAACGAGAAGTTTGATCTAGTGTACAAACAGAAGATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| 3UTR TCA 72 bp | CGGAGGACGGTCAACCTGCAGACTGGGTCTCCTGGGTaGGAGCCTCGCTTGGCACAGGTGGAGCAGATGGGA | + |
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Preference number: 3 (lower is better) Translates to: RRTVNLQTGSPG*EPRLAQVEQMG Trigger: TCCCATCTGCTCCACCTGTGCCAAGCGAGGCTCTCACCCAGGAGACCCAGTCTGCAGGTTGACCGTCCTCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | GTCTGGCATCTGTGGGGCCTCTTCCACACCTACCAGTaGCTTCAGATGCCACCCGCAGCCTCGGGCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: VWHLWGLFHTYQ*LQMPPAASGQL Trigger: AAGCTGGCCCGAGGCTGCGGGTGGCATCTGAAGGCACTGGTAGGTGTGGAAGAGGCCCCACAGATGCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | TTCCTCCCCAGACACACAGGAAAGGCGCTGCCGCCATaGCCACCCCAGAGAACCATGCACCAGACCTACACA | + |
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Preference number: 3 (lower is better) Translates to: FLPRHTGKALPP*PPQRTMHQTYT Trigger: TGTGTAGGTCTGGTGCATGGTTCTCTGGGGTGGGCATGGCGGCAGCGCCTTTCCTGTGTGTCTGGGGAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | TGGAGACTCAAAACACTATGGGCCAGGCCAGGCGGCTaGTGTAGACAGCATCCTCTCACTCCTCCTCGGCTC | + |
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Preference number: 3 (lower is better) Translates to: WRLKTLWARPGG*CRQHPLTPPRL Trigger: GAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGGCCTGGCCCATAGTGTTTTGAGTCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| 3UTR GCA 72 bp | GAAAGGCGCTGCCGCCATGCCCACCCCAGAGAACCATaGACCAGACCTACACAAGCTTCTCTCTGGACAGAG | + |
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Preference number: 3 (lower is better) Translates to: ERRCRHAHPREP*TRPTQASLWTE Trigger: CTCTGTCCAGAGAGAAGCTTGTGTAGGTCTGGTGCATGGTTCTCTGGGGTGGGCATGGCGGCAGCGCCTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR TCA 72 bp | CCTCAGCCTCCCACTACCACGTTCTTCCCAGCCTGGTaGGTAACAGAACAAGTCGGTCCCCACAAGCAGCGA | + |
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Preference number: 3 (lower is better) Translates to: PQPPTTTFFPAW*VTEQVGPHKQR Trigger: TCGCTGCTTGTGGGGACCGACTTGTTCTGTTACTCACCAGGCTGGGAAGAACGTGGTAGTGGGAGGCTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR CAA 90 bp | GAAAGGCGCTGCCGCCATGCCCACCCCAGAGAACCATGCACCAGACCTACACAACCCCTGGAAATGCACTaGTATTTGGCTGACAGATAT | + |
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Preference number: 3 (lower is better) Translates to: ERRCRHAHPREPCTRPTQPLEMH*YLADRY Trigger: ATATCTGTCAGCCAAATACAAGTGCATTTCCAGGGG...TTGTGTAGGTCTGGTGCATGGTTCTCTGGGGTGGGCATGGCGGCAGCGCCTTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | TCCTGTATCTCTTGCCAGCAGGAGTGTGTCAGTCGCTaGCTTGGGGAGCACGTGAAGGCTGTGAAAGATACT | + |
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Preference number: 3 (lower is better) Translates to: SCISCQQECVSR*LGEHVKAVKDT Trigger: AGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCGACTGACACACTCCTGCTGGCAAGAGATACAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 72 bp | AGAGATGCGCGCTTAGAGGTGTTTCTGAAAACGGCCTaGGACAGGTCCTGGCTTGGTATCAGGATGGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: RDARLEVFLKTA*DRSWLGIRMVP Trigger: TGGAACCATCCTGATACCAAGCCAGGACCTGTCCCAGGCCGTTTTCAGAAACACCTCTAAGCGCGCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 72 bp | GGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTaGTGCAGTCTGGCATCTGTGGGGCCTCTTCCACAC | + |
