Pregenerated sensors for SUFU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025231Ensembl transcript IDs: ENSMUST00000039922.13, ENSMUST00000111867.9, ENSMUST00000118440.3, ENSMUST00000120778.8
Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTCTGCAGCTCACAAAGGTGCCTTCCCTGGGAGGCAGGAAGCTCTaGAGTCCTGGAGGTGACAGCATGGCACCCACAAGAGGGCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: PLQLTKVPSLGGRKL*SPGGDSMAPTRGPG Trigger: GCCTGGCCCTCTTGTGGGTGCCATGCTGTCACCTCCAGGACTGCAGAGCTTCCTGCCTCCCAGGGAAGGCACCTTTGTGAGCTGCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CCA 90 bp | CTTCCCTGGGAGGCAGGAAGCTCTGCAGTCCTGGAGGTGACAGCATaGCACCCACAAGAGGGCCAGGCTACAGGAAGAGACAGCGACGGG | + |
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Preference number: 1 (lower is better) Translates to: LPWEAGSSAVLEVTA*HPQEGQATGRDSDG Trigger: CCCGTCGCTGTCTCTTCCTGTAGCCTGGCCCTCTTGTGGGTGCCATGCTGTCACCTCCAGGACTGCAGAGCTTCCTGCCTCCCAGGGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CCA 90 bp | CCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCAGTaGAGGCAGGCAGAGCAGAGGAGCTCTTTTAAGGTTCCTGCCAGA | + |
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Preference number: 1 (lower is better) Translates to: PARVLKAPGGTRCRQ*RQAEQRSSFKVPAR Trigger: TCTGGCAGGAACCTTAAAAGAGCTCCTCTGCTCTGCCTGCCTCCACTGCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR GCA 90 bp | GGGTTCCCACTGTCACTGGCCGGCCATTCCACCAATGGCCAGAAGTaGAGTGCAGCTGTGAGGACAGCAGCACCCATACTCACAACCTCT | + |
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Preference number: 1 (lower is better) Translates to: GFPLSLAGHSTNGQK*SAAVRTAAPILTTS Trigger: AGAGGTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGTGGAATGGCCGGCCAGTGACAGTGGGAACCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR GCA 90 bp | GTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTaGAAAGGACTTGCCTTCCCCTCTCTGGGCCCCAGGAAAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: VSPKDYRTLRQAAEA*KGLAFPSLGPRKGR Trigger: CCTGCCTTTCCTGGGGCCCAGAGAGGGGAAGGCAAGTCCTTTGCAGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR TCA 90 bp | TTCCCCCAAAGGAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTaGGGTTGCCACACAGACTTCGTAGAGGGTAGGTGGATCACCCTA | + |
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Preference number: 1 (lower is better) Translates to: FPQRKALCIPNGPRA*GCHTDFVEGRWITL Trigger: TAGGGTGATCCACCTACCCTCTACGAAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTCCTTTGGGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR GCA 90 bp | AAAGGCACTTGCCAGTTCCAGGTCAGAAGTGGGAGCTCTCTCCTCTaGAGCTCACAAAGGTGCCTTCCCTGGGAGGCAGGAAGCTCTGCA | + |
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Preference number: 1 (lower is better) Translates to: KGTCQFQVRSGSSLL*SSQRCLPWEAGSSA Trigger: TGCAGAGCTTCCTGCCTCCCAGGGAAGGCACCTTTGTGAGCTGCAGAGGAGAGAGCTCCCACTTCTGACCTGGAACTGGCAAGTGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR GCA 90 bp | GAGGCCAGATCGAGCCATTCCTTCAAAGGCCAATTTCTGCTTCTTTaGGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTG | + |
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Preference number: 1 (lower is better) Translates to: EARSSHSFKGQFLLL*DPSQSSQGPWRHPL Trigger: CAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGGAATGGCTCGATCTGGCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR TCA 90 bp | CACTGGCCGGCCATTCCACCAATGGCCAGAAGTGCAGTGCAGCTGTaGGGACAGCAGCACCCATACTCACAACCTCTATATCCAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: HWPAIPPMARSAVQL*GQQHPYSQPLYPRG Trigger: GCCTCTTGGATATAGAGGTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGTGGAATGGCCGGCCAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR GCA 90 bp | CCCACTGTCACTGGCCGGCCATTCCACCAATGGCCAGAAGTGCAGTaGAGCTGTGAGGACAGCAGCACCCATACTCACAACCTCTATATC | + |
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Preference number: 1 (lower is better) Translates to: PTVTGRPFHQWPEVQ*SCEDSSTHTHNLYI Trigger: GATATAGAGGTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGTGGAATGGCCGGCCAGTGACAGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR TCA 90 bp | GTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTGGAGCAGCCTaGCTGAGGGAAAGCTGGCTGGGGTTGACCAGGCAGTGCGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VSTRKRTIIRQGGAA*LRESWLGLTRQCVL Trigger: GAGGACGCACTGCCTGGTCAACCCCAGCCAGCTTTCCCTCAGTCAGGCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR TCA 90 bp | CTGAGGTTCCTGACAGGGTGGAAGCAGGAAAGACCTCTGGGCCTGTaGACATCTAGAGCTTACCTGCCATTCCCTGCTCCCCAAGAATGG | + |
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Preference number: 1 (lower is better) Translates to: LRFLTGWKQERPLGL*TSRAYLPFPAPQEW Trigger: CCATTCTTGGGGAGCAGGGAATGGCAGGTAAGCTCTAGATGTTCACAGGCCCAGAGGTCTTTCCTGCTTCCACCCTGTCAGGAACCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR GCA 90 bp | ATGCAGATGAGGCCAGATCGAGCCATTCCTTCAAAGGCCAATTTCTaGTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: MQMRPDRAIPSKANF*FFATPARVLKAPGG Trigger: GCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGGAATGGCTCGATCTGGCCTCATCTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CCA 90 bp | AGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTaGTGTCTGCTCCAGACAGGCTTTCTATCTGGCTGGCTGGGTCTG | + |
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Preference number: 1 (lower is better) Translates to: RVWLEMSLWKVPRAV*CLLQTGFLSGWLGL Trigger: CAGACCCAGCCAGCCAGATAGAAAGCCTGTCTGGAGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR GCA 90 bp | ATCAGCCGTGATCCATGCTCAGAGCAGGAGAACGGGAGAACTGAGTaGTGGACAAGCCATCAGGTTCTGCTCAATGGTTTCCATCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: ISRDPCSEQENGRTE*WTSHQVLLNGFHQE Trigger: CTCCTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCCGTTCTCCTGCTCTGAGCATGGATCACGGCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR CCA 90 bp | ATACCATCCGGTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTaGAGCAGCCTGACTGAGGGAAAGCTGGCTGGGGTTGACCAGGCA | + |
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Preference number: 1 (lower is better) Translates to: IPSGFHKKKNNHSAG*SSLTEGKLAGVDQA Trigger: TGCCTGGTCAACCCCAGCCAGCTTTCCCTCAGTCAGGCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAACCGGATGGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR TCA 90 bp | AGTAAGGGCAGTCTTGTTTCATCCGATGTGGTGAACCTCTTTCCCTaGGATTTCTCTGGAAGAAACCAGAGCCCCAGGGAAAGGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SKGSLVSSDVVNLFP*DFSGRNQSPRERRP Trigger: AGGCCTCCTTTCCCTGGGGCTCTGGTTTCTTCCAGAGAAATCTCAGGGAAAGAGGTTCACCACATCGGATGAAACAAGACTGCCCTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CCA 90 bp | CTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTaGACTCTCTTCTGTTCACACAGCCCATGTAAATATTTACTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LPQGSQALSQISVPT*TLFCSHSPCKYLLL Trigger: CAGCAGTAAATATTTACATGGGCTGTGTGAACAGAAGAGAGTCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR GCA 90 bp | GCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTATAATTCTTTaGCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACA | + |
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Preference number: 1 (lower is better) Translates to: AQTPDWAIHKASIIL*LFTVTPACFLLHTT Trigger: TGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR GCA 90 bp | CAACCTGGACTCTCTTCTGTTCACACAGCCCATGTAAATATTTACTaGTGTTTGTACTCATGGTCTGCAGAGTCCCCTTTGAGGTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: QPGLSSVHTAHVNIY*CLYSWSAESPLRSF Trigger: AAAGGACCTCAAAGGGGACTCTGCAGACCATGAGTACAAACAGCAGTAAATATTTACATGGGCTGTGTGAACAGAAGAGAGTCCAGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR TCA 90 bp | GCCAGACAACATATCTTTCCTTTGGAGACATTTGAATCTAAAGAATaGACAAAGACCATTGACCTAGAGGCAGGCAGGCAAGAATGCAGG | + |
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Preference number: 1 (lower is better) Translates to: ARQHIFPLETFESKE*TKTIDLEAGRQECR Trigger: CCTGCATTCTTGCCTGCCTGCCTCTAGGTCAATGGTCTTTGTTCATTCTTTAGATTCAAATGTCTCCAAAGGAAAGATATGTTGTCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR GCA 90 bp | CACAAAGCCAGTATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTaGTTTCTCTTACACACCACAGACAGAGCTTGGTTCCCTTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: HKASIILCLFTVTPA*FLLHTTDRAWFPFG Trigger: TCCAAAAGGGAACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR-3UTR CCA 90 bp | GAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCCCACACAGAGGTGGGTGGGGCCTaGGATGGGTGTGGCACTCTG | + |
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Preference number: 2 (lower is better) Translates to: EHVSPAWQPALPPSAAHTEVGGA*DGCGTL Trigger: CAGAGTGCCACACCCATCCCAGGCCCCACCCACCTC...TGTGTGGGCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR GCA 90 bp | AAAGGAGGAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCCTGGCTGGCTGGGTCTaGAGCCAGCCTCTCGGATGC | + |
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Preference number: 2 (lower is better) Translates to: KGGTCFTSMAAGTATLGSLAGWV*SQPLGC Trigger: GCATCCGAGAGGCTGGCTGCAGACCCAGCCAGCCAG...GCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTCCTCCTTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAGGAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCAGACAGCCCAGGGGCTaGGACTCCAAGGGAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: KGGTCFTSMAAGTATLGSRQPRG*DSKGGG Trigger: TCCCCCTCCCTTGGAGTCCCAGCCCCTGGGCTGTCT...GCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTCCTCCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR GCA 90 bp | ACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCAGTGGAGGTGCAGCTCACAAAGGTaGCTTCCCTGGGAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: TPARVLKAPGGTRCRQWRCSSQR*LPWEAG Trigger: TCCTGCCTCCCAGGGAAGGCACCTTTGTGAGCTGCA...CCTCCACTGCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACTTGCCTTCCCCTCTCTaGGCCCCAGGAAAGGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: PKEGPVHPKWPQGLRLPHLPSPL*APGKAG Trigger: GCCTGCCTTTCCTGGGGCCCAGAGAGGGGAAGGCAA...GTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTCCTTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGAGGAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCAGGGTGGGGAAAGGCTaGGGAAGTCTGTGGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KGGTCFTSMAAGTATLGSRVGKG*GSLWSQ Trigger: CTGGCTCCACAGACTTCCTCAGCCTTTCCCCACCCT...GCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTCCTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACAGACTTGGCCTGCAAAGGACTTaGCTTCCCCTCTCTGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: EGPVHPKWPQGLRLPHRLGLQRT*LPLSGP Trigger: GGGCCCAGAGAGGGGAAGGCAAGTCCTTTGCAGGCC...AAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACAGACTTCAGGCAGCAGAGGCCTaGAAAGGACTTGCCTTCCCC | + |
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Preference number: 2 (lower is better) Translates to: EGPVHPKWPQGLRLPHRLQAAEA*KGLAFP Trigger: GGGGAAGGCAAGTCCTTTGCAGGCCTCTGCTGCCTG...AAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACAGACTTCCTCAGCAGCAGGCATaGAACTCAGGGCTAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: EGPVHPKWPQGLRLPHRLPQQQA*NSGLAR Trigger: TCTGGCTAGCCCTGAGTTGCATGCCTGCTGCTGAGG...AAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTTGTAGGACAGGGGCCTaGTCACTCGGGCTGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SKANFCFFATPARVLKAPCRTGA*SLGLGC Trigger: GCAGCCCAGCCCGAGTGACCAGGCCCCTGTCCTACA...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | AAAGGAGGAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCGTTCCAGGTCAGAAGTaGGAGCTCTCTCCTCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: KGGTCFTSMAAGTATLGSVPGQK*ELSPLQ Trigger: CTGCAGAGGAGAGAGCTCCCACTTCTGACCTGGAAC...GCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTCCTCCTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCTGCTCCAGGAGCACAACAGTaGGACCTGTGGCAGCAGCGG | + |
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Preference number: 2 (lower is better) Translates to: SMAGDVLVESSQGSVVSAPGAQQ*DLWQQR Trigger: CCGCTGCTGCCACAGGTCTCACTGTTGTGCTCCTGG...AGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCTGCTCAGGGTGGAGCAGCCTaGCTGAGGGAAAGCTGGCTG | + |
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Preference number: 2 (lower is better) Translates to: SMAGDVLVESSQGSVVSAQGGAA*LRESWL Trigger: CAGCCAGCTTTCCCTCAGTCAGGCTGCTCCACCCTG...AGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR TCA 90 bp | CACAAGAGGGCCAGGCTACAGGAAGAGACAGCGACGGGAGATGGGGACAGAATGGTGTCCTTGAGTCCCTaGAGTCCCCAGAGCCTTGTA | + |
