Pregenerated sensors for SULT1B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029269Ensembl transcript IDs: ENSMUST00000031199.11, ENSMUST00000117455.8, ENSMUST00000120150.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGTCAGATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATaGAGACCATTTGCAACCTTGCAAACTGTTTTAATAGTGAAGGAA | + |
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Preference number: 1 (lower is better) Translates to: PGSDIQEREPNKCRK*RPFATLQTVLIVKE Trigger: TTCCTTCACTATTAAAACAGTTTGCAAGGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATCTGACCCAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR TCA 90 bp | CTCGCTTTAGTTTGGAGACAGTTTGAGATACAATTTTACATAGGTTaGTATTACCTACAGGCAGGAAACCTTTTCACACAAAGAGTTATA | + |
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Preference number: 1 (lower is better) Translates to: LALVWRQFEIQFYIG*YYLQAGNLFTQRVI Trigger: TATAACTCTTTGTGTGAAAAGGTTTCCTGCCTGTAGGTAATATCAACCTATGTAAAATTGTATCTCAAACTGTCTCCAAACTAAAGCGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR GCA 90 bp | GATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATGCAGACCATTTGCAACCATTTGGAAGATTACCTaGTGGGGAATGTGTAGTATG | + |
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Preference number: 2 (lower is better) Translates to: DIQEREPNKCRKCRPFATIWKIT*WGMCSM Trigger: CATACTACACATTCCCCAGCAGGTAATCTTCCAAAT...GGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGGGAGCATAGTGTCCTaGGTCAGATATCCAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFGSIVS*VRYPGE Trigger: CTCTCCTGGATATCTGACCCAGGACACTATGCTCCC...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR TCA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTGTGAATTTCCGAATTTaGGGCCAGCCTGGTCTACAC | + |
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Preference number: 2 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVVNFRI*GQPGLH Trigger: GTGTAGACCAGGCTGGCCTCAAATTCGGAAATTCAC...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCACTAAGTACTACTACATaGGAGACACAGTGGAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: SEISSQLKGKVLNKIMWPLSTTT*ETQWKV Trigger: TACTTTCCACTGTGTCTCCCATGTAGTAGTACTTAG...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR GCA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTATTTGGAAGATTACCTaGTGGGGAATGTGTAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVIWKIT*WGMCSM Trigger: CATACTACACATTCCCCAGCAGGTAATCTTCCAAAT...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CCA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTCAACTCGCTTTAGTTTaGAGACAGTTTGAGATACAA | + |
|
Preference number: 2 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVQLALV*RQFEIQ Trigger: TTGTATCTCAAACTGTCTCCAAACTAAAGCGAGTTG...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR CCA 72 bp | CAGGTGATGGTGGCATATGCCTTTAAACCCAGCACTTaGGAGGTAGAGGTAGGTGAATTTCCGAATTTGAGG | + |
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Preference number: 3 (lower is better) Translates to: QVMVAYAFKPST*EVEVGEFPNLR Trigger: CCTCAAATTCGGAAATTCACCTACCTCTACCTCCCAAGTGCTGGGTTTAAAGGCATATGCCACCATCACCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CAA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTGGTGAATTTCCGAATTaGAGGCCAGCCTGGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVGEFPN*RPAWST Trigger: TGTAGACCAGGCTGGCCTCAAATTCGGAAATTCACC...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR TCA 72 bp | CAGCCTGGTCTACACTATTTCCAAGTCTCAGCTACTTaGTCTGACACATGGAATAATATTACTGAAGAACCA | + |
|
Preference number: 3 (lower is better) Translates to: QPGLHYFQVSAT*SDTWNNITEEP Trigger: TGGTTCTTCAGTAATATTATTCCATGTGTCAGATCAAGTAGCTGAGACTTGGAAATAGTGTAGACCAGGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR GCA 72 bp | GATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATaGAGACCATTTGCAACCTTGCAAACTGTTTTAATA | + |
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Preference number: 3 (lower is better) Translates to: DIQEREPNKCRK*RPFATLQTVLI Trigger: TATTAAAACAGTTTGCAAGGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CAA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTAGACCATTTGCAACCTaGCAAACTGTTTTAATAGTG | + |
