Pregenerated sensors for SUCO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040297Ensembl transcript IDs: ENSMUST00000048377.11, ENSMUST00000191975.2, ENSMUST00000192570.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGACTTCTCAAGGGCCTGCTGTGTACCACCAGGCCATATTGCTCTaGATGGCTAATTGTGCAGACTGGGAGAGGGGAAATTCATTTCCT | + |
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Preference number: 1 (lower is better) Translates to: WTSQGPAVYHQAILL*MANCADWERGNSFP Trigger: AGGAAATGAATTTCCCCTCTCCCAGTCTGCACAATTAGCCATTCAGAGCAATATGGCCTGGTGGTACACAGCAGGCCCTTGAGAAGTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR GCA 90 bp | ACATCTGGACTTCTCAAGGGCCTGCTGTGTACCACCAGGCCATATTaGTCTGAATGGCTAATTGTGCAGACTGGGAGAGGGGAAATTCAT | + |
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Preference number: 1 (lower is better) Translates to: TSGLLKGLLCTTRPY*SEWLIVQTGRGEIH Trigger: ATGAATTTCCCCTCTCCCAGTCTGCACAATTAGCCATTCAGAGCAATATGGCCTGGTGGTACACAGCAGGCCCTTGAGAAGTCCAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 90 bp | CCTGACGTGCTCACTGGCTGGTTCTGTGACTATGTACAAAGGCAGTaGCAGGACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGG | + |
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Preference number: 1 (lower is better) Translates to: PDVLTGWFCDYVQRQ*QDHGKPGLGDVKIW Trigger: CCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTCCTGTCACTGCCTTTGTACATAGTCACAGAACCAGCCAGTGAGCACGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 90 bp | AAAAGGCACATAAATATGGGAAGGTGCAAGAAACGGGAACCAAGCTaGAGGAGAGGTTTAGGCTTTCGTTCCTATCCACCCAAGGAACTG | + |
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Preference number: 1 (lower is better) Translates to: KRHINMGRCKKREPS*RRGLGFRSYPPKEL Trigger: CAGTTCCTTGGGTGGATAGGAACGAAAGCCTAAACCTCTCCTTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTATGTGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR CCA 90 bp | TTTAGGATCTTTATGCAAATGACCCACATTGCTGAGCTTCAGGCATaGACCACCTTAAAGCTTTGTAGTGTTTGCAGCTTCAAAAACCTA | + |
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Preference number: 1 (lower is better) Translates to: FRIFMQMTHIAELQA*TTLKLCSVCSFKNL Trigger: TAGGTTTTTGAAGCTGCAAACACTACAAAGCTTTAAGGTGGTCCATGCCTGAAGCTCAGCAATGTGGGTCATTTGCATAAAGATCCTAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 90 bp | CATACTGGTTTGAGTATGTCTTATCTGAAACACTTGAGAAGTGTTTaGAGACTTTCGGATTCTGTTAATTATATTTGCTGGGTAGGCATC | + |
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Preference number: 1 (lower is better) Translates to: HTGLSMSYLKHLRSV*RLSDSVNYICWVGI Trigger: GATGCCTACCCAGCAAATATAATTAACAGAATCCGAAAGTCTTCAAACACTTCTCAAGTGTTTCAGATAAGACATACTCAAACCAGTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR GCA 90 bp | ATTGCTGAGCTTCAGGCATGGACCACCTTAAAGCTTTGTAGTGTTTaGAGCTTCAAAAACCTAATAAAGTTACAAAACAAATCAAATGAC | + |
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Preference number: 1 (lower is better) Translates to: IAELQAWTTLKLCSV*SFKNLIKLQNKSND Trigger: GTCATTTGATTTGTTTTGTAACTTTATTAGGTTTTTGAAGCTGCAAACACTACAAAGCTTTAAGGTGGTCCATGCCTGAAGCTCAGCAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTAATGACCCACATTGCTaGGCTTCAGGCATGGACCAC | + |
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Preference number: 2 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLNDPHC*ASGMDH Trigger: GTGGTCCATGCCTGAAGCTCAGCAATGTGGGTCATT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACGCTGAGCTTCAGGCATaGACCACCTTAAAGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DHGKPGLGDVKIWRISVYAELQA*TTLKLC Trigger: ACAAAGCTTTAAGGTGGTCCATGCCTGAAGCTCAGC...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR TCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACGGATCTTTATGCAAATaGCCCACATTGCTGAGCTTC | + |
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Preference number: 2 (lower is better) Translates to: DHGKPGLGDVKIWRISVYGSLCK*PTLLSF Trigger: GAAGCTCAGCAATGTGGGTCATTTGCATAAAGATCC...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACATCCACCCAAGGAACTaGGCTTCCAAATTACTTTTG | + |
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Preference number: 2 (lower is better) Translates to: DHGKPGLGDVKIWRISVYIHPRN*ASKLLL Trigger: CAAAAGTAATTTGGAAGCCCAGTTCCTTGGGTGGAT...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAAAAACGGGAACCAAGCTaGAGGAGAGGTTTAGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: SLKHISLSLIPVQSHIKKKREPS*RRGLGF Trigger: AAAGCCTAAACCTCTCCTTCAGCTTGGTTCCCGTTT...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTAAAACCTGGTCTTGGTaGTGTGAAAATTTGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLKTWSW*CENLED Trigger: ATCCTCCAAATTTTCACATCACCAAGACCAGGTTTT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR GCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAATAAATATGGGAAGGTaGAAGAAACGGGAACCAAGC | + |
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Preference number: 2 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKINMGR*KKREPS Trigger: GCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTAT...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACTCATCAGCCAAGATTaGCACAATCCTGTCTACTTT | + |
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Preference number: 2 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLISQD*HNPVYF Trigger: AAAGTAGACAGGATTGTGTCAATCTTGGCTGATGAG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR GCA 72 bp | CTTCTCAAGGGCCTGCTGTGTACCACCAGGCCATATTaGTCTGAATGGCTAATTGTGCAGACTGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLKGLLCTTRPY*SEWLIVQTGRG Trigger: CCCTCTCCCAGTCTGCACAATTAGCCATTCAGAGCAATATGGCCTGGTGGTACACAGCAGGCCCTTGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 72 bp | CAAGGGCCTGCTGTGTACCACCAGGCCATATTGCTCTaGATGGCTAATTGTGCAGACTGGGAGAGGGGAAAT | + |
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Preference number: 3 (lower is better) Translates to: QGPAVYHQAILL*MANCADWERGN Trigger: ATTTCCCCTCTCCCAGTCTGCACAATTAGCCATTCAGAGCAATATGGCCTGGTGGTACACAGCAGGCCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 72 bp | CTCACTGGCTGGTTCTGTGACTATGTACAAAGGCAGTaGCAGGACCATGGAAAACCTGGTCTTGGTGATGTG | + |