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Preference number: 2 (lower is better) Translates to: HKRARLQEETATGDGDRMVSLSP*SPQSLV Trigger: TACAAGGCTCTGGGGACTTCAGGGACTCAAGGACAC...CATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCCTGTAGCCTGGCCCTCTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCATCTCTACCCAGGGCTaGATGGAGTATGTCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLRPQPEFSRPLEAPVVGISTQG*MEYVSC Trigger: ACAGCTGACATACTCCATGCAGCCCTGGGTAGAGAT...GCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | CCAAAGGAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACTGCAATCCTCAGGGATaGCCCCTCGAGAAAAACACC | + |
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Preference number: 2 (lower is better) Translates to: PKEGPVHPKWPQGLRLPHCNPQG*PLEKNT Trigger: GGTGTTTTTCTCGAGGGGCCATCCCTGAGGATTGCA...GTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTCCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR TCA 90 bp | AGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCTGCTTCCAGGGTCCAGAGCTaGCAGGCAGCACCAAGCATC | + |
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Preference number: 2 (lower is better) Translates to: SMAGDVLVESSQGSVVSASRVQS*QAAPSI Trigger: GATGCTTGGTGCTGCCTGTCAGCTCTGGACCCTGGA...AGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR GCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGACACTCTTCCCCTCATaGAATCCTCAGGGATGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RGWLVSPKDYRTLRQAAETLFPS*NPQGWP Trigger: GGGCCATCCCTGAGGATTGCATGAGGGGAAGAGTGT...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR TCA 90 bp | GTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTAACTCTGACCCAGAGTaGGATAAGGAGGGGACTGGC | + |
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Preference number: 2 (lower is better) Translates to: VGWFLLRTTGPLDRQQRPNSDPE*DKEGTG Trigger: GCCAGTCCCCTCCTTATCTCACTCTGGGTCAGAGTT...AGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCAGTCATCCCCACACTTaGCCTTTTATTCATGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: SLRPQPEFSRPLEAPVVGSHPHT*PFIHGC Trigger: ACACCCATGAATAAAAGGGCAAGTGTGGGGATGACT...GCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | TCAGGTTCTCTCCCAGCTCTCAATCTCAAAACCCAAGCCCCGGCTCCAGGGTCTAGGTTCCTGACAGGGTaGAAGCAGGAAAGACCTCTG | + |
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Preference number: 2 (lower is better) Translates to: SGSLPALNLKTQAPAPGSRFLTG*KQERPL Trigger: CAGAGGTCTTTCCTGCTTCCACCCTGTCAGGAACCT...AGACCCTGGAGCCGGGGCTTGGGTTTTGAGATTGAGAGCTGGGAGAGAACCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR CCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGCGGCCATTCCACCAATaGCCAGAAGTGCAGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: HTHVKNSADPRLGNPQSQRPFHQ*PEVQCS Trigger: GCTGCACTGCACTTCTGGCCATTGGTGGAATGGCCG...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR-3UTR CCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGAGACAAGGAGGTCCCTaGGGTTGTAGCTATCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: RGWLVSPKDYRTLRQAAERQGGP*GCSYQP Trigger: TGGCTGATAGCTACAACCCCAGGGACCTCCTTGTCT...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCTGGAGGGTTTTCAGGTaGATCTCACCCCCTCACTGG | + |
|
Preference number: 2 (lower is better) Translates to: QEYGWRCPCGKFPGQCGVWRVFR*ISPPHW Trigger: CCAGTGAGGGGGTGAGATGCACCTGAAAACCCTCCA...GACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR GCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGCCCTTTGAGGTCCTTTaGTACAGTCCACAGATCCGT | + |
|
Preference number: 2 (lower is better) Translates to: RGWLVSPKDYRTLRQAAEPFEVL*YSPQIR Trigger: ACGGATCTGTGGACTGTAGCAAAGGACCTCAAAGGG...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGACAGCGACGGGAGATaGGGACAGAATGGATGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SKANFCFFATPARVLKAPDSDGR*GQNGCE Trigger: CTCACATCCATTCTGTCCCCATCTCCCGTCGCTGTC...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CCA 90 bp | AGATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATAGCTCACTTCCTATGTaGGGGGCTCTGCTGCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: RSPCLCLPSAGIKVGYQHSSLPM*GALLPT Trigger: GGTGGGCAGCAGAGCCCCCCACATAGGAAGTGAGCT...ATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTTGCAGGAAAGGCACTTaGCAGTTCCAGGTCAGAAGT | + |
|
Preference number: 2 (lower is better) Translates to: SKANFCFFATPARVLKAPCRKGT*QFQVRS Trigger: ACTTCTGACCTGGAACTGGCAAGTGCCTTTCCTGCA...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGCCCACCCTCCACTCTTaGATCTTGATTTCCCAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: HTHVKNSADPRLGNPQSQPTLHS*ILISQS Trigger: ACTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGG...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATAATCAGCCGTGATCCATaGTCAGAGCAGGAGAACGGG | + |
|
Preference number: 2 (lower is better) Translates to: DLPVSASQVLGLKLGINIISRDP*SEQENG Trigger: CCCGTTCTCCTGCTCTGAGCATGGATCACGGCTGAT...TATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR CCA 90 bp | AACACTAACTCTGTGATGTGGTGCTCAGAGCATGCATTCCTGCCCCCAGGCCAGGAGACTTACTTCGCTTaGAAGGCAATAGCACACCTT | + |
|
Preference number: 2 (lower is better) Translates to: NTNSVMWCSEHAFLPPGQETYFA*KAIAHL Trigger: AAGGTGTGCTATTGCCTTCCAAGCGAAGTAAGTCTC...CTGGCCTGGGGGCAGGAATGCATGCTCTGAGCACCACATCACAGAGTTAGTGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CAA 90 bp | GTAAATATTTACTGCTGTTTGTACTCATGGTCTGCAGAGTCCCCTTaGAGGTCCTTTGCTACAGTCCACAGATCCGTGTGCCCTGCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VNIYCCLYSWSAESP*RSFATVHRSVCPAW Trigger: CCAGGCAGGGCACACGGATCTGTGGACTGTAGCAAAGGACCTCAAAGGGGACTCTGCAGACCATGAGTACAAACAGCAGTAAATATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR-3UTR GCA 90 bp | AGATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATACCAATGGCCAGAAGTaGAGTGCAGCTGTGAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: RSPCLCLPSAGIKVGYQHTNGQK*SAAVRT Trigger: TGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGT...ATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR CAA 90 bp | TACTGTAACTCCTGCTTGCTTTCTCTTACACACCACAGACAGAGCTaGGTTCCCTTTTGGATGAAGGTCAAATTCTCTCTCCCCAGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: YCNSCLLSLTHHRQS*VPFWMKVKFSLPSP Trigger: GGGGCTGGGGAGAGAGAATTTGACCTTCATCCAAAAGGGAACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR GCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTTATGTACATGGCTTCTaGACCATCTTTGCTGAGCAA | + |
|
Preference number: 2 (lower is better) Translates to: SKANFCFFATPARVLKAPYVHGF*TIFAEQ Trigger: TTGCTCAGCAAAGATGGTGCAGAAGCCATGTACATA...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR GCA 90 bp | TTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACAGACAGAGCTTGGTTTGGCCAGAAGTGCAGTaGAGCTGTGAGGACAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: FYCNSCLLSLTHHRQSLVWPEVQ*SCEDSS Trigger: GCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCA...AACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCACTAGCTTCCACTTCTACCTCTGGGCTTAGTCTGAGAAGAGTGGCTGTACAAGCCATCAGGTTCTaGTCAATGGTTTCCATCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TALASTSTSGLSLRRVAVQAIRF*SMVSIR Trigger: CCTGATGGAAACCATTGAGCAGAACCTGATGGCTTG...TACAGCCACTCTTCTCAGACTAAGCCCAGAGGTAGAAGTGGAAGCTAGTGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGAGCTTCTACAGGCCCTGCTGGAGTGTCACACTTAGAAAAGGAGGAACATGTGCTTTACCCTCTTCTTaGGAGACCTGGTTAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QSFYRPCWSVTLRKGGTCALPSS*ETWLGR Trigger: TCTTCCTAACCAGGTCTCCCAAGAAGAGGGTAAAGC...ACATGTTCCTCCTTTTCTAAGTGTGACACTCCAGCAGGGCCTGTAGAAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CCA 90 bp | CCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTATATCAGGTTCTGCTCAATaGTTTCCATCAGGAGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PMLRTAQTPDWAIHKASISGSAQ*FPSGAK Trigger: CTTTGCTCCTGATGGAAACCATTGAGCAGAACCTGA...TATACTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR CAA 90 bp | GGACTCTCTTCTGTTCACACAGCCCATGTAAATATTTACTGCTGTTaGTACTCATGGTCTGCAGAGTCCCCTTTGAGGTCCTTTGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: GLSSVHTAHVNIYCC*YSWSAESPLRSFAT Trigger: TGTAGCAAAGGACCTCAAAGGGGACTCTGCAGACCATGAGTACAAACAGCAGTAAATATTTACATGGGCTGTGTGAACAGAAGAGAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTATATTTTACTGTAACTCCTaGTTGCTTTCTCTTACACAC | + |
|
Preference number: 2 (lower is better) Translates to: PMLRTAQTPDWAIHKASIFYCNS*LLSLTH Trigger: GTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAA...TATACTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR-3UTR TCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGCTGCACCATCTTTGCTaGGCAATAAAAATACCATCC | + |
|
Preference number: 2 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRLHHLC*AIKIPS Trigger: GGATGGTATTTTTATTGCTCAGCAAAGATGGTGCAG...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGTGTGGAGAGAGAGGTTaGTTCTCAGTTTTTCATAAG | + |
|
Preference number: 2 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRCGERG*FSVFHK Trigger: CTTATGAAAAACTGAGAACCAACCTCTCTCTCCACA...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR-3UTR TCA 90 bp | ATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACATGGTTCCCTTTTGGATaGAGGTCAAATTCTCTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: IILCLFTVTPACFLLHTTWFPFG*RSNSLS Trigger: GGAGAGAGAATTTGACCTTCATCCAAAAGGGAACCA...TGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR CCA 72 bp | CACTGGCGTGTAGGACAGGGGCCTGGTCACTCGGGCTaGGCTGCTAGGAGTGAGGCCCCTGGGCCCGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HWRVGQGPGHSG*AARSEAPGPEV Trigger: CACCTCGGGCCCAGGGGCCTCACTCCTAGCAGCCCAGCCCGAGTGACCAGGCCCCTGTCCTACACGCCAGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | TGTGGCAGCAGCGGGTCGGTGTGGAGGGTTTTCAGGTaGATCTCACCCCCTCACTGGCGTGTAGGACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: CGSSGSVWRVFR*ISPPHWRVGQG Trigger: CCCCTGTCCTACACGCCAGTGAGGGGGTGAGATGCACCTGAAAACCCTCCACACCGACCCGCTGCTGCCACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGCAGCTGGGCTCCTCTaGGCCCCTGCAGGGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: SKANFCFFATPARVLKAPAAGLL*APAGHS Trigger: GCTGTGCCCTGCAGGGGCCAAGAGGAGCCCAGCTGC...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CCA 72 bp | CACAACAGTGAGACCTGTGGCAGCAGCGGGTCGGTGTaGAGGGTTTTCAGGTGCATCTCACCCCCTCACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HNSETCGSSGSV*RVFRCISPPHW Trigger: CCAGTGAGGGGGTGAGATGCACCTGAAAACCCTCCACACCGACCCGCTGCTGCCACAGGTCTCACTGTTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | CTTCCAGGCCACAGCCAATCTCTACCCAGGGCTGCATaGAGTATGTCAGCTGTCCCCAGCCTCCTCCAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: LPGHSQSLPRAA*SMSAVPSLLQG Trigger: ACCCTGGAGGAGGCTGGGGACAGCTGACATACTCCATGCAGCCCTGGGTAGAGATTGGCTGTGGCCTGGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | GAGGCAGGAAGCTCTGCAGTCCTGGAGGTGACAGCATaGCACCCACAAGAGGGCCAGGCTACAGGAAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: EAGSSAVLEVTA*HPQEGQATGRD Trigger: GTCTCTTCCTGTAGCCTGGCCCTCTTGTGGGTGCCATGCTGTCACCTCCAGGACTGCAGAGCTTCCTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | GTGTGGTGTCTGCTCCAGACAGGCTTTCTATCTGGCTaGCTGGGTCTGCAGCCAGCCTCTCGGATGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VWCLLQTGFLSG*LGLQPASRMLL Trigger: CAGGAGCATCCGAGAGGCTGGCTGCAGACCCAGCCAGCCAGATAGAAAGCCTGTCTGGAGCAGACACCACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR TCA 72 bp | AGGAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTaGGGTTGCCACACAGACTTCGTAGAGGGTAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RKALCIPNGPRA*GCHTDFVEGRW Trigger: CCACCTACCCTCTACGAAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| 3UTR GCA 72 bp | ACACCTTCCAGGCCACAGCCAATCTCTACCCAGGGCTaGATGGAGTATGTCAGCTGTCCCCAGCCTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: TPSRPQPISTQG*MEYVSCPQPPP Trigger: TGGAGGAGGCTGGGGACAGCTGACATACTCCATGCAGCCCTGGGTAGAGATTGGCTGTGGCCTGGAAGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | CTCACAAAGGTGCCTTCCCTGGGAGGCAGGAAGCTCTaGAGTCCTGGAGGTGACAGCATGGCACCCACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: LTKVPSLGGRKL*SPGGDSMAPTR Trigger: TCTTGTGGGTGCCATGCTGTCACCTCCAGGACTGCAGAGCTTCCTGCCTCCCAGGGAAGGCACCTTTGTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | TGCCAGTTCCAGGTCAGAAGTGGGAGCTCTCTCCTCTaGAGCTCACAAAGGTGCCTTCCCTGGGAGGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: CQFQVRSGSSLL*SSQRCLPWEAG Trigger: TCCTGCCTCCCAGGGAAGGCACCTTTGTGAGCTGCAGAGGAGAGAGCTCCCACTTCTGACCTGGAACTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | GCTGAGGAAGTCTGTGGAGCCAGTGAGGAAGACTCCTaGATCCCTCCCCGTGATGGGTTAACCCCACAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AEEVCGASEEDS*IPPRDGLTPQS Trigger: GCTCTGTGGGGTTAACCCATCACGGGGAGGGATCCAGGAGTCTTCCTCACTGGCTCCACAGACTTCCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | GGTGGGAGGAGGACAGGTCTGACCTCCGGGGTTGGCTaGTTTCTCCTAAGGACTACAGGACCCTTAGACAGG | + |