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Preference number: 3 (lower is better) Translates to: GEHVKAVKDTNS*CSLASVGPLPH Trigger: GTGTGGAAGAGGCCCCACAGATGCCAGACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR-3UTR CAA 90 bp | AAAGATGCAGGCAAGCAGAGATTACCATGTGTGGTTCCAGAACATCCGTACAGTCTGCCGAAACATTCCTaGGGCTCTTCTGTGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: KDAGKQRLPCVVPEHPYSLPKHS*GSSVLG Trigger: CCCCAGCACAGAAGAGCCCAAGGAATGTTTCGGCAG...ACTGTACGGATGTTCTGGAACCACACATGGTAATCTCTGCTTGCCTGCATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | GAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTaGAGTCTGGCATCTGTGGGGCCTCTTCCACACCTA | + |
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Preference number: 3 (lower is better) Translates to: EHVKAVKDTNSW*SLASVGPLPHL Trigger: TAGGTGTGGAAGAGGCCCCACAGATGCCAGACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR GCA 72 bp | GAGCAGATGGGACAGCGACTAGGGACTTTAGAACCATaGTATGTCCTGTATCTCTTGCCAGCAGGAGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: EQMGQRLGTLEP*YVLYLLPAGVC Trigger: ACACACTCCTGCTGGCAAGAGATACAGGACATAGCATGGTTCTAAAGTCCCTAGTCGCTGTCCCATCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR CCA 72 bp | GGTGTTTCTGAAAACGGCCTGGGACAGGTCCTGGCTTaGTATCAGGATGGTTCCAAAAGACTGAACTCCACA | + |
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Preference number: 3 (lower is better) Translates to: GVSENGLGQVLA*YQDGSKRLNST Trigger: TGTGGAGTTCAGTCTTTTGGAACCATCCTGATACCAAGCCAGGACCTGTCCCAGGCCGTTTTCAGAAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| 3UTR TCA 72 bp | TTCTCGGATTCTGGTATTATAGATAAAAGTCAAACGTaGGGTCACACTTCCCCATCTTCTGTTTGTACACTA | + |
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Preference number: 3 (lower is better) Translates to: FSDSGIIDKSQT*GHTSPSSVCTL Trigger: TAGTGTACAAACAGAAGATGGGGAAGTGTGACCTCACGTTTGACTTTTATCTATAATACCAGAATCCGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| CDS-3UTR GCA 90 bp | GCCAGGCCAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTGGCTCCCCGAGCCCCTaGATCCTCGCCACCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: ARPGGCCRQHPLTPPRLSGSPSP*ILATSR Trigger: CCTTGAGGTGGCGAGGATGCAGGGGCTCGGGGAGCC...AGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGGCCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
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| CDS-3UTR CCA 90 bp | CTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGCGATCCACACGTCGCTaGGCCGCACGGGGAAGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LTPPRLSPPGSPPAVSKQRSTRR*AARGSR Trigger: CCGACTTCCCCGTGCGGCCCAGCGACGTGTGGATCG...CTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| 3UTR CAA 72 bp | CGCAGCCTCGGGCCAGCTTCCCTGCCGAAACATTCCTaGGGCTCTTCTGTGCTGGGGCTGAGAGAGATGCGC | + |
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Preference number: 4 (lower is better) Translates to: RSLGPASLPKHS*GSSVLGLREMR Trigger: GCGCATCTCTCTCAGCCCCAGCACAGAAGAGCCCAAGGAATGTTTCGGCAGGGAAGCTGGCCCGAGGCTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
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| CDS-3UTR TCA 90 bp | CAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTCTGACTTGGGGTAGGTaGCGATCCACACGTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QHPLTPPRLSPPGSPPAVLTWGR*RSTRRW Trigger: CCAGCGACGTGTGGATCGTCACCTACCCCAAGTCAG...AACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| CDS-3UTR CCA 90 bp | GGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGTGCCTCGGTAGCTCATaGTCCGCAGCGAGCGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: GCCRQHPLTPPRLSPPGSCLGSS*SAASGG Trigger: TCCACCGCTCGCTGCGGACCATGAGCTACCGAGGCA...CGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCC 63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| CDS-3UTR TCA 90 bp | TCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGCTTCCGGAAGTCTGACTTGGGGTAGGTaGCGATCCACACGTCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SALSTRLAPCCFQAASGSLTWGR*RSTRRW Trigger: CCAGCGACGTGTGGATCGTCACCTACCCCAAGTCAG...ACTTCCGGAAGCTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| CDS-3UTR GCA 90 bp | CTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGGGAACTCGAAGTACTTaGTCTCGAACTCGCCCGGGG | + |