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Preference number: 3 (lower is better) Translates to: LTGWFCDYVQRQ*QDHGKPGLGDV Trigger: CACATCACCAAGACCAGGTTTTCCATGGTCCTGTCACTGCCTTTGTACATAGTCACAGAACCAGCCAGTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 72 bp | ATAAATATGGGAAGGTGCAAGAAACGGGAACCAAGCTaGAGGAGAGGTTTAGGCTTTCGTTCCTATCCACCC | + |
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Preference number: 3 (lower is better) Translates to: INMGRCKKREPS*RRGLGFRSYPP Trigger: GGGTGGATAGGAACGAAAGCCTAAACCTCTCCTTCAGCTTGGTTCCCGTTTCTTGCACCTTCCCATATTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 72 bp | AGGAATCACAATCCCATTAGACTTTACCAATTAGACTaGATCAGGCCTGACGTGCTCACTGGCTGGTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: RNHNPIRLYQLD*IRPDVLTGWFC Trigger: ACAGAACCAGCCAGTGAGCACGTCAGGCCTGATTCAGTCTAATTGGTAAAGTCTAATGGGATTGTGATTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR TCA 72 bp | GTTCTAAGTTGGAAGTCTTTAGGATCTTTATGCAAATaGCCCACATTGCTGAGCTTCAGGCATGGACCACCT | + |
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Preference number: 3 (lower is better) Translates to: VLSWKSLGSLCK*PTLLSFRHGPP Trigger: AGGTGGTCCATGCCTGAAGCTCAGCAATGTGGGTCATTTGCATAAAGATCCTAAAGACTTCCAACTTAGAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR CCA 72 bp | TTTATGCAAATGACCCACATTGCTGAGCTTCAGGCATaGACCACCTTAAAGCTTTGTAGTGTTTGCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: FMQMTHIAELQA*TTLKLCSVCSF Trigger: GAAGCTGCAAACACTACAAAGCTTTAAGGTGGTCCATGCCTGAAGCTCAGCAATGTGGGTCATTTGCATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR GCA 72 bp | TGGCAAGAATCTTCTCTCATTAAAGGTCTGAGACTTTaGCGCTTAGTTTTCTTCCCTCTTACATGTAGTTAT | + |
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Preference number: 3 (lower is better) Translates to: WQESSLIKGLRL*RLVFFPLTCSY Trigger: ATAACTACATGTAAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTCTTGCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACTGAGCGGTTCTAAGTaGGAAGTCTTTAGGATCTTT | + |
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Preference number: 3 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLSGSK*EVFRIF Trigger: AAAGATCCTAAAGACTTCCAACTTAGAACCGCTCAG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| 3UTR CCA 72 bp | TTTGATTGTTACCTTTTAGAAACACAAATTTGCTCCTaGCAAGAATCTTCTCTCATTAAAGGTCTGAGACTT | + |
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Preference number: 3 (lower is better) Translates to: FDCYLLETQICS*QESSLIKGLRL Trigger: AAGTCTCAGACCTTTAATGAGAGAAGATTCTTGCCAGGAGCAAATTTGTGTTTCTAAAAGGTAACAATCAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTTCCACTGGAGCATCTaGATCAGGAGCCTCCCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLFHWSI*IRSLPS Trigger: GCTGGGGAGGCTCCTGATGCAGATGCTCCAGTGGAA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACATGTTGGTCAGTTGTaGCTGGAGCAAGTGGATGGC | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEHVGQL*LEQVDG Trigger: GCCATCCACTTGCTCCAGGCACAACTGACCAACATG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTGTGCCTGGAGCAAGTaGATGGCTTCAGTTTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLCAWSK*MASVCR Trigger: GCGGCAAACTGAAGCCATCCACTTGCTCCAGGCACA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTATGCAGGCTCGGCAATaGCCCCGACTTAGTCTGTAT | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLMQARQ*PRLSLY Trigger: ATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCAT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAGTAGTTCGACAGCGTTaGATACAGAGCATCAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEVVRQR*IQSISP Trigger: GGGACTGATGCTCTGTATGCAACGCTGTCGAACTAC...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATTGGTCAGTTGTGCCTaGAGCAAGTGGATGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKELVSCA*SKWMAS Trigger: TGAAGCCATCCACTTGCTCCAGGCACAACTGACCAA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAATCGCCACTGGGAGGCTaGGGTACTGAAACCTCTACT | + |
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Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKSPLGG*GTETST Trigger: AGTAGAGGTTTCAGTACCGCAGCCTCCCAGTGGCGA...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACCCTTTGATTATGTCATaGAGGCTCGGCAATGACCCC | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYPLIMS*RLGNDP Trigger: GGGGTCATTGCCGAGCCTGCATGACATAATCAAAGG...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACTGCTGTAACCCCAAATaGTCCCACGGTGATCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYCCNPK*SHGDLL Trigger: AAGGAGATCACCGTGGGAGCATTTGGGGTTACAGCA...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACGATATGTCCCGAGACTaGTGTAACCCCAAATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYDMSRD*CNPKCS Trigger: GGAGCATTTGGGGTTACAGCAGTCTCGGGACATATC...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACCAAGCTGTGTCATGTTaGTCAGTTGTGCCTGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYQAVSC*SVVPGA Trigger: TGCTCCAGGCACAACTGACCAACATGACACAGCTTG...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTCCTCTTCTTCCTCCTaGACCAGTTGTACAATCGGA | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLSSSSS*TSCTIG Trigger: TCCGATTGTACAACTGGTTCAGGAGGAAGAAGAGGA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAATTGTGTCCACTGTGTaGTTTATCAAATGCCCCTGG | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEIVSTV*FIKCPW Trigger: CCAGGGGCATTTGATAAATCACACAGTGGACACAAT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATCTCCTTGTTTCCTTTaGTTATGTCATGCAGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKESPCFL*LCHAGS Trigger: CGAGCCTGCATGACATAATCAAAGGAAACAAGGAGA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAGGATCACCACCGTCTTaGTCACTCACTGAAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEGSPPS*SLTETF Trigger: AAAAGTTTCAGTGAGTGAGCAAGACGGTGGTGATCC...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACGGCTTCCGGATTAGCTaGCAAAATTTTGGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYGFRIS*QNFGTT Trigger: TGTGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCC...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTAACAAGGCTCTCTGGTaGACTGACAAAAGCAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLNKALW*TDKSRL Trigger: CAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATTTCACTTCAGGCAATaGAGGATCCATAACTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEFHFRQ*RIHNWS Trigger: ACTCCAGTTATGGATCCTTCATTGCCTGAAGTGAAA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTGACACATTCTCTATATaGTGGCCAACAAGGCTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLDTFSI*WPTRLS Trigger: AGAGAGCCTTGTTGGCCAGCATATAGAGAATGTGTC...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAATCAAATGCCCCTGGTaGACACTACTTAAATCATCC | + |