|
Preference number: 3 (lower is better) Translates to: GGRRTGLTSGVG*FLLRTTGPLDR Trigger: CCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCGGAGGTCAGACCTGTCCTCCTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR TCA 72 bp | AGACAAATTGAGATAGGGGAGAATGCAGAGGGGCCCTaGGCCGGGTCACCACCGGAGAGAATTAGGGAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: RQIEIGENAEGP*AGSPPERIREG Trigger: CCCCTCCCTAATTCTCTCCGGTGGTGACCCGGCTCAGGGCCCCTCTGCATTCTCCCCTATCTCAATTTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | ACTGGCCGGCCATTCCACCAATGGCCAGAAGTGCAGTaGAGCTGTGAGGACAGCAGCACCCATACTCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: TGRPFHQWPEVQ*SCEDSSTHTHN Trigger: GTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGTGGAATGGCCGGCCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR TCA 72 bp | CTGACAGGGTGGAAGCAGGAAAGACCTCTGGGCCTGTaGACATCTAGAGCTTACCTGCCATTCCCTGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: LTGWKQERPLGL*TSRAYLPFPAP Trigger: GGGAGCAGGGAATGGCAGGTAAGCTCTAGATGTTCACAGGCCCAGAGGTCTTTCCTGCTTCCACCCTGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGCTGCCCACCCTAGTCCCAGAGCTCACTTCCTATACATTCTGGTGAGGTCCCACCCTCCACTCTaGGATCTTGATTTCCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSAAHPSPRAHFLYILVRSHPPL*DLDFPE Trigger: CTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGGA...CCTCACCAGAATGTATAGGAAGTGAGCTCTGGGACTAGGGTGGGCAGCAGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR TCA 72 bp | AGAAAAAGAACAATCATTCGGCAGGGTGGAGCAGCCTaGCTGAGGGAAAGCTGGCTGGGGTTGACCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RKRTIIRQGGAA*LRESWLGLTRQ Trigger: CTGCCTGGTCAACCCCAGCCAGCTTTCCCTCAGTCAGGCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | TCGAGCCATTCCTTCAAAGGCCAATTTCTGCTTCTTTaGGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: SSHSFKGQFLLL*DPSQSSQGPWR Trigger: CCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGGAATGGCTCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | ACGGGAGAACTGAGTGCTGGACAAGCCATCAGGTTCTaGTCAATGGTTTCCATCAGGAGCAAAGGGGGCACC | + |
|
Preference number: 3 (lower is better) Translates to: TGELSAGQAIRF*SMVSIRSKGGT Trigger: GGTGCCCCCTTTGCTCCTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | GTACTCATGGTCTGCAGAGTCCCCTTTGAGGTCCTTTaGTACAGTCCACAGATCCGTGTGCCCTGCCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VLMVCRVPFEVL*YSPQIRVPCLD Trigger: ATCCAGGCAGGGCACACGGATCTGTGGACTGTAGCAAAGGACCTCAAAGGGGACTCTGCAGACCATGAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR CCA 72 bp | CTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTaGTGTCTGCTCCAGACAGGCTTTCTATCTGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LEMSLWKVPRAV*CLLQTGFLSGW Trigger: CCAGCCAGATAGAAAGCCTGTCTGGAGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCTGCTGCCCACCCTAGTCCCAGAGCTCACTTCCTATACATTCTGGTGAGGCTCCACTCTTGGATCTaGATTTCCCAGAGTATGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GSAAHPSPRAHFLYILVRLHSWI*ISQSMG Trigger: CCCCATACTCTGGGAAATCAAGATCCAAGAGTGGAG...CCTCACCAGAATGTATAGGAAGTGAGCTCTGGGACTAGGGTGGGCAGCAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | AGGCCAGATCGAGCCATTCCTTCAAAGGCCAATTTCTaGTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RPDRAIPSKANF*FFATPARVLKA Trigger: GGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGGAATGGCTCGATCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR GCA 72 bp | AAAGACCTCTGGGCCTGTGAACATCTAGAGCTTACCTaGCATTCCCTGCTCCCCAAGAATGGAGCCACCCAA | + |
|
Preference number: 3 (lower is better) Translates to: KDLWACEHLELT*HSLLPKNGATQ Trigger: TTGGGTGGCTCCATTCTTGGGGAGCAGGGAATGGCAGGTAAGCTCTAGATGTTCACAGGCCCAGAGGTCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR TCA 72 bp | GCCATTCCACCAATGGCCAGAAGTGCAGTGCAGCTGTaGGGACAGCAGCACCCATACTCACAACCTCTATAT | + |
|
Preference number: 3 (lower is better) Translates to: AIPPMARSAVQL*GQQHPYSQPLY Trigger: ATATAGAGGTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTGGCCATTGGTGGAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | GATCCATGCTCAGAGCAGGAGAACGGGAGAACTGAGTaGTGGACAAGCCATCAGGTTCTGCTCAATGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: DPCSEQENGRTE*WTSHQVLLNGF Trigger: GAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCCGTTCTCCTGCTCTGAGCATGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR CCA 72 bp | GGTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTaGAGCAGCCTGACTGAGGGAAAGCTGGCTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GFHKKKNNHSAG*SSLTEGKLAGV Trigger: AACCCCAGCCAGCTTTCCCTCAGTCAGGCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | CCATGCTCAGAGCAGGAGAACGGGAGAACTGAGTGCTaGACAAGCCATCAGGTTCTGCTCAATGGTTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PCSEQENGRTEC*TSHQVLLNGFH Trigger: ATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCCGTTCTCCTGCTCTGAGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTAGAGACTTACTTCGCTaGGAAGGCAATAGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: SKANFCFFATPARVLKAPRDLLR*EGNSTP Trigger: AGGTGTGCTATTGCCTTCCAAGCGAAGTAAGTCTCT...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | TTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTaGAAAGTTCCCAGGGCAGTGTGGTGTCTGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: FQKTRVWLEMSL*KVPRAVWCLLQ Trigger: CTGGAGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGCTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTGGAAATATTTACTGCTGTTaGTACTCATGGTCTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: MGSHKAHRPSVRFLSQPGNIYCC*YSWSAE Trigger: CTCTGCAGACCATGAGTACAAACAGCAGTAAATATT...TCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAGCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR CCA 72 bp | CAGCAAAACCAAAGGGAGAGCTGTGGAGAGAGAGGTTaGTTCTCAGTTTTTCATAAGCTAGACAGCCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: QQNQRESCGERG*FSVFHKLDSPG Trigger: CCCTGGGCTGTCTAGCTTATGAAAAACTGAGAACCAACCTCTCTCTCCACAGCTCTCCCTTTGGTTTTGCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | GGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTaGACTCTCTTCTGTTCACACAGCCCATGTAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: GSQALSQISVPT*TLFCSHSPCKY Trigger: ATATTTACATGGGCTGTGTGAACAGAAGAGAGTCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR TCA 72 bp | AGTCTTGTTTCATCCGATGTGGTGAACCTCTTTCCCTaGGATTTCTCTGGAAGAAACCAGAGCCCCAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLVSSDVVNLFP*DFSGRNQSPRE Trigger: TTCCCTGGGGCTCTGGTTTCTTCCAGAGAAATCTCAGGGAAAGAGGTTCACCACATCGGATGAAACAAGACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | ATCTCGTGGCCCATAAACTTTCAGAAGACAAGAGTATaGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: ISWPINFQKTRV*LEMSLWKVPRA Trigger: TGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTTTATGGGCCACGAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | ATGGCAAGGAACAGAGGCAAGGCTGATAGCATCTCGTaGCCCATAAACTTTCAGAAGACAAGAGTATGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: MARNRGKADSIS*PINFQKTRVWL Trigger: CAGCCATACTCTTGTCTTCTGAAAGTTTATGGGCCACGAGATGCTATCAGCCTTGCCTCTGTTCCTTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGCTTCTACAGGCCCTGCTGGAGTGTCACACTTAGAAAAGGAGGAACATGTGCTTCTGCACCATCTTaGCTGAGCAATAAAAATACC | + |
|
Preference number: 3 (lower is better) Translates to: QSFYRPCWSVTLRKGGTCASAPS*LSNKNT Trigger: GGTATTTTTATTGCTCAGCAAAGATGGTGCAGAAGC...ACATGTTCCTCCTTTTCTAAGTGTGACACTCCAGCAGGGCCTGTAGAAGCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR TCA 72 bp | AGTCTGCAAAGACCTTGTAGATGGAGGGCAGGTTGTTaGCCAGGACTCTCATGTACTAACATACCAACACTA | + |
|
Preference number: 3 (lower is better) Translates to: SLQRPCRWRAGC*PGLSCTNIPTL Trigger: TAGTGTTGGTATGTTAGTACATGAGAGTCCTGGTCAACAACCTGCCCTCCATCTACAAGGTCTTTGCAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CCA 72 bp | ATCATACCCATGTTAAGAACAGCGCAGACCCCAGACTaGGCAATCCACAAAGCCAGTATAATTCTTTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: IIPMLRTAQTPD*AIHKASIILCL Trigger: AAGGCAAAGAATTATACTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | CCATGTAAATATTTACTGCTGTTTGTACTCATGGTCTaGAGAGTCCCCTTTGAGGTCCTTTGCTACAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: PCKYLLLFVLMV*RVPFEVLCYSP Trigger: TGGACTGTAGCAAAGGACCTCAAAGGGGACTCTGCAGACCATGAGTACAAACAGCAGTAAATATTTACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR GCA 72 bp | AGCCAGTATAATTCTTTGCCTTTTTACTGTAACTCCTaGTTGCTTTCTCTTACACACCACAGACAGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SQYNSLPFYCNS*LLSLTHHRQSL Trigger: CAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | CCAGACTGGGCAATCCACAAAGCCAGTATAATTCTTTaGCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PDWAIHKASIIL*LFTVTPACFLL Trigger: TAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCTTTGTGGATTGCCCAGTCTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR GCA 72 bp | AGTATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTaGTTTCTCTTACACACCACAGACAGAGCTTGGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SIILCLFTVTPA*FLLHTTDRAWF Trigger: GAACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR TCA 72 bp | AAATCACTATGTACATGGCTTCTGCACCATCTTTGCTaGGCAATAAAAATACCATCCGGTTTCCACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: KSLCTWLLHHLC*AIKIPSGFHKK Trigger: TTTCTTGTGGAAACCGGATGGTATTTTTATTGCTCAGCAAAGATGGTGCAGAAGCCATGTACATAGTGATTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | CACCTGGGTTCCCACTGTCACTGGCCGGCCATTCCACCAATGGCCAGAAGTGCACCTCCGGAGGCCGGCTaGGGTCATCCCAGGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: HLGSHCHWPAIPPMARSAPPEAG*GHPRHT Trigger: AGTGTGCCTGGGATGACCTCAGCCGGCCTCCGGAGG...TGCACTTCTGGCCATTGGTGGAATGGCCGGCCAGTGACAGTGGGAACCCAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | TCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCGAGCCCTGTCGTGGGTaGGGCCGTTCTGTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRPQPEFSRPLEAPVVGEPCRG*GRSVAE Trigger: CTCAGCGACAGAACGGCCTCACCCACGACAGGGCTC...GCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | CACCCTAGCCCGAGCAATTTCCACCCAGGCAGGCGAGGTCCCAGCTCTGAGTGGGGTGTCCGCACAGGCTaGATCTGTGGGTCCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HPSPSNFHPGRRGPSSEWGVRTG*ICGSSV Trigger: GACGGAGGACCCACAGATGCAGCCTGTGCGGACACC...CCACTCAGAGCTGGGACCTCGCCTGCCTGGGTGGAAATTGCTCGGGCTAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGCTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTGGACCTCCGGAGGCCGGCTaGGGTCATCCCAGGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: MGSHKAHRPSVRFLSQPGPPEAG*GHPRHT Trigger: AGTGTGCCTGGGATGACCTCAGCCGGCCTCCGGAGG...TCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAGCCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWLVSPKDYRTLRQAAEASEAV*RGRCSG Trigger: GCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGC...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | CCCAAAGGAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACATACGGAGCCCTGTCGTaGGTGAGGCCGTTCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PKGRPCASQMAPGLEVATYGALS*VRPFCR Trigger: GCGACAGAACGGCCTCACCCACGACAGGGCTCCGTA...TGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTCCTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGCTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTGGATCCCGGGGGAAAGAGTaGAGCAAAGGCCGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MGSHKAHRPSVRFLSQPGSRGKE*SKGRRG Trigger: GCCCCTCCGGCCTTTGCTTCACTCTTTCCCCCGGGA...TCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAGCCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | AACACTAACTCTGTGATGTGGTGCTCAGAGCATGCATTCCTGCCCCCAGGCCAGGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTNSVMWCSEHAFLPPGQASEAV*RGRCSG Trigger: GCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGC...CTGGCCTGGGGGCAGGAATGCATGCTCTGAGCACCACATCACAGAGTTAGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | CACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCAGAGTATGGGGACTGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRPTLHSWILISQSMGTASEAV*RGRCSG Trigger: GCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGC...AGTCCCCATACTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGGGCACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCAGAGTCCGTGGAGCTGTCGCTaGCCAAACTGTCCTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEGHPRPTLHSWILISQSPWSCR*PNCPCG Trigger: GCCGCAAGGACAGTTTGGGCAGCGACAGCTCCACGG...ACTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTGCCCCTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | CTCTGGAGAGGGGCACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCATCTCGAGCTGCCGTGTaGGGATCAGCTCGTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LWRGAPTSHPPLLDLDFPSRAAV*GSARGG Trigger: TCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGA...TGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTGCCCCTCTCCAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGCTCTGCTGGCCATGTTaGTGGGGCAGACTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSPGSRKEGRATLTQSELCWPC*WGRLPS Trigger: ACTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAG...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR TCA 90 bp | GTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTGAGCCCTGTCGTGGGTaGGGCCGTTCTGTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VGWFLLRTTGPLDRQQRPEPCRG*GRSVAE Trigger: CTCAGCGACAGAACGGCCTCACCCACGACAGGGCTC...AGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCCTGCATCAGCTCTaGTGGCCATGTTGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RGWLVSPKDYRTLRQAAEALHQL*WPCWWG Trigger: GCCCCACCAACATGGCCAGCAGAGCTGATGCAGGGC...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTGCTGCCCACCCTAGTCCCAGAGCTCACTTCCTATACATTCTGGTGAGGGGTGTCCGCACAGGCTaGATCTGTGGGTCCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: GSAAHPSPRAHFLYILVRGVRTG*ICGSSV Trigger: GACGGAGGACCCACAGATGCAGCCTGTGCGGACACC...CCTCACCAGAATGTATAGGAAGTGAGCTCTGGGACTAGGGTGGGCAGCAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGTGCTGGCCATGTTGGTaGGGCAGACTCCCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SQSPGSRKEGRATLTQSECWPCW*GRLPSF Trigger: GAAACTGGGGAGTCTGCCCCACCAACATGGCCAGCA...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | TACATTCTGGTGAGGTTTCCATACTGTCTCTGGAGAGGGGCACCCACGTCCCACCTCGGAGCCCTGTCGTaGGTGAGGCCGTTCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: YILVRFPYCLWRGAPTSHLGALS*VRPFCR Trigger: GCGACAGAACGGCCTCACCCACGACAGGGCTCCGAG...GTGGGACGTGGGTGCCCCTCTCCAGAGACAGTATGGAAACCTCACCAGAATGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTCAGCTCGTGGGGGATaGTGGCCGTGGAGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQSARGG*WPWSCR Trigger: GCGACAGCTCCACGGCCATCATCCCCCACGAGCTGA...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | GGAAGAGACAGCGACGGGAGATGGGGACAGAATGGATGTGAGAAAGAGGAAGGGGCCCTGCATCAGCTCTaGTGGCCATGTTGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDSDGRWGQNGCEKEEGALHQL*WPCWWG Trigger: GCCCCACCAACATGGCCAGCAGAGCTGATGCAGGGC...CCCTTCCTCTTTCTCACATCCATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGAGTATGGGGACTTCTCACCTGGGTTCCCACTGTCACTGGCCGGCCAAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPRVWGLLTWVPTVTGRPSSRMP*PFHCWA Trigger: AGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACT...TGGCCGGCCAGTGACAGTGGGAACCCAGGTGAGAAGTCCCCATACTCTGGGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AACACTAACTCTGTGATGTGGTGCTCAGAGCATGCATTCCTGCCCCCAGGCCAGGTGCGGATCAGCTCGTaGGGGATGATGGCCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTNSVMWCSEHAFLPPGQVRISS*GMMAVE Trigger: CTCCACGGCCATCATCCCCCACGAGCTGATCCGCAC...CTGGCCTGGGGGCAGGAATGCATGCTCTGAGCACCACATCACAGAGTTAGTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGGCCCTGCATCAGCTCTaGTGGCCATGTTGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQALHQL*WPCWWG Trigger: GCCCCACCAACATGGCCAGCAGAGCTGATGCAGGGC...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGCTGCATCAGCTCTGCTaGCCATGTTGGTGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGWLVSPKDYRTLRQAAELHQLC*PCWWGR Trigger: TCTGCCCCACCAACATGGCCAGCAGAGCTGATGCAG...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR TCA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGCCTCCGGAGGCCGGCTaGGGTCATCCCAGGCACACT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQPPEAG*GHPRHT Trigger: AGTGTGCCTGGGATGACCTCAGCCGGCCTCCGGAGG...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCCAGAGTATGGGGACTTCTCACCTGGGTTCCCACTGTCACTGGCCGGCCAAGGCCGTTCTGTCGCTaGGAATTGATTGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPRVWGLLTWVPTVTGRPRPFCR*ELIGGR Trigger: CCTTCCACCAATCAATTCTCAGCGACAGAACGGCCT...TGGCCGGCCAGTGACAGTGGGAACCCAGGTGAGAAGTCCCCATACTCTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTGAGCCCTGTCGTGGGTaGGGCCGTTCTGTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAAEPCRG*GRSVAE Trigger: CTCAGCGACAGAACGGCCTCACCCACGACAGGGCTC...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | TTTCCCAGAGTATGGGGACTTCTCACCTGGGTTCCCACTGTCACTGGCCGGCCATTATCCAAAGGGCTGTaGCAAGACACATGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: FPRVWGLLTWVPTVTGRPLSKGL*QDTWSP Trigger: CGGGGACCATGTGTCTTGGCACAGCCCTTTGGATAA...TGGCCGGCCAGTGACAGTGGGAACCCAGGTGAGAAGTCCCCATACTCTGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPLYCARREFPAHHFPSDTLRR*RAVPGE Trigger: TTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTC...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGACAGCGACGGGAGATGGGGACAGAATGGATGTGAGAAAGAGGAAGGGCTGCATCAGCTCTGCTaGCCATGTTGGTGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GRDSDGRWGQNGCEKEEGLHQLC*PCWWGR Trigger: TCTGCCCCACCAACATGGCCAGCAGAGCTGATGCAG...CCCTTCCTCTTTCTCACATCCATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | GTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTCACAGGCTGCATCTGTaGGTCCTCCGTCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGWFLLRTTGPLDRQQRPHRLHL*VLRQQH Trigger: ATGCTGCTGACGGAGGACCCACAGATGCAGCCTGTG...AGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| 3UTR CAA 72 bp | CAGACCAGGCTGAGTTTAGCCACTCTCCTAGAGCCATaGCACAGGAATGACAGGGTCTGGTCCCAGCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QTRLSLATLLEP*HRNDRVWSQQE Trigger: CTCCTGCTGGGACCAGACCCTGTCATTCCTGTGCAATGGCTCTAGGAGAGTGGCTAAACTCAGCCTGGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CAA 72 bp | CTCTGGAGAGGGGCACCCACGTCCCACCCTCCACTCTaGGATCTTGATTTCCCAGAGTATGGGGACTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LWRGAPTSHPPL*DLDFPEYGDFS Trigger: TGAGAAGTCCCCATACTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTGCCCCTCTCCAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | AGATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATGAGCCCTGTCGTGGGTaGGGCCGTTCTGTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RSPCLCLPSAGIKVGYQHEPCRG*GRSVAE Trigger: CTCAGCGACAGAACGGCCTCACCCACGACAGGGCTC...ATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTGCCCTGCATCAGCTCTaGTGGCCATGTTGGTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAAALHQL*WPCWWG Trigger: GCCCCACCAACATGGCCAGCAGAGCTGATGCAGGGC...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | CACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPFYSWVSPLQAVTLEVASEAV*RGRCSG Trigger: GCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGC...GACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTGCTGGCCATGTTGGTaGGGCAGACTCCCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQCWPCW*GRLPSF Trigger: GAAACTGGGGAGTCTGCCCCACCAACATGGCCAGCA...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGCTGCATCAGCTCTGCTaGCCATGTTGGTGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQLHQLC*PCWWGR Trigger: TCTGCCCCACCAACATGGCCAGCAGAGCTGATGCAG...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGCAGACACCAACAATCTaGAGGAAAGTCACTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQSPGSRKEGRATLTQSEQTPTI*RKVTTP Trigger: TGGGGTAGTGACTTTCCTCCAGATTGTTGGTGTCTG...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SQSPGSRKEGRATLTQSEDRSQI*FLPAAC Trigger: ACATGCGGCGGGGAGAAACCATATTTGAGATCGATC...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | GAACATGTTTCACCAGCATGGCAGCCGGCACTGCCACCCTCGGCAGCCCACACAAGGGCTCCCGACTCTTaGTTAAATTTTAGATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EHVSPAWQPALPPSAAHTRAPDS*LNFRCT Trigger: CGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCT...TGTGTGGGCTGCCGAGGGTGGCAGTGCCGGCTGCCATGCTGGTGAAACATGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCACGGGTGTTCCTCAGTaGCAAAGGCGCCTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: QEYGWRCPCGKFPGQCGVTGVPQ*QRRLPL Trigger: GAGTGGAAGGCGCCTTTGCCACTGAGGAACACCCGT...GACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | CACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCTCCCGGGGGAAAGAGTaGAGCAAAGGCCGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLPFYSWVSPLQAVTLEVSRGKE*SKGRRG Trigger: GCCCCTCCGGCCTTTGCTTCACTCTTTCCCCCGGGA...GACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACTCCCGGGGGAAAGAGTaGAGCAAAGGCCGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHSRGKE*SKGRRG Trigger: GCCCCTCCGGCCTTTGCTTCACTCTTTCCCCCGGGA...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACTCAGCTCGTGGGGGATaGTGGCCGTGGAGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHSARGG*WPWSCR Trigger: GCGACAGCTCCACGGCCATCATCCCCCACGAGCTGA...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR TCA 90 bp | CCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGATCAGCTCGTGGGGGATaGTGGCCGTGGAGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PFIHGCLLYKLSHWKSPGSARGG*WPWSCR Trigger: GCGACAGCTCCACGGCCATCATCCCCCACGAGCTGA...TCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | GATCACCCTAGTCTTGTAGGATTAGTCCAACTCCTTTTCCACCCTAGCCCGAGCAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DHPSLVGLVQLLFHPSPSSSRMP*PFHCWA Trigger: AGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACT...GCTCGGGCTAGGGTGGAAAAGGAGTTGGACTAATCCTACAAGACTAGGGTGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | AACACTAACTCTGTGATGTGGTGCTCAGAGCATGCATTCCTGCCCCCAGGCCAGGTAGTAGTTCCAGGATaGCCTGCCCGTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: NTNSVMWCSEHAFLPPGQVVVPG*PARSTV Trigger: AACAGTGGAACGGGCAGGGCATCCTGGAACTACTAC...CTGGCCTGGGGGCAGGAATGCATGCTCTGAGCACCACATCACAGAGTTAGTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTGTAGTAGTTCCAGGATaGCCTGCCCGTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGWFLLRTTGPLDRQQRPVVVPG*PARSTV Trigger: AACAGTGGAACGGGCAGGGCATCCTGGAACTACTAC...AGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTAGGGTCTCCCGGATCTaGTCTGTGTCTTTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PRPLYCARREFPAHHFPSRVSRI*SVSLPD Trigger: GTCTGGCAAAGACACAGAGCAGATCCGGGAGACCCT...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGTCTCGAGCTGCCGTGTaGGGATCAGCTCGTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFMGVSFTSCHTGSHQEQSRAAV*GSARGG Trigger: TCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGA...CTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGWLVSPKDYRTLRQAAECPFHC*AECNSS Trigger: TGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCA...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | TTTCCCAGAGTATGGGGACTTCTCACCTGGGTTCCCACTGTCACTGGCCGGCCAGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FPRVWGLLTWVPTVTGRPDRSQI*FLPAAC Trigger: ACATGCGGCGGGGAGAAACCATATTTGAGATCGATC...TGGCCGGCCAGTGACAGTGGGAACCCAGGTGAGAAGTCCCCATACTCTGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGTCGCTGAGAATTGATTaGTGGAAGGACAGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQSPGSRKEGRATLTQSESLRID*WKDRFA Trigger: AGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGA...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCACTCGGAGCCCTGTCGTaGGTGAGGCCGTTCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: FIHGCLLYKLSHWKSPGALGALS*VRPFCR Trigger: GCGACAGAACGGCCTCACCCACGACAGGGCTCCGAG...TGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | TTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGGTGCGGATCAGCTCGTaGGGGATGATGGCCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFMGVSFTSCHTGSHQEQVRISS*GMMAVE Trigger: CTCCACGGCCATCATCCCCCACGAGCTGATCCGCAC...CTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | ACTCTTTATGTAGAGCAGGCTGGCCTCAAATTCATAGATCTCCCTGTCTCTGCCGTGCGGATCAGCTCGTaGGGGATGATGGCCGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TLYVEQAGLKFIDLPVSAVRISS*GMMAVE Trigger: CTCCACGGCCATCATCCCCCACGAGCTGATCCGCAC...GGCAGAGACAGGGAGATCTATGAATTTGAGGCCAGCCTGCTCTACATAAAGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | TGTAGAGCAGGCTGGCCTCAAATTCATAGATCTCCCTGTCTCTGCCTCCCAAGTACGGGTGTTCCTCAGTaGCAAAGGCGCCTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: CRAGWPQIHRSPCLCLPSTGVPQ*QRRLPL Trigger: GAGTGGAAGGCGCCTTTGCCACTGAGGAACACCCGT...ACTTGGGAGGCAGAGACAGGGAGATCTATGAATTTGAGGCCAGCCTGCTCTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| 3UTR CAA 72 bp | CTGAAGTCCCCAGAGCCTTGTAGAGACTTACTTCGCTaGGAAGGCAATAGCACACCTTCCAGGCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKSPEPCRDLLR*EGNSTPSRPQP Trigger: TGGCTGTGGCCTGGAAGGTGTGCTATTGCCTTCCAAGCGAAGTAAGTCTCTACAAGGCTCTGGGGACTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CAA 72 bp | ATCGAGCCATTCCTTCAAAGGCCAATTTCTGCTTCTTaGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IEPFLQRPISAS*RPQPEFSRPLE Trigger: CTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGGAATGGCTCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTAGGCCGTTCTGTCGCTaGGAATTGATTGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKANFCFFATPARVLKAPRPFCR*ELIGGR Trigger: CCTTCCACCAATCAATTCTCAGCGACAGAACGGCCT...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | ACAGCACTAGCTTCCACTTCTACCTCTGGGCTTAGTCTGAGAAGAGTGGCTGTATTAGGCAGAGAGGGATaGGGGCTCCCGACTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TALASTSTSGLSLRRVAVLGREG*GLPTLG Trigger: ACCAAGAGTCGGGAGCCCTCATCCCTCTCTGCCTAA...TACAGCCACTCTTCTCAGACTAAGCCCAGAGGTAGAAGTGGAAGCTAGTGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | CCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGGTGTCCGCACAGGCTaGATCTGTGGGTCCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PFIHGCLLYKLSHWKSPGGVRTG*ICGSSV Trigger: GACGGAGGACCCACAGATGCAGCCTGTGCGGACACC...TCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGGTGTCCGCACAGGCTaGATCTGTGGGTCCTCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FIHGCLLYKLSHWKSPGAGVRTG*ICGSSV Trigger: GACGGAGGACCCACAGATGCAGCCTGTGCGGACACC...TGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCCCGTGGAGCTGTCGCTaGCCAAACTGTCCTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSPWSCR*PNCPCG Trigger: GCCGCAAGGACAGTTTGGGCAGCGACAGCTCCACGG...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCCGTGGAGCTGTCGCTaGCCAAACTGTCCTTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHPWSCR*PNCPCG Trigger: GCCGCAAGGACAGTTTGGGCAGCGACAGCTCCACGG...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | TTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCATCTCGAGCTGCCGTGTaGGGATCAGCTCGTGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIHGCLLYKLSHWKSPGASRAAV*GSARGG Trigger: TCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGA...TGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | CGGGGTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGCTCTCCTGTTGCAGGTaGGGATCGATCTCAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: RGWLVSPKDYRTLRQAAELSCCR*GSISNM Trigger: CATATTTGAGATCGATCCGCACCTGCAACAGGAGAG...CTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAACCCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTTGCTGGCCATGTTGGTaGGGCAGACTCCCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAACWPCW*GRLPSF Trigger: GAAACTGGGGAGTCTGCCCCACCAACATGGCCAGCA...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | ATACCATCCGGTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTGGAGCAGCCTCTGCTGGCCATGTTaGTGGGGCAGACTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IPSGFHKKKNNHSAGWSSLCWPC*WGRLPS Trigger: ACTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAG...GCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAACCGGATGGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | GATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATACTCTGCTGGCCATGTTaGTGGGGCAGACTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: DLPVSASQVLGLKLGINILCWPC*WGRLPS Trigger: ACTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAG...TATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTCTGCATCAGCTCTGCTaGCCATGTTGGTGGGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAALHQLC*PCWWGR Trigger: TCTGCCCCACCAACATGGCCAGCAGAGCTGATGCAG...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | AATGGGCTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTGGAAGGTGTTCTCTGACTaGAAGACATATCGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: NGLPQGSQALSQISVPTWKVFSD*KTYRAR Trigger: CCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTT...CCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAGCCCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | CACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCAGAGTATGGGGACTTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HPRPTLHSWILISQSMGTCPFHC*AECNSS Trigger: TGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCA...AGTCCCCATACTCTGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAGAGGGGCACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCATCGCTGAGAATTGATTaGTGGAAGGACAGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWRGAPTSHPPLLDLDFPSLRID*WKDRFA Trigger: AGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGA...TGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTGCCCCTCTCCAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | GATCACCCTAGTCTTGTAGGATTAGTCCAACTCCTTTTCCACCCTAGCCCGAGCAGGCCGTTCTGTCGCTaGGAATTGATTGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: DHPSLVGLVQLLFHPSPSRPFCR*ELIGGR Trigger: CCTTCCACCAATCAATTCTCAGCGACAGAACGGCCT...GCTCGGGCTAGGGTGGAAAAGGAGTTGGACTAATCCTACAAGACTAGGGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | GATCACCCTAGTCTTGTAGGATTAGTCCAACTCCTTTTCCACCCTAGCCCGAGCTTATCCAAAGGGCTGTaGCAAGACACATGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: DHPSLVGLVQLLFHPSPSLSKGL*QDTWSP Trigger: CGGGGACCATGTGTCTTGGCACAGCCCTTTGGATAA...GCTCGGGCTAGGGTGGAAAAGGAGTTGGACTAATCCTACAAGACTAGGGTGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | TTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LFMGVSFTSCHTGSHQEQSSRMP*PFHCWA Trigger: AGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACT...CTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACTGAGTGCTGGACAAGCCATCAGGTTCTGCTCAATGGTTTCCATCAGGTAGTAGTTCCAGGATaGCCTGCCCGTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRTECWTSHQVLLNGFHQVVVPG*PARSTV Trigger: AACAGTGGAACGGGCAGGGCATCCTGGAACTACTAC...CTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCACCCATCACATGTCACAGTAAGGGCAGTCTTGTTTCATCCGATGTGGAGGGTCTCCCGGATCTaGTCTGTGTCTTTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TEHPSHVTVRAVLFHPMWRVSRI*SVSLPD Trigger: GTCTGGCAAAGACACAGAGCAGATCCGGGAGACCCT...CCACATCGGATGAAACAAGACTGCCCTTACTGTGACATGTGATGGGTGCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | CTCTGGAGAGGGGCACCCACGTCCCACCCTCCACTCTTGGATCTTGATTTCCCAAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: LWRGAPTSHPPLLDLDFPKAKST*SVCSCK Trigger: TTTACAGGAACAGACGGACCAAGTGGATTTGGCTTT...TGGGAAATCAAGATCCAAGAGTGGAGGGTGGGACGTGGGTGCCCCTCTCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | TTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCACTCTGCTGGCCATGTTaGTGGGGCAGACTCCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIHGCLLYKLSHWKSPGALCWPC*WGRLPS Trigger: ACTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAG...TGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | GGAAGAGACAGCGACGGGAGATGGGGACAGAATGGATGTGAGAAAGAGGAAGGGAAGGTGTTCTCTGACTaGAAGACATATCGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRDSDGRWGQNGCEKEEGKVFSD*KTYRAR Trigger: CCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTT...CCCTTCCTCTTTCTCACATCCATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | TACATTCTGGTGAGGTTTCCATACTGTCTCTGGAGAGGGGCACCCACGTCCCACAAGGTGTTCTCTGACTaGAAGACATATCGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YILVRFPYCLWRGAPTSHKVFSD*KTYRAR Trigger: CCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTT...GTGGGACGTGGGTGCCCCTCTCCAGAGACAGTATGGAAACCTCACCAGAATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | TTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCACAGGCTGCATCTGTaGGTCCTCCGTCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFMGVSFTSCHTGSHQEQHRLHL*VLRQQH Trigger: ATGCTGCTGACGGAGGACCCACAGATGCAGCCTGTG...CTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGCACAGGCTGCATCTGTaGGTCCTCCGTCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQHRLHL*VLRQQH Trigger: ATGCTGCTGACGGAGGACCCACAGATGCAGCCTGTG...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACAGACTTCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EGPVHPKWPQGLRLPHRLLRIDW*KDRFAV Trigger: AACAGCAAACCTGTCCTTCCACCAATCAATTCTCAG...AAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTTAGTTACAGAAAGTCGAAGTCCCTTCCTTTCAGAATCTCTGGTCCTGTGCTCGGAGCCCTGTCGTaGGTGAGGCCGTTCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRKSKSLPFRISGPVLGALS*VRPFCR Trigger: GCGACAGAACGGCCTCACCCACGACAGGGCTCCGAG...CACAGGACCAGAGATTCTGAAAGGAAGGGACTTCGACTTTCTGTAACTAAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | TGGACAAGCCATCAGGTTCTGCTCAATGGTTTCCATCAGGAGCAAAGGGGGCACTCTGTCGCTGAGAATTaGTTGGTGGAAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WTSHQVLLNGFHQEQRGHSVAEN*LVEGQV Trigger: AACCTGTCCTTCCACCAATCAATTCTCAGCGACAGA...GTGCCCCCTTTGCTCCTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTTCTGTCGCTGAGAATTaGTTGGTGGAAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PRPLYCARREFPAHHFPSSVAEN*LVEGQV Trigger: AACCTGTCCTTCCACCAATCAATTCTCAGCGACAGA...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR TCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTAGGCCGTTCTGTCGCTaGGAATTGATTGGTGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAARPFCR*ELIGGR Trigger: CCTTCCACCAATCAATTCTCAGCGACAGAACGGCCT...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR TCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACTTAGGCAGAGAGGGATaGGGGCTCCCGACTCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHLGREG*GLPTLG Trigger: ACCAAGAGTCGGGAGCCCTCATCCCTCTCTGCCTAA...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | AGATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATAGGGTCTCCCGGATCTaGTCTGTGTCTTTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RSPCLCLPSAGIKVGYQHRVSRI*SVSLPD Trigger: GTCTGGCAAAGACACAGAGCAGATCCGGGAGACCCT...ATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | GTTGGCTGGTTTCTCCTAAGGACTACAGGACCCTTAGACAGGCAGCAGAGGCCTAACCGTCTGTCTCAATaGCTTTGTCAACTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VGWFLLRTTGPLDRQQRPNRLSQ*LCQLSP Trigger: AGGAGAGAGTTGACAAAGGCATTGAGACAGACGGTT...AGGCCTCTGCTGCCTGTCTAAGGGTCCTGTAGTCCTTAGGAGAAACCAGCCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCAGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSDTLRR*RAVPGE Trigger: TTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTC...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGACGATAGCGGTAACCTaGAGCGGGTTCGGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRTIAVT*SGFGWS Trigger: TGACCAGCCGAACCCGCTCCAGGTTACCGCTATCGT...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | CCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGATGCTGGCCATGTTGGTaGGGCAGACTCCCCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFIHGCLLYKLSHWKSPGCWPCW*GRLPSF Trigger: GAAACTGGGGAGTCTGCCCCACCAACATGGCCAGCA...TCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACACGGGTGTTCCTCAGTaGCAAAGGCGCCTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHTGVPQ*QRRLPL Trigger: GAGTGGAAGGCGCCTTTGCCACTGAGGAACACCCGT...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| 3UTR CAA 72 bp | TGGGATGGGTGTGGCACTCTGCAGTCATCCCCACACTaGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WDGCGTLQSSPH*PFYSWVSPLQA Trigger: AGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGTGTGGGGATGACTGCAGAGTGCCACACCCATCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR TCA 90 bp | GGGCCACGTGTCCTTGAGTCCCTGAAGTCCCCAGAGCCTTGTAGAGACTTACTTCATGTGCTGAATTCTTaGCTCACTGTTATCCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPRVLESLKSPEPCRDLLHVLNS*LTVIQR Trigger: CCTTTGGATAACAGTGAGTCAAGAATTCAGCACATG...AAGTAAGTCTCTACAAGGCTCTGGGGACTTCAGGGACTCAAGGACACGTGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCATATCGGGCTAGGCCCTaGATCAGCTCTGCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSYRARP*ISSAGH Trigger: ATGGCCAGCAGAGCTGATGCAGGGCCTAGCCCGATA...