Pregenerated sensors for SUGCT (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055137Ensembl transcript IDs: ENSMUST00000068545.6, ENSMUST00000220514.2
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTTACAACAGCCTGTACCTCTAGCTCCAGGGAACTCACAGGCATaGTATCTCATGCCTGAATTCTCAGCACCTGAGAGGCTAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: GLQQPVPLAPGNSQA*YLMPEFSAPERLGQ Trigger: CTGCCCTAGCCTCTCAGGTGCTGAGAATTCAGGCATGAGATACCATGCCTGTGAGTTCCCTGGAGCTAGAGGTACAGGCTGTTGTAAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTCTCAGCACCTGAGAGGCTAGGGCAGAAGGACTGCCATGAGTTCAAGGTCAATTCCATTCCAGCCTaGGATACAAAGGGAAACCCT | + |
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Preference number: 2 (lower is better) Translates to: EFSAPERLGQKDCHEFKVNSIPA*DTKGNP Trigger: AGGGTTTCCCTTTGTATCCCAGGCTGGAATGGAATT...GACCTTGAACTCATGGCAGTCCTTCTGCCCTAGCCTCTCAGGTGCTGAGAATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR-3UTR TCA 90 bp | CAATGGCTTACAACAGCCTGTACCTCTAGCTCCAGGGAACTCACAGGCATGGTAACAGCCATGGCTACATaGAGAAACCCTGTCTTTAAT | + |
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Preference number: 2 (lower is better) Translates to: QWLTTACTSSSRELTGMVTAMAT*RNPVFN Trigger: ATTAAAGACAGGGTTTCTTCATGTAGCCATGGCTGT...TACCATGCCTGTGAGTTCCCTGGAGCTAGAGGTACAGGCTGTTGTAAGCCATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGTCTGGGCCAGCCAGCTaGAGTTTTCTGATGCATTCT | + |
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Preference number: 2 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMSGPAS*SFLMHS Trigger: AGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGA...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCACTAAAGCACACCAAAAACACATAAACATCTCACTACCAGAAAAAGAAGAAGCTGGCCTGGTCTaGAGAGTGAGTTCCAGGACA | + |
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Preference number: 2 (lower is better) Translates to: PVTKAHQKHINISLPEKEEAGLV*RVSSRT Trigger: TGTCCTGGAACTCACTCTGCAGACCAGGCCAGCTTC...TTCTTTTTCTGGTAGTGAGATGTTTATGTGTTTTTGGTGTGCTTTAGTGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGTCACTAAAGCACACCAAAAACACATAAACATCTCACTACCAGAAAAAGAAGTTCCAGGACAGCCATaGCTACATGAAGAAACCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVTKAHQKHINISLPEKEVPGQP*LHEETL Trigger: CAGGGTTTCTTCATGTAGCCATGGCTGTCCTGGAAC...TTCTTTTTCTGGTAGTGAGATGTTTATGTGTTTTTGGTGTGCTTTAGTGACAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR GCA 72 bp | CCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATaGACAGAGCACTCACTGTCTGGGCCAGCCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: PCFVVGSRLGKA*TEHSLSGPASC Trigger: GCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| 3UTR CCA 72 bp | AAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCTaGGCCAGCCAGCTGCAGTTTTCTGATGCATTCTCC | + |
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Preference number: 3 (lower is better) Translates to: KTGKGMHRALTV*ASQLQFSDAFS Trigger: GGAGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| 3UTR CCA 72 bp | GGGGAACAAGAGTTTAGCTCTAAGCACCCACACCAATaGCTTACAACAGCCTGTACCTCTAGCTCCAGGGAA | + |
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Preference number: 3 (lower is better) Translates to: GEQEFSSKHPHQ*LTTACTSSSRE Trigger: TTCCCTGGAGCTAGAGGTACAGGCTGTTGTAAGCCATTGGTGTGGGTGCTTAGAGCTAAACTCTTGTTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| 3UTR TCA 72 bp | GAGATCACACAATATACTATATCAATAACAGACAAGTaGAACCAGGACTTTAATCCCAGCACTCAGGAGGCA | + |
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Preference number: 3 (lower is better) Translates to: EITQYTISITDK*NQDFNPSTQEA Trigger: TGCCTCCTGAGTGCTGGGATTAAAGTCCTGGTTTCACTTGTCTGTTATTGATATAGTATATTGTGTGATCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| CDS-3UTR CCA 90 bp | AAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATTGGCGAGGTCAGTCATaGCCACTCCAGGGCGAACAG | + |
