Pregenerated sensors for SUGT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022024Ensembl transcript IDs: ENSMUST00000054908.10
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAGGGGGAGGAGGAAGCGCGCATCCGAGGTGGGAATTCCAGCCCTaGGGAGGTAGAAGCAGGAAGGACAGAAGTCCAAGGAAAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: RGGGGSAHPRWEFQP*GGRSRKDRSPRKTL Trigger: CAGGGTTTTCCTTGGACTTCTGTCCTTCCTGCTTCTACCTCCCCAGGGCTGGAATTCCCACCTCGGATGCGCGCTTCCTCCTCCCCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 90 bp | TGTACTGTTTATGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTaGCCCCTGGAACTGGAGCTACAGGTGGTTGTTAACCATCACGGA | + |
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Preference number: 1 (lower is better) Translates to: CTVYVPGAQGGLSGM*PLELELQVVVNHHG Trigger: TCCGTGATGGTTAACAACCACCTGTAGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACATAAACAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | CAACAAATTCAGGAGCTGGAGACATGGCTCAGGAGTGAAGAGCACTaGTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACAT | + |
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Preference number: 1 (lower is better) Translates to: QQIQELETWLRSEEH*YPCRGSRFSLQHPH Trigger: ATGTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTGAATTTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | CTAAAGGAGAGGAAGAGAGACCAAGCTCAGACTAGCAGCATACATTaGACTAAGCGCTACCTCCAGCATCAAACCTGTTCACCTCTGCCA | + |
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Preference number: 1 (lower is better) Translates to: LKERKRDQAQTSSIH*TKRYLQHQTCSPLP Trigger: TGGCAGAGGTGAACAGGTTTGATGCTGGAGGTAGCGCTTAGTGCAATGTATGCTGCTAGTCTGAGCTTGGTCTCTCTTCCTCTCCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 90 bp | GCTTGTAAGCTTCCATTATCTGAGACAGAGAAACAAGCAGGCCTCTaGATGTGCACTTTTGGGCAAGTCTGGCCCATTTCTCCAAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ACKLPLSETEKQAGL*MCTFGQVWPISPSS Trigger: GGAGCTTGGAGAAATGGGCCAGACTTGCCCAAAAGTGCACATTCAGAGGCCTGCTTGTTTCTCTGTCTCAGATAATGGAAGCTTACAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 90 bp | AACGAGAGAACCTATATCAAACAACAAATTCAGGAGCTGGAGACATaGCTCAGGAGTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGG | + |
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Preference number: 1 (lower is better) Translates to: NERTYIKQQIQELET*LRSEEHCYPCRGSR Trigger: CCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTGAATTTGTTGTTTGATATAGGTTCTCTCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTaGCAGTTTATCTTGCCAGTCTCTGTGTGCACAGCTGAACATCTC | + |
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Preference number: 1 (lower is better) Translates to: PVHLCQCSGYINQML*QFILPVSVCTAEHL Trigger: GAGATGTTCAGCTGTGCACACAGAGACTGGCAAGATAAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 90 bp | AGGACTACAACGAGAGAACCTATATCAAACAACAAATTCAGGAGCTaGAGACATGGCTCAGGAGTGAAGAGCACTGCTACCCTTGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: RTTTREPISNNKFRS*RHGSGVKSTATLAE Trigger: CTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTGAATTTGTTGTTTGATATAGGTTCTCTCGTTGTAGTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 90 bp | TATAGAATCTATGGGCCTCGTTTTCTGGATTTGTTCCAGTGCATATaGCAAAAACGTCAGGCAATCACCAGCTCTAGGATGTGCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: YRIYGPRFLDLFQCI*QKRQAITSSRMCQA Trigger: AGCCTGGCACATCCTAGAGCTGGTGATTGCCTGACGTTTTTGCCATATGCACTGGAACAAATCCAGAAAACGAGGCCCATAGATTCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 90 bp | GCAGCCTTCACAGAGAAATGCACAGCTCTCATTCCAAAGCAGCTCTaGAAAGTAAACACAACACTGAAGCTGAAAACGTTAGACCCACCA | + |
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Preference number: 1 (lower is better) Translates to: AAFTEKCTALIPKQL*KVNTTLKLKTLDPP Trigger: TGGTGGGTCTAACGTTTTCAGCTTCAGTGTTGTGTTTACTTTTCAGAGCTGCTTTGGAATGAGAGCTGTGCATTTCTCTGTGAAGGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | TACATTGCACTAAGCGCTACCTCCAGCATCAAACCTGTTCACCTCTaGCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTATC | + |
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Preference number: 1 (lower is better) Translates to: YIALSATSSIKPVHL*QCSGYINQMLCQFI Trigger: GATAAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGGTTTGATGCTGGAGGTAGCGCTTAGTGCAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 90 bp | CTCCATTTAAGTACTGAAACCACAGTAATGGTGGCAGAGGAGGCCTaGCATTCTCTTGGTCTCCAACTCAGATTACTTATTGACAGTTAC | + |
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Preference number: 1 (lower is better) Translates to: LHLSTETTVMVAEEA*HSLGLQLRLLIDSY Trigger: GTAACTGTCAATAAGTAATCTGAGTTGGAGACCAAGAGAATGCCAGGCCTCCTCTGCCACCATTACTGTGGTTTCAGTACTTAAATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 90 bp | AGTTTGCAGCTTTACGTGGGCAAAAGGTCAGTTAGAACTTCAGCATaGACACCACCAACAAAAAGATTAAGCCAAACATGGTGGTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: SLQLYVGKRSVRTSA*TPPTKRLSQTWWCE Trigger: TTCACACCACCATGTTTGGCTTAATCTTTTTGTTGGTGGTGTCCATGCTGAAGTTCTAACTGACCTTTTGCCCACGTAAAGCTGCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | AATGTGCACTTTTGGGCAAGTCTGGCCCATTTCTCCAAGCTCCTTTaGCGGATAACTCTAATGTGCTTAGGCACATTTTATAATGCTTTT | + |
