Pregenerated sensors for SUGP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000011306Ensembl transcript IDs: ENSMUST00000011450.8
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCAGGCCTCTGCCTCTAGACAGGCCCTACCCATACTCCAGCTGTaGCCAGTCCACACCAGCCCATGCACATATCATGAAGTGTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: AQASASRQALPILQL*PVHTSPCTYHEVFG Trigger: TCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | CTCAATGAGCCTCAGTGGGACTGGAGGAGGGACAAAAGAGGTTTCTaGCAACAGCAGGAACTGGAATGCTGGACAGGTGAGCATTGGGAC | + |
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Preference number: 1 (lower is better) Translates to: LNEPQWDWRRDKRGF*QQQELECWTGEHWD Trigger: GTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | TGGCTGGTCTCCAGTTACTGTGAACTCAATGAGCCTCAGTGGGACTaGAGGAGGGACAAAAGAGGTTTCTGGCAACAGCAGGAACTGGAA | + |
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Preference number: 1 (lower is better) Translates to: WLVSSYCELNEPQWD*RRDKRGFWQQQELE Trigger: TTCCAGTTCCTGCTGTTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACTGGAGACCAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | GGGACTGGAGGAGGGACAAAAGAGGTTTCTGGCAACAGCAGGAACTaGAATGCTGGACAGGTGAGCATTGGGACTTTAATACACAGCACA | + |
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Preference number: 1 (lower is better) Translates to: GTGGGTKEVSGNSRN*NAGQVSIGTLIHST Trigger: TGTGCTGTGTATTAAAGTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | ATCAACTGGCTGGTCTCCAGTTACTGTGAACTCAATGAGCCTCAGTaGGACTGGAGGAGGGACAAAAGAGGTTTCTGGCAACAGCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: INWLVSSYCELNEPQ*DWRRDKRGFWQQQE Trigger: TTCCTGCTGTTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACTGGAGACCAGCCAGTTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | AAGCCTCTTTTTCCTCTGCCTGGGGTAAAGTCTGAATCAACTGGCTaGTCTCCAGTTACTGTGAACTCAATGAGCCTCAGTGGGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: KPLFPLPGVKSESTG*SPVTVNSMSLSGTG Trigger: TCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACTGGAGACCAGCCAGTTGATTCAGACTTTACCCCAGGCAGAGGAAAAAGAGGCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR TCA 90 bp | ATGAAGTGTTTGGAAGCCTCTTTTTCCTCTGCCTGGGGTAAAGTCTaGATCAACTGGCTGGTCTCCAGTTACTGTGAACTCAATGAGCCT | + |
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Preference number: 1 (lower is better) Translates to: MKCLEASFSSAWGKV*INWLVSSYCELNEP Trigger: AGGCTCATTGAGTTCACAGTAACTGGAGACCAGCCAGTTGATTCAGACTTTACCCCAGGCAGAGGAAAAAGAGGCTTCCAAACACTTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 90 bp | GTACTCAGATTTATCATTCTTATTCTCTTGAGGACTTTGACTAGCTaGAGAGGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAG | + |
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Preference number: 1 (lower is better) Translates to: VLRFIILILLRTLTS*RGLGRIQGSTNGMK Trigger: CTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACCTCTCCAGCTAGTCAAAGTCCTCAAGAGAATAAGAATGATAAATCTGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR-3UTR GCA 90 bp | TTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGCCTCTGCCTCTAGACCCCATACTCCAGCTGTaGCCAGTCCACACCAGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LQLCSEQYMRQPRPLPLDPILQL*PVHTSP Trigger: TGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGG...GTCTAGAGGCAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR-3UTR CCA 90 bp | TTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGCCTCTGCCTCTAGACCAGGAACTGGAATGCTaGACAGGTGAGCATTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LQLCSEQYMRQPRPLPLDQELEC*TGEHWD Trigger: GTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTG...GTCTAGAGGCAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTACTGTGAACTCAATGAGCCTCAGTGGGACTGGAGGAGGGACAAAAGAGGTGGCAACAGCAGGAACTaGAATGCTGGACAGGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: SYCELNEPQWDWRRDKRGGNSRN*NAGQVS Trigger: GCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTGCC...ACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR-3UTR CCA 90 bp | ACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTTCCTCTGCCCTCAATGAGCCTCAGTaGGACTGGAGGAGGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: TPAHAHIMKCLEASFSSALNEPQ*DWRRDK Trigger: TTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAG...GGCAGAGGAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR TCA 72 bp | ATCACGGGCTCCAGCTGGGCTCTTGCAGCTATGCAGTaGGCAATACATGAGACAGCCCAGGCCTCTGCCTCT | + |
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Preference number: 3 (lower is better) Translates to: ITGSSWALAAMQ*AIHETAQASAS Trigger: AGAGGCAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGCTGGAGCCCGTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR GCA 72 bp | TCTGCCTCTAGACAGGCCCTACCCATACTCCAGCTGTaGCCAGTCCACACCAGCCCATGCACATATCATGAA | + |
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Preference number: 3 (lower is better) Translates to: SASRQALPILQL*PVHTSPCTYHE Trigger: TTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCTGTCTAGAGGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR GCA 72 bp | CCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATaGACATATCATGAAGTGTTTGGAAGCCTCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: PILQLCPVHTSP*TYHEVFGSLFF Trigger: GAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | TCCAGTTACTGTGAACTCAATGAGCCTCAGTGGGACTaGAGGAGGGACAAAAGAGGTTTCTGGCAACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SSYCELNEPQWD*RRDKRGFWQQQ Trigger: CTGCTGTTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | CTGGTCTCCAGTTACTGTGAACTCAATGAGCCTCAGTaGGACTGGAGGAGGGACAAAAGAGGTTTCTGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LVSSYCELNEPQ*DWRRDKRGFWQ Trigger: TTGCCAGAAACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACTGGAGACCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR TCA 72 bp | TTGGAAGCCTCTTTTTCCTCTGCCTGGGGTAAAGTCTaGATCAACTGGCTGGTCTCCAGTTACTGTGAACTC | + |
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Preference number: 3 (lower is better) Translates to: LEASFSSAWGKV*INWLVSSYCEL Trigger: GAGTTCACAGTAACTGGAGACCAGCCAGTTGATTCAGACTTTACCCCAGGCAGAGGAAAAAGAGGCTTCCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | CAACAGCAGGAACTGGAATGCTGGACAGGTGAGCATTaGGACTTTAATACACAGCACAACACTTGTGACCAC | + |
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Preference number: 3 (lower is better) Translates to: QQQELECWTGEH*DFNTQHNTCDH Trigger: GTGGTCACAAGTGTTGTGCTGTGTATTAAAGTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | GGAGGGACAAAAGAGGTTTCTGGCAACAGCAGGAACTaGAATGCTGGACAGGTGAGCATTGGGACTTTAATA | + |
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Preference number: 3 (lower is better) Translates to: GGTKEVSGNSRN*NAGQVSIGTLI Trigger: TATTAAAGTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTGCCAGAAACCTCTTTTGTCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | TTTCCTCTGCCTGGGGTAAAGTCTGAATCAACTGGCTaGTCTCCAGTTACTGTGAACTCAATGAGCCTCAGT | + |
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Preference number: 3 (lower is better) Translates to: FPLPGVKSESTG*SPVTVNSMSLS Trigger: ACTGAGGCTCATTGAGTTCACAGTAACTGGAGACCAGCCAGTTGATTCAGACTTTACCCCAGGCAGAGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR GCA 72 bp | GACAAAAGAGGTTTCTGGCAACAGCAGGAACTGGAATaGTGGACAGGTGAGCATTGGGACTTTAATACACAG | + |
