Pregenerated sensors for SULT1C2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023122Ensembl transcript IDs: ENSMUST00000023886.7
Found 48 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GATTTCATACACTTTCATTTAGATGATCCCTTCTATTTGTATGCTTaGCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTATACCT | + |
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Preference number: 1 (lower is better) Translates to: DFIHFHLDDPFYLYA*PLGSYFRVRIEAIP Trigger: AGGTATAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGAAGGGATCATCTAAATGAAAGTGTATGAAATC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR-3UTR TCA 90 bp | GTTAGTAATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCATTCCTTTGGCTGGATTaGGGCTTGCAGACAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: VSNHRVRDTIFGLYSLLSFLWLD*GLQTDS Trigger: GGAGTCTGTCTGCAAGCCTCAATCCAGCCAAAGGAA...TGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATTACTAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTATACAGGGCTTCCTTTGGCTaGATTGAGGCTTGCAGACAG | + |
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Preference number: 2 (lower is better) Translates to: ICMLALWVVISELESRLYRASFG*IEACRQ Trigger: CTGTCTGCAAGCCTCAATCCAGCCAAAGGAAGCCCT...GTATAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR-3UTR GCA 90 bp | TCTATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTAGGCTGGATTGAGGCTTaGAGACAGACTCCTGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: SICMLALWVVISELESRLGWIEA*RQTPVL Trigger: AAGAACAGGAGTCTGTCTGCAAGCCTCAATCCAGCC...TAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR-3UTR CAA 90 bp | CCTTCTATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGTTTGGCCTTTACAGTTaGCTTTCAGGGCTTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: PSICMLALWVVISELESRFGLYS*LSGLPL Trigger: CAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAA...CCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGAAGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR GCA 72 bp | CACTTTCATTTAGATGATCCCTTCTATTTGTATGCTTaGCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAG | + |
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Preference number: 3 (lower is better) Translates to: HFHLDDPFYLYA*PLGSYFRVRIE Trigger: CTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGAAGGGATCATCTAAATGAAAGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | AGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTGCCAGGTGCCTGGCTCTaGGAGCACCTGGCTCATCCT | + |
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Preference number: 4 (lower is better) Translates to: RVRDTIFGLYSLLSGLPLPGAWL*EHLAHP Trigger: AGGATGAGCCAGGTGCTCCCAGAGCCAGGCACCTGG...CAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTCTCATCCCAGGTGCCTaGCTCTGGGAGCACCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QSQRHNLWPLQFAFRASFLIPGA*LWEHLA Trigger: AGCCAGGTGCTCCCAGAGCCAGGCACCTGGGATGAG...AAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR TCA 90 bp | AATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTGATGGTGGCAGCAGCTaGGTGGGAAGATGGGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: NHRVRDTIFGLYSLLSGLDGGSS*VGRWVL Trigger: AAGGACCCATCTTCCCACTCAGCTGCTGCCACCATC...AAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR CAA 72 bp | CTTTACAGTTTGCTTTCAGGGCTTCCTTTGGCTGGATaGAGGCTTGCAGACAGACTCCTGTTCTTGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: LYSLLSGLPLAG*RLADRLLFLVI Trigger: GATCACCAAGAACAGGAGTCTGTCTGCAAGCCTCAATCCAGCCAAAGGAAGCCCTGAAAGCAAACTGTAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR TCA 90 bp | AATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTTTGGCCTCGAAGGTCTaGATCTGCCTCCAGTTGTCC | + |