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Preference number: 1 (lower is better) Translates to: NVHFWASLAHFSKLL*RITLMCLGTFYNAF Trigger: AAAAGCATTATAAAATGTGCCTAAGCACATTAGAGTTATCCGGCAAAGGAGCTTGGAGAAATGGGCCAGACTTGCCCAAAAGTGCACATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 90 bp | GCCAACCTTAGCAGGAAACATTTTACATGCATGGAGTGTTGGTTATaGAGGAAAGCTGAAGTCCTCTTAAATGGTATTTTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: ANLSRKHFTCMECWL*RKAEVLLNGILCVC Trigger: ACACACACACAAAATACCATTTAAGAGGACTTCAGCTTTCCTTCATAACCAACACTCCATGCATGTAAAATGTTTCCTGCTAAGGTTGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 90 bp | AACATTCAGCCATTCCTAAGTTTTCCTGAATGTCAGCCTTCTCTCTaGTATACTATACACTCTGAAACTAAGGGCATCTCTCTCCATTTA | + |
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Preference number: 1 (lower is better) Translates to: NIQPFLSFPECQPSL*YTIHSETKGISLHL Trigger: TAAATGGAGAGAGATGCCCTTAGTTTCAGAGTGTATAGTATAGCAGAGAGAAGGCTGACATTCAGGAAAACTTAGGAATGGCTGAATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 90 bp | CCGCCACTAGGCTATACAAAGGCTGATAAAATGATGTCAAATCTGTaGGTTGCCAGTGGAATATGCATTATTATAGACTGCAAAGAATTC | + |
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Preference number: 1 (lower is better) Translates to: PPLGYTKADKMMSNL*VASGICIIIDCKEF Trigger: GAATTCTTTGCAGTCTATAATAATGCATATTCCACTGGCAACTCACAGATTTGACATCATTTTATCAGCCTTTGTATAGCCTAGTGGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTGCCAAATCCTCGGTATaGTGCCTGGCCCCTGTAGCA | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGAAKSSV*CLAPVA Trigger: TGCTACAGGGGCCAGGCAGCATACCGAGGATTTGGC...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTCTGGATTTGTTCCAGTaGATATGGCAAAAACGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGALDLFQ*IWQKRQ Trigger: CTGACGTTTTTGCCATATGCACTGGAACAAATCCAG...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTATGGGCCTCGTTTTCTaGATTTGTTCCAGTGCATAT | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGAMGLVF*ICSSAY Trigger: ATATGCACTGGAACAAATCCAGAAAACGAGGCCCAT...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTTTATTTAGACCCCTGTaGAAGCTTGTAAGCTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGALFRPL*KLVSFH Trigger: ATGGAAGCTTACAAGCTTCCACAGGGGTCTAAATAA...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTGAACCAAACTTTCCCTaGTGGTATCTTTTCACTCTT | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGAEPNFP*WYLFTL Trigger: AAGAGTGAAAAGATACCACCAGGGAAAGTTTGGTTC...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | AATACTGGGGCTGGAGAGACGGCTGTCATTAAGCACTTGTTGCTCTaGCAGAGGATCTGGCGTGGTTATCAGCACCCACATGGAGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: NTGAGETAVIKHLLL*QRIWRGYQHPHGGG Trigger: GCCTCCTCCATGTGGGTGCTGATAACCACGCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGCCGTCTCTCCAGCCCCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACCTTCACCATCAGCTCTaGGGATACAAGGGAGTGTCT | + |
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Preference number: 2 (lower is better) Translates to: VKSTATLAEDPGLASSTHLHHQL*GYKGVS Trigger: AGACACTCCCTTGTATCCTCAGAGCTGATGGTGAAG...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACATGAAGAAACAGCCATaGACACTGTGGCAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VKSTATLAEDPGLASSTHMKKQP*TLWQEE Trigger: CTCCTCCTGCCACAGTGTTCATGGCTGTTTCTTCAT...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTTGCATTATTATAGACTaGAAAGAATTCATCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: CAWCPGRPLGHVTPGTGACIIID*KEFIMG Trigger: CCCCATGATGAATTCTTTGCAGTCTATAATAATGCA...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | CTCCATTTCCAGAGCATCCTGCGGCCTCTTCTGCGGCACTGGGTGTATACACACGTGTCCTGCCTTTATTaGTTCTGTAGCAAGCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LHFQSILRPLLRHWVYTHVSCLY*FCSKPL Trigger: GAGAGGCTTGCTACAGAAGCAATAAAGGCAGGACAC...GTGTGTATACACCCAGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAATGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | AGGCTTAATACTGGGGCTGGAGAGACGGCTGTCATTAAGCACTTGTaGCTCTTGCAGAGGATCTGGCGTGGTTATCAGCACCCACATGGA | + |
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Preference number: 2 (lower is better) Translates to: RLNTGAGETAVIKHL*LLQRIWRGYQHPHG Trigger: TCCATGTGGGTGCTGATAACCACGCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGCCGTCTCTCCAGCCCCAGTATTAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCAGCGCGCATCCGAGGTaGGAATTCCAGCCCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFSAHPR*EFQPWG Trigger: TCCCCAGGGCTGGAATTCCCACCTCGGATGCGCGCT...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | AACAGGCTTAATACTGGGGCTGGAGAGACGGCTGTCATTAAGCACTaGTTGCTCTTGCAGAGGATCTGGCGTGGTTATCAGCACCCACAT | + |