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | ATACCATCCGGTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTGGAGCAGCTTATCCAAAGGGCTGTaGCAAGACACATGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: IPSGFHKKKNNHSAGWSSLSKGL*QDTWSP Trigger: CGGGGACCATGTGTCTTGGCACAGCCCTTTGGATAA...GCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAACCGGATGGTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCAAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSSSRMP*PFHCWA Trigger: AGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACT...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | AGTTTTAGTTACAGAAAGTCGAAGTCCCTTCCTTTCAGAATCTCTGGTCCTGTGGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRKSKSLPFRISGPVDTLRR*RAVPGE Trigger: TTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTC...CACAGGACCAGAGATTCTGAAAGGAAGGGACTTCGACTTTCTGTAACTAAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | TCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTTCGCTGAGAATTGATTaGTGGAAGGACAGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKANFCFFATPARVLKAPSLRID*WKDRFA Trigger: AGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGA...AGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| 3UTR CAA 72 bp | TTCTCTTACACACCACAGACAGAGCTTGGTTCCCTTTaGGATGAAGGTCAAATTCTCTCTCCCCAGCCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: FSYTPQTELGSL*DEGQILSPQPP Trigger: AGGGGGCTGGGGAGAGAGAATTTGACCTTCATCCAAAAGGGAACCAAGCTCTGTCTGTGGTGTGTAAGAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR TCA 90 bp | CAAAGCCAGTATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTTCCCGGGGGAAAGAGTaGAGCAAAGGCCGGAGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QSQYNSLPFYCNSCLLSLSRGKE*SKGRRG Trigger: GCCCCTCCGGCCTTTGCTTCACTCTTTCCCCCGGGA...AAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | CTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACTTATCCAAAGGGCTGTaGCAAGACACATGGTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LALLFMGVSFTSCHTGSHLSKGL*QDTWSP Trigger: CGGGGACCATGTGTCTTGGCACAGCCCTTTGGATAA...GTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTAATGTAACTCCTCAGTaGAGACACCAACAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRPLYCARREFPAHHFPSNVTPQ*RHQQSG Trigger: TCCAGATTGTTGGTGTCTGCACTGAGGAGTTACATT...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR GCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCGTAGTAGTTCCAGGATaGCCTGCCCGTTCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSVVVPG*PARSTV Trigger: AACAGTGGAACGGGCAGGGCATCCTGGAACTACTAC...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR GCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGAACCGTCTGTCTCAATaGCTTTGTCAACTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQNRLSQ*LCQLSL Trigger: AAGAGAGAGTTGACAAAGGCATTGAGACAGACGGTT...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR GCA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCAAGGGTCTCCCGGATCTaGTCTGTGTCTTTGCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSRVSRI*SVSLPD Trigger: GTCTGGCAAAGACACAGAGCAGATCCGGGAGACCCT...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | TTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAAGTGCTCAGGGATGTTaGCAGAAGGACTCCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FIHGCLLYKLSHWKSPGASAQGC*QKDSPC Trigger: ACATGGGGAGTCCTTCTGCCAACATCCCTGAGCACT...TGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | AGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCTGCTAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SMAGDVLVESSQGSVVSAKAKST*SVCSCK Trigger: TTTACAGGAACAGACGGACCAAGTGGATTTGGCTTT...AGCAGACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PRPLYCARREFPAHHFPSKAKST*SVCSCK Trigger: TTTACAGGAACAGACGGACCAAGTGGATTTGGCTTT...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTTCTACAGGCCCTGCTGGAGTGTCACACTTAGAAAAGGAGGAACATGTCAGACACCAACAATCTaGAGGAAAGTCACTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSFYRPCWSVTLRKGGTCQTPTI*RKVTTP Trigger: TGGGGTAGTGACTTTCCTCCAGATTGTTGGTGTCTG...ACATGTTCCTCCTTTTCTAAGTGTGACACTCCAGCAGGGCCTGTAGAAGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQCPFHC*AECNSS Trigger: TGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCA...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGGCAGTGTGGTGTCCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QEYGWRCPCGKFPGQCGVLRIDW*KDRFAV Trigger: AACAGCAAACCTGTCCTTCCACCAATCAATTCTCAG...GACACCACACTGCCCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CCA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: HTHVKNSADPRLGNPQSQLRIDW*KDRFAV Trigger: AACAGCAAACCTGTCCTTCCACCAATCAATTCTCAG...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | TTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGAAGGTGTTCTCTGACTaGAAGACATATCGGGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LFMGVSFTSCHTGSHQEQKVFSD*KTYRAR Trigger: CCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTT...CTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CCA 90 bp | GATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATACAGACACCAACAATCTaGAGGAAAGTCACTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DLPVSASQVLGLKLGINIQTPTI*RKVTTP Trigger: TGGGGTAGTGACTTTCCTCCAGATTGTTGGTGTCTG...TATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRCPFHC*AECNSS Trigger: TGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCA...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CCA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQDRSQI*FLPAAC Trigger: ACATGCGGCGGGGAGAAACCATATTTGAGATCGATC...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTTCGCTGAGAATTGATTaGTGGAAGGACAGGTTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAASLRID*WKDRFA Trigger: AGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGA...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR TCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGTCTGTCGCTGAGAATTaGTTGGTGGAAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRSVAEN*LVEGQV Trigger: AACCTGTCCTTCCACCAATCAATTCTCAGCGACAGA...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR GCA 90 bp | ATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGCTAATGTAACTCCTCAGTaGAGACACCAACAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IHGCLLYKLSHWKSPGAANVTPQ*RHQQSG Trigger: TCCAGATTGTTGGTGTCTGCACTGAGGAGTTACATT...AGCTGCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR GCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCCTCTCCTGTTGCAGGTaGGGATCGATCTCAAATATG | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSLSCCR*GSISNM Trigger: CATATTTGAGATCGATCCGCACCTGCAACAGGAGAG...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111867.9 |
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| CDS-3UTR GCA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGAACCGTCTGTCTCAATaGCTTTGTCAACTCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQNRLSQ*LCQLSP Trigger: AGGAGAGAGTTGACAAAGGCATTGAGACAGACGGTT...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | ATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACAGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: IILCLFTVTPACFLLHTTDTLRR*RAVPGE Trigger: TTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTC...TGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CCA 90 bp | AGTTTTAGTTACAGAAAGTCGAAGTCCCTTCCTTTCAGAATCTCTGGTCCTGTGAGTGCTCAGGGATGTTaGCAGAAGGACTCCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRKSKSLPFRISGPVSAQGC*QKDSPC Trigger: ACATGGGGAGTCCTTCTGCCAACATCCCTGAGCACT...CACAGGACCAGAGATTCTGAAAGGAAGGGACTTCGACTTTCTGTAACTAAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCCAGACACCAACAATCTaGAGGAAAGTCACTACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSQTPTI*RKVTTP Trigger: TGGGGTAGTGACTTTCCTCCAGATTGTTGGTGTCTG...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | AGATCTCCCTGTCTCTGCCTCCCAAGTGCTGGGATTAAAGTTGGGTATCAACATAGGGCTCCCGACTCTTaGTTAAATTTTAGATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: RSPCLCLPSAGIKVGYQHRAPDS*LNFRCT Trigger: CGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCT...ATGTTGATACCCAACTTTAATCCCAGCACTTGGGAGGCAGAGACAGGGAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR TCA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCATCTGTCGCTGAGAATTaGTTGGTGGAAGGACAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSSVAEN*LVEGQV Trigger: AACCTGTCCTTCCACCAATCAATTCTCAGCGACAGA...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | ATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACACACAGGCTGCATCTGTaGGTCCTCCGTCAGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IILCLFTVTPACFLLHTTHRLHL*VLRQQH Trigger: ATGCTGCTGACGGAGGACCCACAGATGCAGCCTGTG...TGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAGGGCTCCCGACTCTTaGTTAAATTTTAGATGCACG | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSRAPDS*LNFRCT Trigger: CGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCT...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| 3UTR CAA 72 bp | TCCTGCTTGCTTTCTCTTACACACCACAGACAGAGCTaGGTTCCCTTTTGGATGAAGGTCAAATTCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCLLSLTHHRQS*VPFWMKVKFSL Trigger: GAGAGAGAATTTGACCTTCATCCAAAAGGGAACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR GCA 90 bp | CACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCAATGTAACTCCTCAGTaGAGACACCAACAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLPFYSWVSPLQAVTLEVNVTPQ*RHQQSG Trigger: TCCAGATTGTTGGTGTCTGCACTGAGGAGTTACATT...GACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR GCA 90 bp | AACTTTCAGAAGACAAGAGTATGGCTGGAGATGTCCTTGTGGAAAGTTCCCAGGAACCGTCTGTCTCAATaGCTTTGTCAACTCTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: NFQKTRVWLEMSLWKVPRNRLSQ*LCQLSL Trigger: AAGAGAGAGTTGACAAAGGCATTGAGACAGACGGTT...CCTGGGAACTTTCCACAAGGACATCTCCAGCCATACTCTTGTCTTCTGAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSKAKST*SVCSCK Trigger: TTTACAGGAACAGACGGACCAAGTGGATTTGGCTTT...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | AGTTTTAGTTACAGAAAGTCGAAGTCCCTTCCTTTCAGAATCTCTGGTCCTGTGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: SFSYRKSKSLPFRISGPVDRSQI*FLPAAC Trigger: ACATGCGGCGGGGAGAAACCATATTTGAGATCGATC...CACAGGACCAGAGATTCTGAAAGGAAGGGACTTCGACTTTCTGTAACTAAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CCA 90 bp | TTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGAGCCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FYSWVSPLQAVTLEVTRSLRIDW*KDRFAV Trigger: AACAGCAAACCTGTCCTTCCACCAATCAATTCTCAG...GCTCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CCA 90 bp | ATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTACACACCACAAGTGCTCAGGGATGTTaGCAGAAGGACTCCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: IILCLFTVTPACFLLHTTSAQGC*QKDSPC Trigger: ACATGGGGAGTCCTTCTGCCAACATCCCTGAGCACT...TGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR CAA 72 bp | ATGTACAAAAGTCTGTTCATTGCAGCATTCAGATCTTaGTACAAAAGAAGTGGGTCTCCTGACAGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MYKSLFIAAFRS*YKRSGSPDRAP Trigger: AGGAGCCCTGTCAGGAGACCCACTTCTTTTGTACAAAGATCTGAATGCTGCAATGAACAGACTTTTGTACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| 3UTR CAA 72 bp | CAGTATAATTCTTTGCCTTTTTACTGTAACTCCTGCTaGCTTTCTCTTACACACCACAGACAGAGCTTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: QYNSLPFYCNSC*LSLTHHRQSLV Trigger: AACCAAGCTCTGTCTGTGGTGTGTAAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR GCA 90 bp | CAAAGCCAGTATAATTCTTTGCCTTTTTACTGTAACTCCTGCTTGCTTTCTCTTAATGTAACTCCTCAGTaGAGACACCAACAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSQYNSLPFYCNSCLLSLNVTPQ*RHQQSG Trigger: TCCAGATTGTTGGTGTCTGCACTGAGGAGTTACATT...AAGAGAAAGCAAGCAGGAGTTACAGTAAAAAGGCAAAGAATTATACTGGCTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| 3UTR CAA 72 bp | TTAAAAATCACTATGTACATGGCTTCTGCACCATCTTaGCTGAGCAATAAAAATACCATCCGGTTTCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: LKITMYMASAPS*LSNKNTIRFPQ Trigger: TTGTGGAAACCGGATGGTATTTTTATTGCTCAGCAAAGATGGTGCAGAAGCCATGTACATAGTGATTTTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS CCA 90 bp | GCGGGTTCGGCTGGTCAGGGTAGAGGCGGCGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAAAGAGTGAAGCAAAGGCCGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSAGQGRGGDTLRR*RAVPGERVKQRPEG Trigger: CCCCTCCGGCCTTTGCTTCACTCTTTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTCGCCGCCTCTACCCTGACCAGCCGAACCCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS TCA 90 bp | GATGCACGCTCTCGAGCTGCCGTGTGCGGATCAGCTCGTGGGGGATaGTGGCCGTGGAGCTGTCGCTGCCCAAACTGTCCTTGCGGCTCG | + |