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Preference number: 4 (lower is better) Translates to: LTPPRLSPPGSPPAVSKQGTRST*SRTRPG Trigger: CCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCC...CTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
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| CDS-3UTR CCA 90 bp | CTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPPRLSPPGSPPAVSKQGSRTP*NSKYLL Trigger: GAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCC...CTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | CAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QHPLTPPRLSPPGSPPAVGSRTP*NSKYLL Trigger: GAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCC...AACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | CTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGACACACCCAGGAATCTaGCCAGCTGCTCCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTPPRLSPPGSPPAVSKQTHPGI*PAAPPW Trigger: CCATGGTGGAGCAGCTGGCCAGATTCCTGGGTGTGT...CTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR GCA 90 bp | CAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTAGAACTCCTGGAAGGTaGCTCGGTAGCTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHPLTPPRLSPPGSPPAVRTPGR*LGSSWS Trigger: GGACCATGAGCTACCGAGGCACCTTCCAGGAGTTCT...AACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR GCA 90 bp | CACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGCTAGAACTCCTGGAAGGTaGCTCGGTAGCTCATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HSSSALSTRLAPCCFQAARTPGR*LGSSWS Trigger: GGACCATGAGCTACCGAGGCACCTTCCAGGAGTTCT...AGCTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR GCA 90 bp | TCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTCCAAGCAGCTTCCGGAAGTAGGAATCTGGCCAGCTaGTCCACCATGGTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SALSTRLAPCCFQAASGSRNLAS*STMVTR Trigger: CCTGGTGACCATGGTGGAGCAGCTGGCCAGATTCCT...ACTTCCGGAAGCTGCTTGGAAACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | ACAGGAAAGGCGCTGCCGCCATGCCCACCCCAGAGAACCATGCACCAGACCTACACACACCCAGGAATCTaGCCAGCTGCTCCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TGKALPPCPPQRTMHQTYTHPGI*PAAPPW Trigger: CCATGGTGGAGCAGCTGGCCAGATTCCTGGGTGTGT...GTAGGTCTGGTGCATGGTTCTCTGGGGTGGGCATGGCGGCAGCGCCTTTCCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR TCA 90 bp | CAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGTGCGAGCCATGTAGATaGCCTTGGAGTCCCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAAAVDSILSLLLGSLHQCEPCR*PWSPHC Trigger: ACAATGGGGACTCCAAGGTCATCTACATGGCTCGCA...CTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | GTAGAGCGTCCGGGGACCGTGAGCATGCAAGTTCTCGGATTCTGGTATTATAGACGATCCACACGTCGCTaGGCCGCACGGGGAAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: VERPGTVSMQVLGFWYYRRSTRR*AARGSR Trigger: CCGACTTCCCCGTGCGGCCCAGCGACGTGTGGATCG...TCTATAATACCAGAATCCGAGAACTTGCATGCTCACGGTCCCCGGACGCTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCCCACTACCACGTTCTTCCCAGCCTGGTGAGTAACAGAACAAGTCGGTCCAAGCGGTACGGGAGGTaGCTCTTGATGAGGCGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ASHYHVLPSLVSNRTSRSKRYGR*LLMRRG Trigger: TCCCCGCCTCATCAAGAGCCACCTCCCGTACCGCTT...GGACCGACTTGTTCTGTTACTCACCAGGCTGGGAAGAACGTGGTAGTGGGAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCCAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTATACCACCAAGTCCTTaGGGTTGCGAGCCATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARPGGCCRQHPLTPPRLSIPPSP*GCEPCR