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Preference number: 2 (lower is better) Translates to: NRLNTGAGETAVIKH*LLLQRIWRGYQHPH Trigger: ATGTGGGTGCTGATAACCACGCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGCCGTCTCTCCAGCCCCAGTATTAAGCCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTACAGTCACTGGAAGGTaGGGCGGGCATCAGGGATTC | + |
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Preference number: 2 (lower is better) Translates to: PVHLCQCSGYINQMLCQFTVTGR*GGHQGF Trigger: GAATCCCTGATGCCCGCCTCACCTTCCAGTGACTGT...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACAGATTAAGCCAAACATaGTGGTGTGAACCGGTAATG | + |
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Preference number: 2 (lower is better) Translates to: VKSTATLAEDPGLASSTHRLSQT*WCEPVM Trigger: CATTACCGGTTCACACCACCATGTTTGGCTTAATCT...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | ACCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTATTTCCAGAGCATCCTaGGGCCTCTTCTGCGGCACT | + |
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Preference number: 2 (lower is better) Translates to: TCSPLPVFWVYKSDALPVISRAS*GLFCGT Trigger: AGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAAT...AACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | CATTATCTGAGACAGAGAAACAAGCAGGCCTCTGAATGTGCACTTTaGGGCAAGTCTGGCCCATTTCTCCAAGCTCCTTTGCCGGATAAC | + |
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Preference number: 2 (lower is better) Translates to: HYLRQRNKQASECAL*GKSGPFLQAPLPDN Trigger: GTTATCCGGCAAAGGAGCTTGGAGAAATGGGCCAGACTTGCCCAAAAGTGCACATTCAGAGGCCTGCTTGTTTCTCTGTCTCAGATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACCTATCTAGGAACAACTaGCATTTCATTCAGTTTCAG | + |
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Preference number: 2 (lower is better) Translates to: VKSTATLAEDPGLASSTHLSRNN*HFIQFQ Trigger: CTGAAACTGAATGAAATGCCAGTTGTTCCTAGATAG...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACTCAGAACAATTTAAATaGTTCTGCCCCAATTGTCAC | + |
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Preference number: 2 (lower is better) Translates to: VKSTATLAEDPGLASSTHSEQFK*FCPNCH Trigger: GTGACAATTGGGGCAGAACCATTTAAATTGTTCTGA...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | TATGAAGAAACAGCCATGAACACTGTGGCAGGAGGAGGGCGGATCTaGGACTACATGGTATTTAAGAACCACTCCAGCTCTAGGAAAACC | + |
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Preference number: 2 (lower is better) Translates to: YEETAMNTVAGGGRI*DYMVFKNHSSSRKT Trigger: GGTTTTCCTAGAGCTGGAGTGGTTCTTAAATACCATGTAGTCCAAGATCCGCCCTCCTCCTGCCACAGTGTTCATGGCTGTTTCTTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | TGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTATCTaGCCAGTCTCTGTGTGCACAGCTGAACATCTCTTCACAGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: CQCSGYINQMLCQFI*PVSVCTAEHLFTGQ Trigger: TTGGCCTGTGAAGAGATGTTCAGCTGTGCACACAGAGACTGGCAAGATAAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | TCCAGCTCTAGGAAAACCAACCCATTTTCCTTCTGGCTCCTCGTCTaGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSSRKTNPFSFWLLV*TGRECQCMVREMRD Trigger: ATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAGGAGCCAGAAGGAAAATGGGTTGGTTTTCCTAGAGCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTGGCCTGGCATTCTCTTaGTCTCCAACTCAGATTACT | + |
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Preference number: 2 (lower is better) Translates to: PVHLCQCSGYINQMLCQFGLAFS*SPTQIT Trigger: AGTAATCTGAGTTGGAGACCAAGAGAATGCCAGGCC...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCCCACTCTTATCCTCATaGCCCTGTTCACAAGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFPLLSS*PCSQAV Trigger: GACTGCTTGTGAACAGGGCCATGAGGATAAGAGTGG...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 90 bp | TATCCTAAACATTATGCGCAGCACCCTCCTAATGTCATAATCCAGTaGCCTGACGTAAGAAACAGTCGCAGCACTAGACAGTTATGTGGG | + |
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Preference number: 2 (lower is better) Translates to: YPKHYAQHPPNVIIQ*PDVRNSRSTRQLCG Trigger: CCCACATAACTGTCTAGTGCTGCGACTGTTTCTTACGTCAGGCAACTGGATTATGACATTAGGAGGGTGCTGCGCATAATGTTTAGGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCTTGCCAGTCTCTGTGTaGACAGCTGAACATCTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFLPVSV*TAEHLF Trigger: GAAGAGATGTTCAGCTGTGCACACAGAGACTGGCAA...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCGCCTTCACAGAGAAATaGACAGCTCTCATTCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFAFTEK*TALIPK Trigger: CTTTGGAATGAGAGCTGTGCATTTCTCTGTGAAGGC...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCTCATTAAGCACTTGTTaGTCTTGCAGAGGATCTGGC | + |
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Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFSLSTC*SCRGSG Trigger: GCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGA...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CCA 90 bp | ACCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTGAAATTCTTGTACATTaGTGGAGGTGTCCTGCCTTT | + |