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Preference number: 3 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVRPFAT*QTVLIV Trigger: CACTATTAAAACAGTTTGCAAGGTTGCAAATGGTCT...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR-3UTR CAA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTACAATTTTACATAGGTaGATATTACCTACAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFTILHR*ILPTGR Trigger: CCTGCCTGTAGGTAATATCAACCTATGTAAAATTGT...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR TCA 72 bp | GTTTGGAGACAGTTTGAGATACAATTTTACATAGGTTaGTATTACCTACAGGCAGGAAACCTTTTCACACAA | + |
|
Preference number: 3 (lower is better) Translates to: VWRQFEIQFYIG*YYLQAGNLFTQ Trigger: TTGTGTGAAAAGGTTTCCTGCCTGTAGGTAATATCAACCTATGTAAAATTGTATCTCAAACTGTCTCCAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR CAA 72 bp | AGCACTTGGGAGGTAGAGGTAGGTGAATTTCCGAATTaGAGGCCAGCCTGGTCTACACTATTTCCAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: STWEVEVGEFPN*RPAWSTLFPSL Trigger: GAGACTTGGAAATAGTGTAGACCAGGCTGGCCTCAAATTCGGAAATTCACCTACCTCTACCTCCCAAGTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR GCA 90 bp | GATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATGCAGACCATTTGCAACCGCTGTGGTCCATCATTaGTGTGGGCAGATGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: DIQEREPNKCRKCRPFATAVVHH*CGQMGV Trigger: TACACCCATCTGCCCACAGCAATGATGGACCACAGC...GGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | ACAGAACAGCATGAAAACCTTGAGATAGCCAGGGAGCATAGTGTCCTGGGTCAGAGCTGGCTATCTTCTTaGTTTCTTTCTTTGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQHENLEIAREHSVLGQSWLSS*FLSLGS Trigger: AGAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCT...CTGACCCAGGACACTATGCTCCCTGGCTATCTCAAGGTTTTCATGCTGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CCA 90 bp | CTTGGCTCTAGATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTAAAGGGGACTTGCTGTaGTCCATCATTGCTGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSRSFGRLPAGECVVCFKGDLL*SIIAVG Trigger: GCCCACAGCAATGATGGACCACAGCAAGTCCCCTTT...AAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGATCTAGAGCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCAGCAGATGGGTGTAATTaGCCAGGGGGTTTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SEISSQLKGKVLNKIMWPADGCN*PGGFPS Trigger: TGAAGGAAAACCCCCTGGTCAATTACACCCATCTGC...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | GATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATGCAGACCATTTGCAACCCAGTTTGGGTCATTGTaGAGTAATTTTTCCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DIQEREPNKCRKCRPFATQFGSL*SNFSSP Trigger: GGGACTGGAAAAATTACTTCACAATGACCCAAACTG...GGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR GCA 90 bp | CTTGGCTCTAGATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATGTCACCTGGTGTaGTCTGGAACTCTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: LGSRSFGRLPAGECVVCFQCHLV*SGTLQS Trigger: GGATTGAAGAGTTCCAGAGCACACCAGGTGACATTG...AAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGATCTAGAGCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR GCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGAGCTGTGGTCCATCATTaGTGTGGGCAGATGGGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRAVVHH*CGQMGV Trigger: TACACCCATCTGCCCACAGCAATGATGGACCACAGC...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CCA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTAAAGGGGACTTGCTGTaGTCCATCATTGCTGTGGGC | + |