|
Preference number: 5 (lower is better) Translates to: DARSRAAVCGSARGG*WPWSCRCPNCPCGS Trigger: CGAGCCGCAAGGACAGTTTGGGCAGCGACAGCTCCACGGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCATC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS GCA 90 bp | CCCGGATCTGCTCTGTGTCTTTGCCAGACAGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGCTATCCTCTTCATCCTCCGGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: PGSALCLCQTASEAV*RGRCSGYPLHPPEA Trigger: GGCCTCCGGAGGATGAAGAGGATAGCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGCTGTCTGGCAAAGACACAGAGCAGATCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS GCA 90 bp | GCCAGGGACCGCCAGCAATGGGCACTGTCCGTAGTAGTTCCAGGATaGCCTGCCCGTTCCACTGTTGGGCTGAATGTAACTCCTCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ARDRQQWALSVVVPG*PARSTVGLNVTPQC Trigger: GCACTGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACTACTACGGACAGTGCCCATTGCTGGCGGTCCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCTCCCACAAGGCTCACAGGCCCTCAGTCAGATTTCTGTCCCAACCTGGATCATCCCAGGCACACTaGGCACTGACGCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGSHKAHRPSVRFLSQPGSSQAH*ALTPLR Trigger: CCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGA...TCCAGGTTGGGACAGAAATCTGACTGAGGGCCTGTGAGCCTTGTGGGAGCCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS GCA 90 bp | AGGGCTCCCGACTCTTGGTTAAATTTTAGATGCACGCTCTCGAGCTaGCGTGTGCGGATCAGCTCGTGGGGGATGATGGCCGTGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RAPDSWLNFRCTLSS*RVRISSWGMMAVEL Trigger: CAGCTCCACGGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS GCA 90 bp | AGGCGGCAAGGGAGGAACAGGAGGAGGAGGAGAAGGAAGAGAGGCTaGGTCTCACTTGTAACCAGGGTCCGTGAGCTGCATACGGGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RRQGRNRRRRRRKRG*VSLVTRVRELHTGV Trigger: AACACCCGTATGCAGCTCACGGACCCTGGTTACAAGTGAGACGCAGCCTCTCTTCCTTCTCCTCCTCCTCCTGTTCCTCCCTTGCCGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS CCA 90 bp | AATTTTAGATGCACGCTCTCGAGCTGCCGTGTGCGGATCAGCTCGTaGGGGATGATGGCCGTGGAGCTGTCGCTGCCCAAACTGTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NFRCTLSSCRVRISS*GMMAVELSLPKLSL Trigger: CAAGGACAGTTTGGGCAGCGACAGCTCCACGGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCATCTAAAATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | CCTTCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCGCTCTGCTGGCCATGTaGGTGGGGCAGACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PSKANFCFFATPARVLKAALLAM*VGQTPQ Trigger: CTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAGC...GGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | GAAGGCCCTGTGCATCCCAAATGGCCCCAGGGCTTGAGGTTGCCACACAGACTTATCTGCTCTGTGTCTTaGCCAGACAGCCTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EGPVHPKWPQGLRLPHRLICSVS*PDSLRG Trigger: GCCTCGGAGGCTGTCTGGCAAAGACACAGAGCAGAT...AAGTCTGTGTGGCAACCTCAAGCCCTGGGGCCATTTGGGATGCACAGGGCCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS TCA 90 bp | GAGGAGAAGGAAGAGAGGCTGCGTCTCACTTGTAACCAGGGTCCGTaGGCTGCATACGGGTGTTCCTCAGTGGCAAAGGCGCCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: EEKEERLRLTCNQGP*AAYGCSSVAKAPST Trigger: AGTGGAAGGCGCCTTTGCCACTGAGGAACACCCGTATGCAGCTCACGGACCCTGGTTACAAGTGAGACGCAGCCTCTCTTCCTTCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS GCA 90 bp | GGACCGCCAGCAATGGGCACTGTCCGTAGTAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCTGAATGTAACTCCTCAGTGCAGACA | + |
|
Preference number: 5 (lower is better) Translates to: GPPAMGTVRSSSRMP*PFHCWAECNSSVQT Trigger: TGTCTGCACTGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACTACTACGGACAGTGCCCATTGCTGGCGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS-3UTR CAA 90 bp | TCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCCCTGGAGGCACCCGTTGTAGGCTTTGTCAACTCTCTCTaGCAGGTGCGGATCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SLRPQPEFSRPLEAPVVGFVNSL*QVRIDL Trigger: GAGATCGATCCGCACCTGCAAGAGAGAGTTGACAAA...GCCTACAACGGGTGCCTCCAGGGGCCTTGAGAACTCTGGCTGGGGTCGCAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS GCA 90 bp | CTACAGAAGGTGTTCTCTGACTGGAAGACATATCGGGCTAGGCCCTaGATCAGCTCTGCTGGCCATGTTGGTGGGGCAGACTCCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQKVFSDWKTYRARP*ISSAGHVGGADSPV Trigger: AACTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAGCTGATGCAGGGCCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTTCTGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 90 bp | CTGTGCCAAGACACATGGTCCCCGCTACAGAAGGTGTTCTCTGACTaGAAGACATATCGGGCTAGGCCCTGCATCAGCTCTGCTGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LCQDTWSPLQKVFSD*KTYRARPCISSAGH Trigger: ATGGCCAGCAGAGCTGATGCAGGGCCTAGCCCGATATGTCTTCCAGTCAGAGAACACCTTCTGTAGCGGGGACCATGTGTCTTGGCACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 90 bp | AGCCCTGTCGTGGGTGAGGCCGTTCTGTCGCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTTAATCTCCAGTCCCCGCCTCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: SPVVGEAVLSLRIDW*KDRFAVNLQSPPQG Trigger: ACCCTGAGGCGGGGACTGGAGATTAACAGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGACAGAACGGCCTCACCCACGACAGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 90 bp | AGGAGTCTGCCCCTTAGGCAGAGAGGGATGAGGGCTCCCGACTCTTaGTTAAATTTTAGATGCACGCTCTCGAGCTGCCGTGTGCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RSLPLRQRGMRAPDS*LNFRCTLSSCRVRI Trigger: GATCCGCACACGGCAGCTCGAGAGCGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCTCATCCCTCTCTGCCTAAGGGGCAGACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGACAGCGACGGGAGATGGGGACAGAATGGATGTGAGAAAGAGGAAGGGCAGTGCTCAGGGATGTaGGCAGAAGGACTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GRDSDGRWGQNGCEKEEGQCSGM*AEGLPM Trigger: CATGGGGAGTCCTTCTGCCAACATCCCTGAGCACTG...CCCTTCCTCTTTCTCACATCCATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
||
| CDS-3UTR CAA 90 bp | GGGAGAACTGAGTGCTGGACAAGCCATCAGGTTCTGCTCAATGGTTTCCATCAGTCATCCCAGGCACACTaGGCACTGACGCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRTECWTSHQVLLNGFHQSSQAH*ALTPLR Trigger: CCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGA...CTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCAGCACTCAGTTCTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
||
| CDS-3UTR CAA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGCCTGTAAACCAGTACTaGACGATAGCGGTAACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SQSPGSRKEGRATLTQSEPVNQY*TIAVTW Trigger: CCAGGTTACCGCTATCGTCAAGTACTGGTTTACAGG...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS CCA 90 bp | GGCACTGTCCGTAGTAGTTCCAGGATGCCCTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCAGTGCAGACACCAACAATCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GTVRSSSRMPCPFHC*AECNSSVQTPTIWR Trigger: CCTCCAGATTGTTGGTGTCTGCACTGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACTACTACGGACAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGCTCTGCTGGCCATGTaGGTGGGGCAGACTCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQALLAM*VGQTPQ Trigger: CTGGGGAGTCTGCCCCACCAACATGGCCAGCAGAGC...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CAA 90 bp | AGCCAGAGCCCAGGCTCCAGGAAGGAAGGAAGGGCAACTCTGACCCAGAGTGAGTCTGTCTCAATGCCTTaGTCAACTCTCTCCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPGSRKEGRATLTQSESVSMP*STLSCC Trigger: GCAACAGGAGAGAGTTGACAAAGGCATTGAGACAGA...CTCACTCTGGGTCAGAGTTGCCCTTCCTTCCTTCCTGGAGCCTGGGCTCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS TCA 90 bp | AGGCTGCATCTGTGGGTCCTCCGTCAGCAGCATGTGCTGAATTCTTaGCTCACTGTTATCCAAAGGGCTGTGCCAAGACACATGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLHLWVLRQQHVLNS*LTVIQRAVPRHMVP Trigger: GGGGACCATGTGTCTTGGCACAGCCCTTTGGATAACAGTGAGTCAAGAATTCAGCACATGCTGCTGACGGAGGACCCACAGATGCAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 90 bp | TGCCTTTGTCAACTCTCTCTTGCAGGTGCGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGTCAGTTATCAGCCAGGGACCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: CLCQLSLAGADRSQI*FLPAACQLSARDRQ Trigger: CTGGCGGTCCCTGGCTGATAACTGACATGCGGCGGGGAGAAACCATATTTGAGATCGATCCGCACCTGCAAGAGAGAGTTGACAAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000118440.3 |
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| CDS CCA 90 bp | CTTTGTCAACTCTCTCCTGTTGCAGGTGCGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGTCAGTTATCAGCCAGGGACCGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCQLSPVAGADRSQI*FLPAACQLSARDRQ Trigger: CTGGCGGTCCCTGGCTGATAACTGACATGCGGCGGGGAGAAACCATATTTGAGATCGATCCGCACCTGCAACAGGAGAGAGTTGACAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111867.9 ENSMUST00000120778.8 |
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| CDS-3UTR CAA 90 bp | TGTAGAGCAGGCTGGCCTCAAATTCATAGATCTCCCTGTCTCTGCCTCCCAAGTCAGTGCTCAGGGATGTaGGCAGAAGGACTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: CRAGWPQIHRSPCLCLPSQCSGM*AEGLPM Trigger: CATGGGGAGTCCTTCTGCCAACATCCCTGAGCACTG...ACTTGGGAGGCAGAGACAGGGAGATCTATGAATTTGAGGCCAGCCTGCTCTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | ATACCATCCGGTTTCCACAAGAAAAAGAACAATCATTCGGCAGGGTGGAGCAGCTCATCCCAGGCACACTaGGCACTGACGCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSGFHKKKNNHSAGWSSSSQAH*ALTPLR Trigger: CCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGA...GCTGCTCCACCCTGCCGAATGATTGTTCTTTTTCTTGTGGAAACCGGATGGTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | CAGAAGTGCAGTGCAGCTGTGAGGACAGCAGCACCCATACTCACAACCTCTATAATCTGCTCTGTGTCTTaGCCAGACAGCCTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QKCSAAVRTAAPILTTSIICSVS*PDSLRG Trigger: GCCTCGGAGGCTGTCTGGCAAAGACACAGAGCAGAT...TATAGAGGTTGTGAGTATGGGTGCTGCTGTCCTCACAGCTGCACTGCACTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | TCAGGTTCTCTCCCAGCTCTCAATCTCAAAACCCAAGCCCCGGCTCCAGGGTCTTCTGTCTCAATGCCTTaGTCAACTCTCTCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGSLPALNLKTQAPAPGSSVSMP*STLSCR Trigger: CCTGCAAGAGAGAGTTGACAAAGGCATTGAGACAGA...AGACCCTGGAGCCGGGGCTTGGGTTTTGAGATTGAGAGCTGGGAGAGAACCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | CCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGATCATCCCAGGCACACTaGGCACTGACGCCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFIHGCLLYKLSHWKSPGSSQAH*ALTPLR Trigger: CCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGA...TCCTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
||
| CDS-3UTR CAA 90 bp | CCTTCAAAGGCCAATTTCTGCTTCTTTGCGACCCCAGCCAGAGTTCTCAAGGCCGGTGGAAGGACAGGTTaGCTGTTAATCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSKANFCFFATPARVLKAGGRTG*LLISSP Trigger: GGGACTGGAGATTAACAGCAAACCTGTCCTTCCACC...GGCCTTGAGAACTCTGGCTGGGGTCGCAAAGAAGCAGAAATTGGCCTTTGAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGGGTGGAAGGACAGGTTaGCTGTTAATCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: HTHVKNSADPRLGNPQSQGGRTG*LLISSP Trigger: GGGACTGGAGATTAACAGCAAACCTGTCCTTCCACC...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | CCTAGGCCATTATACTGTGCAAGAAGGGAGTTCCCAGCCCACCACTTCCCTTCTGGTGGAAGGACAGGTTaGCTGTTAATCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRPLYCARREFPAHHFPSGGRTG*LLISSP Trigger: GGGACTGGAGATTAACAGCAAACCTGTCCTTCCACC...AGAAGGGAAGTGGTGGGCTGGGAACTCCCTTCTTGCACAGTATAATGGCCTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS-3UTR CAA 90 bp | CACAAGAGGGCCAGGCTACAGGAAGAGACAGCGACGGGAGATGGGGACAGAATGGGCCAGCTGTACTCTTaGGGAAGTTTAAATTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: HKRARLQEETATGDGDRMGQLYS*GSLNSS Trigger: AGAGGAATTTAAACTTCCCAAAGAGTACAGCTGGCC...CATTCTGTCCCCATCTCCCGTCGCTGTCTCTTCCTGTAGCCTGGCCCTCTTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | CATACCCATGTTAAGAACAGCGCAGACCCCAGACTGGGCAATCCACAAAGCCAGTTTGTCAACTCTCTCTaGCAGGTGCGGATCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HTHVKNSADPRLGNPQSQFVNSL*QVRIDL Trigger: GAGATCGATCCGCACCTGCAAGAGAGAGTTGACAAA...CTGGCTTTGTGGATTGCCCAGTCTGGGGTCTGCGCTGTTCTTAACATGGGTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | TGGACAAGCCATCAGGTTCTGCTCAATGGTTTCCATCAGGAGCAAAGGGGGCACTCTGTCTCAATGCCTTaGTCAACTCTCTCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTSHQVLLNGFHQEQRGHSVSMP*STLSCR Trigger: CCTGCAAGAGAGAGTTGACAAAGGCATTGAGACAGA...GTGCCCCCTTTGCTCCTGATGGAAACCATTGAGCAGAACCTGATGGCTTGTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS-3UTR CAA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACAGTGCTCAGGGATGTaGGCAGAAGGACTCCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSQCSGM*AEGLPM Trigger: CATGGGGAGTCCTTCTGCCAACATCCCTGAGCACTG...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CAA 90 bp | ACTTGCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCAATCTGCTCTGTGTCTTaGCCAGACAGCCTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: TCPFIHGCLLYKLSHWKSICSVS*PDSLRG Trigger: GCCTCGGAGGCTGTCTGGCAAAGACACAGAGCAGAT...TGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGCAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGGTGGAAGGACAGGTTaGCTGTTAATCTCCAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQGGRTG*LLISSP Trigger: GGGACTGGAGATTAACAGCAAACCTGTCCTTCCACC...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS-3UTR CAA 90 bp | AGTTTTAGTTACAGAAAGTCGAAGTCCCTTCCTTTCAGAATCTCTGGTCCTGTGATCTGCTCTGTGTCTTaGCCAGACAGCCTCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFSYRKSKSLPFRISGPVICSVS*PDSLRG Trigger: GCCTCGGAGGCTGTCTGGCAAAGACACAGAGCAGAT...CACAGGACCAGAGATTCTGAAAGGAAGGGACTTCGACTTTCTGTAACTAAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039922.13 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGTCTGTCTCAATGCCTTaGTCAACTCTCTCCTGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQSVSMP*STLSCC Trigger: GCAACAGGAGAGAGTTGACAAAGGCATTGAGACAGA...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111867.9 |