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Preference number: 3 (lower is better) Translates to: DKRGFWQQQELE*WTGEHWDFNTQ Trigger: CTGTGTATTAAAGTCCCAATGCTCACCTGTCCAGCATTCCAGTTCCTGCTGTTGCCAGAAACCTCTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CCA 72 bp | TTTATCATTCTTATTCTCTTGAGGACTTTGACTAGCTaGAGAGGTCTGGGGAGGATCCAGGGCAGCACAAAT | + |
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Preference number: 3 (lower is better) Translates to: FIILILLRTLTS*RGLGRIQGSTN Trigger: ATTTGTGCTGCCCTGGATCCTCCCCAGACCTCTCCAGCTAGTCAAAGTCCTCAAGAGAATAAGAATGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTCTGCCTCTAGACAGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACCTCGGGGCCTCCTTCTaGCACAAAACGGGCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: QASASRQALPILQLCPVHLGASF*HKTGQL Trigger: AAGCTGGCCCGTTTTGTGGCAGAAGGAGGCCCCGAG...GTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | GAGCAATACATGAGACAGCCCAGGCCTCTGCCTCTAGACAGGCCCTACCCATACGGGGTTGACAGCAGGTaGTGGGGCCACTGGAGTGGG | + |
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Preference number: 4 (lower is better) Translates to: EQYMRQPRPLPLDRPYPYGVDSR*WGHWSG Trigger: CCCACTCCAGTGGCCCCAGCACCTGCTGTCAACCCC...GTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTGGGCTGTCTCATGTATTGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | CAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGTGTTGGCATGCTaGGAGGGGCCCTGGGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QGSTNGMKLQRLTITGSSWVLAC*EGPWGL Trigger: CAGCCCCCAGGGCCCCTCCCAGCATGCCAACACCCA...GCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCGCCGCAGGCTGGGGTTaGGAGCAGGAGCAGGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GLGRIQGSTNGMKLQRLTAAGWG*EQEQGR Trigger: CCTTCCCTGCTCCTGCTCCCAACCCCAGCCTGCGGC...GGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | AGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTAGCTGGGTGTTGGCATaGTGGGAGGGGCCCTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: STNGMKLQRLTITGSSWASWVLA*WEGPWG Trigger: CCCCCAGGGCCCCTCCCAGCATGCCAACACCCAGCT...AGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | ACTAGCTGGAGAGGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGACTTTCGCCGCAGGCTaGGGTTGGGAGCAGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: TSWRGLGRIQGSTNGMKLTFAAG*GWEQEQ Trigger: CTGCTCCTGCTCCCAACCCCAGCCTGCGGCGAAAGT...CAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACCTCTCCAGCTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCCTGTGTCAGCTGCTCTaGCCACTCCCGTGTCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPYPYSSCAQSTPAHAHILCQLL*PLPCLV Trigger: GACAAGACACGGGAGTGGGCAGAGCAGCTGACACAG...GATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | CCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGGCAGAAAGTCACCGATaGAGTGCTTGCCCCGACCCA | + |
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Preference number: 4 (lower is better) Translates to: PYPYSSCAQSTPAHAHIMAESHR*SACPDP Trigger: TGGGTCGGGGCAAGCACTTCATCGGTGACTTTCTGC...CATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTCTGCCTCTAGACAGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACTCCAGACTTGGGTTGTaGCATCCCAAACCACCGATT | + |