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Preference number: 4 (lower is better) Translates to: IIWKITCWGMCSMFSISIKGDLL*SIIAVG Trigger: GCCCACAGCAATGATGGACCACAGCAAGTCCCCTTT...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGCAGATGGGTGTAATTaGCCAGGGGGTTTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFADGCN*PGGFPS Trigger: TGAAGGAAAACCCCCTGGTCAATTACACCCATCTGC...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGAGCAGATGGGTGTAATTaGCCAGGGGGTTTTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRADGCN*PGGFPS Trigger: TGAAGGAAAACCCCCTGGTCAATTACACCCATCTGC...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | CTTGGCTCTAGATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAGTTTGGGTCATTGTaGAGTAATTTTTCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: LGSRSFGRLPAGECVVCFQFGSL*SNFSSP Trigger: GGGACTGGAAAAATTACTTCACAATGACCCAAACTG...AAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGATCTAGAGCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCACAGTTTGGGTCATTGTaGAGTAATTTTTCCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SEISSQLKGKVLNKIMWPQFGSL*SNFSSP Trigger: GGGACTGGAAAAATTACTTCACAATGACCCAAACTG...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR GCA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTCAATGTCACCTGGTGTaGTCTGGAACTCTTCAATCC | + |
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Preference number: 4 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVQCHLV*SGTLQS Trigger: GGATTGAAGAGTTCCAGAGCACACCAGGTGACATTG...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCACTTTATTATCCGAGGTaGTGGAGTTTTCTTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: SEISSQLKGKVLNKIMWPLYYPR*WSFLQE Trigger: CTCTTGAAGAAAACTCCATCACCTCGGATAATAAAG...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGACAATACCTTTTCTCATaGAAGGGGACTTGCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRQYLFS*KGTCCG Trigger: ACCACAGCAAGTCCCCTTTCATGAGAAAAGGTATTG...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTCAATACCTTTTCTCATaGAAGGGGACTTGCTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFQYLFS*KGTCCG Trigger: ACCACAGCAAGTCCCCTTTCATGAGAAAAGGTATTG...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CCA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCAACTCAGTTCCAACATTaGAACTTTGGAGGTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: SEISSQLKGKVLNKIMWPTQFQH*NFGGDN Trigger: GTTATCACCTCCAAAGTTCCAATGTTGGAACTGAGT...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGAAACATGATCAAACCATaGACCATAGGCCACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRNMIKP*TIGHIS Trigger: GGAAATGTGGCCTATGGTTCATGGTTTGATCATGTT...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTAACATGATCAAACCATaGACCATAGGCCACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFNMIKP*TIGHIS Trigger: GGAAATGTGGCCTATGGTTCATGGTTTGATCATGTT...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTAACATGATCAAACCATaGACCATAGGCCACATTTCC | + |
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Preference number: 4 (lower is better) Translates to: SFGRLPAGECVVCFQLAFNMIKP*TIGHIS Trigger: GGAAATGTGGCCTATGGTTCATGGTTTGATCATGTT...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR GCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGACAAGGTAAATCATCTTaGACTTGTTCTCCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRQGKSS*TCSPRR Trigger: CCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTG...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR GCA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTCAAGGTAAATCATCTTaGACTTGTTCTCCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFQGKSS*TCSPRR Trigger: CCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTG...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR GCA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTCAAGGTAAATCATCTTaGACTTGTTCTCCCAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: IIWKITCWGMCSMFSISIQGKSS*TCSPRR Trigger: CCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTG...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTCAAGAGTTCAACACCTaGTATTCTTATTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVQEFNT*YSYSRN Trigger: GTTCCTGGAATAAGAATATCAGGTGTTGAACTCTTG...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR TCA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTCAAGAGTTCAACACCTaGTATTCTTATTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: SFGRLPAGECVVCFQLAFQEFNT*YSYSRN Trigger: GTTCCTGGAATAAGAATATCAGGTGTTGAACTCTTG...