Pregenerated sensors for SULT2A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030378Ensembl transcript IDs: ENSMUST00000063509.11, ENSMUST00000125941.3, ENSMUST00000168252.9, ENSMUST00000209425.2, ENSMUST00000210396.2, ENSMUST00000211800.2
Found 70 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAAAGGTATGAGGAGCACTCTACTGCTTCATGGCTTGTCCAGGCATaGAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAA | + |
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Preference number: 1 (lower is better) Translates to: QRYEEHSTASWLVQA*SFPGKGWEKLRNIK Trigger: TTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCTCCTCATACCTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CCA 90 bp | GGAGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTaGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAAT | + |
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Preference number: 1 (lower is better) Translates to: GALYCFMACPGMKLP*KGVGEVKKHQKQLN Trigger: ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR TCA 90 bp | GGTCATATTTTAGGAAAATCCTTACTAAGATTTGAAAGTCACCTGTaGCCCACAGGGCCAGACATAGAGGTGTACAGAAGTGGTCCAAGA | + |
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Preference number: 1 (lower is better) Translates to: GHILGKSLLRFESHL*PTGPDIEVYRSGPR Trigger: TCTTGGACCACTTCTGTACACCTCTATGTCTGGCCCTGTGGGTCACAGGTGACTTTCAAATCTTAGTAAGGATTTTCCTAAAATATGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAATTTGAAAGTCACCTGTaGCCCACAGGGCCAGACATA | + |
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Preference number: 2 (lower is better) Translates to: MACPGMKLPWKGVGEVKKFESHL*PTGPDI Trigger: TATGTCTGGCCCTGTGGGTCACAGGTGACTTTCAAA...TTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR TCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTCATGAAAAGAGCTCTTaGGGAAAATCAGCTGCTTTC | + |
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Preference number: 2 (lower is better) Translates to: STLLLHGLSRHEASLERGHEKSS*GKSAAF Trigger: GAAAGCAGCTGATTTTCCTCAAGAGCTCTTTTCATG...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGGGCATGAAGCTTCCCTaGAAAGGGGTGGGAGAAGTT | + |
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Preference number: 2 (lower is better) Translates to: ANLISSVLESSPACYTNRGMKLP*KGVGEV Trigger: AACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCC...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTGGGTGGAGCCATCATaGTGCATTTGTGGAAGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ALYWNLPQPVTQTGRHLFWVEPS*CICGSL Trigger: TAGACTTCCACAAATGCACCATGATGGCTCCACCCA...GAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTCAGAAATTTTATGGGTaGAGCCATCATGGTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: STLLLHGLSRHEASLERGQKFYG*SHHGAF Trigger: AAATGCACCATGATGGCTCCACCCATAAAATTTCTG...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAAAGTAGGCTCATGACCTaGATTTTCAACAGCTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: MACPGMKLPWKGVGEVKKSRLMT*IFNSWS Trigger: TGACCAGCTGTTGAAAATCCAGGTCATGAGCCTACT...TTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTACTTGGCATGAAGCTTCCCTaGAAAGGGGTGGGAGAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: VLESSPACYTNRQASFLLGMKLP*KGVGEV Trigger: AACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCC...AAGTAGAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTAAGATTCTTTATCCTTaGAGTCACTTCTCTAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: STLLLHGLSRHEASLERGKILYP*SHFSST Trigger: TGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTT...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATTGTTGGTGCCAGGATTaGACTCAGATCCTCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNCWCQD*TQILMV Trigger: GACCATGAGGATCTGAGTTCAATCCTGGCACCAACA...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATTTTGAAAGTCACCTGTaGCCCACAGGGCCAGACATA | + |