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| CDS-3UTR CAA 90 bp | GCCCTTTTATTCATGGGTGTCTCCTTTACAAGCTGTCACACTGGAAGTCACCAGGGCCAGCTGTACTCTTaGGGAAGTTTAAATTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALLFMGVSFTSCHTGSHQGQLYS*GSLNSS Trigger: AGAGGAATTTAAACTTCCCAAAGAGTACAGCTGGCC...CTGGTGACTTCCAGTGTGACAGCTTGTAAAGGAGACACCCATGAATAAAAGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS CCA 90 bp | AGTTTCTCTCTTCAGACGAAACGTCAACTCAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAACTCATGGACTCTGTTGTCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: SFSLQTKRQLKAKST*SVCSCKLMDSVVTI Trigger: TATGGTGACAACAGAGTCCATGAGTTTACAGGAACAGACGGACCAAGTGGATTTGGCTTTGAGTTGACGTTTCGTCTGAAGAGAGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS GCA 72 bp | TGCCAGACAGCCTCCGAGGCTGTGTGCCGAGGCAGATaGTCCGGCTATCCTCTTCATCCTCCGGAGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CQTASEAVCRGR*SGYPLHPPEAG Trigger: GCCGGCCTCCGGAGGATGAAGAGGATAGCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGCTGTCTGGCA 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | TGCACGCTCTCGAGCTGCCGTGTGCGGATCAGCTCGTaGGGGATGATGGCCGTGGAGCTGTCGCTGCCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: CTLSSCRVRISS*GMMAVELSLPK Trigger: TTTGGGCAGCGACAGCTCCACGGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CAA 72 bp | ATGATGGCCGTGGAGCTGTCGCTGCCCAAACTGTCCTaGCGGCTCGGAGCCCTGTCGTGGGTGAGGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: MMAVELSLPKLS*RLGALSWVRPF Trigger: GAACGGCCTCACCCACGACAGGGCTCCGAGCCGCAAGGACAGTTTGGGCAGCGACAGCTCCACGGCCATCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS TCA 72 bp | TCTCGAGCTGCCGTGTGCGGATCAGCTCGTGGGGGATaGTGGCCGTGGAGCTGTCGCTGCCCAAACTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRAAVCGSARGG*WPWSCRCPNCP Trigger: AGGACAGTTTGGGCAGCGACAGCTCCACGGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CAA 72 bp | TCCTCCGGAGGCCGGCTGAGGTCATCCCAGGCACACTaGGCACTGACGCCGCTCAGGTTAGAACCGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SSGGRLRSSQAH*ALTPLRLEPSV Trigger: GACAGACGGTTCTAACCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGACCTCAGCCGGCCTCCGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | GCTGGTCAGGGTAGAGGCGGCGACACTCTCCGTAGATaGCGTGCAGTCCCGGGGGAAAGAGTGAAGCAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: AGQGRGGDTLRR*RAVPGERVKQR Trigger: CCTTTGCTTCACTCTTTCCCCCGGGACTGCACGCCATCTACGGAGAGTGTCGCCGCCTCTACCCTGACCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | ACCAGGGTCCGTGAGCTGCATACGGGTGTTCCTCAGTaGCAAAGGCGCCTTCCACTCCCGTGGACACAAACG | + |
|
Preference number: 6 (lower is better) Translates to: TRVRELHTGVPQ*QRRLPLPWTQT Trigger: CGTTTGTGTCCACGGGAGTGGAAGGCGCCTTTGCCACTGAGGAACACCCGTATGCAGCTCACGGACCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CAA 90 bp | TCCTCTTCATCCTCCGGAGGCCGGCTGAGGTCATCCCAGGCACACTaGGCACTGACGCCGCTCAGGTTAGAACCGTCTGTCTCAATGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SSSSSGGRLRSSQAH*ALTPLRLEPSVSMP Trigger: AGGCATTGAGACAGACGGTTCTAACCTGAGCGGCGTCAGTGCCAAGTGTGCCTGGGATGACCTCAGCCGGCCTCCGGAGGATGAAGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS GCA 72 bp | GCTCTGTGTCTTTGCCAGACAGCCTCCGAGGCTGTGTaGCGAGGCAGATGCTCCGGCTATCCTCTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALCLCQTASEAV*RGRCSGYPLHP Trigger: AGGATGAAGAGGATAGCCGGAGCATCTGCCTCGGCACACAGCCTCGGAGGCTGTCTGGCAAAGACACAGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS TCA 72 bp | GAAGAGAGGCTGCGTCTCACTTGTAACCAGGGTCCGTaGGCTGCATACGGGTGTTCCTCAGTGGCAAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: EERLRLTCNQGP*AAYGCSSVAKA Trigger: CGCCTTTGCCACTGAGGAACACCCGTATGCAGCTCACGGACCCTGGTTACAAGTGAGACGCAGCCTCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS GCA 72 bp | GGGAGGAACAGGAGGAGGAGGAGAAGGAAGAGAGGCTaGGTCTCACTTGTAACCAGGGTCCGTGAGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GRNRRRRRRKRG*VSLVTRVRELH Trigger: ATGCAGCTCACGGACCCTGGTTACAAGTGAGACGCAGCCTCTCTTCCTTCTCCTCCTCCTCCTGTTCCTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118440.3 |
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| CDS GCA 72 bp | GGGATGAGGGCTCCCGACTCTTGGTTAAATTTTAGATaGACGCTCTCGAGCTGCCGTGTGCGGATCAGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: GMRAPDSWLNFR*TLSSCRVRISS Trigger: CGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCTCATCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS GCA 72 bp | GCAATGGGCACTGTCCGTAGTAGTTCCAGGATGCCCTaGCCGTTCCACTGTTGGGCTGAATGTAACTCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: AMGTVRSSSRMP*PFHCWAECNSS Trigger: TGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACTACTACGGACAGTGCCCATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS GCA 72 bp | GACTCTTGGTTAAATTTTAGATGCACGCTCTCGAGCTaGCGTGTGCGGATCAGCTCGTGGGGGATGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: DSWLNFRCTLSS*RVRISSWGMMA Trigger: GGCCATCATCCCCCACGAGCTGATCCGCACACGGCAGCTCGAGAGCGTGCATCTAAAATTTAACCAAGAGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CCA 72 bp | CCCCTTAGGCAGAGAGGGATGAGGGCTCCCGACTCTTaGTTAAATTTTAGATGCACGCTCTCGAGCTGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: PLRQRGMRAPDS*LNFRCTLSSCR Trigger: ACGGCAGCTCGAGAGCGTGCATCTAAAATTTAACCAAGAGTCGGGAGCCCTCATCCCTCTCTGCCTAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CAA 90 bp | CAGGCTGCATCTGTGGGTCCTCCGTCAGCAGCATGTGCTGAATTCTaGACTCACTGTTATCCAAAGGGCTGTGCCAAGACACATGGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QAASVGPPSAACAEF*THCYPKGCAKTHGP Trigger: GGGACCATGTGTCTTGGCACAGCCCTTTGGATAACAGTGAGTCAAGAATTCAGCACATGCTGCTGACGGAGGACCCACAGATGCAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | CGTAGTAGTTCCAGGATGCCCTGCCCGTTCCACTGTTaGGCTGAATGTAACTCCTCAGTGCAGACACCAACA | + |
|
Preference number: 6 (lower is better) Translates to: RSSSRMPCPFHC*AECNSSVQTPT Trigger: TGTTGGTGTCTGCACTGAGGAGTTACATTCAGCCCAACAGTGGAACGGGCAGGGCATCCTGGAACTACTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | GTGGGTGAGGCCGTTCTGTCGCTGAGAATTGATTGGTaGAAGGACAGGTTTGCTGTTAATCTCCAGTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VGEAVLSLRIDW*KDRFAVNLQSP Trigger: CGGGGACTGGAGATTAACAGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGACAGAACGGCCTCACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | CTCTCTCCTGTTGCAGGTGCGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGTCAGTTATCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPVAGADRSQI*FLPAACQLSAR Trigger: CCTGGCTGATAACTGACATGCGGCGGGGAGAAACCATATTTGAGATCGATCCGCACCTGCAACAGGAGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111867.9 ENSMUST00000120778.8 |
||
| CDS CAA 72 bp | ACGCCGCTCAGGTTAGAACCGTCTGTCTCAATGCCTTaGTCAACTCTCTCCTGTTGCAGGTGCGGATCGATC | + |
|
Preference number: 6 (lower is better) Translates to: TPLRLEPSVSMP*STLSCCRCGSI Trigger: GATCGATCCGCACCTGCAACAGGAGAGAGTTGACAAAGGCATTGAGACAGACGGTTCTAACCTGAGCGGCGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111867.9 ENSMUST00000120778.8 |
||
| CDS TCA 72 bp | CTGTGGGTCCTCCGTCAGCAGCATGTGCTGAATTCTTaGCTCACTGTTATCCAAAGGGCTGTGCCAAGACAC | + |
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Preference number: 6 (lower is better) Translates to: LWVLRQQHVLNS*LTVIQRAVPRH Trigger: GTGTCTTGGCACAGCCCTTTGGATAACAGTGAGTCAAGAATTCAGCACATGCTGCTGACGGAGGACCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | GACTCACTGTTATCCAAAGGGCTGTGCCAAGACACATaGTCCCCGCTACAGAAGGTGTTCTCTGACTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: DSLLSKGLCQDT*SPLQKVFSDWK Trigger: CTTCCAGTCAGAGAACACCTTCTGTAGCGGGGACCATGTGTCTTGGCACAGCCCTTTGGATAACAGTGAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CCA 72 bp | CAACTCTCTCTTGCAGGTGCGGATCGATCTCAAATATaGTTTCTCCCCGCCGCATGTCAGTTATCAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: QLSLAGADRSQI*FLPAACQLSAR Trigger: CCTGGCTGATAACTGACATGCGGCGGGGAGAAACCATATTTGAGATCGATCCGCACCTGCAAGAGAGAGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000118440.3 |
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| CDS CCA 72 bp | GTCGTGGGTGAGGCCGTTCTGTCGCTGAGAATTGATTaGTGGAAGGACAGGTTTGCTGTTAATCTCCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: VVGEAVLSLRID*WKDRFAVNLQS Trigger: GGACTGGAGATTAACAGCAAACCTGTCCTTCCACCAATCAATTCTCAGCGACAGAACGGCCTCACCCACGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 ENSMUST00000120778.8 |
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| CDS CAA 72 bp | ACGCCGCTCAGGTTAGAACCGTCTGTCTCAATGCCTTaGTCAACTCTCTCTTGCAGGTGCGGATCGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: TPLRLEPSVSMP*STLSCRCGSIS Trigger: TGAGATCGATCCGCACCTGCAAGAGAGAGTTGACAAAGGCATTGAGACAGACGGTTCTAACCTGAGCGGCGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000118440.3 |
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| CDS CAA 72 bp | GGACTGTCGAACACCACGTCGGGGAGAATGGACACTTaGAGTTTCTTCTCAGGCCAGCTGTACTCTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GLSNTTSGRMDT*SFFSGQLYSLG Trigger: TCCCAAAGAGTACAGCTGGCCTGAGAAGAAACTCAAAGTGTCCATTCTCCCCGACGTGGTGTTCGACAGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS TCA 72 bp | AACTCTTCTGTCAACAGAATTTGTAACCAGGGTCCGTaGGCTGCATACGGGTGTTCCTCAGTGGCAAAGGCG | + |
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Preference number: 6 (lower is better) Translates to: NSSVNRICNQGP*AAYGCSSVAKA Trigger: CGCCTTTGCCACTGAGGAACACCCGTATGCAGCTCACGGACCCTGGTTACAAATTCTGTTGACAGAAGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS TCA 72 bp | GACTGTCGAACACCACGTCGGGGAGAATGGACACTTTaGGTTTCTTCTCAGGCCAGCTGTACTCTTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: DCRTPRRGEWTL*VSSQASCTLWE Trigger: TTCCCAAAGAGTACAGCTGGCCTGAGAAGAAACTCAAAGTGTCCATTCTCCCCGACGTGGTGTTCGACAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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| CDS CCA 72 bp | CTTCAGACGAAACGTCAACTCAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAACTCATGGACTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: LQTKRQLKAKST*SVCSCKLMDSV Trigger: AACAGAGTCCATGAGTTTACAGGAACAGACGGACCAAGTGGATTTGGCTTTGAGTTGACGTTTCGTCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 ENSMUST00000118440.3 |
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| CDS CCA 72 bp | CTTCAGACGAAACGTCAACTCAAAGCCAAATCCACTTaGTCCGTCTGTTCCTGTAAACCAGTACTTGACGAT | + |
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Preference number: 6 (lower is better) Translates to: LQTKRQLKAKST*SVCSCKPVLDD Trigger: ATCGTCAAGTACTGGTTTACAGGAACAGACGGACCAAGTGGATTTGGCTTTGAGTTGACGTTTCGTCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120778.8 |
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| CDS CAA 72 bp | GACACTTTGAGTTTCTTCTCAGGCCAGCTGTACTCTTaGGGAAGTTTAAATTCCTCTGGAGAGGTTAGATCT | + |
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Preference number: 6 (lower is better) Translates to: DTLSFFSGQLYS*GSLNSSGEVRS Trigger: AGATCTAACCTCTCCAGAGGAATTTAAACTTCCCAAAGAGTACAGCTGGCCTGAGAAGAAACTCAAAGTGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039922.13 ENSMUST00000111867.9 |
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