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGACAAGAGTTCAACACCTaGTATTCTTATTCCAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRQEFNT*YSYSRN Trigger: GTTCCTGGAATAAGAATATCAGGTGTTGAACTCTTG...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTCTTTATTATCCGAGGTaGTGGAGTTTTCTTCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: IIWKITCWGMCSMFSISILYYPR*WSFLQE Trigger: CTCTTGAAGAAAACTCCATCACCTCGGATAATAAAG...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTAGCTGGCTATCTTCTTaGTTTCTTTCTTTGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: SFGRLPAGECVVCFQLAFSWLSS*FLSLGS Trigger: AGAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCT...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR TCA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTAGCTGGCTATCTTCTTaGTTTCTTTCTTTGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: IIWKITCWGMCSMFSISISWLSS*FLSLGS Trigger: AGAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCT...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CCA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTACTCAGTTCCAACATTaGAACTTTGGAGGTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: SFGRLPAGECVVCFQLAFTQFQH*NFGGDN Trigger: GTTATCACCTCCAAAGTTCCAATGTTGGAACTGAGT...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CCA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGAACTCAGTTCCAACATTaGAACTTTGGAGGTGATAAC | + |
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Preference number: 4 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRTQFQH*NFGGDN Trigger: GTTATCACCTCCAAAGTTCCAATGTTGGAACTGAGT...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| 3UTR CAA 72 bp | TCTAAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTaGTACTGGATGACTTTCTTTGAAGTTGAAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: SKQRCVFSVSLH*YWMTFFEVETR Trigger: CCTTGTTTCAACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTTAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| 3UTR CAA 72 bp | TATCTCTCTAAGCAAAGATGTGTATTTTCTGTGAGTTaGCACTTGTACTGGATGACTTTCTTTGAAGTTGAA | + |
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Preference number: 4 (lower is better) Translates to: YLSKQRCVFSVS*HLYWMTFFEVE Trigger: TTCAACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTTAGAGAGATA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS GCA 90 bp | GTCACCTGGTGTGCTCTGGAACTCTTCAATCCTTTCCCAATTGAGTaGAAAAGCATAGATCATGGGGTAGCCATGGATCATCTTCAGATC | + |
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Preference number: 5 (lower is better) Translates to: VTWCALELFNPFPIE*KSIDHGVAMDHLQI Trigger: GATCTGAAGATGATCCATGGCTACCCCATGATCTATGCTTTTGCACTCAATTGGGAAAGGATTGAAGAGTTCCAGAGCACACCAGGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS TCA 90 bp | CAATGTCACCTGGTGTGCTCTGGAACTCTTCAATCCTTTCCCAATTaGGTGCAAAAGCATAGATCATGGGGTAGCCATGGATCATCTTCA | + |
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Preference number: 5 (lower is better) Translates to: QCHLVCSGTLQSFPN*VQKHRSWGSHGSSS Trigger: TGAAGATGATCCATGGCTACCCCATGATCTATGCTTTTGCACTCAATTGGGAAAGGATTGAAGAGTTCCAGAGCACACCAGGTGACATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | ACAGAACAGCATGAAAACCTTGAGATAGCCAGGGAGCATAGTGTCCTGGGTCAGATAGACAGCATCAAATaGCTCAGTTTGGGTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: TEQHENLEIAREHSVLGQIDSIK*LSLGHC Trigger: ACAATGACCCAAACTGAGCAATTTGATGCTGTCTAT...CTGACCCAGGACACTATGCTCCCTGGCTATCTCAAGGTTTTCATGCTGTTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CAA 90 bp | GATATCCAGGAGAGGGAACCTAACAAGTGTAGAAAATGCAGACCATTTGCAACCTGCAGAACTCAAGTGTaGTTCCAGACATCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: DIQEREPNKCRKCRPFATCRTQV*FQTSSS Trigger: AGAAGAAGATGTCTGGAACAACACTTGAGTTCTGCA...GGTTGCAAATGGTCTGCATTTTCTACACTTGTTAGGTTCCCTCTCCTGGATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CAA 90 bp | CTTGGCTCTAGATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTTCCAACATTGGAACTTaGGAGGTGATAACATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: LGSRSFGRLPAGECVVCFSNIGT*EVITSL Trigger: GAGAGATGTTATCACCTCCAAAGTTCCAATGTTGGA...AAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGATCTAGAGCCAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | TCAGAGATAAGCTCACAGCTCAAGGGAAAAGTTCTAAACAAAATAATGTGGCCATCCAACATTGGAACTTaGGAGGTGATAACATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: SEISSQLKGKVLNKIMWPSNIGT*EVITSL Trigger: GAGAGATGTTATCACCTCCAAAGTTCCAATGTTGGA...TGGCCACATTATTTTGTTTAGAACTTTTCCCTTGAGCTGTGAGCTTATCTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS GCA 90 bp | TACTATTCATCAGATCAAAATGATAATAGGAGACAGCAACATCCTTaGCATTTCGAGCAAGGTAAATCATCTTGCACTTGTTCTCCCAGA | + |
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Preference number: 5 (lower is better) Translates to: YYSSDQNDNRRQQHP*HFEQGKSSCTCSPR Trigger: TCTGGGAGAACAAGTGCAAGATGATTTACCTTGCTCGAAATGGCAAGGATGTTGCTGTCTCCTATTATCATTTTGATCTGATGAATAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | CTTGGCTCTAGATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTTTGGGAGTAGATCGATaGGAAGATGTGTCTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: LGSRSFGRLPAGECVVCFLGVDR*EDVSLL Trigger: TAATAAAGACACATCTTCCAATCGATCTACTCCCAA...AAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGATCTAGAGCCAAG 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS TCA 90 bp | AGGCCTCTTCATCCAAGGTCTTGTCTAGAAAGCTGGCTATCTTCTTaGTTTCTTTCTTTGGGTTCTGTTTCAATTCTTCATAGTATAAGT | + |
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Preference number: 5 (lower is better) Translates to: RPLHPRSCLESWLSS*FLSLGSVSILHSIS Trigger: ACTTATACTATGAAGAATTGAAACAGAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCTTTCTAGACAAGACCTTGGATGAAGAGGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTTCCAACATTGGAACTTaGGAGGTGATAACATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFSNIGT*EVITSL Trigger: GAGAGATGTTATCACCTCCAAAGTTCCAATGTTGGA...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CAA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTTGCAGAACTCAAGTGTaGTTCCAGACATCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SFGRLPAGECVVCFQLAFCRTQV*FQTSSS Trigger: AGAAGAAGATGTCTGGAACAACACTTGAGTTCTGCA...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGATGCAGAACTCAAGTGTaGTTCCAGACATCTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRCRTQV*FQTSSS Trigger: AGAAGAAGATGTCTGGAACAACACTTGAGTTCTGCA...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | TATCCTTTGAAAACTAAGGTAACAAAAGACCTTGGCTCTAGATCATTTGGAAGAAAGCTGGCTATCTTCTaGATTTCTTTCTTTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: YPLKTKVTKDLGSRSFGRKLAIF*ISFFGF Trigger: GAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCTT...TCTTCCAAATGATCTAGAGCCAAGGTCTTTTGTTACCTTAGTTTTCAAAGGATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | TCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTTAAGCTGGCTATCTTCTaGATTTCTTTCTTTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: SFGRLPAGECVVCFQLAFKLAIF*ISFFGF Trigger: GAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCTT...AAATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTAAGCTGGCTATCTTCTaGATTTCTTTCTTTGGGTTC | + |
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Preference number: 5 (lower is better) Translates to: IIWKITCWGMCSMFSISIKLAIF*ISFFGF Trigger: GAACCCAAAGAAAGAAATCAAGAAGATAGCCAGCTT...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | AAGCAAAGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTATAGACAGCATCAAATaGCTCAGTTTGGGTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: KQRCVFSVSLHLYWMTFFIDSIK*LSLGHC Trigger: ACAATGACCCAAACTGAGCAATTTGATGCTGTCTAT...AAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCTTTGCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS-3UTR CAA 90 bp | ATCATTTGGAAGATTACCTGCTGGGGAATGTGTAGTATGTTTTCAATTAGCATTATAGACAGCATCAAATaGCTCAGTTTGGGTCATTGT | + |