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Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEIKCPW*TLLKSS Trigger: GGATGATTTAAGTAGTGTGCACCAGGGGCATTTGAT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACACATTCTCTATATGCTaGCCAACAAGGCTCTCTGGT | + |
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Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYTFSIC*PTRLSG Trigger: ACCAGAGAGCCTTGTTGGCCAGCATATAGAGAATGT...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAACACACTTTCACCCTCTaGCACAGTGGCTGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKHTFTL*HSGCVH Trigger: ATGAACACAGCCACTGTGCCAGAGGGTGAAAGTGTG...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAAACTTTCCTTGGTCTTaGACTTTAGATCGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKENFPWS*TLDRLR Trigger: ACGAAGGCGATCTAAAGTCCAAGACCAAGGAAAGTT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAAGACTCAAACCAGGATaGCGACTCATCCTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKRLKPG*RLILLF Trigger: GAACAAGAGGATGAGTCGTCATCCTGGTTTGAGTCT...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAAATACTGACTCCTTCTaGTTTGATCCATGCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKENTDSF*FDPCTR Trigger: TCTTGTGCATGGATCAAATCAGAAGGAGTCAGTATT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTAGGGTGCAATGGATCTaGAGGCTTTATTGTCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLRVQWI*RLYCLN Trigger: ATTGAGACAATAAAGCCTGCAGATCCATTGCACCCT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTGTGTTCATAGGTGGTaGTACTACTGTTTCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLCVHRW*YYCFRE Trigger: TTCCCTGAAACAGTAGTACCACCACCTATGAACACA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACAGGGTCAGTTTCTCCTaGTTTTGTATAATCAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYRVSFS*FCIIRA Trigger: AGCTCTGATTATACAAAACCAGGAGAAACTGACCCT...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAAAAGGGTCACTGTAGATaGACTCGCTTCCTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKKGHCR*TRFLFF Trigger: GAAGAAGAGGAAGCGAGTCCATCTACAGTGACCCTT...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACTTTCTTCTTTTTCTCTaGAGAGAACTTGAGGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYFLLFL*RELEGF Trigger: GAACCCCTCAAGTTCTCTCCAGAGAAAAAGAAGAAA...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTCAAATTGTTTCACTTaGATTGGCTCACAGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLSNCFT*IGSQSS Trigger: TGAACTCTGTGAGCCAATTCAAGTGAAACAATTTGA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTATAAAACCAAAGACATaGCAAGGTAACTCTGACGAT | + |
|
Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLIKPKT*QGNSDD Trigger: ATCGTCAGAGTTACCTTGTCATGTCTTTGGTTTTAT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAGTCTTCACTTCCTATTaGACAATTATCATCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEVFTSY*TIIILR Trigger: TCTCAAGATGATAATTGTGCAATAGGAAGTGAAGAC...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACACTGGAGTCACTGTATaGTTTAGTGTATCAGCTATA | + |
|
Preference number: 4 (lower is better) Translates to: DHGKPGLGDVKIWRISVYTGVTV*FSVSAI Trigger: TATAGCTGATACACTAAAGCATACAGTGACTCCAGT...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATGGAACTATTTTCAATaGTTTCACTGCCTACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEWNYFQ*FHCLQL Trigger: TAGTTGTAGGCAGTGAAACCATTGAAAATAGTTCCA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACCACTCATCAAATGTTaGTATATCTTCTGGATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEPLIKC*YIFWIF Trigger: AAAGATCCAGAAGATATACCAACATTTGATGAGTGG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACGCTCATCTCTACCATaGAAAGTACCCAGCTTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKRSSLP*KVPSLI Trigger: GATTAAGCTGGGTACTTTCCATGGTAGAGATGAGCG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATCCAGGGGAAAACTTTaGACATTCCGCTCATCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKSRGKL*TFRSSL Trigger: TAGAGATGAGCGGAATGTCCAAAGTTTTCCCCTGGA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACTGGAAGACTCTTCATaGAAATCAACTGTAGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLEDSS*KSTVGS Trigger: ACTCCCTACAGTTGATTTGCATGAAGAGTCTTCCAG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAATCTTTGCCAGTAAACTaGAGAGATTTGGATCTGATG | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKSLPVN*RDLDLM Trigger: CATCAGATCCAAATCTCTGCAGTTTACTGGCAAAGA...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAATGTTGGTATATCTTCTaGATCTTTGGGACTTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKCWYIF*IFGTCD Trigger: GTCACAAGTCCCAAAGATCCAGAAGATATACCAACA...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAGTTCAGTTGTGGCAGTaGCATTCTCAGATATACTTT | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKVQLWQ*HSQIYF Trigger: AAAGTATATCTGAGAATGCCACTGCCACAACTGAAC...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTTAGAAAAATCTCTCTaGTTCGTAAAGGGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLLEKSL*FVKGFL Trigger: AAGAAAGCCCTTTACGAACCAGAGAGATTTTTCTAA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATGCCTACAACTACACTaGAAGACTCTTCATGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKCLQLH*KTLHAN Trigger: ATTTGCATGAAGAGTCTTCCAGTGTAGTTGTAGGCA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAAAGTTTGAGGGTAGCTTaGTTCAAGTTCAATTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKSLRVA*FKFNCV Trigger: GACACAATTGAACTTGAACCAAGCTACCCTCAAACT...