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Preference number: 4 (lower is better) Translates to: KGMHRALTVWASQLQFSDWRGQS*PLQGEQ Trigger: CTGTTCGCCCTGGAGTGGCCATGACTGACCTCGCCA...ATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | AGACTGGGAAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTGGCTGCAAGCTCTTTaGCGATTCTCACTCCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: RLGKACTEHSLSGPASCSWLQAL*RFSLLL Trigger: CAAGAGGAGTGAGAATCGTCAAAGAGCTTGCAGCCA...ACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATAGCTGGACCTGGGACTaGAATCTTCCCCACAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: KGMHRALTVWASQLQFSDSWTWD*NLPHSW Trigger: CCAACTGTGGGGAAGATTTCAGTCCCAGGTCCAGCT...ATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | GAATTCTCAGCACCTGAGAGGCTAGGGCAGAAGGACTGCCATGAGTTCAAGGTCTCAGATAAATCTCTGTaGGGTCAAGTCCAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: EFSAPERLGQKDCHEFKVSDKSL*GQVQPG Trigger: CCCTGGCTGGACTTGACCTCACAGAGATTTATCTGA...GACCTTGAACTCATGGCAGTCCTTCTGCCCTAGCCTCTCAGGTGCTGAGAATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| CDS-3UTR GCA 90 bp | CTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCAAGGATATGCCTTGTATaGTGTCCCAGCAGGGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: LLTMLCSRIKTGKGMHRARICLV*CPSRGG Trigger: ACCTCCCCTGCTGGGACAGCATACAAGGCATATCCT...TGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | AGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATGCATTCTCCTCTTTCCCCACAGTTGGATaGTTCATCTCCATAACAAGG | + |
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Preference number: 4 (lower is better) Translates to: RALTVWASQLQFSDAFSSFPTVG*FISITR Trigger: CCTTGTTATGGAGATGAATCATCCAACTGTGGGGAA...AGAGGAGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | CTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACCCCCTCATCATATCTaGGGACCTCCTTCAGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LLTMLCSRIKTGKGMHRAPPHHI*GPPSGY Trigger: ATATCCTGAAGGAGGTCCTCAGATATGATGAGGGGG...TGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | AGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATGCATTCTCCTCTTCAGGTCCTGTGATGTaGATTAGACCAGACATAGCA | + |
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Preference number: 4 (lower is better) Translates to: RALTVWASQLQFSDAFSSSGPVM*IRPDIA Trigger: TGCTATGTCTGGTCTAATGCACATCACAGGACCTGA...AGAGGAGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGTACTGCCATGAGCTGTaGCCCAGCGTTTCGCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMYCHEL*PSVSLP Trigger: AGGAAGCGAAACGCTGGGGCACAGCTCATGGCAGTA...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | AAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATCACTTGGTTTCATGTTaGTCTATCACACCAGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: KGMHRALTVWASQLQFSDHLVSC*SITPEQ Trigger: CTGCTCTGGTGTGATAGAGCAACATGAAACCAAGTG...ATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCTGCTCTGTGAGACATaGGCCCTGTCTGGCCATATC | + |
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Preference number: 4 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMLLCET*ALSGHI Trigger: GATATGGCCAGACAGGGCCCATGTCTCACAGAGCAG...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | ATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCCATCCTCAGGTCCTGTaGTGTGCATTAGACCAGACA | + |