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Preference number: 4 (lower is better) Translates to: NHRVRDTIFGLYSLLSGLLASKV*ICLQLS Trigger: GGACAACTGGAGGCAGATTCAGACCTTCGAGGCCAA...AAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | AGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTGGTTTGTCCAGAAAGATaGTGGCAGCAGCTGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: RVRDTIFGLYSLLSGLPLVCPER*WQQLSG Trigger: CCCACTCAGCTGCTGCCACCATCTTTCTGGACAAAC...CAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR CAA 72 bp | CACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTaGCTTTCAGGGCTTCCTTTGGCTGGATTGAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: HRVRDTIFGLYS*LSGLPLAGLRL Trigger: AAGCCTCAATCCAGCCAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR GCA 90 bp | ATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTATACTGGTTGGGGTGGCCGTaGCCACTCAATAAAAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: ICMLALWVVISELESRLYWLGWP*PLNKRV Trigger: CACCCTTTTATTGAGTGGGCACGGCCACCCCAACCA...GTATAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | AATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTGAGCTGGCATCTCATTaGCTTTGTCCACACCTGATG | + |
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Preference number: 4 (lower is better) Translates to: NHRVRDTIFGLYSLLSGLELASH*LCPHLM Trigger: CATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTC...AAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTAAAGGGGAAATGGACTaGTCCAGGATAGATTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QSQRHNLWPLQFAFRASFKGEMD*SRIDLG Trigger: CCCCAAATCTATCCTGGACCAGTCCATTTCCCCTTT...AAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR GCA 90 bp | AATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTTCAGTTTGGTTTGTCTaGTCAGTTCTGGGGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: NHRVRDTIFGLYSLLSGLSVWFV*SVLGSR Trigger: CCTTGACCCCAGAACTGAGCAGACAAACCAAACTGA...AAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | GCCTTTATGAGTTGTAATGTGATGTTAGTAATCACAGAGTCAGAGACACAATCTAATGAGGAGGTCGTCTaGCTTGGCCTCGAAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AFMSCNVMLVITESETQSNEEVV*LGLEGL Trigger: CAGACCTTCGAGGCCAAGCCAGACGACCTCCTCATT...AGATTGTGTCTCTGACTCTGTGATTACTAACATCACATTACAACTCATAAAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CCA 90 bp | CAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTCTACCTCTTTCAGTTTaGTTTGTCTGCTCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: QSQRHNLWPLQFAFRASFLPLSV*FVCSVL Trigger: CAGAACTGAGCAGACAAACCAAACTGAAAGAGGTAG...AAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| 3UTR CAA 72 bp | GTGATGTTAGTAATCACAGAGTCAGAGACACAATCTTaGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: VMLVITESETQS*AFTVCFQGFLW Trigger: CCAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATTACTAACATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR GCA 90 bp | AGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTTGTTCTTGCCCATAAACTaGATCACCTTCTGGATTTCA | + |
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Preference number: 4 (lower is better) Translates to: RVRDTIFGLYSLLSGLPLFLPIN*ITFWIS Trigger: TGAAATCCAGAAGGTGATGCAGTTTATGGGCAAGAA...CAAAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR TCA 90 bp | ATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTATACCAGTTCCTTTTCTCATaGAAGGGGAAATGGACTGGT | + |
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Preference number: 4 (lower is better) Translates to: ICMLALWVVISELESRLYQFLFS*KGKWTG Trigger: ACCAGTCCATTTCCCCTTTCATGAGAAAAGGAACTG...GTATAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR TCA 90 bp | CCTTCTATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGAAGAGGAAGAGAATCTaGTATTTGTCTCGAATTTCC | + |
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Preference number: 4 (lower is better) Translates to: PSICMLALWVVISELESRKRKRI*YLSRIS Trigger: GGAAATTCGAGACAAATATCAGATTCTCTTCCTCTT...CCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGAAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR GCA 90 bp | GTTAGTAATCACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAAGTTCAGAGAGGTTCTaGCCATCTTTTGCTTATAGA | + |
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Preference number: 4 (lower is better) Translates to: VSNHRVRDTIFGLYSLLSSSERF*PSFAYR Trigger: TCTATAAGCAAAAGATGGGCAGAACCTCTCTGAACT...TGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGTGATTACTAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR TCA 90 bp | TCTATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTAAATCCATGTTGTCCCTaGTTTAGGGTAAGTACAAAT | + |