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Preference number: 2 (lower is better) Translates to: TCSPLPVFWVYKSDALPVEILVH*WRCPAF Trigger: AAAGGCAGGACACCTCCACCAATGTACAAGAATTTC...AACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCAAACCTGTTCACCTCTaGCAGTGTTCTGGGTATATA | + |
|
Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFKPVHL*QCSGYI Trigger: TATATACCCAGAACACTGGCAGAGGTGAACAGGTTT...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR TCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCGAAAGCAGCAAAACTTaGGAAATAAACAGGAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFESSKT*EINRKW Trigger: CCACTTCCTGTTTATTTCTCAAGTTTTGCTGCTTTC...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCTGTCAGCCTTCTCTCTaGTATACTATACACTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFCQPSL*YTIHSE Trigger: TTCAGAGTGTATAGTATAGCAGAGAGAAGGCTGACA...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTTACAAGGGAGTGTCTTaGCACAAAATTATCAGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: PVHLCQCSGYINQMLCQFYKGVS*HKIISN Trigger: GTTACTGATAATTTTGTGGCAAGACACTCCCTTGTA...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGACTACTCAACAATCCCAAACCCAGTGGTTCAAATTCTCAGGAGAGAAGTTGACAGGAAGGGAATaGCAATGTATGGTTAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LQTTQQSQTQWFKFSGEKLTGRE*QCMVRE Trigger: TTCCCTAACCATACATTGGCATTCCCTTCCTGTCAA...CTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR TCA 90 bp | TTACAGACTACTCAACAATCCCAAACCCAGTGGTTCAAATTCTCAGGAGAGAAGTACACTTTCTGCAGCTaGAATGCTTTCCAACATGTT | + |
|
Preference number: 2 (lower is better) Translates to: LQTTQQSQTQWFKFSGEKYTFCS*NAFQHV Trigger: AACATGTTGGAAAGCATTTCAGCTGCAGAAAGTGTA...CTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | CTCGTCTTGACAGGAAGGGAATGCCAATGTATGGTTAGGGAAATGAGAGATTTCTTCAGTTTCAGGATGTaGAAAATCCTTAAGGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: LVLTGRECQCMVREMRDFFSFRM*KILKDR Trigger: TCTGTCCTTAAGGATTTTGCACATCCTGAAACTGAA...GAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGGAGGCTCACAGAGTCTaGAACTCCATTTCCAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: KIQNTIALYSLSSEIEKREAHRV*NSISRA Trigger: TGCTCTGGAAATGGAGTTGCAGACTCTGTGAGCCTC...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGACTACTCAACAATCCCAAACCCAGTGGTTCAAATTCTCAGGAGAGAAGATAAATCAGATGCTCTaGCAGTTTATCTTGCCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: LQTTQQSQTQWFKFSGEKINQML*QFILPV Trigger: GACTGGCAAGATAAACTGGCAGAGCATCTGATTTAT...CTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGACTTTTGGGCAAGTCTaGCCCATTTCTCCAAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KIQNTIALYSLSSEIEKRTFGQV*PISPSS Trigger: GGAGCTTGGAGAAATGGGCCAGACTTGCCCAAAAGT...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCTTTCTGCAGCTGAAATaGTTTCCAACATGTTTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: CSPVNVFFSHTIATGLELFLQLK*FPTCFS Trigger: GGAGAAACATGTTGGAAAGCATTTCAGCTGCAGAAA...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR TCA 90 bp | GTAAATATGAACTCTCCTACACTTTCTGCAGCTGAAATGCTTTCCAACATGTTTATTCCTAAGTTTTCCTaGATGTCAGCCTTCTCTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VNMNSPTLSAAEMLSNMFIPKFS*MSAFSL Trigger: CAGAGAGAAGGCTGACATTCAGGAAAACTTAGGAAT...AAACATGTTGGAAAGCATTTCAGCTGCAGAAAGTGTAGGAGAGTTCATATTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCGAATTTGACTTAGAATaGCAAAGACCTGGAACAATC | + |
|
Preference number: 2 (lower is better) Translates to: CSPVNVFFSHTIATGLELEFDLE*QRPGTI Trigger: GATTGTTCCAGGTCTTTGTCATTCTAAGTCAAATTC...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCAATGAGGGAATTCTCTaGAGCAATTTCTCAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CSPVNVFFSHTIATGLELNEGIL*SNFSKF Trigger: GAACTTTGAGAAATTGCTGCAGAGAATTCCCTCATT...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR GCA 90 bp | TTACAGACTACTCAACAATCCCAAACCCAGTGGTTCAAATTCTCAGGAGAGAAGGTTGCCAGTGGAATATaGATTATTATAGACTGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LQTTQQSQTQWFKFSGEKVASGI*IIIDCK Trigger: TTTGCAGTCTATAATAATGCATATTCCACTGGCAAC...CTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGTTAAGCCAAACATGGTaGTGTGAACCGGTAATGCCA | + |
|
Preference number: 2 (lower is better) Translates to: KIQNTIALYSLSSEIEKRLSQTW*CEPVMP Trigger: TGGCATTACCGGTTCACACCACCATGTTTGGCTTAA...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CCA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGATTCTTGTACATTGGTaGAGGTGTCCTGCCTTTATT | + |
|
Preference number: 2 (lower is better) Translates to: KIQNTIALYSLSSEIEKRILVHW*RCPAFI Trigger: AATAAAGGCAGGACACCTCCACCAATGTACAAGAAT...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTTTCTGGCTCCTCGTCTaGACAGGAAGGGAATGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: CAWCPGRPLGHVTPGTGAFWLLV*TGRECQ Trigger: TTGGCATTCCCTTCCTGTCAAGACGAGGAGCCAGAA...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | GGAGGAAGCGCGCATCCGAGGTGGGAATTCCAGCCCTaGGGAGGTAGAAGCAGGAAGGACAGAAGTCCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGSAHPRWEFQP*GGRSRKDRSPR Trigger: CCTTGGACTTCTGTCCTTCCTGCTTCTACCTCCCCAGGGCTGGAATTCCCACCTCGGATGCGCGCTTCCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | CTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTaGAACTGGAGCTACAGGTGGTTGTTAACCATCACG | + |