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR TCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATTAGGGCTTGGATACTaGTTACTTTTGGGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLGLGY*LLLGSF Trigger: AAAACTTCCCAAAAGTAATCAGTATCCAAGCCCTAA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACATCTTCACGTATTTTaGATACATCTGTTCATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKHLHVF*IHLFIQ Trigger: CTGGATGAACAGATGTATGCAAAATACGTGAAGATG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAATTGTACAAGCTGAAATaGCACAAAAATAGGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKLYKLK*HKNRTL Trigger: AAGAGTCCTATTTTTGTGGCATTTCAGCTTGTACAA...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR GCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACTTAAAGGACAAAAGTaGTCTGATCCAAAATGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLKGQK*SDPKCD Trigger: ATCACATTTTGGATCAGAGCACTTTTGTCCTTTAAG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CCA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATTTATTAACTTTCCTTaGTCTTGGACTTTAGATCGC | + |
|
Preference number: 4 (lower is better) Translates to: SLKHISLSLIPVQSHIKKFINFP*SWTLDR Trigger: GCGATCTAAAGTCCAAGACCAAGGAAAGTTAATAAA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 90 bp | GCCAACAAGGCTCTCTGGTGGACTGACAAAAGCAGGTTGTTCCACTaGAGCATCTGCATCAGGAGCCTCCCCAGCATCACAGTCAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ANKALWWTDKSRLFH*SICIRSLPSITVSF Trigger: GAAGCTGACTGTGATGCTGGGGAGGCTCCTGATGCAGATGCTCCAGTGGAACAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS CCA 90 bp | GGTTTCCACACTTTCACCCTCTGGCACAGTGGCTGTGTTCATAGGTaGTGGTACTACTGTTTCAGGGAACTTGGTGACAACTTCTGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GFHTFTLWHSGCVHR*WYYCFRELGDNFCG Trigger: TCCACAGAAGTTGTCACCAAGTTCCCTGAAACAGTAGTACCACCACCTATGAACACAGCCACTGTGCCAGAGGGTGAAAGTGTGGAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS TCA 90 bp | CCCAAAAGGGTCACTGTAGATGGACTCGCTTCCTCTTCTTCCTCCTaGACCAGTTGTACAATCGGACTCTCTTTTGGAGGATCTGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKRVTVDGLASSSSS*TSCTIGLSFGGSEV Trigger: AACCTCAGATCCTCCAAAAGAGAGTCCGATTGTACAACTGGTTCAGGAGGAAGAAGAGGAAGCGAGTCCATCTACAGTGACCCTTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 90 bp | CAGTTTCAGCTTCTCTTTCCATGTTCTCGCTATCCACATCGCCACTaGGAGGCTGCGGTACTGAAACCTCTACTGATTCTACAGGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QFQLLFPCSRYPHRH*EAAVLKPLLILQEV Trigger: TACTTCCTGTAGAATCAGTAGAGGTTTCAGTACCGCAGCCTCCCAGTGGCGATGTGGATAGCGAGAACATGGAAAGAGAAGCTGAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 90 bp | TGCCACAAAAATAGGACTCTTCTGACTGTGATGAAGTTTCCGAGCTaGCCTCAGACGGAGGGCCCTTGTAAGAAGAGTGATAAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: CHKNRTLLTVMKFPS*PQTEGPCKKSDKLL Trigger: GAGAAGTTTATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGCAGCTCGGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 90 bp | ATTCTGCTACAGTTGCTGATAGGTTTGAAACAAGCTGTGTCATGTTaGTCAGTTGTGCCTGGAGCAAGTGGATGGCTTCAGTTTGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLQLLIGLKQAVSC*SVVPGASGWLQFAA Trigger: AGCGGCAAACTGAAGCCATCCACTTGCTCCAGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 90 bp | CCAAATGCTCCCACGGTGATCTCCTTGTTTCCTTTGATTATGTCATaGAGGCTCGGCAATGACCCCGACTTAGTCTGTATAAGAGCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: PNAPTVISLFPLIMS*RLGNDPDLVCIRAF Trigger: AAAAGCTCTTATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTGTGGATGGCTTCAGTTaGCCGCTGATCCTGCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLVDGFS*PLILLF Trigger: GAAGAGCAGGATCAGCGGCAAACTGAAGCCATCCAC...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTACAAGCTGTGTCATGTaGGTCAGTTGTGCCTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLTSCVM*VSCAWS Trigger: GCTCCAGGCACAACTGACCAACATGACACAGCTTGT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACAATCGGACTCTCTTTaGGAGGATCTGAGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEQSDSL*EDLRLM Trigger: CATCAACCTCAGATCCTCCAAAAGAGAGTCCGATTG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACACAGTCCTGCTGCGTaGTCGATAAAGAGCAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEHSPAA*SIKSNS Trigger: AGAATTGCTCTTTATCGACAACGCAGCAGGACTGTG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACAGTAGTTCGACAGCGTaGCATACAGAGCATCAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DHGKPGLGDVKIWRISVYSSSTA*HTEHQS Trigger: GGACTGATGCTCTGTATGCAACGCTGTCGAACTACT...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATTCTCTGGAGAGAACTaGAGGGGTTCTACGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEFSGEN*RGSTMY Trigger: GTACATCGTAGAACCCCTCAAGTTCTCTCCAGAGAA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 90 bp | GCATACAGAGCATCAGTCCCAAGACAACACATAAAACCAAAGACATaGCAAGGTAACTCTGACGATCTGAAACCTCCCGCTTTAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYRASVPRQHIKPKT*QGNSDDLKPPALIL Trigger: CAGAATTAAAGCGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCTTTGGTTTTATGTGTTGTCTTGGGACTGATGCTCTGTATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS GCA 90 bp | TTTGTTACTTTTTCTTTGCCGTGTGAAGATGACACATTCTCTATATaGTGGCCAACAAGGCTCTCTGGTGGACTGACAAAAGCAGGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVTFSLPCEDDTFSI*WPTRLSGGLTKAGC Trigger: ACAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATAGAGAATGTGTCATCTTCACACGGCAAAGAAAAAGTAACAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS GCA 90 bp | TTGTCTTTTGGGTCTGTCCATTGCACAGACTTGTACAAGCTGAAATaGCACAAAAATAGGACTCTTCTGACTGTGATGAAGTTTCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSFGSVHCTDLYKLK*HKNRTLLTVMKFPS Trigger: GCTCGGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGTACAAGTCTGTGCAATGGACAGACCCAAAAGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATTCCTCCTGAACCAGTaGTACAATCGGACTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEFLLNQ*YNRTLF Trigger: AAAGAGAGTCCGATTGTACAACTGGTTCAGGAGGAA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAAGACTGAGAAAGAGTTaGAGGGTAGCTTGGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKERLRKS*RVAWFK Trigger: CTTGAACCAAGCTACCCTCAAACTCTTTCTCAGTCT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTACTGTTTCAGGGAACTaGGTGACAACTTCTGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLTVSGN*VTTSVE Trigger: CTCCACAGAAGTTGTCACCAAGTTCCCTGAAACAGT...