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Preference number: 4 (lower is better) Translates to: SICMLALWVVISELESRLNPCCP*FRVSTN Trigger: ATTTGTACTTACCCTAAATCAGGGACAACATGGATT...TAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR GCA 90 bp | GCCTTTATGAGTTGTAATGTGATGTTAGTAATCACAGAGTCAGAGACACAATCTTCTACATCACCATTCTaGTCAATCATGTCCACAATT | + |
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Preference number: 4 (lower is better) Translates to: AFMSCNVMLVITESETQSSTSPF*SIMSTI Trigger: AATTGTGGACATGATTGAGCAGAATGGTGATGTAGA...AGATTGTGTCTCTGACTCTGTGATTACTAACATCACATTACAACTCATAAAGGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 90 bp | TGGCTTGGCCTCGAAGGTCTGAATCTGCCTCCAGTTGTCCACAGTTaGAGCCTGCAGTGGGATCCCTGCTACCTCTTTCAGTTTGGTTTG | + |
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Preference number: 5 (lower is better) Translates to: WLGLEGLNLPPVVHS*SLQWDPCYLFQFGL Trigger: CAAACCAAACTGAAAGAGGTAGCAGGGATCCCACTGCAGGCTCCAACTGTGGACAACTGGAGGCAGATTCAGACCTTCGAGGCCAAGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 90 bp | GAGTGGGAAGATGGGTCCTTAATATCCTTGGAGCTGGCATCTCATTaGCTTTGTCCACACCTGATGGTTGGGGTGGCCGTGCCCACTCAA | + |
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Preference number: 5 (lower is better) Translates to: EWEDGSLISLELASH*LCPHLMVGVAVPTQ Trigger: TTGAGTGGGCACGGCCACCCCAACCATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTCCAAGGATATTAAGGACCCATCTTCCCACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS TCA 90 bp | GATGGTTGGGGTGGCCGTGCCCACTCAATAAAAGGGTGTCGGTGTTaGATGATGGTTCGCCGGCACTTCTCTACATCACCATTCTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: DGWGGRAHSIKGCRC*MMVRRHFSTSPFCS Trigger: TGAGCAGAATGGTGATGTAGAGAAGTGCCGGCGAACCATCATTCAACACCGACACCCTTTTATTGAGTGGGCACGGCCACCCCAACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS GCA 90 bp | AATCTGCCTCCAGTTGTCCACAGTTGGAGCCTGCAGTGGGATCCCTaGTACCTCTTTCAGTTTGGTTTGTCTGCTCAGTTCTGGGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: NLPPVVHSWSLQWDP*YLFQFGLSAQFWGQ Trigger: TTGACCCCAGAACTGAGCAGACAAACCAAACTGAAAGAGGTAGCAGGGATCCCACTGCAGGCTCCAACTGTGGACAACTGGAGGCAGATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CAA 90 bp | ATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGCTATACTCCAGTTGTCCACAGTaGGAGCCTGCAGTGGGATCC | + |
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Preference number: 5 (lower is better) Translates to: ICMLALWVVISELESRLYSSCPQ*EPAVGS Trigger: GGATCCCACTGCAGGCTCCAACTGTGGACAACTGGA...GTATAGCCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CAA 90 bp | ACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTGGGTCCTTAATATCCTaGGAGCTGGCATCTCATTGG | + |
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Preference number: 5 (lower is better) Translates to: TESETQSLAFTVCFQGFLGSLIS*ELASHW Trigger: CCAATGAGATGCCAGCTCCAAGGATATTAAGGACCC...AAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CAA 90 bp | ACAGAGTCAGAGACACAATCTTTGGCCTTTACAGTTTGCTTTCAGGGCTTCCTTCTCTTTCAGTTTGGTTaGTCTGCTCAGTTCTGGGGT | + |
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Preference number: 5 (lower is better) Translates to: TESETQSLAFTVCFQGFLLFQFG*SAQFWG Trigger: ACCCCAGAACTGAGCAGACAAACCAAACTGAAAGAG...AAGGAAGCCCTGAAAGCAAACTGTAAAGGCCAAAGATTGTGTCTCTGACTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS-3UTR CAA 90 bp | CCTTCTATTTGTATGCTTGCCCTTTGGGTAGTTATTTCAGAGTTAGAATCGAGGTGGTCCAGGATAGATTaGGGGGCCGTAGAACGATTT | + |
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Preference number: 5 (lower is better) Translates to: PSICMLALWVVISELESRWSRID*GAVERF Trigger: AAATCGTTCTACGGCCCCCAAATCTATCCTGGACCA...CCTCGATTCTAACTCTGAAATAACTACCCAAAGGGCAAGCATACAAATAGAAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS TCA 90 bp | GGCCGTAGAACGATTTGTCATAGGATTCTCTTTCATTTTCTCAAATaGTGTCTCCAGGACTATTTTATCCACCACATCTTCATCCAAATT | + |
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Preference number: 5 (lower is better) Translates to: GRRTICHRILFHFLK*CLQDYFIHHIFIQI Trigger: AATTTGGATGAAGATGTGGTGGATAAAATAGTCCTGGAGACATCATTTGAGAAAATGAAAGAGAATCCTATGACAAATCGTTCTACGGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS TCA 72 bp | CAAATGAGGAGGTCGTCTGGCTTGGCCTCGAAGGTCTaGATCTGCCTCCAGTTGTCCACAGTTGGAGCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QMRRSSGLASKV*ICLQLSTVGAC Trigger: GCAGGCTCCAACTGTGGACAACTGGAGGCAGATTCAGACCTTCGAGGCCAAGCCAGACGACCTCCTCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 72 bp | CTCGAAGGTCTGAATCTGCCTCCAGTTGTCCACAGTTaGAGCCTGCAGTGGGATCCCTGCTACCTCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: LEGLNLPPVVHS*SLQWDPCYLFQ Trigger: CTGAAAGAGGTAGCAGGGATCCCACTGCAGGCTCCAACTGTGGACAACTGGAGGCAGATTCAGACCTTCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 72 bp | GGGTGGCCGTGCCCACTCAATAAAAGGGTGTCGGTGTaGAATGATGGTTCGCCGGCACTTCTCTACATCACC | + |