|
Preference number: 3 (lower is better) Translates to: LVPREASRACDP*NWSYRWLLTIT Trigger: CGTGATGGTTAACAACCACCTGTAGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | TATGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTaGCCCCTGGAACTGGAGCTACAGGTGGTTGTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: YVPGAQGGLSGM*PLELELQVVVN Trigger: GTTAACAACCACCTGTAGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | TCTCGGGCATGTGACCCCTGGAACTGGAGCTACAGGTaGTTGTTAACCATCACGGAGGCCCTGGGAACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRACDPWNWSYR*LLTITEALGTE Trigger: CTCAGTTCCCAGGGCCTCCGTGATGGTTAACAACCACCTGTAGCTCCAGTTCCAGGGGTCACATGCCCGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | CAGGTGGTTGTTAACCATCACGGAGGCCCTGGGAACTaGGCACAGGTCCTTTGCAGGAGCAGGAAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QVVVNHHGGPGN*AQVLCRSRKCS Trigger: AGAGCACTTCCTGCTCCTGCAAAGGACCTGTGCTCAGTTCCCAGGGCCTCCGTGATGGTTAACAACCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | CAGGAGCTGGAGACATGGCTCAGGAGTGAAGAGCACTaGTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QELETWLRSEEH*YPCRGSRFSLQ Trigger: CTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | GCTCACAGAGTCTGCAACTCCATTTCCAGAGCATCCTaGGGCCTCTTCTGCGGCACTGGGTGTATACACACA | + |
|
Preference number: 3 (lower is better) Translates to: AHRVCNSISRAS*GLFCGTGCIHT Trigger: TGTGTGTATACACCCAGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAATGGAGTTGCAGACTCTGTGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | GAGACATGGCTCAGGAGTGAAGAGCACTGCTACCCTTaGAGAGGATCCAGGTTTAGCCTCCAGCACCCACAT | + |
|
Preference number: 3 (lower is better) Translates to: ETWLRSEEHCYP*RGSRFSLQHPH Trigger: ATGTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTTCCAGAGCATCCTGCGGCCTCTTCTGCGGCACTGGGTGTATACACACAGGCCTGGCATTCTCTaGGTCTCCAACTCAGATTAC | + |
|
Preference number: 3 (lower is better) Translates to: LHFQSILRPLLRHWVYTHRPGIL*VSNSDY Trigger: GTAATCTGAGTTGGAGACCAAGAGAATGCCAGGCCT...GTGTGTATACACCCAGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCCATTTCCAGAGCATCCTGCGGCCTCTTCTGCGGCACTGGGTGTATACACACGTGGGCTGGAAATTCTaGTACATTGGTGGAGGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LHFQSILRPLLRHWVYTHVGWKF*YIGGGV Trigger: GACACCTCCACCAATGTACAAGAATTTCCAGCCCAC...GTGTGTATACACCCAGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAATGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | TTCCCTGCATATAAGTATGTGTACTGTTTATGTGCCTaGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FPAYKYVYCLCA*CPGRPLGHVTP Trigger: AGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACATAAACAGTACACATACTTATATGCAGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACGTCATTAAGCACTTGTaGCTCTTGCAGAGGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: VKSTATLAEDPGLASSTHVIKHL*LLQRIW Trigger: CCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGAC...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | CACTGGGAGGCTGGGGCGGGAAGATTGCTACAAGTTTaGGGCCAGCCTGTCCTAAAGATACCCTATCTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HWEAGAGRLLQV*GQPVLKIPYLK Trigger: TTTGAGATAGGGTATCTTTAGGACAGGCTGGCCTCAAACTTGTAGCAATCTTCCCGCCCCAGCCTCCCAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | CTGGAGAGACGGCTGTCATTAAGCACTTGTTGCTCTTaGAGAGGATCTGGCGTGGTTATCAGCACCCACATG | + |
|
Preference number: 3 (lower is better) Translates to: LERRLSLSTCCS*RGSGVVISTHM Trigger: CATGTGGGTGCTGATAACCACGCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGCCGTCTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | ACAACAAATTCAGGAGCTGGAGACATGGCTCAGGAGTaGAGAGCACTGCTACCCTTGCAGAGGATCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: TTNSGAGDMAQE*RALLPLQRIQV Trigger: AACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTGAATTTGTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | TGGCAAAAACGTCAGGCAATCACCAGCTCTAGGATGTaGCAGGCTAGCTTTGAACTCCTAGATCCTGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WQKRQAITSSRM*QASFELLDPEA Trigger: TGCCTCAGGATCTAGGAGTTCAAAGCTAGCCTGGCACATCCTAGAGCTGGTGATTGCCTGACGTTTTTGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | AATGACCACAAGGCCCTGAGGGTGACTGGTGTAGCCTaGATGTCTTACCTTTCTTTACCCCTAAGGGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: NDHKALRVTGVA*MSYLSLPLRAL Trigger: TAGAGCCCTTAGGGGTAAAGAAAGGTAAGACATCCAGGCTACACCAGTCACCCTCAGGGCCTTGTGGTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAGAGCACTGCTACCCTTGCAGAGGATCCAGGTTTAGCCTCCAGCACCCACGTATACAAATTCCAATaGTTACTCCACTCCTGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VKSTATLAEDPGLASSTHVYKFQ*LLHSCH Trigger: GTGACAGGAGTGGAGTAACAATTGGAATTTGTATAC...GTGGGTGCTGGAGGCTAAACCTGGATCCTCTGCAAGGGTAGCAGTGCTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | TGGGCTGGAAATTCTTGTACATTGGTGGAGGTGTCCTaGCTTTATTGCTTCTGTAGCAAGCCTCTCTTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: WAGNSCTLVEVS*LYCFCSKPLFP Trigger: GGGGAAGAGAGGCTTGCTACAGAAGCAATAAAGGCAGGACACCTCCACCAATGTACAAGAATTTCCAGCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | TGCAACTCCATTTCCAGAGCATCCTGCGGCCTCTTCTaGGGCACTGGGTGTATACACACACAAATATTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: CNSISRASCGLF*GTGCIHTQILY Trigger: GTACAATATTTGTGTGTGTATACACCCAGTGCCGCAGAAGAGGCCGCAGGATGCTCTGGAAATGGAGTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | CAGATGCTCTGCCAGTTTATCTTGCCAGTCTCTGTGTaGACAGCTGAACATCTCTTCACAGGCCAAATCCTC | + |