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACGTCCATTGCACAGACTaGTACAAGCTGAAATGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DHGKPGLGDVKIWRISVYVHCTD*YKLKCH Trigger: GTGGCATTTCAGCTTGTACAAGTCTGTGCAATGGAC...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACTCAGTTTTTGTCTTTaGGGTCTGTCCATTGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKELSFCL*GLSIAQ Trigger: CTGTGCAATGGACAGACCCAAAAGACAAAAACTGAG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CCA 90 bp | TGTTCATCCAGGGGAAAACTTTGGACATTCCGCTCATCTCTACCATaGAAAGTACCCAGCTTAATCCATTTATTTGTGGGATATCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: CSSRGKLWTFRSSLP*KVPSLIHLFVGYLS Trigger: TGACAGATATCCCACAAATAAATGGATTAAGCTGGGTACTTTCCATGGTAGAGATGAGCGGAATGTCCAAAGTTTTCCCCTGGATGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000192570.2 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAGAGTTTGAGGGTAGCTaGGTTCAAGTTCAATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEEFEGS*VQVQLC Trigger: ACACAATTGAACTTGAACCAAGCTACCCTCAAACTC...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAACTGCATTTCTTCCATTaGTTTGCGGTACCTTTGACT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKELHFFH*FAVPLT Trigger: AGTCAAAGGTACCGCAAACAAATGGAAGAAATGCAG...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAGTAATCTCCATCAAATaGAGAAGTAGTTCGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEVISIK*RSSSTA Trigger: CGCTGTCGAACTACTTCTCAATTTGATGGAGATTAC...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATTCGGATCTACTTCTTaGCCAGTAAACTGCAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEFGSTS*PVNCRD Trigger: ATCTCTGCAGTTTACTGGCAAAGAAGTAGATCCGAA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CCA 90 bp | TTCCATAACTTTCTTCTTCCACTCATCAAATGTTGGTATATCTTCTaGATCTTTGGGACTTGTGACAGATGTAGGGTCAGTTTCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FHNFLLPLIKCWYIF*IFGTCDRCRVSFSW Trigger: CCAGGAGAAACTGACCCTACATCTGTCACAAGTCCCAAAGATCCAGAAGATATACCAACATTTGATGAGTGGAAGAAGAAAGTTATGGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTCGTTGTTTCCAAATCTaGTACATCCACAGTGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLRCFQI*YIHSVV Trigger: GACTACACTGTGGATGTACAAGATTTGGAAACAACG...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAATCCAGGGGAAAACTTaGGACATTCCGCTCATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKIQGKT*DIPLIS Trigger: AGAGATGAGCGGAATGTCCAAAGTTTTCCCCTGGAT...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GACCATGGAAAACCTGGTCTTGGTGATGTGAAAATTTGGAGGATTAGTGTTTACCTGACTCCTTCTGATTaGATCCATGCACAAGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: DHGKPGLGDVKIWRISVYLTPSD*IHAQDF Trigger: GAAATCTTGTGCATGGATCAAATCAGAAGGAGTCAG...GTAAACACTAATCCTCCAAATTTTCACATCACCAAGACCAGGTTTTCCATGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATGTCATGTTGGTCAGTaGTGCCTGGAGCAAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKCHVGQ*CLEQVD Trigger: ATCCACTTGCTCCAGGCACAACTGACCAACATGACA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTGGAGGCTTAACTTCGTaGTTTCCAAATCTTGTACAT | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLGGLTS*FPNLVH Trigger: ATGTACAAGATTTGGAAACAACGAAGTTAAGCCTCC...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAATCCACTTCACCTGGCTaGGCTATAGATAAAGTACCA | + |
|
Preference number: 5 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKSTSPG*AIDKVP Trigger: TGGTACTTTATCTATAGCCAAGCCAGGTGAAGTGGA...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAATCCACTCATCAAATGTaGGTATATCTTCTGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKESTHQM*VYLLDL Trigger: AAGATCCAGAAGATATACCAACATTTGATGAGTGGA...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAATCAAATTGTTTCACTaGAATTGGCTCACAGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKEIKLFH*NWLTEF Trigger: GAACTCTGTGAGCCAATTCAAGTGAAACAATTTGAT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TATTTTATCCCTCCCCCTGAACCCTTCAAATACCACAGGCTGTTCTTCAAAGAAACATCTTCACGTATTTaGCATACATCTGTTCATCCA | + |
|
Preference number: 5 (lower is better) Translates to: YFIPPPEPFKYHRLFFKETSSRI*HTSVHP Trigger: TGGATGAACAGATGTATGCAAAATACGTGAAGATGT...TTCTTTGAAGAACAGCCTGTGGTATTTGAAGGGTTCAGGGGGAGGGATAAAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS GCA 90 bp | ATCTCTCTGGTTCGTAAAGGGCTTTCTTCCTTTTATATCTCCATTTaGTATAGGGTGCAATGGATCTGCAGGCTTTATTGTCTCAATTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISLVRKGLSSFYISI*YRVQWICRLYCLNF Trigger: AAAATTGAGACAATAAAGCCTGCAGATCCATTGCACCCTATAGCAAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTGAGAATAGTATGATGTaGAAGCTGAAGAACTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLENSMM*KLKNSL Trigger: AAGAGAGTTCTTCAGCTTCAACATCATACTATTCTC...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTGTCTTCACTTCCTATaGCACAATTATCATCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLCLHFL*HNYHLE Trigger: CTCAAGATGATAATTGTGCAATAGGAAGTGAAGACA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTGTGTATGGACTTCCTaGATTACATATTCAGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLCVWTS*ITYSGD Trigger: ATCACCTGAATATGTAATCAAGGAAGTCCATACACA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GAATCTTCTCTCATTAAAGGTCTGAGACTTTGCCGCTTAGTTTTCTTCCCTCTTTTGGTTCAAGTTCAATaGTGTCCACTGTGTGATTTA | + |
|