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Preference number: 2 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNFESHL*PTGPDI Trigger: TATGTCTGGCCCTGTGGGTCACAGGTGACTTTCAAA...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR GCA 90 bp | GAGGCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACGTGGAGCCATCATGGTaGATTTGTGGAAGTCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: EANLISSVLESSPACYTNVEPSW*ICGSLR Trigger: TCTTAGACTTCCACAAATGCACCATGATGGCTCCAC...GTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGAGGTGTACAGAAGTaGTCCAAGAGCAGAGTTATG | + |
|
Preference number: 2 (lower is better) Translates to: EANLISSVLESSPACYTNRGVQK*SKSRVM Trigger: CATAACTCTGCTCTTGGACCACTTCTGTACACCTCT...GTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGCCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACCAGAAATTTTATGGGTaGAGCCATCATGGTGCATTT | + |
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Preference number: 2 (lower is better) Translates to: EANLISSVLESSPACYTNQKFYG*SHHGAF Trigger: AAATGCACCATGATGGCTCCACCCATAAAATTTCTG...GTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGCCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGAAGATTCTTTATCCTTaGAGTCACTTCTCTAGCACA | + |
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Preference number: 2 (lower is better) Translates to: ANLISSVLESSPACYTNRKILYP*SHFSST Trigger: TGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTT...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACGAACTCAGATCCTCATaGTCGTTAACAAGATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: EANLISSVLESSPACYTNELRSS*SLTRFF Trigger: AAAGAATCTTGTTAACGACCATGAGGATCTGAGTTC...GTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | GTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTACTTATTACAGAAATTTTATaGGTGGAGCCATCATGGTGC | + |
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Preference number: 2 (lower is better) Translates to: VLESSPACYTNRQASFLLITEIL*VEPSWC Trigger: GCACCATGATGGCTCCACCCATAAAATTTCTGTAAT...AAGTAGAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATTGCTTTCTCCTGAAATaGTTTATCAAAGGCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNCFLLK*FIKGFS Trigger: GCTGAAGCCTTTGATAAAGCATTTCAGGAGAAAGCA...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATATTACAGAAATTTTATaGGTGGAGCCATCATGGTGC | + |
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Preference number: 2 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNITEIL*VEPSWC Trigger: GCACCATGATGGCTCCACCCATAAAATTTCTGTAAT...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGGAAAATCAGCTGCTTTCTCCTGAAATGCTTTATCAAAGGCTTCAGCCTGGAACTCAGATCCTCATaGTCGTTAACAAGATTCTTT | + |
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Preference number: 2 (lower is better) Translates to: LRKISCFLLKCFIKGFSLELRSS*SLTRFF Trigger: AAAGAATCTTGTTAACGACCATGAGGATCTGAGTTC...CAGGCTGAAGCCTTTGATAAAGCATTTCAGGAGAAAGCAGCTGATTTTCCTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209425.2 |
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| 3UTR TCA 72 bp | GAGGAGCACTCTACTGCTTCATGGCTTGTCCAGGCATaGAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGA | + |
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Preference number: 3 (lower is better) Translates to: EEHSTASWLVQA*SFPGKGWEKLR Trigger: TCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGATGTTGGTGCCAGGATaGAACTCAGATCCTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: ANLISSVLESSPACYTNRMLVPG*NSDPHG Trigger: ACCATGAGGATCTGAGTTCAATCCTGGCACCAACAT...