Trigger: TCTACATGGCTCGCAACCCCAAGGACTTGGTGGTAT...AGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR TCA 90 bp | CAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGCTGTTTGTTCCCAGAATTCCTaGACATGCTCAAACCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHPLTPPRLSPPGSPPAVCSQNS*TCSNQE Trigger: CTCCTGGTTTGAGCATGTTCAGGAATTCTGGGAACA...AACAGCAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CCA 90 bp | AGTCGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTGCTGCCTCGGTAGCTCATaGTCCGCAGCGAGCGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SRCLGEHVKAVKDTNSWCCLGSS*SAASGG Trigger: TCCACCGCTCGCTGCGGACCATGAGCTACCGAGGCA...GCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR GCA 90 bp | CCAGCGAGGAATAAAAGAACGCAAACAGGACTTTTAGCTAGTAGAGCGTCCGGGGGAACTCGAAGTACTTaGTCTCGAACTCGCCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PARNKRTQTGLLASRASGGTRST*SRTRPG Trigger: CCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCC...CCCGGACGCTCTACTAGCTAAAAGTCCTGTTTGCGTTCTTTTATTCCTCGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| 3UTR CAA 72 bp | CTAGGGACTTTAGAACCATGCTATGTCCTGTATCTCTaGCCAGCAGGAGTGTGTCAGTCGCTGCCTTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGTLEPCYVLYL*PAGVCQSLPWG Trigger: TCCCCAAGGCAGCGACTGACACACTCCTGCTGGCAAGAGATACAGGACATAGCATGGTTCTAAAGTCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR TCA 90 bp | CGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTGCAGTTGCGAGCCATGTAGATaGCCTTGGAGTCCCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCLGEHVKAVKDTNSWCSCEPCR*PWSPHC Trigger: ACAATGGGGACTCCAAGGTCATCTACATGGCTCGCA...ACTGCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR TCA 90 bp | AAAGATGCAGGCAAGCAGAGATTACCATGTGTGGTTCCAGAACATCCGTACAGTCGTTCATGGAGACGGTaGAGATGTCCTTCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDAGKQRLPCVVPEHPYSRSWRR*RCPSTA Trigger: GGCTGTGGAAGGACATCTTCACCGTCTCCATGAACG...ACTGTACGGATGTTCTGGAACCACACATGGTAATCTCTGCTTGCCTGCATCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR CCA 90 bp | CCAGCGAGGAATAAAAGAACGCAAACAGGACTTTTAGCTAGTAGAGCGTCCGGGATACCACCAAGTCCTTaGGGTTGCGAGCCATGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PARNKRTQTGLLASRASGIPPSP*GCEPCR Trigger: TCTACATGGCTCGCAACCCCAAGGACTTGGTGGTAT...CCCGGACGCTCTACTAGCTAAAAGTCCTGTTTGCGTTCTTTTATTCCTCGCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR TCA 90 bp | AGTCGCTGCCTTGGGGAGCACGTGAAGGCTGTGAAAGATACTAATTCTTGGTGCGATAAAAGTCAAACGTaGGGTCACACTTCCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRCLGEHVKAVKDTNSWCDKSQT*GHTSPS Trigger: AGATGGGGAAGTGTGACCTCACGTTTGACTTTTATC...GCACCAAGAATTAGTATCTTTCACAGCCTTCACGTGCTCCCCAAGGCAGCGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| 3UTR CAA 72 bp | AAGTCAAACGTGAGGTCACACTTCCCCATCTTCTGTTaGTACACTAGATCAAACTTCTCGTTCATGGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: KSNVRSHFPIFC*YTRSNFSFMET Trigger: CGTCTCCATGAACGAGAAGTTTGATCTAGTGTACAAACAGAAGATGGGGAAGTGTGACCTCACGTTTGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
||
| CDS GCA 90 bp | CGCGGCAGAAGGGCGGCAGCCGCACGCCATGGAACTCGAAGTACTTaGTCTCGAACTCGCCCGGGGTGCCCGGGGTCTCCGCTTCGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RGRRAAAARHGTRST*SRTRPGCPGSPLRS Trigger: AGAGCGAAGCGGAGACCCCGGGCACCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS TCA 90 bp | CGGCTCCCCGAGCCCCTGCATCCTCGCCACCTCAAGGCGATCTTCTaGGTAAAGAGGCAATGTGCCCGACCCACAGGCAGGGCCTCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLPEPLHPRHLKAIF*VKRQCARPTGRASA Trigger: TGCCGAGGCCCTGCCTGTGGGTCGGGCACATTGCCTCTTTACTCAGAAGATCGCCTTGAGGTGGCGAGGATGCAGGGGCTCGGGGAGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