Preference number: 5 (lower is better) Translates to: ESSLIKGLRLCRLVFFPLLVQVQ*CPLCDL Trigger: TAAATCACACAGTGGACACAATTGAACTTGAACCAA...AAGAGGGAAGAAAACTAAGCGGCAAAGTCTCAGACCTTTAATGAGAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATTGTTTGCGGTACCTTaGACTAAGCTCCTCCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKLFAVP*TKLLQI Trigger: TATCTGGAGGAGCTTAGTCAAAGGTACCGCAAACAA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAACAGTTGCTGATAGGTTaGAAACAAGCTGTGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKQLLIG*KQAVSC Trigger: ACATGACACAGCTTGTTTCAAACCTATCAGCAACTG...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAGTAAACTGCAGAGATTaGGATCTGATGAGGGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKVNCRD*DLMRGN Trigger: ATTTCCCCTCATCAGATCCAAATCTCTGCAGTTTAC...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACCCTCTTCTCAGTTTTaGTCTTTTGGGTCTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKPSSQF*SFGSVH Trigger: ATGGACAGACCCAAAAGACAAAAACTGAGAAGAGGG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | GATCTGCATCTTACTAAATATCAGAACTGTCTGCTTAGAGTCTGCAAAGGTAAAATCTCCTTGTTTCCTTaGATTATGTCATGCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DLHLTKYQNCLLRVCKGKISLFP*IMSCRL Trigger: GAGCCTGCATGACATAATCAAAGGAAACAAGGAGAT...TTTACCTTTGCAGACTCTAAGCAGACAGTTCTGATATTTAGTAAGATGCAGATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAACCCACGGTGATCTCCTaGTTTCCTTTGATTATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKPTVIS*FPLIMS Trigger: TGACATAATCAAAGGAAACAAGGAGATCACCGTGGG...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 90 bp | TTTACTCACAGTCCTGCTGCGTTGTCGATAAAGAGCAATTCTAACTaGGCACCATTTATATATGTACTCCGAAAAACTAGAAATACAACA | + |
|
Preference number: 5 (lower is better) Translates to: FTHSPAALSIKSNSN*APFIYVLRKTRNTT Trigger: TGTTGTATTTCTAGTTTTTCGGAGTACATATATAAATGGTGCTCAGTTAGAATTGCTCTTTATCGACAACGCAGCAGGACTGTGAGTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 90 bp | GCACCATTTATATATGTACTCCGAAAAACTAGAAATACAACAAATTaGAGTCAGCTCACTACAAAGTATGTGTGTCTCAGACTCAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: APFIYVLRKTRNTTN*SQLTTKYVCLRLKP Trigger: TGGTTTGAGTCTGAGACACACATACTTTGTAGTGAGCTGACTTCAATTTGTTGTATTTCTAGTTTTTCGGAGTACATATATAAATGGTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 90 bp | AAGGCTTTAATACGATTATTAAGCCTCATAAATACTGACTCCTTCTaGTTTGATCCATGCACAAGATTTCCATTACCATATCCCAGATCA | + |
|
Preference number: 5 (lower is better) Translates to: KALIRLLSLINTDSF*FDPCTRFPLPYPRS Trigger: TGATCTGGGATATGGTAATGGAAATCTTGTGCATGGATCAAATCAGAAGGAGTCAGTATTTATGAGGCTTAATAATCGTATTAAAGCCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATTTGTTACTTTTTCTTaGCCGTGTGAAGATGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKFVTFS*PCEDDT Trigger: TGTGTCATCTTCACACGGCAAAGAAAAAGTAACAAA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAAACACATATCACTTTCACTCATCCCTGTACAATCACACATCAAGAAATCCACCTTTATGTACTaGATGAACATCTTCACGTAT | + |
|
Preference number: 5 (lower is better) Translates to: SLKHISLSLIPVQSHIKKSTFMY*MNIFTY Trigger: ATACGTGAAGATGTTCATCAAGTACATAAAGGTGGA...TTTCTTGATGTGTGATTGTACAGGGATGAGTGAAAGTGATATGTGTTTTAGAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CAA 90 bp | TATATGCTGGCCAACAAGGCTCTCTGGTGGACTGACAAAAGCAGGTaGTTCCACTGGAGCATCTGCATCAGGAGCCTCCCCAGCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: YMLANKALWWTDKSR*FHWSICIRSLPSIT Trigger: TGTGATGCTGGGGAGGCTCCTGATGCAGATGCTCCAGTGGAACAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
||
| CDS CAA 72 bp | ACCCCAAATGCTCCCACGGTGATCTCCTTGTTTCCTTaGATTATGTCATGCAGGCTCGGCAATGACCCCGAC | + |
|
Preference number: 6 (lower is better) Translates to: TPNAPTVISLFP*IMSCRLGNDPD Trigger: GTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CCA 72 bp | CTCTTGTTCACCACTGCCCAAAAGGGTCACTGTAGATaGACTCGCTTCCTCTTCTTCCTCCTGAACCAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LLFTTAQKGHCR*TRFLFFLLNQL Trigger: CAACTGGTTCAGGAGGAAGAAGAGGAAGCGAGTCCATCTACAGTGACCCTTTTGGGCAGTGGTGAACAAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CAA 90 bp | ACTGCTGTAACCCCAAATGCTCCCACGGTGATCTCCTTGTTTCCTTaGATTATGTCATGCAGGCTCGGCAATGACCCCGACTTAGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: TAVTPNAPTVISLFP*IMSCRLGNDPDLVC Trigger: ACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGGAGCATTTGGGGTTACAGCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 72 bp | TCTCTATATGCTGGCCAACAAGGCTCTCTGGTGGACTaGCAAAAGCAGGTTGTTCCACTGGAGCATCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: SLYAGQQGSLVD*QKQVVPLEHLH Trigger: ATGCAGATGCTCCAGTGGAACAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATAGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
||
| CDS GCA 72 bp | AATAGGACTCTTCTGACTGTGATGAAGTTTCCGAGCTaGCCTCAGACGGAGGGCCCTTGTAAGAAGAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: NRTLLTVMKFPS*PQTEGPCKKSD Trigger: ATCACTCTTCTTACAAGGGCCCTCCGTCTGAGGGCAGCTCGGAAACTTCATCACAGTCAGAAGAGTCCTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CCA 72 bp | CACATTCTCTATATGCTGGCCAACAAGGCTCTCTGGTaGACTGACAAAAGCAGGTTGTTCCACTGGAGCATC | + |
|
Preference number: 6 (lower is better) Translates to: HILYMLANKALW*TDKSRLFHWSI Trigger: GATGCTCCAGTGGAACAACCTGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATAGAGAATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
||
| CDS CCA 72 bp | TTCACCCTCTGGCACAGTGGCTGTGTTCATAGGTGGTaGTACTACTGTTTCAGGGAACTTGGTGACAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: FTLWHSGCVHRW*YYCFRELGDNF Trigger: GAAGTTGTCACCAAGTTCCCTGAAACAGTAGTACCACCACCTATGAACACAGCCACTGTGCCAGAGGGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS TCA 72 bp | GTCACTGTAGATGGACTCGCTTCCTCTTCTTCCTCCTaGACCAGTTGTACAATCGGACTCTCTTTTGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VTVDGLASSSSS*TSCTIGLSFGG Trigger: TCCTCCAAAAGAGAGTCCGATTGTACAACTGGTTCAGGAGGAAGAAGAGGAAGCGAGTCCATCTACAGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS GCA 72 bp | CCCACGGTGATCTCCTTGTTTCCTTTGATTATGTCATaGAGGCTCGGCAATGACCCCGACTTAGTCTGTATA | + |
|
Preference number: 6 (lower is better) Translates to: PTVISLFPLIMS*RLGNDPDLVCI Trigger: TATACAGACTAAGTCGGGGTCATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAGGAGATCACCGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CCA 72 bp | CAGTTGCTGATAGGTTTGAAACAAGCTGTGTCATGTTaGTCAGTTGTGCCTGGAGCAAGTGGATGGCTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QLLIGLKQAVSC*SVVPGASGWLQ Trigger: CTGAAGCCATCCACTTGCTCCAGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
||
