Pregenerated sensors for SULT2A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074377Ensembl transcript IDs: ENSMUST00000108520.4, ENSMUST00000165167.8
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACAGTGAGCGGTCCTGAATaGACACAGTTTGGATCCACT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTVSGPE*TQFGST Trigger: AGTGGATCCAAACTGTGTCCATTCAGGACCGCTCAC...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAAGATGGATGGGAAGATaGGAGGTTATGAGTCGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTRWMGR*EVMSRG Trigger: ACCACGACTCATAACCTCCCATCTTCCCATCCATCT...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACAGAATCTCCCTTGGTCTaGATCAAGCAGACAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTESPLV*IKQTIS Trigger: TGAGATTGTCTGCTTGATTCAGACCAAGGGAGATTC...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAGAATCTCCCTTGGTCTaGATCAAGCAGACAATCTCA | + |
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Preference number: 4 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRESPLV*IKQTIS Trigger: TGAGATTGTCTGCTTGATTCAGACCAAGGGAGATTC...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGATGTCCCATTCTCTCATaGACAGCCATCCACAAACAT | + |
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Preference number: 4 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRCPILS*TAIHKH Trigger: ATGTTTGTGGATGGCTGTCCATGAGAGAATGGGACA...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACATGTCCCATTCTCTCATaGACAGCCATCCACAAACAT | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTCPILS*TAIHKH Trigger: ATGTTTGTGGATGGCTGTCCATGAGAGAATGGGACA...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACACCGGCCATTTTCTCCTaGAAAACTTTATCGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTPAIFS*KTLSKA Trigger: AGCCTTCGATAAAGTTTTCCAGGAGAAAATGGCCGG...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACACCGGCCATTTTCTCCTaGAAAACTTTATCGAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTPAIFS*KTLSKA Trigger: AGCCTTCGATAAAGTTTTCCAGGAGAAAATGGCCGG...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAAGTTTGGATCCACTTTaGATCTCCCTTGGTCTGAAT | + |
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Preference number: 4 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTSLDPL*ISLGLN Trigger: ATTCAGACCAAGGGAGATTCAAAGTGGATCCAAACT...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAAGTTTGGATCCACTTTaGATCTCCCTTGGTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTSLDPL*ISLGLN Trigger: ATTCAGACCAAGGGAGATTCAAAGTGGATCCAAACT...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGTGGTCCTTGCTTATTaGTTAATGCAGGATATCCTC | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTVVLAY*LMQDIL Trigger: GAGGATATCCTGCATTAATCAATAAGCAAGGACCAC...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAAAAATAAGTTCTGAGTaGCCCTGGATTCTTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTKISSE*PWILHK Trigger: CTTGTGAAGAATCCAGGGTCACTCAGAACTTATTTT...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR TCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACAAAAATAAGTTCTGAGTaGCCCTGGATTCTTCACAAG | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTKISSE*PWILHK Trigger: CTTGTGAAGAATCCAGGGTCACTCAGAACTTATTTT...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR GCA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAAGCCATCCACAAACATaGTCAAACCATGATCCATAT | + |
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Preference number: 4 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTSHPQT*SNHDPY Trigger: ATATGGATCATGGTTTGAGCATGTTTGTGGATGGCT...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR GCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACAAGCCATCCACAAACATaGTCAAACCATGATCCATAT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTSHPQT*SNHDPY Trigger: ATATGGATCATGGTTTGAGCATGTTTGTGGATGGCT...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAACTTTGAATCTCCCTTaGTCTGAATCAAGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTTLNLP*SESSRQ Trigger: TTGTCTGCTTGATTCAGACCAAGGGAGATTCAAAGT...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACTTTGAATCTCCCTTaGTCTGAATCAAGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRTLNLP*SESSRQ Trigger: TTGTCTGCTTGATTCAGACCAAGGGAGATTCAAAGT...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACATGTTGTTTTCTTTCATaGCTTGGAAGGAGCTGTACT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTCCFLS*LGRSCT Trigger: AGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACA...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | CAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACACTCTTTGATATGATATaGCAGGAAAAGGTATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: QNRIYSMTTSRYSRYRTTLFDMI*QEKVSL Trigger: AAGGGATACCTTTTCCTGCCATATCATATCAAAGAG...TGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACACTCTTTGATATGATATaGCAGGAAAAGGTATCCCTT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTLFDMI*QEKVSL Trigger: AAGGGATACCTTTTCCTGCCATATCATATCAAAGAG...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACACACAGATCTTCTTTATaGTTCCCTTTGTATCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTHRSSL*FPLYPF Trigger: AAAAGGATACAAAGGGAACCATAAAGAAGATCTGTG...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACACACAGATCTTCTTTATaGTTCCCTTTGTATCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTHRSSL*FPLYPF Trigger: AAAAGGATACAAAGGGAACCATAAAGAAGATCTGTG...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CCA 90 bp | AGCGGTCCTGAATGGACACAGTTTGGATCCACTTTGAATCTCCCTTaGTCTGAATCAAGCAGACAATCTCAATCAACCAGTTTGTTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SGPEWTQFGSTLNLP*SESSRQSQSTSLFL Trigger: CAGGAACAAACTGGTTGATTGAGATTGTCTGCTTGATTCAGACCAAGGGAGATTCAAAGTGGATCCAAACTGTGTCCATTCAGGACCGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS GCA 90 bp | GAGAAGAGATGGATGGGAAGATGGGAGGTTATGAGTCGTGGTCCTTaGTTATTGATTAATGCAGGATATCCTCTATTAGTCTCTAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: EKRWMGRWEVMSRGP*LLINAGYPLLVSSQ Trigger: CTGGCTAGAGACTAATAGAGGATATCCTGCATTAATCAATAAGCAAGGACCACGACTCATAACCTCCCATCTTCCCATCCATCTCTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS TCA 90 bp | GTCCCATTCTCTCATGGACAGCCATCCACAAACATGCTCAAACCATaGTCCATATATGACATTTCCTTTGAGGAACCATTCAAAATAAGT | + |
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Preference number: 5 (lower is better) Translates to: VPFSHGQPSTNMLKP*SIYDISFEEPFKIS Trigger: ACTTATTTTGAATGGTTCCTCAAAGGAAATGTCATATATGGATCATGGTTTGAGCATGTTTGTGGATGGCTGTCCATGAGAGAATGGGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGATCTCAATCAACCAGTTaGTTCCTGACTTGGGGTAAG | + |
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Preference number: 5 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRSQSTS*FLTWGK Trigger: CTTACCCCAAGTCAGGAACAAACTGGTTGATTGAGA...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | AGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAACAGGAACACAGTTTGGATCCACTTaGAATCTCCCTTGGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: RIYSMTTSRYSRYRTTGTQFGST*NLPWSE Trigger: TTCAGACCAAGGGAGATTCAAAGTGGATCCAAACTG...TGTTCCTGTTGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACACAGTTTGGATCCACTTaGAATCTCCCTTGGTCTGAA | + |
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Preference number: 5 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTQFGST*NLPWSE Trigger: TTCAGACCAAGGGAGATTCAAAGTGGATCCAAACTG...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACATACAGTACCAAGAAGTaGTCCCATTCTCTCATGGAC | + |
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Preference number: 5 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTYSTKK*SHSLMD Trigger: GTCCATGAGAGAATGGGACAACTTCTTGGTACTGTA...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGATACAGTACCAAGAAGTaGTCCCATTCTCTCATGGAC | + |
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Preference number: 5 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRYSTKK*SHSLMD Trigger: GTCCATGAGAGAATGGGACAACTTCTTGGTACTGTA...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | TTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAACAGTTTTCTTTCATGGCTaGGAAGGAGCTGTACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: FQNRIYSMTTSRYSRYRTVFFHG*EGAVLE Trigger: CTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAAC...TGTTCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS-3UTR CAA 90 bp | CAATTCCAGAACAGGATTTATTCTATGACCACATCTAGGTATTCAAGATACAGAGTTTTCTTTCATGGCTaGGAAGGAGCTGTACTTGAG | + |
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Preference number: 5 (lower is better) Translates to: QFQNRIYSMTTSRYSRYRVFFHG*EGAVLE Trigger: CTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAAC...TCTGTATCTTGAATACCTAGATGTGGTCATAGAATAAATCCTGTTCTGGAATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS TCA 72 bp | TATCCTCTATTAGTCTCTAGCCAGGGTGAGCGGTCCTaGATGGACACAGTTTGGATCCACTTTGAATCTCCC | + |