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CAA 90 bp | GTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTACTTATGTTGGTGCCAGGATaGAACTCAGATCCTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: VLESSPACYTNRQASFLLMLVPG*NSDPHG Trigger: ACCATGAGGATCTGAGTTCAATCCTGGCACCAACAT...AAGTAGAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CCA 72 bp | GTGACCCACAGGGCCAGACATAGAGGTGTACAGAAGTaGTCCAAGAGCAGAGTTATGATTGTTTCTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: VTHRARHRGVQK*SKSRVMIVSEF Trigger: AAATTCAGAAACAATCATAACTCTGCTCTTGGACCACTTCTGTACACCTCTATGTCTGGCCCTGTGGGTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CCA 72 bp | TACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTaGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAA | + |
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Preference number: 3 (lower is better) Translates to: YCFMACPGMKLP*KGVGEVKKHQK Trigger: TTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATATGTTGGTGCCAGGATaGAACTCAGATCCTCATGGT | + |
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Preference number: 3 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNMLVPG*NSDPHG Trigger: ACCATGAGGATCTGAGTTCAATCCTGGCACCAACAT...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR TCA 72 bp | TTAGGAAAATCCTTACTAAGATTTGAAAGTCACCTGTaGCCCACAGGGCCAGACATAGAGGTGTACAGAAGT | + |
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Preference number: 3 (lower is better) Translates to: LGKSLLRFESHL*PTGPDIEVYRS Trigger: ACTTCTGTACACCTCTATGTCTGGCCCTGTGGGTCACAGGTGACTTTCAAATCTTAGTAAGGATTTTCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR TCA 72 bp | AGCTGGTCATATTTTAGGAAAATCCTTACTAAGATTTaGAAGTCACCTGTGACCCACAGGGCCAGACATAGA | + |
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Preference number: 3 (lower is better) Translates to: SWSYFRKILTKI*KSPVTHRARHR Trigger: TCTATGTCTGGCCCTGTGGGTCACAGGTGACTTTCAAATCTTAGTAAGGATTTTCCTAAAATATGACCAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR-3UTR CAA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATGCCATCATGGTGCATTaGTGGAAGTCTAAGAATAAT | + |
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Preference number: 3 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNAIMVH*WKSKNN Trigger: ATTATTCTTAGACTTCCACAAATGCACCATGATGGC...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CCA 72 bp | CAGATCCTCATGGTCGTTAACAAGATTCTTTATCCTTaGAGTCACTTCTCTAGCACAATACTTGATTACTAC | + |
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Preference number: 3 (lower is better) Translates to: QILMVVNKILYP*SHFSSTILDYY Trigger: GTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTTGTTAACGACCATGAGGATCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR GCA 72 bp | TTAATTACAGAAATTTTATGGGTGGAGCCATCATGGTaGATTTGTGGAAGTCTAAGAATAATTTCAGGAACT | + |
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Preference number: 3 (lower is better) Translates to: LITEILWVEPSW*ICGSLRIISGT Trigger: AGTTCCTGAAATTATTCTTAGACTTCCACAAATGCACCATGATGGCTCCACCCATAAAATTTCTGTAATTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CAA 72 bp | TTCAAAGGTATGAGGAGCACTCTACTGCTTCATGGCTaGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: FKGMRSTLLLHG*SRHEASLERGG Trigger: CCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCTCCTCATACCTTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTATGTGGGATCTCCCTTaGTCAGAATCAAGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: STLLLHGLSRHEASLERGMWDLP*SESSRQ Trigger: TTGTCTGCTTGATTCTGACCAAGGGAGATCCCACAT...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAAGAAGTAGTGATAGCCTaGCACAAGAACATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: MACPGMKLPWKGVGEVKKEVVIA*HKNISG Trigger: CCCAGAGATGTTCTTGTGTCAGGCTATCACTACTTC...TTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTTCAGCTGCTTTCTCCTaGAATGCTTTATCAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: STLLLHGLSRHEASLERGSAAFS*NALSKA Trigger: AGCCTTTGATAAAGCATTTCAGGAGAAAGCAGCTGA...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR TCA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGGAAGTAGTGATAGCCTaGCACAAGAACATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ANLISSVLESSPACYTNREVVIA*HKNISG Trigger: CCCAGAGATGTTCTTGTGTCAGGCTATCACTACTTC...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATGAAAAGAGCTCTTaGGGAAAATCAGCTGCTTTC | + |