| CDS CAA 90 bp | TCCCCAGCATCACAGTCAGCTTCAGGCTGCTCCACTTCACCTGGCTaGGCTATAGATAAAGTACCAGACTTTTCTACTTCATCAAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SPASQSASGCSTSPG*AIDKVPDFSTSSSS Trigger: AGAGCTTGATGAAGTAGAAAAGTCTGGTACTTTATCTATAGCCAAGCCAGGTGAAGTGGAGCAGCCTGAAGCTGACTGTGATGCTGGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | AATTCTGCTACAGTTGCTGATAGGTTTGAAACAAGCTGTGTCATGTaGGTCAGTTGTGCCTGGAGCAAGTGGATGGCTTCAGTTTGCCGC | + |
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Preference number: 6 (lower is better) Translates to: NSATVADRFETSCVM*VSCAWSKWMASVCR Trigger: GCGGCAAACTGAAGCCATCCACTTGCTCCAGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 72 bp | GATGTTGAAGCTGAAGAACTCTCTTTACAGCAAACATaGCAACTCGGAAGCCAGACTAGAGAGCAGAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: DVEAEELSLQQT*QLGSQTREQRE Trigger: CTCTCTCTGCTCTCTAGTCTGGCTTCCGAGTTGGCATGTTTGCTGTAAAGAGAGTTCTTCAGCTTCAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 72 bp | AAGAATAGCAGATGTGCTCTTGGCTTCCGGATTAGCTaGCAAAATTTTGGCACCACACTCCACAGAGGCATA | + |
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Preference number: 6 (lower is better) Translates to: KNSRCALGFRIS*QNFGTTLHRGI Trigger: TATGCCTCTGTGGAGTGTGGTGCCAAAATTTTGGCAGCTAATCCGGAAGCCAAGAGCACATCTGCTATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000192570.2 |
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| CDS CCA 72 bp | TCTTTGCCGTGTGAAGATGACACATTCTCTATATGCTaGCCAACAAGGCTCTCTGGTGGACTGACAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: SLPCEDDTFSIC*PTRLSGGLTKA Trigger: TGCTTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATAGAGAATGTGTCATCTTCACACGGCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS CAA 72 bp | ACAGTTGCTGATAGGTTTGAAACAAGCTGTGTCATGTaGGTCAGTTGTGCCTGGAGCAAGTGGATGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: TVADRFETSCVM*VSCAWSKWMAS Trigger: TGAAGCCATCCACTTGCTCCAGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | GATCTGAAACCTCCCGCTTTAATTCTGCTACAGTTGCTGATAGGTTaGAAACAAGCTGTGTCATGTTGGTCAGTTGTGCCTGGAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: DLKPPALILLQLLIG*KQAVSCWSVVPGAS Trigger: ACTTGCTCCAGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAATTAAAGCGGGAGGTTTCAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS TCA 72 bp | GCATCAGTCCCAAGACAACACATAAAACCAAAGACATaGCAAGGTAACTCTGACGATCTGAAACCTCCCGCT | + |
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Preference number: 6 (lower is better) Translates to: ASVPRQHIKPKT*QGNSDDLKPPA Trigger: AGCGGGAGGTTTCAGATCGTCAGAGTTACCTTGTCATGTCTTTGGTTTTATGTGTTGTCTTGGGACTGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | TCACAGTCAGCTTCAGGCTGCTCCACTTCACCTGGCTaGGCTATAGATAAAGTACCAGACTTTTCTACTTCA | + |
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Preference number: 6 (lower is better) Translates to: SQSASGCSTSPG*AIDKVPDFSTS Trigger: TGAAGTAGAAAAGTCTGGTACTTTATCTATAGCCAAGCCAGGTGAAGTGGAGCAGCCTGAAGCTGACTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | GTCACTGTATGCTTTAGTGTATCAGCTATACTAGGTTaGGTTTCCACACTTTCACCCTCTGGCACAGTGGCT | + |
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Preference number: 6 (lower is better) Translates to: VTVCFSVSAILG*VSTLSPSGTVA Trigger: AGCCACTGTGCCAGAGGGTGAAAGTGTGGAAACCAAACCTAGTATAGCTGATACACTAAAGCATACAGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | CCTCCCGCTTTAATTCTGCTACAGTTGCTGATAGGTTaGAAACAAGCTGTGTCATGTTGGTCAGTTGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: PPALILLQLLIG*KQAVSCWSVVP Trigger: AGGCACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAATTAAAGCGGGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | GAAGAGACTGAGAAAGAGTTTGAGGGTAGCTTGGTTCAAGTTCAATaGTGTCCACTGTGTGATTTATCAAATGCCCCTGGTGCACACTAC | + |
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Preference number: 6 (lower is better) Translates to: EETEKEFEGSLVQVQ*CPLCDLSNAPGAHY Trigger: GTAGTGTGCACCAGGGGCATTTGATAAATCACACAGTGGACACAATTGAACTTGAACCAAGCTACCCTCAAACTCTTTCTCAGTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | ACAGTGGCTGTGTTCATAGGTGGTGGTACTACTGTTTCAGGGAACTaGGTGACAACTTCTGTGGAGAGTATGTCTTCTTTCACAGTATTG | + |
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Preference number: 6 (lower is better) Translates to: TVAVFIGGGTTVSGN*VTTSVESMSSFTVL Trigger: CAATACTGTGAAAGAAGACATACTCTCCACAGAAGTTGTCACCAAGTTCCCTGAAACAGTAGTACCACCACCTATGAACACAGCCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | GGTAACTCTGACGATCTGAAACCTCCCGCTTTAATTCTGCTACAGTaGCTGATAGGTTTGAAACAAGCTGTGTCATGTTGGTCAGTTGTG | + |
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Preference number: 6 (lower is better) Translates to: GNSDDLKPPALILLQ*LIGLKQAVSCWSVV Trigger: CACAACTGACCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAATTAAAGCGGGAGGTTTCAGATCGTCAGAGTTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 72 bp | TTTTCTTTGCCGTGTGAAGATGACACATTCTCTATATaGTGGCCAACAAGGCTCTCTGGTGGACTGACAAAA | + |
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Preference number: 6 (lower is better) Translates to: FSLPCEDDTFSI*WPTRLSGGLTK Trigger: TTTTGTCAGTCCACCAGAGAGCCTTGTTGGCCAGCATATAGAGAATGTGTCATCTTCACACGGCAAAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS GCA 72 bp | GGGTCTGTCCATTGCACAGACTTGTACAAGCTGAAATaGCACAAAAATAGGACTCTTCTGACTGTGATGAAG | + |
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Preference number: 6 (lower is better) Translates to: GSVHCTDLYKLK*HKNRTLLTVMK Trigger: CTTCATCACAGTCAGAAGAGTCCTATTTTTGTGGCATTTCAGCTTGTACAAGTCTGTGCAATGGACAGACCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | GTGTTCATAGGTGGTGGTACTACTGTTTCAGGGAACTaGGTGACAACTTCTGTGGAGAGTATGTCTTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VFIGGGTTVSGN*VTTSVESMSSF Trigger: GAAAGAAGACATACTCTCCACAGAAGTTGTCACCAAGTTCCCTGAAACAGTAGTACCACCACCTATGAACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | GACGATCTGAAACCTCCCGCTTTAATTCTGCTACAGTaGCTGATAGGTTTGAAACAAGCTGTGTCATGTTGG | + |
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Preference number: 6 (lower is better) Translates to: DDLKPPALILLQ*LIGLKQAVSCW Trigger: CCAACATGACACAGCTTGTTTCAAACCTATCAGCAACTGTAGCAGAATTAAAGCGGGAGGTTTCAGATCGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | ATAACTGGAGTCACTGTATGCTTTAGTGTATCAGCTATACTAGGTTaGGTTTCCACACTTTCACCCTCTGGCACAGTGGCTGTGTTCATA | + |