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Preference number: 6 (lower is better) Translates to: YPLLVSSQGERS*MDTVWIHFESP Trigger: GGGAGATTCAAAGTGGATCCAAACTGTGTCCATTCAGGACCGCTCACCCTGGCTAGAGACTAATAGAGGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 90 bp | AGATGGATGGGAAGATGGGAGGTTATGAGTCGTGGTCCTTGCTTATaGATTAATGCAGGATATCCTCTATTAGTCTCTAGCCAGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RWMGRWEVMSRGPCL*INAGYPLLVSSQGE Trigger: CTCACCCTGGCTAGAGACTAATAGAGGATATCCTGCATTAATCAATAAGCAAGGACCACGACTCATAACCTCCCATCTTCCCATCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 90 bp | TTCGCTAACGAGACTATAATTGGACATGTTGTTTTCTTTCATGGCTaGGAAGGAGCTGTACTTGAGGACGAGATCCAGCTCATCTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: FANETIIGHVVFFHG*EGAVLEDEIQLIWF Trigger: GAACCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACATGTCCAATTATAGTCTCGTTAGCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 72 bp | GAGACTATAATTGGACATGTTGTTTTCTTTCATGGCTaGGAAGGAGCTGTACTTGAGGACGAGATCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: ETIIGHVVFFHG*EGAVLEDEIQL Trigger: GAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACATGTCCAATTATAGTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CCA 72 bp | GAATGGACACAGTTTGGATCCACTTTGAATCTCCCTTaGTCTGAATCAAGCAGACAATCTCAATCAACCAGT | + |
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Preference number: 6 (lower is better) Translates to: EWTQFGSTLNLP*SESSRQSQSTS Trigger: ACTGGTTGATTGAGATTGTCTGCTTGATTCAGACCAAGGGAGATTCAAAGTGGATCCAAACTGTGTCCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS TCA 72 bp | TCTCATGGACAGCCATCCACAAACATGCTCAAACCATaGTCCATATATGACATTTCCTTTGAGGAACCATTC | + |
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Preference number: 6 (lower is better) Translates to: SHGQPSTNMLKP*SIYDISFEEPF Trigger: GAATGGTTCCTCAAAGGAAATGTCATATATGGATCATGGTTTGAGCATGTTTGTGGATGGCTGTCCATGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS GCA 72 bp | TTGTCCCATTCTCTCATGGACAGCCATCCACAAACATaGTCAAACCATGATCCATATATGACATTTCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LSHSLMDSHPQT*SNHDPYMTFPL Trigger: CAAAGGAAATGTCATATATGGATCATGGTTTGAGCATGTTTGTGGATGGCTGTCCATGAGAGAATGGGACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 72 bp | ATGTTGTTTTCTTTCATGGCTTGGAAGGAGCTGTACTaGAGGACGAGATCCAGCTCATCTGGTTCTAATTTT | + |
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Preference number: 6 (lower is better) Translates to: MLFSFMAWKELY*RTRSSSSGSNF Trigger: AAAATTAGAACCAGATGAGCTGGATCTCGTCCTCAAGTACAGCTCCTTCCAAGCCATGAAAGAAAACAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 90 bp | AATCTCCCTTGGTCTGAATCAAGCAGACAATCTCAATCAACCAGTTaGTTCCTGACTTGGGGTAAGTCAATATCAACAAGTCTTCTTCTT | + |
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Preference number: 6 (lower is better) Translates to: NLPWSESSRQSQSTS*FLTWGKSISTSLLL Trigger: AAGAAGAAGACTTGTTGATATTGACTTACCCCAAGTCAGGAACAAACTGGTTGATTGAGATTGTCTGCTTGATTCAGACCAAGGGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS TCA 72 bp | ATTTCCTTTGAGGAACCATTCAAAATAAGTTCTGAGTaGCCCTGGATTCTTCACAAGGTTTGTGTTACCCCA | + |
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Preference number: 6 (lower is better) Translates to: ISFEEPFKISSE*PWILHKVCVTP Trigger: TGGGGTAACACAAACCTTGTGAAGAATCCAGGGTCACTCAGAACTTATTTTGAATGGTTCCTCAAAGGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS CAA 72 bp | TTCCTAGGAAGTCACAGATCTTCTTTATGGTTCCCTTaGTATCCTTTTTCATGTCTTCATAGTACAGTACCA | + |
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Preference number: 6 (lower is better) Translates to: FLGSHRSSLWFP*YPFSCLHSTVP Trigger: TGGTACTGTACTATGAAGACATGAAAAAGGATACAAAGGGAACCATAAAGAAGATCTGTGACTTCCTAGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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| CDS TCA 72 bp | CCTATTACGAATATCTTCCAAAATTTCTCTTTGATATaGTATGGCAGGAAAAGGTATCCCTTCAAACCAAGT | + |
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Preference number: 6 (lower is better) Translates to: PITNIFQNFSLI*YGRKRYPFKPS Trigger: ACTTGGTTTGAAGGGATACCTTTTCCTGCCATATCATATCAAAGAGAAATTTTGGAAGATATTCGTAATAGG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108520.4 ENSMUST00000165167.8 |
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