||
| CDS CCA 90 bp | ATATCCTCCATCTTCCCGCGGCAGAAGGGCGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTCTCGAACTCGCCCGGGGTGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ISSIFPRQKGGSRTP*NSKYLLSNSPGVPG Trigger: CCCGGGCACCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCGGGAAGATGGAGGATAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCCCCCTGTGGAACTCGAAGTACTaGCTCTCGAACTCGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDSILSLLLGSLHQARPLWNSKY*LSNSPG Trigger: CCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCA...CAGGGGGCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CAA 90 bp | GCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCAGGCTCGCACCTTGGAGTCCCCATaGTGGAGGTCAGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVDSILSLLLGSLHQARTLESP*WRSEGR Trigger: CCTGCCCTCTGACCTCCACAATGGGGACTCCAAGGT...GCGAGCCTGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 90 bp | TCCACAGCCCAACTCTTCCCCGACCCACAGGCAGGGCCTCGGCATTaGAGCACTGATCCACCAGCTGGTGACAGTGCTCGATCAAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: STAQLFPDPQAGPRH*STDPPAGDSARSRT Trigger: AGTCCTTGATCGAGCACTGTCACCAGCTGGTGGATCAGTGCTGCAATGCCGAGGCCCTGCCTGTGGGTCGGGGAAGAGTTGGGCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS CCA 90 bp | GAGGCGGGGAGATGTCAGTTCCTTGATGATGTCCAGCCCCGGCTGTaGGTACTCCAGCACCGGCAGCTGCTCGTCAATGTTCATCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EAGRCQFLDDVQPRL*VLQHRQLLVNVHQA Trigger: GGCCTGATGAACATTGACGAGCAGCTGCCGGTGCTGGAGTACCCACAGCCGGGGCTGGACATCATCAAGGAACTGACATCTCCCCGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 90 bp | TTGATGATGTCCAGCCCCGGCTGTGGGTACTCCAGCACCGGCAGCTaGTCGTCAATGTTCATCAGGCCGATTTCATCAGGGTCGGCACCC | + |
|
Preference number: 5 (lower is better) Translates to: LMMSSPGCGYSSTGS*SSMFIRPISSGSAP Trigger: GGGTGCCGACCCTGATGAAATCGGCCTGATGAACATTGACGAGCAGCTGCCGGTGCTGGAGTACCCACAGCCGGGGCTGGACATCATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCGGCTGCTGTAGACAGCATCCTCTCACTCCTCCTCGGCTCTCTCCACCACCTCTTGCAGCAAGCTaGTACCTGACTTGGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGGCCRQHPLTPPRLSPPPLAAS*YLTWGR Trigger: CCTACCCCAAGTCAGGTACAAGCTTGCTGCAAGAGG...TGGTGGAGAGAGCCGAGGAGGAGTGAGAGGATGCTGTCTACAGCAGCCGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 90 bp | TCCAGCTGGGCCTTATCACAGGACACACCCAGGAATCTGGCCAGCTaGTCCACCATGGTCACCAGGTCCCGGTGCATGTCTTCATACTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSWALSQDTPRNLAS*STMVTRSRCMSSYL Trigger: TAAGTATGAAGACATGCACCGGGACCTGGTGACCATGGTGGAGCAGCTGGCCAGATTCCTGGGTGTGTCCTGTGATAAGGCCCAGCTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGGGCTCTTCTGTGCTGGGGCTGAGAGAGATGCGCGCTTAGAGGTGTTTGGAGATGTCAGTTCCTaGATGATGTCCAGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLGLFCAGAERDARLEVFGDVSS*MMSSPG Trigger: GCCGGGGCTGGACATCATCAAGGAACTGACATCTCC...AAACACCTCTAAGCGCGCATCTCTCTCAGCCCCAGCACAGAAGAGCCCAAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR CAA 90 bp | TTCCTTGGGCTCTTCTGTGCTGGGGCTGAGAGAGATGCGCGCTTAGAGGTGTTTCCTCTTGCAGCAAGCTaGTACCTGACTTGGGGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLGLFCAGAERDARLEVFPLAAS*YLTWGR Trigger: CCTACCCCAAGTCAGGTACAAGCTTGCTGCAAGAGG...AAACACCTCTAAGCGCGCATCTCTCTCAGCCCCAGCACAGAAGAGCCCAAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR CAA 90 bp | TTAGAGGTGTTTCTGAAAACGGCCTGGGACAGGTCCTGGCTTGGTATCAGGATGTGGAACTCGAAGTACTaGCTCTCGAACTCGCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LEVFLKTAWDRSWLGIRMWNSKY*LSNSPG Trigger: CCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCA...CATCCTGATACCAAGCCAGGACCTGTCCCAGGCCGTTTTCAGAAACACCTCTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000082365.6 |