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Preference number: 4 (lower is better) Translates to: MLCSRIKTGKGMHRALTVHPQVL*CALDQT Trigger: TGTCTGGTCTAATGCACATCACAGGACCTGAGGATG...GACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | CTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCCTAAATTCATCGTaGCAAAGGGTCCTGCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: LLTMLCSRIKTGKGMHRALLNSS*QRVLPV Trigger: TACTGGCAGGACCCTTTGCCACGATGAATTTAGGAG...TGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | AAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATGCAGATTACAATCAATaGACAGTCCTTTTCCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: KGMHRALTVWASQLQFSDADYNQ*TVLFQF Trigger: GAACTGGAAAAGGACTGTTCATTGATTGTAATCTGC...ATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR TCA 90 bp | GTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGACAATACCTGGGCTTCTaGAAACACATCCTTCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLLTMLCSRIKTGKGMHRQYLGF*KHILQA Trigger: AGCCTGAAGGATGTGTTTTCAGAAGCCCAGGTATTG...TCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | AGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATGCATTCTCCTCTGTCATCACCAGCTCCTaGTCTTTCAACTTTTATAAC | + |
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Preference number: 4 (lower is better) Translates to: RALTVWASQLQFSDAFSSVITSS*SFNFYN Trigger: GTTATAAAAGTTGAAAGACCAGGAGCTGGTGATGAC...AGAGGAGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | ATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCAGAGACAAAGCCACTTaGCAGTCACTTCTTCTGCAA | + |
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Preference number: 4 (lower is better) Translates to: MLCSRIKTGKGMHRALTVRDKAT*QSLLLQ Trigger: TTGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCT...GACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | GTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAATAACAAGGCCATTGTaGAATACCTGGGCTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: VLLTMLCSRIKTGKGMHRITRPL*NTWASE Trigger: TTCAGAAGCCCAGGTATTGCACAATGGCCTTGTTAT...TCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | CTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCAAATCTTCCCCACAGTTaGATGATTCATCTCCATAAC | + |
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Preference number: 4 (lower is better) Translates to: LLTMLCSRIKTGKGMHRANLPHS*MIHLHN Trigger: GTTATGGAGATGAATCATCCAACTGTGGGGAAGATT...TGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | CTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCAGCAAATTCAAGATCTTaGATACCACAGCAAACTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLTMLCSRIKTGKGMHRAANSRS*IPQQTV Trigger: AACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGC...TGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CCA 90 bp | GTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGATTCTGTACCCGAAGATaGTTCGTTCTATACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLLTMLCSRIKTGKGMHRFCTRR*FVLYLQ Trigger: TTGCAAGTATAGAACGAACCATCTTCGGGTACAGAA...TCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR GCA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCTGTTGGTTATTTCCTaGTCCAATTACAAGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMLLVIS*SNYKIA Trigger: GGCTATCTTGTAATTGGAGCAGGAAATAACCAACAG...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| 3UTR CAA 72 bp | TGTGACGCCAAATTAACAGATCTTCTTACAATCATTTaGAAACATACACAGCATAATGCACAAGAAAACCGA | + |
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Preference number: 4 (lower is better) Translates to: CDAKLTDLLTII*KHTQHNAQENR Trigger: TCGGTTTTCTTGTGCATTATGCTGTGTATGTTTCAAAATGATTGTAAGAAGATCTGTTAATTTGGCGTCACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| CDS GCA 90 bp | CTCTGTGAGGTCAAGTCCAGCCAGGGATACATAGGAGACCCTGACTaGGGGCGGCCGGTCCACAGCCCCCTCCCGCCGGCCAGGCCTCGG | + |