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Preference number: 4 (lower is better) Translates to: QASASRQALPILQLCPVHSRLGL*HPKPPI Trigger: AATCGGTGGTTTGGGATGGCACAACCCAAGTCTGGA...GTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | ACTAGCTGGAGAGGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGGGCTCCCTCTGGGGGTaGAACTTTGATTTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: TSWRGLGRIQGSTNGMKLGSLWG*NFDFQP Trigger: TGGCTGGAAATCAAAGTTTCACCCCCAGAGGGAGCC...CAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACCTCTCCAGCTAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GCTCCAGCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGTCATCATCAGGGGACTaGAAGACACTCGGGCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: APAGLLQLCSEQYMRQPRSSSGD*KTLGRC Trigger: ACACCGCCCGAGTGTCTTCCAGTCCCCTGATGATGA...CCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGCTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCCAGCTGTTTGGCATGTaGGTAGTTCTTCACAGGACC | + |
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Preference number: 4 (lower is better) Translates to: RPYPYSSCAQSTPAHAHIQLFGM*VVLHRT Trigger: GGTCCTGTGAAGAACTACTCACATGCCAAACAGCTG...GATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCTTTGGGCTTCTTTCCTaGTCTCGGCTACCTTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: RPYPYSSCAQSTPAHAHIFGLLS*SRLPSF Trigger: GAAGGAAGGTAGCCGAGATCAGGAAAGAAGCCCAAA...GATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGCTGGTGCTCCCAGGTaGCCAGTTCACTGTCTACCT | + |
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Preference number: 4 (lower is better) Translates to: GEDPGQHKWDEAAKIDHHAGAPR*PVHCLP Trigger: AGGTAGACAGTGAACTGGGCACCTGGGAGCACCAGC...GTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACAGGATGAGGGGGCTGTaGACTGGGCACATGACTCTG | + |
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Preference number: 4 (lower is better) Translates to: GEDPGQHKWDEAAKIDHHRMRGL*TGHMTL Trigger: CAGAGTCATGTGCCCAGTCCACAGCCCCCTCATCCT...GTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGTCCACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTTGCTGGGAGGGGCCCTaGGGGCTGAATCTGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: AQSTPAHAHIMKCLEASFCWEGP*GLNLCL Trigger: CAAGCACAGATTCAGCCCCCAGGGCCCCTCCCAGCA...AAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTGGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CAA 72 bp | ATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATaGACCATCACGGGCTCCAGCTGGGCTCTTGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: IQGSTNGMKLQR*TITGSSWALAA Trigger: AGCTGCAAGAGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | AGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTGACCCCCGTCTGCTATaGACCTGGCCAACTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: STNGMKLQRLTITGSSWADPRLL*TWPTFL Trigger: CAGAAAAGTTGGCCAGGTTCATAGCAGACGGGGGTC...AGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | AGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCCATAGCCAAGCCCTTTaGGATCCTGAACTGAAAGAG | + |
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Preference number: 4 (lower is better) Translates to: RPYPYSSCAQSTPAHAHIHSQAL*DPELKE Trigger: CTCTTTCAGTTCAGGATCTCAAAGGGCTTGGCTATG...GATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | GCCCAGTCCACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTCATCAGACAGCTCTGTaGCACCCACCAGGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AQSTPAHAHIMKCLEASFHQTAL*HPPGPQ Trigger: CTGTGGGCCTGGTGGGTGTCACAGAGCTGTCTGATG...AAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | CAGGCCTCTGCCTCTAGACAGGCCCTACCCATACTCCAGCTGTGCCCAGTCCACCAAACTTGTTGGAGATaGAGGAGTTATGTGCATCAG | + |