||
| CDS-3UTR CAA 90 bp | CCAGCGAGGAATAAAAGAACGCAAACAGGACTTTTAGCTAGTAGAGCGTCCGGGACCTTGGAGTCCCCATaGTGGAGGTCAGAGGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PARNKRTQTGLLASRASGTLESP*WRSEGR Trigger: CCTGCCCTCTGACCTCCACAATGGGGACTCCAAGGT...CCCGGACGCTCTACTAGCTAAAAGTCCTGTTTGCGTTCTTTTATTCCTCGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS CAA 90 bp | CCGCGGCAGAAGGGCGGCAGCCGCACGCCATGGAACTCGAAGTACTaGCTCTCGAACTCGCCCGGGGTGCCCGGGGTCTCCGCTTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PRQKGGSRTPWNSKY*LSNSPGVPGVSASL Trigger: GAGCGAAGCGGAGACCCCGGGCACCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 72 bp | AGGGCGGCAGCCGCACGCCATGGAACTCGAAGTACTTaGTCTCGAACTCGCCCGGGGTGCCCGGGGTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RAAAARHGTRST*SRTRPGCPGSP Trigger: CGGAGACCCCGGGCACCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS CAA 72 bp | AAGGGCGGCAGCCGCACGCCATGGAACTCGAAGTACTaGCTCTCGAACTCGCCCGGGGTGCCCGGGGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KGGSRTPWNSKY*LSNSPGVPGVS Trigger: GGAGACCCCGGGCACCCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS CCA 72 bp | ATCTTCCCGCGGCAGAAGGGCGGCAGCCGCACGCCATaGAACTCGAAGTACTTGCTCTCGAACTCGCCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: IFPRQKGGSRTP*NSKYLLSNSPG Trigger: CCCGGGCGAGTTCGAGAGCAAGTACTTCGAGTTCCATGGCGTGCGGCTGCCGCCCTTCTGCCGCGGGAAGAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 72 bp | TCCAGCCCCGGCTGTGGGTACTCCAGCACCGGCAGCTaGTCGTCAATGTTCATCAGGCCGATTTCATCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SSPGCGYSSTGS*SSMFIRPISSG Trigger: CCCTGATGAAATCGGCCTGATGAACATTGACGAGCAGCTGCCGGTGCTGGAGTACCCACAGCCGGGGCTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS CAA 90 bp | CCATTGTGGAGGTCAGAGGGCAGGAAGCGGTACGGGAGGTGGCTCTaGATGAGGCGGGGAGATGTCAGTTCCTTGATGATGTCCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PLWRSEGRKRYGRWL*MRRGDVSSLMMSSP Trigger: GGGGCTGGACATCATCAAGGAACTGACATCTCCCCGCCTCATCAAGAGCCACCTCCCGTACCGCTTCCTGCCCTCTGACCTCCACAATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 72 bp | GCCTTATCACAGGACACACCCAGGAATCTGGCCAGCTaGTCCACCATGGTCACCAGGTCCCGGTGCATGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALSQDTPRNLAS*STMVTRSRCMS Trigger: AGACATGCACCGGGACCTGGTGACCATGGTGGAGCAGCTGGCCAGATTCCTGGGTGTGTCCTGTGATAAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS GCA 72 bp | CCACCTCAAGGCGATCTTCTGAGTAAAGAGGCAATGTaGCCGACCCACAGGCAGGGCCTCGGCATTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPQGDLLSKEAM*PTHRQGLGIAA Trigger: TGCTGCAATGCCGAGGCCCTGCCTGTGGGTCGGGCACATTGCCTCTTTACTCAGAAGATCGCCTTGAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000229826.2 |
||
| CDS CCA 72 bp | AGATGTCAGTTCCTTGATGATGTCCAGCCCCGGCTGTaGGTACTCCAGCACCGGCAGCTGCTCGTCAATGTT | + |
|
Preference number: 6 (lower is better) Translates to: RCQFLDDVQPRL*VLQHRQLLVNV Trigger: AACATTGACGAGCAGCTGCCGGTGCTGGAGTACCCACAGCCGGGGCTGGACATCATCAAGGAACTGACATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS TCA 72 bp | GCTCAAACCAGGAGCCGTAGCCCAGTTTGTCATTCATaGACCTCCGACAGAACTCCTGGAAGGTGCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: AQTRSRSPVCHS*TSDRTPGRCLG Trigger: ACCGAGGCACCTTCCAGGAGTTCTGTCGGAGGTTCATGAATGACAAACTGGGCTACGGCTCCTGGTTTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||
| CDS CCA 72 bp | TCCGACAGAACTCCTGGAAGGTGCCTCGGTAGCTCATaGTCCGCAGCGAGCGGTGGAACTGATAGTAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: SDRTPGRCLGSS*SAASGGTDSKI Trigger: TATCTTACTATCAGTTCCACCGCTCGCTGCGGACCATGAGCTACCGAGGCACCTTCCAGGAGTTCTGTCGGA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000082365.6 ENSMUST00000229826.2 |
||