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Preference number: 5 (lower is better) Translates to: LCEVKSSQGYIGDPD*GRPVHSPLPPARPR Trigger: CCGAGGCCTGGCCGGCGGGAGGGGGCTGTGGACCGGCCGCCCGCAGTCAGGGTCTCCTATGTATCCCTGGCTGGACTTGACCTCACAGAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| CDS TCA 90 bp | ATCCAGAATTCTCACACCCTCCAGGGGCTTCATACTGTCACAATCTaGCTGCGGGCGGCCGGTCCACAGCCCCCTCCCGCCGGCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: IQNSHTLQGLHTVTI*LRAAGPQPPPAGQA Trigger: GGCCTGGCCGGCGGGAGGGGGCTGTGGACCGGCCGCCCGCAGTCAGATTGTGACAGTATGAAGCCCCTGGAGGGTGTGAGAATTCTGGAT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 90 bp | TTCTCAATAGCCCCCTCATCATATCTGAGGACCTCCTTCAGGATATaGCTTGTATGCTGTCCCAGCAGGGGAGGTGGCTTTGCCTCTGAC | + |
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Preference number: 5 (lower is better) Translates to: FSIAPSSYLRTSFRI*LVCCPSRGGGFASD Trigger: GTCAGAGGCAAAGCCACCTCCCCTGCTGGGACAGCATACAAGGCATATCCTGAAGGAGGTCCTCAGATATGATGAGGGGGCTATTGAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | GACTGGGAAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTTGCCTCTGACATCTaGAACTTGCTGTATCTCACA | + |
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Preference number: 5 (lower is better) Translates to: DWERHAQSTHCLGQPAAVFASDI*NLLYLT Trigger: TGTGAGATACAGCAAGTTCAAGATGTCAGAGGCAAA...AACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACCCTTCAGGATATGCCTaGTATGCTGTCCCAGCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSPCFVVGSRLGKACTEHPSGYA*YAVPAG Trigger: CCCTGCTGGGACAGCATACAAGGCATATCCTGAAGG...GTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | AAAGGCATGCACAGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATAAGAGACAAAGCCACTaGGCAGTCACTTCTTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: KGMHRALTVWASQLQFSDKRQSH*AVTSSA Trigger: TGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCTT...ATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCTGTGCATGCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | AGAGCACTCACTGTCTGGGCCAGCCAGCTGCAGTTTTCTGATGCATTCTCCTCTATAATTAGCAGCTACTaGGGTCAAACATGCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: RALTVWASQLQFSDAFSSIISSY*GQTCHL Trigger: CAGGTGGCATGTTTGACCCAAGTAGCTGCTAATTAT...AGAGGAGAATGCATCAGAAAACTGCAGCTGGCTGGCCCAGACAGTGAGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | GTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAATGGCTGCAAGCTCTTaGACGATTCTCACTCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: VLLTMLCSRIKTGKGMHRMAASS*TILTPL Trigger: AAGAGGAGTGAGAATCGTCAAAGAGCTTGCAGCCAT...TCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | GTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGATCCATAACAAGGCCATaGTGCAATACCTGGGCTTCT | + |
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Preference number: 5 (lower is better) Translates to: VLLTMLCSRIKTGKGMHRSITRP*CNTWAS Trigger: AGAAGCCCAGGTATTGCACAATGGCCTTGTTATGGA...TCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS TCA 90 bp | CATTGTGCAATACCTGGGCTTCTGAAAACACATCCTTCAGGCTGTTaGTTGGTCCATATGGGATCCCACTTCCTTCAAAGAGACAAAGCC | + |
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Preference number: 5 (lower is better) Translates to: HCAIPGLLKTHPSGC*LVHMGSHFLQRDKA Trigger: GGCTTTGTCTCTTTGAAGGAAGTGGGATCCCATATGGACCAATCAACAGCCTGAAGGATGTGTTTTCAGAAGCCCAGGTATTGCACAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCTCTGACATCTTGAACTaGCTGTATCTCACAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: MLCSRIKTGKGMHRALTVSDILN*LYLTAG Trigger: TCCAGCTGTGAGATACAGCAAGTTCAAGATGTCAGA...GACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS TCA 90 bp | CTTGGGTCAAACATGCCACCTGTGATGACAGCAGATTACAATCAATaGACAGTCCTTTTCCAGTTCTATAACGTTGTAGGAGGCCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: LGSNMPPVMTADYNQ*TVLFQFYNVVGGQP Trigger: TGGCTGGCCTCCTACAACGTTATAGAACTGGAAAAGGACTGTTCATTGATTGTAATCTGCTGTCATCACAGGTGGCATGTTTGACCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CCA 90 bp | TTGGTCCATATGGGATCCCACTTCCTTCAAAGAGACAAAGCCACTTaGCAGTCACTTCTTCTGCAAACCGTGCTGAAAGGATTTTCACAA | + |