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Preference number: 6 (lower is better) Translates to: ITGVTVCFSVSAILG*VSTLSPSGTVAVFI Trigger: TATGAACACAGCCACTGTGCCAGAGGGTGAAAGTGTGGAAACCAAACCTAGTATAGCTGATACACTAAAGCATACAGTGACTCCAGTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS TCA 72 bp | ACCTCTACTGATTCTACAGGAAGTAGTAGTGATGGCTaGGGTGGCACAAAATCTTTTCCTTTACTCACAGTC | + |
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Preference number: 6 (lower is better) Translates to: TSTDSTGSSSDG*GGTKSFPLLTV Trigger: GACTGTGAGTAAAGGAAAAGATTTTGTGCCACCTCAGCCATCACTACTACTTCCTGTAGAATCAGTAGAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 72 bp | AGGGGAAAACTTTGGACATTCCGCTCATCTCTACCATaGAAAGTACCCAGCTTAATCCATTTATTTGTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RGKLWTFRSSLP*KVPSLIHLFVG Trigger: TCCCACAAATAAATGGATTAAGCTGGGTACTTTCCATGGTAGAGATGAGCGGAATGTCCAAAGTTTTCCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000192570.2 |
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| CDS CAA 72 bp | GAGAAAGAGTTTGAGGGTAGCTTGGTTCAAGTTCAATaGTGTCCACTGTGTGATTTATCAAATGCCCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: EKEFEGSLVQVQ*CPLCDLSNAPG Trigger: ACCAGGGGCATTTGATAAATCACACAGTGGACACAATTGAACTTGAACCAAGCTACCCTCAAACTCTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 72 bp | TCAGGCAATGAAGGATCCATAACTGGAGTCACTGTATaGTTTAGTGTATCAGCTATACTAGGTTTGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: SGNEGSITGVTV*FSVSAILGLVS Trigger: GGAAACCAAACCTAGTATAGCTGATACACTAAAGCATACAGTGACTCCAGTTATGGATCCTTCATTGCCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 72 bp | GGAGGATCTGAGGTTGATGGTTCTCTATCATGTGTATaGACTTCCTTGATTACATATTCAGGTGATGGAACA | + |
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Preference number: 6 (lower is better) Translates to: GGSEVDGSLSCV*TSLITYSGDGT Trigger: TGTTCCATCACCTGAATATGTAATCAAGGAAGTCCATACACATGATAGAGAACCATCAACCTCAGATCCTCC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | GGTTCTACGATGTACAAATCATTCGGATCTACTTCTTaGCCAGTAAACTGCAGAGATTTGGATCTGATGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSTMYKSFGSTS*PVNCRDLDLMR Trigger: CCTCATCAGATCCAAATCTCTGCAGTTTACTGGCAAAGAAGTAGATCCGAATGATTTGTACATCGTAGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | AACTTGAGGGGTTCTACGATGTACAAATCATTCGGATCTACTTCTTaGCCAGTAAACTGCAGAGATTTGGATCTGATGAGGGGAAATGAT | + |
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Preference number: 6 (lower is better) Translates to: NLRGSTMYKSFGSTS*PVNCRDLDLMRGND Trigger: ATCATTTCCCCTCATCAGATCCAAATCTCTGCAGTTTACTGGCAAAGAAGTAGATCCGAATGATTTGTACATCGTAGAACCCCTCAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 90 bp | ACTTTCTTCTTCCACTCATCAAATGTTGGTATATCTTCTGGATCTTaGGGACTTGTGACAGATGTAGGGTCAGTTTCTCCTGGTTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: TFFFHSSNVGISSGS*GLVTDVGSVSPGFV Trigger: TACAAAACCAGGAGAAACTGACCCTACATCTGTCACAAGTCCCAAAGATCCAGAAGATATACCAACATTTGATGAGTGGAAGAAGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS TCA 72 bp | TTCAGTTTGCCGCTGATCCTGCTCTTCTGCTATCCGTaGAGTATTCTGAAGCTTAACTATTGTCTTATTGAA | + |
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Preference number: 6 (lower is better) Translates to: FSLPLILLFCYP*SILKLNYCLIE Trigger: TTCAATAAGACAATAGTTAAGCTTCAGAATACTTCACGGATAGCAGAAGAGCAGGATCAGCGGCAAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS GCA 72 bp | GAAGTGTTTAATGCAGACTTCGGATCACCACCGTCTTaGTCACTCACTGAAACTTTTGATTCAAATTCTGAT | + |
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Preference number: 6 (lower is better) Translates to: EVFNADFGSPPS*SLTETFDSNSD Trigger: ATCAGAATTTGAATCAAAAGTTTCAGTGAGTGAGCAAGACGGTGGTGATCCGAAGTCTGCATTAAACACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS GCA 72 bp | GTTCGTAAAGGGCTTTCTTCCTTTTATATCTCCATTTaGTATAGGGTGCAATGGATCTGCAGGCTTTATTGT | + |
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Preference number: 6 (lower is better) Translates to: VRKGLSSFYISI*YRVQWICRLYC Trigger: ACAATAAAGCCTGCAGATCCATTGCACCCTATAGCAAATGGAGATATAAAAGGAAGAAAGCCCTTTACGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CCA 72 bp | TTTCTTCTTCCACTCATCAAATGTTGGTATATCTTCTaGATCTTTGGGACTTGTGACAGATGTAGGGTCAGT | + |
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Preference number: 6 (lower is better) Translates to: FLLPLIKCWYIF*IFGTCDRCRVS Trigger: ACTGACCCTACATCTGTCACAAGTCCCAAAGATCCAGAAGATATACCAACATTTGATGAGTGGAAGAAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048377.11 ENSMUST00000191975.2 |
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| CDS CAA 72 bp | GAGGTTGATGGTTCTCTATCATGTGTATGGACTTCCTaGATTACATATTCAGGTGATGGAACAGGAGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: EVDGSLSCVWTS*ITYSGDGTGVE Trigger: TTCAACTCCTGTTCCATCACCTGAATATGTAATCAAGGAAGTCCATACACATGATAGAGAACCATCAACCTC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS TCA 72 bp | AGGTTGATGGTTCTCTATCATGTGTATGGACTTCCTTaGTTACATATTCAGGTGATGGAACAGGAGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: RLMVLYHVYGLP*LHIQVMEQELK Trigger: TTTCAACTCCTGTTCCATCACCTGAATATGTAATCAAGGAAGTCCATACACATGATAGAGAACCATCAACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS TCA 72 bp | AGTCCTGCTGCGTTGTCGATAAAGAGCAATTCTAACTaGGCACCATTTATATATGTACTCCGAAAAACTAGA | + |
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Preference number: 6 (lower is better) Translates to: SPAALSIKSNSN*APFIYVLRKTR Trigger: TCTAGTTTTTCGGAGTACATATATAAATGGTGCTCAGTTAGAATTGCTCTTTATCGACAACGCAGCAGGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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| CDS CAA 72 bp | GATCCAAAATGTGATAGCAGCTCCACCTTTATGTACTaGATGAACATCTTCACGTATTTTGCATACATCTGT | + |
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Preference number: 6 (lower is better) Translates to: DPKCDSSSTFMY*MNIFTYFAYIC Trigger: ACAGATGTATGCAAAATACGTGAAGATGTTCATCAAGTACATAAAGGTGGAGCTGCTATCACATTTTGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048377.11 |
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