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Preference number: 4 (lower is better) Translates to: QASASRQALPILQLCPVHQTCWR*RSYVHQ Trigger: CTGATGCACATAACTCCTGCATCTCCAACAAGTTTG...GTGGACTGGGCACAGCTGGAGTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCACTCATCATCCTCCTTaGAGAGTTCAGCTGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: GLGRIQGSTNGMKLQRLTTHHPP*RVQLAG Trigger: ACCGGCCAGCTGAACTCTCCAAGGAGGATGATGAGT...GGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | GCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGCCTCTGAGAAAACTGAAGGCCTaGTTCTCACGGTTGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: AGLLQLCSEQYMRQPRPLRKLKA*FSRLFW Trigger: CCAGAACAACCGTGAGAATCAGGCCTTCAGTTTTCT...CAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | GCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGCCTCTGCAGCTGCTTCTTTTGTaGATCAGACAGCTCTGTGAC | + |
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Preference number: 4 (lower is better) Translates to: AGLLQLCSEQYMRQPRPLQLLLL*IRQLCD Trigger: GTCACAGAGCTGTCTGATGCACAAAAGAAGCAGCTG...CAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | GCTCCAGCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGATGTCATACATCTGCTaGATCTCCTGCTGCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: APAGLLQLCSEQYMRQPRMSYIC*ISCCSF Trigger: GAAGGAGCAGCAGGAGATGCAGCAGATGTATGACAT...CCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGCTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTTCCTCTGCCGAGGGGGCTGTGGACTaGGCACATGACTCTGTCTGG | + |
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Preference number: 4 (lower is better) Translates to: TPAHAHIMKCLEASFSSAEGAVD*AHDSVW Trigger: CCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTC...GGCAGAGGAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | AGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTGTTTCTTCAAGGAGCTaGGTGTTGGCATGCTGGGAG | + |
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Preference number: 4 (lower is better) Translates to: STNGMKLQRLTITGSSWAVSSRS*VLACWE Trigger: CTCCCAGCATGCCAACACCCAGCTCCTTGAAGAAAC...AGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | AGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTCTGGGGGTGAAACTTTaGTTTCCAGCCACTGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: STNGMKLQRLTITGSSWALGVKL*FPATAH Trigger: ATGAGCAGTGGCTGGAAATCAAAGTTTCACCCCCAG...AGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | AGTTACTGTGAACTCAATGAGCCTCAGTGGGACTGGAGGAGGGACAAAAGAGGTCCGATTGGCCTTTCCTaGAACATCCCGGTTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SYCELNEPQWDWRRDKRGPIGLS*NIPVVH Trigger: ATGGACAACCGGGATGTTGCAGGAAAGGCCAATCGG...ACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | CCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGCATTGGCAAACTTGTTaGAGATGCAGGAGTTATGTG | + |
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Preference number: 4 (lower is better) Translates to: PYPYSSCAQSTPAHAHIMHWQTC*RCRSYV Trigger: CACATAACTCCTGCATCTCCAACAAGTTTGCCAATG...CATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | AATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTCTTGCAGGAAGCTGCCATCATTaGCAAACTTGTTGGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: NGMKLQRLTITGSSWALAGSCHH*QTCWRC Trigger: GCATCTCCAACAAGTTTGCCAATGATGGCAGCTTCC...TGCAAGAGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | AGTTACTGTGAACTCAATGAGCCTCAGTGGGACTGGAGGAGGGACAAAAGAGGTGTGAAACTTTCTGGGTaGCTGCCTGTGGCTTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: SYCELNEPQWDWRRDKRGVKLSG*LPVAFG Trigger: CCCAAAAGCCACAGGCAGCCACCCAGAAAGTTTCAC...ACCTCTTTTGTCCCTCCTCCAGTCCCACTGAGGCTCATTGAGTTCACAGTAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | CACAGGATAGAGATGGATGCCAGAACATTTCATAGTCCAAGGATGGCCGATCTGGGGGGTGAAACTTTCTaGGTGGCTGCCTGTGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HRIEMDARTFHSPRMADLGGETF*VAACGF Trigger: AAAGCCACAGGCAGCCACCCAGAAAGTTTCACCCCC...CAGATCGGCCATCCTTGGACTATGAAATGTTCTGGCATCCATCTCTATCCTGTG 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | GGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGATGCAGGAGTTATGTaGATCAGCAATTTCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: GEDPGQHKWDEAAKIDHHDAGVM*ISNFSR Trigger: CCTGGAGAAATTGCTGATGCACATAACTCCTGCATC...GTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | ACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTTCCTCTGCCTGCCAGTTCAGCAGGTaGAAGCTCCACTTTGTCCTC | + |
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Preference number: 4 (lower is better) Translates to: TPAHAHIMKCLEASFSSACQFSR*KLHFVL Trigger: GAGGACAAAGTGGAGCTTCCACCTGCTGAACTGGCA...GGCAGAGGAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CAA 72 bp | CAGTCCACACCAGCCCATGCACATATCATGAAGTGTTaGGAAGCCTCTTTTTCCTCTGCCTGGGGTAAAGTC | + |
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Preference number: 4 (lower is better) Translates to: QSTPAHAHIMKC*EASFSSAWGKV Trigger: GACTTTACCCCAGGCAGAGGAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | CACAGGATAGAGATGGATGCCAGAACATTTCATAGTCCAAGGATGGCCGATCTGTGGGGGCTGAATCTGTaGTTGTCTGTGCCTTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: HRIEMDARTFHSPRMADLWGLNL*LSVPSV Trigger: TACAGAAGGCACAGACAAGCACAGATTCAGCCCCCA...CAGATCGGCCATCCTTGGACTATGAAATGTTCTGGCATCCATCTCTATCCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR TCA 90 bp | TACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGAAGTATCATGTAAAAATGTaGAGGCCGGGTTATCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: YPYSSCAQSTPAHAHIMKYHVKM*RPGYPC Trigger: ACAAGGATAACCCGGCCTTCACATTTTTACATGATA...CTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CCA 90 bp | GCCCAGTCCACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTCAACAGGCAGCTGTTTaGCATGTGAGTAGTTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AQSTPAHAHIMKCLEASFQQAAV*HVSSSS Trigger: TGAAGAACTACTCACATGCCAAACAGCTGCCTGTTG...AAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGTGGACTGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| 3UTR CAA 72 bp | GTACTCAGATTTATCATTCTTATTCTCTTGAGGACTTaGACTAGCTGGAGAGGTCTGGGGAGGATCCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: VLRFIILILLRT*TSWRGLGRIQG Trigger: GCCCTGGATCCTCCCCAGACCTCTCCAGCTAGTCAAAGTCCTCAAGAGAATAAGAATGATAAATCTGAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR GCA 90 bp | CTCAGATTTATCATTCTTATTCTCTTGAGGACTTTGACTAGCTGGAGAGGTCTGTGCATGGCGCGCTTGTaGTGCATAATCATGTCATAC | + |
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Preference number: 4 (lower is better) Translates to: LRFIILILLRTLTSWRGLCMARL*CIIMSY Trigger: GTATGACATGATTATGCAGCACAAGCGCGCCATGCA...CAGACCTCTCCAGCTAGTCAAAGTCCTCAAGAGAATAAGAATGATAAATCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | GCTCCAGCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGTCAAGGAGCTGGGTGTaGGCATGCTGGGAGGGGCCC | + |
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Preference number: 5 (lower is better) Translates to: APAGLLQLCSEQYMRQPRSRSWV*ACWEGP Trigger: GGGCCCCTCCCAGCATGCCAACACCCAGCTCCTTGA...CCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGCTGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | GCTCCAGCTGGGCTCTTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGATGGATGGAGTGGGGTaGACAGCAGGTGCTGGGGCC | + |