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Preference number: 5 (lower is better) Translates to: LVHMGSHFLQRDKAT*QSLLLQTVLKGFSQ Trigger: TTGTGAAAATCCTTTCAGCACGGTTTGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCTTTGAAGGAAGTGGGATCCCATATGGACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGGTCCTGCCAGTACTCTaGTTAGATCCAGAATTCTCA | + |
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Preference number: 5 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMVLPVL*LDPEFS Trigger: TGAGAATTCTGGATCTAACAAGAGTACTGGCAGGAC...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | TCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACGCGTTTCGCTTCCTTTaGTCCAATAAGATAATTAGC | + |
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Preference number: 5 (lower is better) Translates to: SSPCFVVGSRLGKACTEHAFRFL*SNKIIS Trigger: GCTAATTATCTTATTGGACAAAAGGAAGCGAAACGC...GTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCGGCAAATTCAAGATCTaGCATACCACAGCAAACTGT | + |
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Preference number: 5 (lower is better) Translates to: MLCSRIKTGKGMHRALTVGKFKI*HTTANC Trigger: ACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCC...GACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | TCTGTAGTTCTCCTCACCATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGTACCACAGCAAACTGTaGGTTATTTCCTGCTCCAAT | + |
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Preference number: 5 (lower is better) Translates to: SVVLLTMLCSRIKTGKGMYHSKL*VISCSN Trigger: ATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTA...CATGCCTTTCCCAGTCTTGATCCTACTACAAAGCATGGTGAGGAGAACTACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS TCA 90 bp | AAAGAGACAAAGCCACTTGGCAGTCACTTCTTCTGCAAACCGTGCTaGAAGGATTTTCACAAGCTCTTTTCTATTCTGTACCCGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: KETKPLGSHFFCKPC*KDFHKLFSILYPKM Trigger: CATCTTCGGGTACAGAATAGAAAAGAGCTTGTGAAAATCCTTTCAGCACGGTTTGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS-3UTR CAA 90 bp | ATGCTTTGTAGTAGGATCAAGACTGGGAAAGGCATGCACAGAGCACTCACTGTCACTCCTCTTGGATCCTaGATATTAACAGCTATACTT | + |
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Preference number: 5 (lower is better) Translates to: MLCSRIKTGKGMHRALTVTPLGS*ILTAIL Trigger: AAGTATAGCTGTTAATATCAAGGATCCAAGAGGAGT...GACAGTGAGTGCTCTGTGCATGCCTTTCCCAGTCTTGATCCTACTACAAAGCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 90 bp | CAAGCTCTTTTCTATTCTGTACCCGAAGATGGTTCGTTCTATACTTaGAATCATCGATCAGTTCAGGCAAATTCAAGATCTTGCATACCA | + |
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Preference number: 5 (lower is better) Translates to: QALFYSVPEDGSFYT*NHRSVQANSRSCIP Trigger: TGGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAACGAACCATCTTCGGGTACAGAATAGAAAAGAGCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CCA 90 bp | GCTGAAAGGATTTTCACAAGCTCTTTTCTATTCTGTACCCGAAGATaGTTCGTTCTATACTTGCAATCATCGATCAGTTCAGGCAAATTC | + |
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Preference number: 5 (lower is better) Translates to: AERIFTSSFLFCTRR*FVLYLQSSISSGKF Trigger: GAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAACGAACCATCTTCGGGTACAGAATAGAAAAGAGCTTGTGAAAATCCTTTCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 90 bp | CAAATTCAAGATCTTGCATACCACAGCAAACTGTTGGTTATTTCCTaGTCCAATTACAAGATAGCCATCCTTGGTTTTAAAAGCCTGATA | + |