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Preference number: 4 (lower is better) Translates to: MACPGMKLPWKGVGEVKKHEKSS*GKSAAF Trigger: GAAAGCAGCTGATTTTCCTCAAGAGCTCTTTTCATG...TTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR TCA 90 bp | GTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTACTTGAAGTAGTGATAGCCTaGCACAAGAACATCTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VLESSPACYTNRQASFLLEVVIA*HKNISG Trigger: CCCAGAGATGTTCTTGTGTCAGGCTATCACTACTTC...AAGTAGAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR GCA 90 bp | AGCACTCTACTGCTTCATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGAGATAAATCACCTTTaGCTTAGAACTGAAGAAAGA | + |
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Preference number: 4 (lower is better) Translates to: STLLLHGLSRHEASLERGEINHL*LRTEER Trigger: TCTTTCTTCAGTTCTAAGGCAAAGGTGATTTATCTC...ACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCATGAAGCAGTAGAGTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | ATGGCTTGTCCAGGCATGAAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAATTTGAGAGACATGACTaGGATATCATCCTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: MACPGMKLPWKGVGEVKKFERHD*DIILSF Trigger: GAAAGAAAGGATGATATCTCAGTCATGTCTCTCAAA...TTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTTCATGCCTGGACAAGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR TCA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGTCAGCTGCTTTCTCCTaGAATGCTTTATCAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: ANLISSVLESSPACYTNRSAAFS*NALSKA Trigger: AGCCTTTGATAAAGCATTTCAGGAGAAAGCAGCTGA...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR TCA 90 bp | GAGGCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACTTTGAGAGACATGACTaGGATATCATCCTTTCTTTC | + |
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Preference number: 4 (lower is better) Translates to: EANLISSVLESSPACYTNFERHD*DIILSF Trigger: GAAAGAAAGGATGATATCTCAGTCATGTCTCTCAAA...GTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGCCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR CCA 90 bp | GTCGTTAACAAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTTGGCAATTGTAGATTaGACCCATGTGGGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKILYPWSHFSSTILDLAIVD*THVGSP Trigger: GGGAGATCCCACATGGGTCCAATCTACAATTGCCAA...ATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTTGTTAACGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | GTCGTTAACAAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATGACTTTGGAAATAGTTaGATGGGAAGGAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VVNKILYPWSHFSSTILDDFGNS*MGRREA Trigger: GGCCTCTCTCCTTCCCATCCAACTATTTCCAAAGTC...ATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTTGTTAACGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | GCCAATCTGATTAGCTCTGTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGAAAATATATTTTCCATaGCACTTGTTCCTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ANLISSVLESSPACYTNRKIYFP*HLFLSL Trigger: CAGGGAAAGGAACAAGTGCCATGGAAAATATATTTT...CCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATACAGAGCTAATCAGATTGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR GCA 90 bp | GTATTGGAATCTTCCCCAGCCTGTTACACAAACAGGCAGGCATCTTTTCTACTTGAGATAAATCACCTTTaGCTTAGAACTGAAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLESSPACYTNRQASFLLEINHL*LRTEER Trigger: TCTTTCTTCAGTTCTAAGGCAAAGGTGATTTATCTC...AAGTAGAAAAGATGCCTGCCTGTTTGTGTAACAGGCTGGGGAAGATTCCAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | CAAGTACAAGGAAAACAAATCATAGAGAGTATTCCAATAAGATCCACAGTGTTGTTGGCAATTGTAGATTaGACCCATGTGGGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QVQGKQIIESIPIRSTVLLAIVD*THVGSP Trigger: GGGAGATCCCACATGGGTCCAATCTACAATTGCCAA...CAACACTGTGGATCTTATTGGAATACTCTCTATGATTTGTTTTCCTTGTACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | CAAGTACAAGGAAAACAAATCATAGAGAGTATTCCAATAAGATCCACAGTGTTGGACTTTGGAAATAGTTaGATGGGAAGGAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QVQGKQIIESIPIRSTVLDFGNS*MGRREA Trigger: GGCCTCTCTCCTTCCCATCCAACTATTTCCAAAGTC...CAACACTGTGGATCTTATTGGAATACTCTCTATGATTTGTTTTCCTTGTACTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | ATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACAGTATGGACTTTGGAAATAGTTaGATGGGAAGGAGAGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILYPWSHFSSTILDYYSMDFGNS*MGRREA Trigger: GGCCTCTCTCCTTCCCATCCAACTATTTCCAAAGTC...CATACTGTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CAA 72 bp | AATAATTTCAGGAACTACTTCTTTCCTTCAACTATGTaGGTGCCAGGATTGAACTCAGATCCTCATGGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NNFRNYFFPSTM*VPGLNSDPHGR Trigger: ACGACCATGAGGATCTGAGTTCAATCCTGGCACCAACATAGTTGAAGGAAAGAAGTAGTTCCTGAAATTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | AAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACAGTATGTGGGATCTCCCTTaGTCAGAATCAAGCAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: KILYPWSHFSSTILDYYSMWDLP*SESSRQ Trigger: TTGTCTGCTTGATTCTGACCAAGGGAGATCCCACAT...ACTGTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | AAGCTTCCCTGGAAAGGGGTGGGAGAAGTTAAGAAACATCAAAAACAGCTGAATAAAATATATTTTCCATaGCACTTGTTCCTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KLPWKGVGEVKKHQKQLNKIYFP*HLFLSL Trigger: CAGGGAAAGGAACAAGTGCCATGGAAAATATATTTT...ATTCAGCTGTTTTTGATGTTTCTTAACTTCTCCCACCCCTTTCCAGGGAAGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | AACAAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACCCTGTTTTAGAGCATTaGAGTAGTGATAGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: NKILYPWSHFSSTILDYYPVLEH*SSDSLT Trigger: TGTCAGGCTATCACTACTTCAATGCTCTAAAACAGG...GTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR TCA 90 bp | ATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACAGTATGCCTGTTTTAGAGCATTaGAGTAGTGATAGCCTGACA | + |
|
Preference number: 4 (lower is better) Translates to: ILYPWSHFSSTILDYYSMPVLEH*SSDSLT Trigger: TGTCAGGCTATCACTACTTCAATGCTCTAAAACAGG...CATACTGTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR GCA 90 bp | AAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACAGTTGCTTTCTCCTGAAATaGTTTATCAAAGGCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KILYPWSHFSSTILDYYSCFLLK*FIKGFS Trigger: GCTGAAGCCTTTGATAAAGCATTTCAGGAGAAAGCA...ACTGTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 |
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| CDS-3UTR CCA 90 bp | ATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATTACTACAGTATGTTCAAATTCTATCCATaGTGTGCGCTCATTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILYPWSHFSSTILDYYSMFKFYP*CALIGN Trigger: ATTGCCAATGAGCGCACACCATGGATAGAATTTGAA...CATACTGTAGTAATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| CDS-3UTR CCA 90 bp | GTCGTTAACAAGATTCTTTATCCTTGGAGTCACTTCTCTAGCACAATACTTGATAAAATATATTTTCCATaGCACTTGTTCCTTTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VVNKILYPWSHFSSTILDKIYFP*HLFLSL Trigger: CAGGGAAAGGAACAAGTGCCATGGAAAATATATTTT...ATCAAGTATTGTGCTAGAGAAGTGACTCCAAGGATAAAGAATCTTGTTAACGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063509.11 ENSMUST00000168252.9 ENSMUST00000209425.2 |