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Preference number: 5 (lower is better) Translates to: APAGLLQLCSEQYMRQPRMDGVG*TAGAGA Trigger: GGCCCCAGCACCTGCTGTCAACCCCACTCCATCCAT...CCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAAGAGCCCAGCTGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS TCA 90 bp | TCACAGGACCCGTTGGGCTACTCAGTCCCAGGCCTGTTCGCTTGCTaGGCACAAGGGGTTTCTTCAAGGAGCTGGGTGTTGGCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SQDPLGYSVPGLFAC*AQGVSSRSWVLACW Trigger: CCAGCATGCCAACACCCAGCTCCTTGAAGAAACCCCTTGTGCTCAGCAAGCGAACAGGCCTGGGACTGAGTAGCCCAACGGGTCCTGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | CTGGAGAGGTCTGGGGAGGATCCAGGGCAGCACAAATGGGATGAAGCTGCAAAGTCACCGATGAAGTGCTaGCCCCGACCCATCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LERSGEDPGQHKWDEAAKSPMKC*PRPICV Trigger: GACACAGATGGGTCGGGGCAAGCACTTCATCGGTGA...CTTTGCAGCTTCATCCCATTTGTGCTGCCCTGGATCCTCCCCAGACCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | TACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGAAGATAGCCATGCTGGTGTaGCTGCAGCGCCTTCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: YPYSSCAQSTPAHAHIMKIAMLV*LQRLLP Trigger: TGGGAGAAGGCGCTGCAGCAACACCAGCATGGCTAT...CTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CCA 90 bp | TTTCTCCAGGATGAGGGGGCTGTGGACTGGGCACATGACTCTGTCTaGCCTTTTGTTCCATTCTGGCCTCAATCTCCCGCTTCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: FLQDEGAVDWAHDSV*PFVPFWPQSPASSE Trigger: CTCAGAAGAAGCGGGAGATTGAGGCCAGAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTCATCCTGGAGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | GCAATACATGAGACAGCCCAGGCCTCTGCCTCTAGACAGGCCCTACCCATACTCTCTGGGGGTGAAACTTaGATTTCCAGCCACTGCTCA | + |
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Preference number: 5 (lower is better) Translates to: AIHETAQASASRQALPILSGGET*ISSHCS Trigger: TGAGCAGTGGCTGGAAATCAAAGTTTCACCCCCAGA...GAGTATGGGTAGGGCCTGTCTAGAGGCAGAGGCCTGGGCTGTCTCATGTATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | CCCTACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGAGGAAGCTGCCATCATaGGCAAACTTGTTGGAGATG | + |
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Preference number: 5 (lower is better) Translates to: PYPYSSCAQSTPAHAHIMRKLPS*ANLLEM Trigger: CATCTCCAACAAGTTTGCCAATGATGGCAGCTTCCT...CATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | AGCACAAATGGGATGAAGCTGCAAAGATTGACCATCACGGGCTCCAGCTGGGCTGGGCTGAATCTGTGCTaGTCTGTGCCTTCTGTAACT | + |
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Preference number: 5 (lower is better) Translates to: STNGMKLQRLTITGSSWAGLNLC*SVPSVT Trigger: AGTTACAGAAGGCACAGACAAGCACAGATTCAGCCC...AGCCCAGCTGGAGCCCGTGATGGTCAATCTTTGCAGCTTCATCCCATTTGTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CCA 90 bp | AGTTATGTGCATCAGCAATTTCTCCAGGATGAGGGGGCTGTGGACTaGGCACATGACTCTGTCTGGCCTTTTGTTCCATTCTGGCCTCAA | + |
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Preference number: 5 (lower is better) Translates to: SYVHQQFLQDEGAVD*AHDSVWPFVPFWPQ Trigger: TTGAGGCCAGAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTCATCCTGGAGAAATTGCTGATGCACATAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGCTATGCAGTGAGCAATACATGAGACAGCCCAGGCCTCTGCCTCTAGACACTCTGTCTGGCCTTTaGTTCCATTCTGGCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: LQLCSEQYMRQPRPLPLDTLSGL*FHSGLN Trigger: ATTGAGGCCAGAATGGAACAAAAGGCCAGACAGAGT...GTCTAGAGGCAGAGGCCTGGGCTGTCTCATGTATTGCTCACTGCATAGCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | TACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGAAGGTAGTATCTGTACCCTaGGCTGTTGGGATCATAGAG | + |