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Preference number: 5 (lower is better) Translates to: QIQDLAYHSKLLVIS*SNYKIAILGFKSLI Trigger: TATCAGGCTTTTAAAACCAAGGATGGCTATCTTGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 90 bp | TTCTATACTTGCAATCATCGATCAGTTCAGGCAAATTCAAGATCTTaGATACCACAGCAAACTGTTGGTTATTTCCTGCTCCAATTACAA | + |
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Preference number: 5 (lower is better) Translates to: FYTCNHRSVQANSRS*IPQQTVGYFLLQLQ Trigger: TTGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 72 bp | GTCAAGTCCAGCCAGGGATACATAGGAGACCCTGACTaGGGGCGGCCGGTCCACAGCCCCCTCCCGCCGGCC | + |
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Preference number: 6 (lower is better) Translates to: VKSSQGYIGDPD*GRPVHSPLPPA Trigger: GGCCGGCGGGAGGGGGCTGTGGACCGGCCGCCCGCAGTCAGGGTCTCCTATGTATCCCTGGCTGGACTTGAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220514.2 |
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| CDS TCA 72 bp | TCTCACACCCTCCAGGGGCTTCATACTGTCACAATCTaGCTGCGGGCGGCCGGTCCACAGCCCCCTCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SHTLQGLHTVTI*LRAAGPQPPPA Trigger: GGCGGGAGGGGGCTGTGGACCGGCCGCCCGCAGTCAGATTGTGACAGTATGAAGCCCCTGGAGGGTGTGAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CCA 72 bp | CCCCATAAGCAAAAAGACCAGTGGCGAGGTCAGTCATaGCCACTCCAGGGCGAACAGGATCTCCATCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PHKQKDQWRGQS*PLQGEQDLHPQ Trigger: CTGAGGATGGAGATCCTGTTCGCCCTGGAGTGGCCATGACTGACCTCGCCACTGGTCTTTTTGCTTATGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 72 bp | GGGCGAACAGGATCTCCATCCTCAGGTCCTGTGATGTaGATTAGACCAGACATAGCAGAAGCAATAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: GRTGSPSSGPVM*IRPDIAEAIAS Trigger: TGATGCTATTGCTTCTGCTATGTCTGGTCTAATGCACATCACAGGACCTGAGGATGGAGATCCTGTTCGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | CTAAATTCATCGTGGCAAAGGGTCCTGCCAGTACTCTaGTTAGATCCAGAATTCTCACACCCTCCAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: LNSSWQRVLPVL*LDPEFSHPPGA Trigger: AGCCCCTGGAGGGTGTGAGAATTCTGGATCTAACAAGAGTACTGGCAGGACCCTTTGCCACGATGAATTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CCA 72 bp | ATGGGATCCCACTTCCTTCAAAGAGACAAAGCCACTTaGCAGTCACTTCTTCTGCAAACCGTGCTGAAAGGA | + |
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Preference number: 6 (lower is better) Translates to: MGSHFLQRDKAT*QSLLLQTVLKG Trigger: TCCTTTCAGCACGGTTTGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCTTTGAAGGAAGTGGGATCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | TATGGGATCCCACTTCCTTCAAAGAGACAAAGCCACTaGGCAGTCACTTCTTCTGCAAACCGTGCTGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: YGIPLPSKRQSH*AVTSSANRAER Trigger: CCTTTCAGCACGGTTTGCAGAAGAAGTGACTGCCAAGTGGCTTTGTCTCTTTGAAGGAAGTGGGATCCCATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 90 bp | AGGAACAATACTGCCATGAGCTGTGCCCCAGCGTTTCGCTTCCTTTaGTCCAATAAGATAATTAGCAGCTACTTGGGTCAAACATGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RNNTAMSCAPAFRFL*SNKIISSYLGQTCH Trigger: GTGGCATGTTTGACCCAAGTAGCTGCTAATTATCTTATTGGACAAAAGGAAGCGAAACGCTGGGGCACAGCTCATGGCAGTATTGTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 90 bp | CCATTGTGCAATACCTGGGCTTCTGAAAACACATCCTTCAGGCTGTaGATTGGTCCATATGGGATCCCACTTCCTTCAAAGAGACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: PLCNTWASENTSFRL*IGPYGIPLPSKRQS Trigger: GCTTTGTCTCTTTGAAGGAAGTGGGATCCCATATGGACCAATCAACAGCCTGAAGGATGTGTTTTCAGAAGCCCAGGTATTGCACAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | ACTGCCATGAGCTGTGCCCCAGCGTTTCGCTTCCTTTaGTCCAATAAGATAATTAGCAGCTACTTGGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: TAMSCAPAFRFL*SNKIISSYLGQ Trigger: TTGACCCAAGTAGCTGCTAATTATCTTATTGGACAAAAGGAAGCGAAACGCTGGGGCACAGCTCATGGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS TCA 72 bp | CTCCATAACAAGGCCATTGTGCAATACCTGGGCTTCTaGAAACACATCCTTCAGGCTGTTGATTGGTCCATA | + |