|
Preference number: 3 (lower is better) Translates to: QMLCQFILPVSV*TAEHLFTGQIL Trigger: GAGGATTTGGCCTGTGAAGAGATGTTCAGCTGTGCACACAGAGACTGGCAAGATAAACTGGCAGAGCATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | ACACTGTGGCAGGAGGAGGGCGGATCTTGGACTACATaGTATTTAAGAACCACTCCAGCTCTAGGAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: TLWQEEGGSWTT*YLRTTPALGKP Trigger: TGGTTTTCCTAGAGCTGGAGTGGTTCTTAAATACCATGTAGTCCAAGATCCGCCCTCCTCCTGCCACAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | TCTTTCCCGCCCCCAGCCCGGTCATTTAATTTCTACTaGCAGGAACCAAACTTTCCCTGGTGGTATCTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SFPPPARSFNFY*QEPNFPWWYLF Trigger: GAAAAGATACCACCAGGGAAAGTTTGGTTCCTGTCAGTAGAAATTAAATGACCGGGCTGGGGGCGGGAAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | CTAAGCGCTACCTCCAGCATCAAACCTGTTCACCTCTaGCAGTGTTCTGGGTATATAAATCAGATGCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSATSSIKPVHL*QCSGYINQMLC Trigger: GCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGGTTTGATGCTGGAGGTAGCGCTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR TCA 72 bp | CTTCCATTATCTGAGACAGAGAAACAAGCAGGCCTCTaGATGTGCACTTTTGGGCAAGTCTGGCCCATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LPLSETEKQAGL*MCTFGQVWPIS Trigger: AGAAATGGGCCAGACTTGCCCAAAAGTGCACATTCAGAGGCCTGCTTGTTTCTCTGTCTCAGATAATGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | CTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTaGCAGTTTATCTTGCCAGTCTCTGTGTGCACAGCT | + |
|
Preference number: 3 (lower is better) Translates to: LCQCSGYINQML*QFILPVSVCTA Trigger: AGCTGTGCACACAGAGACTGGCAAGATAAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | GCATGGACACCACCAACAAAAAGATTAAGCCAAACATaGTGGTGTGAACCGGTAATGCCAGTTATCCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AWTPPTKRLSQT*WCEPVMPVIQH Trigger: GTGCTGGATAACTGGCATTACCGGTTCACACCACCATGTTTGGCTTAATCTTTTTGTTGGTGGTGTCCATGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR CCA 72 bp | ACCTATATCAAACAACAAATTCAGGAGCTGGAGACATaGCTCAGGAGTGAAGAGCACTGCTACCCTTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TYIKQQIQELET*LRSEEHCYPCR Trigger: TCTGCAAGGGTAGCAGTGCTCTTCACTCCTGAGCCATGTCTCCAGCTCCTGAATTTGTTGTTTGATATAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR-3UTR CAA 90 bp | AGGGTCTGGGACCAGCCCACTGTAAATATGAACTCTCCTACACTTTCTGCAGCTTGTCAAATCTGTGAGTaGCCAGTGGAATATGCATTA | + |
|
Preference number: 3 (lower is better) Translates to: RVWDQPTVNMNSPTLSAACQICE*PVEYAL Trigger: TAATGCATATTCCACTGGCAACTCACAGATTTGACA...AGCTGCAGAAAGTGTAGGAGAGTTCATATTTACAGTGGGCTGGTCCCAGACCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | AATTCTTGTACATTGGTGGAGGTGTCCTGCCTTTATTaGTTCTGTAGCAAGCCTCTCTTCCCCTTAGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: NSCTLVEVSCLY*FCSKPLFPLGS Trigger: TGATCCTAAGGGGAAGAGAGGCTTGCTACAGAAGCAATAAAGGCAGGACACCTCCACCAATGTACAAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
||
| 3UTR GCA 72 bp | AGAATCTATGGGCCTCGTTTTCTGGATTTGTTCCAGTaGATATGGCAAAAACGTCAGGCAATCACCAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: RIYGPRFLDLFQ*IWQKRQAITSS Trigger: AGAGCTGGTGATTGCCTGACGTTTTTGCCATATGCACTGGAACAAATCCAGAAAACGAGGCCCATAGATTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | TGCTCAAGAACAAGGACAGTAGTTTGCAGCTTTACGTaGGCAAAAGGTCAGTTAGAACTTCAGCATGGACAC | + |
|
Preference number: 3 (lower is better) Translates to: CSRTRTVVCSFT*AKGQLELQHGH Trigger: GTGTCCATGCTGAAGTTCTAACTGACCTTTTGCCCACGTAAAGCTGCAAACTACTGTCCTTGTTCTTGAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | TATAAAGTGAGTGGGCTGGAAATTCTTGTACATTGGTaGAGGTGTCCTGCCTTTATTGCTTCTGTAGCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: YKVSGLEILVHW*RCPAFIASVAS Trigger: GCTTGCTACAGAAGCAATAAAGGCAGGACACCTCCACCAATGTACAAGAATTTCCAGCCCACTCACTTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 72 bp | TCTGTAGCCCAACATTCAGCCATTCCTAAGTTTTCCTaGATGTCAGCCTTCTCTCTGCTATACTATACACTC | + |
|
Preference number: 3 (lower is better) Translates to: SVAQHSAIPKFS*MSAFSLLYYTL Trigger: GAGTGTATAGTATAGCAGAGAGAAGGCTGACATTCAGGAAAACTTAGGAATGGCTGAATGTTGGGCTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 72 bp | TTCCAACATGTTTCTCCTTCACTTCACCATCAGCTCTaGGGATACAAGGGAGTGTCTTGCCACAAAATTATC | + |
|