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Preference number: 6 (lower is better) Translates to: GWPCPLNKRVSV*NDGSPALLYIT Trigger: GGTGATGTAGAGAAGTGCCGGCGAACCATCATTCAACACCGACACCCTTTTATTGAGTGGGCACGGCCACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 72 bp | GTCCTTAATATCCTTGGAGCTGGCATCTCATTGGCTTaGTCCACACCTGATGGTTGGGGTGGCCGTGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: VLNILGAGISLA*STPDGWGGRAH Trigger: GTGGGCACGGCCACCCCAACCATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTCCAAGGATATTAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS TCA 72 bp | GGTGGCCGTGCCCACTCAATAAAAGGGTGTCGGTGTTaGATGATGGTTCGCCGGCACTTCTCTACATCACCA | + |
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Preference number: 6 (lower is better) Translates to: GGRAHSIKGCRC*MMVRRHFSTSP Trigger: TGGTGATGTAGAGAAGTGCCGGCGAACCATCATTCAACACCGACACCCTTTTATTGAGTGGGCACGGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 72 bp | GATGGGTCCTTAATATCCTTGGAGCTGGCATCTCATTaGCTTTGTCCACACCTGATGGTTGGGGTGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: DGSLISLELASH*LCPHLMVGVAV Trigger: CACGGCCACCCCAACCATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTCCAAGGATATTAAGGACCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 72 bp | AGATGGGTCCTTAATATCCTTGGAGCTGGCATCTCATaGGCTTTGTCCACACCTGATGGTTGGGGTGGCCGT | + |
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Preference number: 6 (lower is better) Translates to: RWVLNILGAGIS*ALSTPDGWGGR Trigger: ACGGCCACCCCAACCATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTCCAAGGATATTAAGGACCCATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 90 bp | GGAAGATGGGTCCTTAATATCCTTGGAGCTGGCATCTCATTGGCTTaGTCCACACCTGATGGTTGGGGTGGCCGTGCCCACTCAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: GRWVLNILGAGISLA*STPDGWGGRAHSIK Trigger: TTTTATTGAGTGGGCACGGCCACCCCAACCATCAGGTGTGGACAAAGCCAATGAGATGCCAGCTCCAAGGATATTAAGGACCCATCTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 72 bp | AGTTGTTTGTCCAGAAAGATGGTGGCAGCAGCTGAGTaGGAAGATGGGTCCTTAATATCCTTGGAGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: SCLSRKMVAAAE*EDGSLISLELA Trigger: TGCCAGCTCCAAGGATATTAAGGACCCATCTTCCCACTCAGCTGCTGCCACCATCTTTCTGGACAAACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CCA 72 bp | ATTGATGAAGGTTTCAAAATACTCATCCCAGGTGCCTaGCTCTGGGAGCACCTGGCTCATCCTGTAGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: IDEGFKILIPGA*LWEHLAHPVEV Trigger: CACTTCTACAGGATGAGCCAGGTGCTCCCAGAGCCAGGCACCTGGGATGAGTATTTTGAAACCTTCATCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 72 bp | CTCATGAAAGGGGAAATGGACTGGTCCAGGATAGATTaGGGGGCCGTAGAACGATTTGTCATAGGATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: LMKGEMDWSRID*GAVERFVIGFS Trigger: AGAGAATCCTATGACAAATCGTTCTACGGCCCCCAAATCTATCCTGGACCAGTCCATTTCCCCTTTCATGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS CAA 72 bp | AGGACTATTTTATCCACCACATCTTCATCCAAATTCTaGCCCATAAACTGCATCACCTTCTGGATTTCATGC | + |
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Preference number: 6 (lower is better) Translates to: RTILSTTSSSKF*PINCITFWISC Trigger: GCATGAAATCCAGAAGGTGATGCAGTTTATGGGCAAGAATTTGGATGAAGATGTGGTGGATAAAATAGTCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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| CDS TCA 72 bp | ACGATTTGTCATAGGATTCTCTTTCATTTTCTCAAATaGTGTCTCCAGGACTATTTTATCCACCACATCTTC | + |
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Preference number: 6 (lower is better) Translates to: TICHRILFHFLK*CLQDYFIHHIF Trigger: GAAGATGTGGTGGATAAAATAGTCCTGGAGACATCATTTGAGAAAATGAAAGAGAATCCTATGACAAATCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023886.7 |
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