RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SULT2A6 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070810

Ensembl transcript IDs: ENSMUST00000076576.7, ENSMUST00000184731.8

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR GCA 90 bp TATTCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTGGAACACTTCCAGTCCCCAGTTGTaGCTTTTTCATGTCTTCATA +
Preference number: 2 (lower is better)
Translates to: YSHGNMPGGKPTILSWNTSSPQL*LFHVFI
Trigger: TATGAAGACATGAAAAAGGCACAACTGGGGACTGGA...AGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
3UTR CAA 90 bp ATAACTTATTCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTaGTCCTGGAACACTTTATCGAAGGCTTCAGTTTGGGCTACTGTA +
Preference number: 2 (lower is better)
Translates to: ITYSHGNMPGGKPTI*SWNTLSKASVWATV
Trigger: TACAGTAGCCCAAACTGAAGCCTTCGATAAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGAATAAGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
3UTR CCA 72 bp GGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTaGAACACTTTATCGAAGGCTTCAGTTTGGGCTACT +
Preference number: 3 (lower is better)
Translates to: GNMPGGKPTILS*NTLSKASVWAT
Trigger: AGTAGCCCAAACTGAAGCCTTCGATAAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
3UTR CAA 72 bp TCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTaGTCCTGGAACACTTTATCGAAGGCTTCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: SHGNMPGGKPTI*SWNTLSKASVW
Trigger: CCAAACTGAAGCCTTCGATAAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR CCA 90 bp AGTCCCCAGTTGTGCCTTTTTCATGTCTTCATAGTACAGCACCAAGAAGTTGTTAGATGGATGGGAAGATaGGAGGTCATGAGTCGTGGT +
Preference number: 4 (lower is better)
Translates to: SPQLCLFHVFIVQHQEVVRWMGR*EVMSRG
Trigger: ACCACGACTCATGACCTCCCATCTTCCCATCCATCT...AACAACTTCTTGGTGCTGTACTATGAAGACATGAAAAAGGCACAACTGGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR CCA 90 bp CTTATTCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTGGAACAATGGACAGCCAGCCATaGATGTGTTCAAACCATGAT +
Preference number: 4 (lower is better)
Translates to: LIPMGTCLVENQPFCPGTMDSQP*MCSNHD
Trigger: ATCATGGTTTGAACACATCCATGGCTGGCTGTCCAT...TGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGAATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR CCA 90 bp TTCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTGGAACACTTTGTGGTCCTTCCTTACTaGTTAATACAGAATATCCAC +
Preference number: 4 (lower is better)
Translates to: FPWEHAWWKTNHFVLEHFVVLPY*LIQNIH
Trigger: GTGGATATTCTGTATTAACCAGTAAGGAAGGACCAC...AAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR TCA 90 bp TCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTGGAACACTTTAGATGTGTTCAAACCATaGTCCATATCTAACTTAGCT +
Preference number: 4 (lower is better)
Translates to: SHGNMPGGKPTILSWNTLDVFKP*SISNLA
Trigger: AGCTAAGTTAGATATGGATCATGGTTTGAACACATC...TAAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR TCA 90 bp CCAGTTGTGCCTTTTTCATGTCTTCATAGTACAGCACCAAGAAGTTGTTCCTTTTCCACAATTTCTTTTTaGACCCACATATCAGGAAGA +
Preference number: 4 (lower is better)
Translates to: PVVPFSCLHSTAPRSCSFSTISF*THISGR
Trigger: TCTTCCTGATATGTGGGTTCAAAAAGAAATTGTGGA...AAAGGAACAACTTCTTGGTGCTGTACTATGAAGACATGAAAAAGGCACAACTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS-3UTR CAA 90 bp TTCCCATGGGAACATGCCTGGTGGAAAACCAACCATTTTGTCCTGGAACACTTTCCAATTAGGCACAGATaGGATCCACTTGGGATCTCC +