Preference number: 3 (lower is better) Translates to: FQHVSPSLHHQL*GYKGVSCHKII Trigger: GATAATTTTGTGGCAAGACACTCCCTTGTATCCTCAGAGCTGATGGTGAAGTGAAGGAGAAACATGTTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 72 bp | GTACTTCATAGAAATGGCCACACTCATAAAGTTAACTaGTTTATTGGGGGTAGGGAGGAACGGACAAAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: VLHRNGHTHKVN*FIGGREERTKA Trigger: GGCTTTTGTCCGTTCCTCCCTACCCCCAATAAATCAGTTAACTTTATGAGTGTGGCCATTTCTATGAAGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR GCA 72 bp | TTTTCCTTCTGGCTCCTCGTCTTGACAGGAAGGGAATaGCAATGTATGGTTAGGGAAATGAGAGATTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FSFWLLVLTGRE*QCMVREMRDFK Trigger: TTTGAAATCTCTCATTTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAGGAGCCAGAAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | CAATGGCCAACCTTAGCAGGAAACATTTTACATGCATaGAGTGTTGGTTATGAAGGAAAGCTGAAGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QWPTLAGNILHA*SVGYEGKLKSS Trigger: AGAGGACTTCAGCTTTCCTTCATAACCAACACTCCATGCATGTAAAATGTTTCCTGCTAAGGTTGGCCATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTGGTAGAACCAAAATCTaGCTGCAGTTACAAATACTT | + |
|
Preference number: 3 (lower is better) Translates to: PVHLCQCSGYINQMLCQFGRTKI*LQLQIL Trigger: AAGTATTTGTAACTGCAGCAAGATTTTGGTTCTACC...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | AATTATAAAGTGAGTGGGCTGGAAATTCTTGTACATTaGTGGAGGTGTCCTGCCTTTATTGCTTCTGTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NYKVSGLEILVH*WRCPAFIASVA Trigger: TGCTACAGAAGCAATAAAGGCAGGACACCTCCACCAATGTACAAGAATTTCCAGCCCACTCACTTTATAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGGCTGTCATTAAGCACTaGTTGCTCTTGCAGAGGATC | + |
|
Preference number: 3 (lower is better) Translates to: KIQNTIALYSLSSEIEKRAVIKH*LLLQRI Trigger: GATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGC...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | TTAAAATTACAGACTACTCAACAATCCCAAACCCAGTaGTTCAAATTCTCAGGAGAGAAGCCAAAGTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: LKLQTTQQSQTQ*FKFSGEKPKST Trigger: TGTAGACTTTGGCTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAATTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGCCACAACCCACTATCTaGTTTCCCAAAGGAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KIQNTIALYSLSSEIEKRPQPTI*FPKGKN Trigger: ATTCTTTCCTTTGGGAAACAAGATAGTGGGTTGTGG...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR-3UTR CAA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGAACTCAGATTACTTATaGACAGTTACATCTGTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: KIQNTIALYSLSSEIEKRNSDYL*TVTSVC Trigger: GCACACAGATGTAACTGTCAATAAGTAATCTGAGTT...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR TCA 72 bp | ATAATATACCTACACTATGCTGAAGTAAGTCATTACTaGAAATGTCAAATGATAAACTGGGAGTGGTGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: IIYLHYAEVSHY*KCQMINWEWWC Trigger: GCACCACCACTCCCAGTTTATCATTTGACATTTTCAGTAATGACTTACTTCAGCATAGTGTAGGTATATTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CCA 72 bp | CTTAGTTGTTTTTACATAAAAATATGGGCGTCATCATaGTATGCACATTACCACCAGAAAGATCAACTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: LSCFYIKIWASS*YAHYHQKDQLY Trigger: GTAAAGTTGATCTTTCTGGTGGTAATGTGCATACCATGATGACGCCCATATTTTTATGTAAAAACAACTAAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR CCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTTCCTCTAATGCTGCCTaGGGATCCCCGTCGATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CAWCPGRPLGHVTPGTGASSNAA*GSPSIR Trigger: TCTGATCGACGGGGATCCCCAGGCAGCATTAGAGGA...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR TCA 90 bp | TGTGCCTGGTGCCCAGGGAGGCCTCTCGGGCATGTGACCCCTGGAACTGGAGCTAGACACTTCAGATTCTaGTCCATTCTGAATTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: CAWCPGRPLGHVTPGTGARHFRF*SILNFL Trigger: CAAGAAATTCAGAATGGATCAGAATCTGAAGTGTCT...AGCTCCAGTTCCAGGGGTCACATGCCCGAGAGGCCTCCCTGGGCACCAGGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | GCACTGGGAGGCTGGGGCGGGAAGATTGCTACAAGTTaGAGGCCAGCCTGTCCTAAAGATACCCTATCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGGWGGKIATS*RPACPKDTLSQ Trigger: TTGAGATAGGGTATCTTTAGGACAGGCTGGCCTCAAACTTGTAGCAATCTTCCCGCCCCAGCCTCCCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR CCA 90 bp | AGGGTCTGGGACCAGCCCACTGTAAATATGAACTCTCCTACACTTTCTGCAGCTCTCTGGAAAAGCCGCTaGGACGATGCAGGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RVWDQPTVNMNSPTLSAALWKSR*DDAGPA Trigger: AGCAGGACCTGCATCGTCCCAGCGGCTTTTCCAGAG...AGCTGCAGAAAGTGTAGGAGAGTTCATATTTACAGTGGGCTGGTCCCAGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR GCA 90 bp | TTACAGACTACTCAACAATCCCAAACCCAGTGGTTCAAATTCTCAGGAGAGAAGAAGCCGCTGGGACGATaGAGGTCCTGCTGCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQTTQQSQTQWFKFSGEKKPLGR*RSCCSC Trigger: GCAGCTGCAGCAGGACCTGCATCGTCCCAGCGGCTT...CTTCTCTCCTGAGAATTTGAACCACTGGGTTTGGGATTGTTGAGTAGTCTGTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | AATACTGGGGCTGGAGAGACGGCTGTCATTAAGCACTaGTTGCTCTTGCAGAGGATCTGGCGTGGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGAGETAVIKH*LLLQRIWRGYQ Trigger: CTGATAACCACGCCAGATCCTCTGCAAGAGCAACAAGTGCTTAATGACAGCCGTCTCTCCAGCCCCAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | AGACAGAGAAACAAGCAGGCCTCTGAATGTGCACTTTaGGGCAAGTCTGGCCCATTTCTCCAAGCTCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RQRNKQASECAL*GKSGPFLQAPL Trigger: CAAAGGAGCTTGGAGAAATGGGCCAGACTTGCCCAAAAGTGCACATTCAGAGGCCTGCTTGTTTCTCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR CCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTGCATCTGAGAAGCTCTaGAAAAGCCGCTGGGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVHLCQCSGYINQMLCQFASEKL*KSRWDD Trigger: ATCGTCCCAGCGGCTTTTCCAGAGCTTCTCAGATGC...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | CATTATGCGCAGCACCCTCCTAATGTCATAATCCAGTaGCCTGACGTAAGAAACAGTCGCAGCACTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: HYAQHPPNVIIQ*PDVRNSRSTRQ Trigger: CTGTCTAGTGCTGCGACTGTTTCTTACGTCAGGCAACTGGATTATGACATTAGGAGGGTGCTGCGCATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | AGGAAAACCAACCCATTTTCCTTCTGGCTCCTCGTCTaGACAGGAAGGGAATGCCAATGTATGGTTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RKTNPFSFWLLV*TGRECQCMVRE Trigger: TTCCCTAACCATACATTGGCATTCCCTTCCTGTCAAGACGAGGAGCCAGAAGGAAAATGGGTTGGTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR TCA 90 bp | CCTGTTCACCTCTGCCAGTGTTCTGGGTATATAAATCAGATGCTCTGCCAGTTTGTCATACTTGATTTTTaGCTGGGTCCTCTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PVHLCQCSGYINQMLCQFVILDF*LGPLRC Trigger: GCATCTCAGAGGACCCAGTCAAAAATCAAGTATGAC...AAACTGGCAGAGCATCTGATTTATATACCCAGAACACTGGCAGAGGTGAACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | CCTTTCCCTTTAGTGCTCAAGAACAAGGACAGTAGTTaGCAGCTTTACGTGGGCAAAAGGTCAGTTAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: PFPLVLKNKDSS*QLYVGKRSVRT Trigger: AGTTCTAACTGACCTTTTGCCCACGTAAAGCTGCAAACTACTGTCCTTGTTCTTGAGCACTAAAGGGAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | ATAGAAATGGCCACACTCATAAAGTTAACTGATTTATaGGGGGTAGGGAGGAACGGACAAAAGCCTACATGC | + |
|
Preference number: 4 (lower is better) Translates to: IEMATLIKLTDL*GVGRNGQKPTC Trigger: GCATGTAGGCTTTTGTCCGTTCCTCCCTACCCCCAATAAATCAGTTAACTTTATGAGTGTGGCCATTTCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR TCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCAGACAACTCTCTCTCTaGAAATCCCACACGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: CSPVNVFFSHTIATGLELRQLSL*KSHTYI Trigger: GATGTACGTGTGGGATTTTCAGAGAGAGAGTTGTCT...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR TCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCGATACCAGTCATACTTaGTTTTTGACTGGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSPVNVFFSHTIATGLELDTSHT*FLTGSS Trigger: AGAGGACCCAGTCAAAAATCAAGTATGACTGGTATC...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR CCA 90 bp | TGTTCCCCTGTAAATGTTTTCTTCAGTCATACCATAGCAACTGGTTTGGAACTCCCATCTCACCGCCTCTaGCTTTTTCATTTTAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSPVNVFFSHTIATGLELPSHRL*LFHFNF Trigger: GAAATTAAAATGAAAAAGCCAGAGGCGGTGAGATGG...GAGTTCCAAACCAGTTGCTATGGTATGACTGAAGAAAACATTTACAGGGGAACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS-3UTR TCA 90 bp | AAAATTCAGAATACCATAGCACTTTATTCCCTAAGCTCTGAGATAGAAAAGAGGCGTACATCATTCTTCTaGACGCTCTTGATCATAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KIQNTIALYSLSSEIEKRRTSFF*TLLIIR Trigger: CCTTATGATCAAGAGCGTTCAGAAGAATGATGTACG...CCTCTTTTCTATCTCAGAGCTTAGGGAATAAAGTGCTATGGTATTCTGAATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| 3UTR CAA 72 bp | ACATTACCACCAGAAAGATCAACTTTACTAATGGGGTaGGAAATAATATACCTACACTATGCTGAAGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TLPPERSTLLMG*EIIYLHYAEVS Trigger: ACTTACTTCAGCATAGTGTAGGTATATTATTTCCAACCCCATTAGTAAAGTTGATCTTTCTGGTGGTAATGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS TCA 90 bp | TTTGATTTCGCCAACCAACTTATCCCAGTTCCGGGTATAGTGAGATaGGGACGGATACATGTTCTTTACATCTGCTGTGAACTGTTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FDFANQLIPVPGIVR*GRIHVLYICCELFR Trigger: CCGAAACAGTTCACAGCAGATGTAAAGAACATGTATCCGTCCTCATCTCACTATACCCGGAACTGGGATAAGTTGGTTGGCGAAATCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS TCA 72 bp | GAGATGAGGACGGATACATGTTCTTTACATCTGCTGTaGACTGTTTCGGTGTGGGCTCATCTCCTTGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: EMRTDTCSLHLL*TVSVWAHLLVP Trigger: AGGGACAAGGAGATGAGCCCACACCGAAACAGTTCACAGCAGATGTAAAGAACATGTATCCGTCCTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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| CDS TCA 72 bp | GCCAACCAACTTATCCCAGTTCCGGGTATAGTGAGATaGGGACGGATACATGTTCTTTACATCTGCTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ANQLIPVPGIVR*GRIHVLYICCE Trigger: TTCACAGCAGATGTAAAGAACATGTATCCGTCCTCATCTCACTATACCCGGAACTGGGATAAGTTGGTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000054908.10 |
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