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| 3UTR CAA 72 bp | CAAATCATAGAGAGTATTCCAATAAGATCCACAGTGTaGATTATTCCCATGAAAAGAGCTCTTGAGGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QIIESIPIRSTV*IIPMKRALEEN Trigger: ATTTTCCTCAAGAGCTCTTTTCATGGGAATAATCAACACTGTGGATCTTATTGGAATACTCTCTATGATTTG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209425.2 |
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| CDS CCA 90 bp | TTTTCAAATTCTATCCATGGTGTGCGCTCATTGGCAATTGTAGATTaGACCCATGTGGGATCTCCCTTGGTCAGAATCAAGCAGACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FSNSIHGVRSLAIVD*THVGSPLVRIKQTI Trigger: AATTGTCTGCTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAATGAGCGCACACCATGGATAGAATTTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS TCA 90 bp | CAATTTCATTCAACCAGTGGGTTCCTGATTTTGGATAAGTCACTATaGTCGTGTCTTCATCCCTTACCACAAACCTGTCACGTACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QFHSTSGFLILDKSL*SCLHPLPQTCHVLL Trigger: GAGAAGTACGTGACAGGTTTGTGGTAAGGGATGAAGACACGATCATAGTGACTTATCCAAAATCAGGAACCCACTGGTTGAATGAAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS TCA 90 bp | CTTGGTCAGAATCAAGCAGACAATTTCATTCAACCAGTGGGTTCCTaGTTTTGGATAAGTCACTATGATCGTGTCTTCATCCCTTACCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGQNQADNFIQPVGS*FWISHYDRVFIPYH Trigger: GTGGTAAGGGATGAAGACACGATCATAGTGACTTATCCAAAATCAGGAACCCACTGGTTGAATGAAATTGTCTGCTTGATTCTGACCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS CCA 72 bp | TCTATCCATGGTGTGCGCTCATTGGCAATTGTAGATTaGACCCATGTGGGATCTCCCTTGGTCAGAATCAAG | + |
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Preference number: 6 (lower is better) Translates to: SIHGVRSLAIVD*THVGSPLVRIK Trigger: CTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAATGAGCGCACACCATGGATAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS CAA 90 bp | GTGCGCTCATTGGCAATTGTAGATTGGACCCATGTGGGATCTCCCTaGGTCAGAATCAAGCAGACAATTTCATTCAACCAGTGGGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VRSLAIVDWTHVGSP*VRIKQTISFNQWVP Trigger: AGGAACCCACTGGTTGAATGAAATTGTCTGCTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAATGAGCGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS CAA 72 bp | TTCTATCCATGGTGTGCGCTCATTGGCAATTGTAGATaGGACCCATGTGGGATCTCCCTTGGTCAGAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: FYPWCALIGNCR*DPCGISLGQNQ Trigger: TTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAATGAGCGCACACCATGGATAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS TCA 72 bp | TCAACCAGTGGGTTCCTGATTTTGGATAAGTCACTATaGTCGTGTCTTCATCCCTTACCACAAACCTGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: STSGFLILDKSL*SCLHPLPQTCH Trigger: GTGACAGGTTTGTGGTAAGGGATGAAGACACGATCATAGTGACTTATCCAAAATCAGGAACCCACTGGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS CAA 72 bp | TTGGCAATTGTAGATTGGACCCATGTGGGATCTCCCTaGGTCAGAATCAAGCAGACAATTTCATTCAACCAG | + |
|
Preference number: 6 (lower is better) Translates to: LAIVDWTHVGSP*VRIKQTISFNQ Trigger: CTGGTTGAATGAAATTGTCTGCTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS CAA 90 bp | ATTTTCAAATTCTATCCATGGTGTGCGCTCATTGGCAATTGTAGATaGGACCCATGTGGGATCTCCCTTGGTCAGAATCAAGCAGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: IFKFYPWCALIGNCR*DPCGISLGQNQADN Trigger: ATTGTCTGCTTGATTCTGACCAAGGGAGATCCCACATGGGTCCAATCTACAATTGCCAATGAGCGCACACCATGGATAGAATTTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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| CDS TCA 72 bp | CACAAACCTGTCACGTACTTCTCTTATGATTTCTTGTaGGTAGTAAACTGTAGGGAATGGTATCCCTTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: HKPVTYFSYDFL*VVNCREWYPFY Trigger: ATAGAAGGGATACCATTCCCTACAGTTTACTACTCACAAGAAATCATAAGAGAAGTACGTGACAGGTTTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000063509.11 ENSMUST00000125941.3 ENSMUST00000168252.9 ENSMUST00000209425.2 ENSMUST00000210396.2 ENSMUST00000211800.2 |
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