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Preference number: 5 (lower is better) Translates to: YPYSSCAQSTPAHAHIMKVVSVP*AVGIIE Trigger: CTCTATGATCCCAACAGCCAAGGGTACAGATACTAC...CTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | CACAGGATAGAGATGGATGCCAGAACATTTCATAGTCCAAGGATGGCCGATCTGATCCCAAACCACCGATaGGCCTTTCCTGCAACATCC | + |
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Preference number: 5 (lower is better) Translates to: HRIEMDARTFHSPRMADLIPNHR*AFPATS Trigger: GGATGTTGCAGGAAAGGCCAATCGGTGGTTTGGGAT...CAGATCGGCCATCCTTGGACTATGAAATGTTCTGGCATCCATCTCTATCCTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | TACCCATACTCCAGCTGTGCCCAGTCCACACCAGCCCATGCACATATCATGAAGTCATTGGCAAACTTGTaGGAGATGCAGGAGTTATGT | + |
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Preference number: 5 (lower is better) Translates to: YPYSSCAQSTPAHAHIMKSLANL*EMQELC Trigger: ACATAACTCCTGCATCTCCAACAAGTTTGCCAATGA...CTTCATGATATGTGCATGGGCTGGTGTGGACTGGGCACAGCTGGAGTATGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | ACACCAGCCCATGCACATATCATGAAGTGTTTGGAAGCCTCTTTTTCCTCTGCCCTTCAGCTGCTTCTTTaGTGCATCAGACAGCTCTGT | + |
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Preference number: 5 (lower is better) Translates to: TPAHAHIMKCLEASFSSALQLLL*CIRQLC Trigger: ACAGAGCTGTCTGATGCACAAAAGAAGCAGCTGAAG...GGCAGAGGAAAAAGAGGCTTCCAAACACTTCATGATATGTGCATGGGCTGGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS-3UTR CAA 90 bp | CTCAGATTTATCATTCTTATTCTCTTGAGGACTTTGACTAGCTGGAGAGGTCTGGGCTGCCTGTGGCTTTaGGGCTTCTTTCCTGATCTC | + |
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Preference number: 5 (lower is better) Translates to: LRFIILILLRTLTSWRGLGCLWL*GFFPDL Trigger: GAGATCAGGAAAGAAGCCCAAAAGCCACAGGCAGCC...CAGACCTCTCCAGCTAGTCAAAGTCCTCAAGAGAATAAGAATGATAAATCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CAA 90 bp | TTCTTCACAGGACCCGTTGGGCTACTCAGTCCCAGGCCTGTTCGCTaGCTGAGCACAAGGGGTTTCTTCAAGGAGCTGGGTGTTGGCATG | + |
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Preference number: 6 (lower is better) Translates to: FFTGPVGLLSPRPVR*LSTRGFFKELGVGM Trigger: CATGCCAACACCCAGCTCCTTGAAGAAACCCCTTGTGCTCAGCAAGCGAACAGGCCTGGGACTGAGTAGCCCAACGGGTCCTGTGAAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CCA 72 bp | GATGAGGGGGCTGTGGACTGGGCACATGACTCTGTCTaGCCTTTTGTTCCATTCTGGCCTCAATCTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: DEGAVDWAHDSV*PFVPFWPQSPA Trigger: AGCGGGAGATTGAGGCCAGAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CAA 72 bp | GGGCTGTGGACTGGGCACATGACTCTGTCTGGCCTTTaGTTCCATTCTGGCCTCAATCTCCCGCTTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GLWTGHMTLSGL*FHSGLNLPLLL Trigger: CAGAAGAAGCGGGAGATTGAGGCCAGAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS CCA 72 bp | CATCAGCAATTTCTCCAGGATGAGGGGGCTGTGGACTaGGCACATGACTCTGTCTGGCCTTTTGTTCCATTC | + |
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Preference number: 6 (lower is better) Translates to: HQQFLQDEGAVD*AHDSVWPFVPF Trigger: GAATGGAACAAAAGGCCAGACAGAGTCATGTGCCCAGTCCACAGCCCCCTCATCCTGGAGAAATTGCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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| CDS GCA 72 bp | TCCCACAGAAGCTGCATGTCTTGCATGGCGCGCTTGTaGTGCATAATCATGTCATACATCTGCTGCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SHRSCMSCMARL*CIIMSYICCIS Trigger: GGAGATGCAGCAGATGTATGACATGATTATGCAGCACAAGCGCGCCATGCAAGACATGCAGCTTCTGTGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000011450.8 |
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