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Preference number: 6 (lower is better) Translates to: LHNKAIVQYLGF*KHILQAVDWSI Trigger: TATGGACCAATCAACAGCCTGAAGGATGTGTTTTCAGAAGCCCAGGTATTGCACAATGGCCTTGTTATGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | AATACCTGGGCTTCTGAAAACACATCCTTCAGGCTGTaGATTGGTCCATATGGGATCCCACTTCCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: NTWASENTSFRL*IGPYGIPLPSK Trigger: CTTTGAAGGAAGTGGGATCCCATATGGACCAATCAACAGCCTGAAGGATGTGTTTTCAGAAGCCCAGGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 72 bp | TGCAATCATCGATCAGTTCAGGCAAATTCAAGATCTTaGATACCACAGCAAACTGTTGGTTATTTCCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: CNHRSVQANSRS*IPQQTVGYFLL Trigger: GAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 90 bp | GATCAGTTCAGGCAAATTCAAGATCTTGCATACCACAGCAAACTGTaGGTTATTTCCTGCTCCAATTACAAGATAGCCATCCTTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: DQFRQIQDLAYHSKL*VISCSNYKIAILGF Trigger: AAAACCAAGGATGGCTATCTTGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCTGAACTGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 90 bp | ACAAGCTCTTTTCTATTCTGTACCCGAAGATGGTTCGTTCTATACTaGCAATCATCGATCAGTTCAGGCAAATTCAAGATCTTGCATACC | + |
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Preference number: 6 (lower is better) Translates to: TSSFLFCTRRWFVLY*QSSISSGKFKILHT Trigger: GGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAACGAACCATCTTCGGGTACAGAATAGAAAAGAGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | AGGCAAATTCAAGATCTTGCATACCACAGCAAACTGTaGGTTATTTCCTGCTCCAATTACAAGATAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: RQIQDLAYHSKL*VISCSNYKIAI Trigger: GATGGCTATCTTGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | TTGCAATCATCGATCAGTTCAGGCAAATTCAAGATCTaGCATACCACAGCAAACTGTTGGTTATTTCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LQSSISSGKFKI*HTTANCWLFPA Trigger: AGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 90 bp | GTTCTATACTTGCAATCATCGATCAGTTCAGGCAAATTCAAGATCTaGCATACCACAGCAAACTGTTGGTTATTTCCTGCTCCAATTACA | + |
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Preference number: 6 (lower is better) Translates to: VLYLQSSISSGKFKI*HTTANCWLFPAPIT Trigger: TGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 72 bp | GATCTTGCATACCACAGCAAACTGTTGGTTATTTCCTaGTCCAATTACAAGATAGCCATCCTTGGTTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: DLAYHSKLLVIS*SNYKIAILGFK Trigger: TTTAAAACCAAGGATGGCTATCTTGTAATTGGAGCAGGAAATAACCAACAGTTTGCTGTGGTATGCAAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS GCA 72 bp | TTCTATTCTGTACCCGAAGATGGTTCGTTCTATACTTaGAATCATCGATCAGTTCAGGCAAATTCAAGATCT | + |
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Preference number: 6 (lower is better) Translates to: FYSVPEDGSFYT*NHRSVQANSRS Trigger: AGATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAACGAACCATCTTCGGGTACAGAATAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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| CDS CAA 72 bp | TTTCTATTCTGTACCCGAAGATGGTTCGTTCTATACTaGCAATCATCGATCAGTTCAGGCAAATTCAAGATC | + |
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Preference number: 6 (lower is better) Translates to: FLFCTRRWFVLY*QSSISSGKFKI Trigger: GATCTTGAATTTGCCTGAACTGATCGATGATTGCAAGTATAGAACGAACCATCTTCGGGTACAGAATAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000068545.6 |
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