Preference number: 5 (lower is better)
Translates to: FPWEHAWWKTNHFVLEHFPIRHR*DPLGIS
Trigger: GGAGATCCCAAGTGGATCCAATCTGTGCCTAATTGG...AAAGTGTTCCAGGACAAAATGGTTGGTTTTCCACCAGGCATGTTCCCATGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS TCA 90 bp AATTGGACATGTTGTTTTCTTTCATGGCTTGGAAGGAGCTGTACTTaGGGACGAGATCCAGCTCATCTGGCCCTAAATTTTTCCCTAGGA +
Preference number: 5 (lower is better)
Translates to: NWTCCFLSWLGRSCT*GRDPAHLALNFSLG
Trigger: TCCTAGGGAAAAATTTAGGGCCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACATGTCCAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS-3UTR CAA 90 bp AGTCCCCAGTTGTGCCTTTTTCATGTCTTCATAGTACAGCACCAAGAAGTTGTTTCTCAATCAGCCAGTTaGTTCCTGACTTGGGGTAAG +
Preference number: 5 (lower is better)
Translates to: SPQLCLFHVFIVQHQEVVSQSAS*FLTWGK
Trigger: CTTACCCCAAGTCAGGAACAAACTGGCTGATTGAGA...AACAACTTCTTGGTGCTGTACTATGAAGACATGAAAAAGGCACAACTGGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000184731.8
CDS CCA 90 bp TACAGCACCAAGAAGTTGTTCCTTTCTCTCATGGACAGCCAGCCATaGATGTGTTCAAACCATGATCCATATCTAACATTTCCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: YSTKKLFLSLMDSQP*MCSNHDPYLTFPFR
Trigger: CCTGAAAGGAAATGTTAGATATGGATCATGGTTTGAACACATCCATGGCTGGCTGTCCATGAGAGAAAGGAACAACTTCTTGGTGCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS CCA 90 bp CATCTGGCCCTAAATTTTTCCCTAGGAAGTCACAGATCTTCTTTATaGTTCCCTTTGCATCCTTTTTCATGTCTTCATAGTACAGCACCA +
Preference number: 5 (lower is better)
Translates to: HLALNFSLGSHRSSL*FPLHPFSCLHSTAP
Trigger: TGGTGCTGTACTATGAAGACATGAAAAAGGATGCAAAGGGAACCATAAAGAAGATCTGTGACTTCCTAGGGAAAAATTTAGGGCCAGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS CAA 90 bp TTCCTTAATGAGACTATAATTGGACATGTTGTTTTCTTTCATGGCTaGGAAGGAGCTGTACTTGAGGACGAGATCCAGCTCATCTGGCCC +
Preference number: 6 (lower is better)
Translates to: FLNETIIGHVVFFHG*EGAVLEDEIQLIWP
Trigger: GGGCCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACATGTCCAATTATAGTCTCATTAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS TCA 72 bp TGTTGTTTTCTTTCATGGCTTGGAAGGAGCTGTACTTaGGGACGAGATCCAGCTCATCTGGCCCTAAATTTT +
Preference number: 6 (lower is better)
Translates to: CCFLSWLGRSCT*GRDPAHLALNF
Trigger: AAAATTTAGGGCCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS CAA 72 bp ATGTTGTTTTCTTTCATGGCTTGGAAGGAGCTGTACTaGAGGACGAGATCCAGCTCATCTGGCCCTAAATTT +
Preference number: 6 (lower is better)
Translates to: MLFSFMAWKELY*RTRSSSSGPKF
Trigger: AAATTTAGGGCCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS CCA 72 bp AAGAAGTTGTTCCTTTCTCTCATGGACAGCCAGCCATaGATGTGTTCAAACCATGATCCATATCTAACATTT +
Preference number: 6 (lower is better)
Translates to: KKLFLSLMDSQP*MCSNHDPYLTF
Trigger: AAATGTTAGATATGGATCATGGTTTGAACACATCCATGGCTGGCTGTCCATGAGAGAAAGGAACAACTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7
CDS CAA 90 bp CTAAATTTTTCCCTAGGAAGTCACAGATCTTCTTTATGGTTCCCTTaGCATCCTTTTTCATGTCTTCATAGTACAGCACCAAGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: LNFSLGSHRSSLWFP*HPFSCLHSTAPRSC
Trigger: ACAACTTCTTGGTGCTGTACTATGAAGACATGAAAAAGGATGCAAAGGGAACCATAAAGAAGATCTGTGACTTCCTAGGGAAAAATTTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000076576.7