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Preference number: 5 (lower is better) Translates to: IIWKITCWGMCSMFSISIIDSIK*LSLGHC Trigger: ACAATGACCCAAACTGAGCAATTTGATGCTGTCTAT...AATGCTAATTGAAAACATACTACACATTCCCCAGCAGGTAATCTTCCAAATGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS-3UTR CAA 90 bp | AGATGTGTATTTTCTGTGAGTTTGCACTTGTACTGGATGACTTTCTTTGAAGTTTTGGGAGTAGATCGATaGGAAGATGTGTCTTTATTA | + |
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Preference number: 5 (lower is better) Translates to: RCVFSVSLHLYWMTFFEVLGVDR*EDVSLL Trigger: TAATAAAGACACATCTTCCAATCGATCTACTCCCAA...AACTTCAAAGAAAGTCATCCAGTACAAGTGCAAACTCACAGAAAATACACATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 |
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| CDS TCA 72 bp | ACCAGGGGGTTTTCCTTCATCATTTCAAAGGAGGTGTaGTGGACGATCCTGTCCAAGGCCTCTTCATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TRGFSFIISKEV*WTILSKASSSK Trigger: CTTGGATGAAGAGGCCTTGGACAGGATCGTCCATCACACCTCCTTTGAAATGATGAAGGAAAACCCCCTGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS TCA 72 bp | CTGGTGTGCTCTGGAACTCTTCAATCCTTTCCCAATTaGGTGCAAAAGCATAGATCATGGGGTAGCCATGGA | + |
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Preference number: 6 (lower is better) Translates to: LVCSGTLQSFPN*VQKHRSWGSHG Trigger: TCCATGGCTACCCCATGATCTATGCTTTTGCACTCAATTGGGAAAGGATTGAAGAGTTCCAGAGCACACCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS GCA 72 bp | TGTGCTCTGGAACTCTTCAATCCTTTCCCAATTGAGTaGAAAAGCATAGATCATGGGGTAGCCATGGATCAT | + |
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Preference number: 6 (lower is better) Translates to: CALELFNPFPIE*KSIDHGVAMDH Trigger: ATGATCCATGGCTACCCCATGATCTATGCTTTTGCACTCAATTGGGAAAGGATTGAAGAGTTCCAGAGCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS GCA 72 bp | CAACATCCTTGCCATTTCGAGCAAGGTAAATCATCTTaGACTTGTTCTCCCAGAAGGATTTTGGGAGTAGAT | + |
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Preference number: 6 (lower is better) Translates to: QHPCHFEQGKSS*TCSPRRILGVD Trigger: ATCTACTCCCAAAATCCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTGCTCGAAATGGCAAGGATGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS CAA 72 bp | ACTTGTTCTCCCAGAAGGATTTTGGGAGTAGATCGATaGGAAGATGTGTCTTTATTATCCGAGGTGATGGAG | + |
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Preference number: 6 (lower is better) Translates to: TCSPRRILGVDR*EDVSLLSEVME Trigger: CTCCATCACCTCGGATAATAAAGACACATCTTCCAATCGATCTACTCCCAAAATCCTTCTGGGAGAACAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS CAA 90 bp | TTCGAGCAAGGTAAATCATCTTGCACTTGTTCTCCCAGAAGGATTTaGGGAGTAGATCGATTGGAAGATGTGTCTTTATTATCCGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: FEQGKSSCTCSPRRI*GVDRLEDVSLLSEV Trigger: CACCTCGGATAATAAAGACACATCTTCCAATCGATCTACTCCCAAAATCCTTCTGGGAGAACAAGTGCAAGATGATTTACCTTGCTCGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS TCA 72 bp | AACCATGTCTACAATCTCACTAAGCCAAGTAGTACCTaGTTTAGGGTAAGTGGTTATTACAATGTCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: NHVYNLTKPSST*FRVSGYYNVTW Trigger: CCAGGTGACATTGTAATAACCACTTACCCTAAATCAGGTACTACTTGGCTTAGTGAGATTGTAGACATGGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS GCA 72 bp | TCAGATCAAAATGATAATAGGAGACAGCAACATCCTTaGCATTTCGAGCAAGGTAAATCATCTTGCACTTGT | + |
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Preference number: 6 (lower is better) Translates to: SDQNDNRRQQHP*HFEQGKSSCTC Trigger: ACAAGTGCAAGATGATTTACCTTGCTCGAAATGGCAAGGATGTTGCTGTCTCCTATTATCATTTTGATCTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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| CDS CAA 72 bp | GGTAAATCATCTTGCACTTGTTCTCCCAGAAGGATTTaGGGAGTAGATCGATTGGAAGATGTGTCTTTATTA | + |
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Preference number: 6 (lower is better) Translates to: GKSSCTCSPRRI*GVDRLEDVSLL Trigger: TAATAAAGACACATCTTCCAATCGATCTACTCCCAAAATCCTTCTGGGAGAACAAGTGCAAGATGATTTACC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031199.11 ENSMUST00000117455.8 ENSMUST00000120150.2 |
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